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Conserved domains on  [gi|2416254630|dbj|BDV00389|]
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adenylylsulfate reductase subunit alpha [Thermodesulfomicrobium sp. WS]

Protein Classification

adenylyl-sulfate reductase subunit alpha( domain architecture ID 11482448)

adenylyl-sulfate reductase subunit alpha is a key enzyme for dissimilatory sulfate reduction and sulfur oxidation

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK06854 PRK06854
adenylyl-sulfate reductase subunit alpha;
14-661 0e+00

adenylyl-sulfate reductase subunit alpha;


:

Pssm-ID: 235879 [Multi-domain]  Cd Length: 608  Bit Score: 1132.33  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  14 PLAEPELVELETDALIVGGGMGACGVAYEACRWADkhGVRVLLVDKAALERSGAVAQGLSAINTYLGKNE-PDDYVRMVR 92
Cdd:PRK06854    1 AMANPEVVEVDTDILIIGGGMAGCGAAFEAKEWAP--DLKVLIVEKANIKRSGAVAQGLSAINAYIGEGEtPEDYVRYVR 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  93 TDLMGLVREDLIFDLGRHVDDSVHLFEEWGLPCWIKKDGKnldgaeakkqgfslrkgdePVRSGRWQIMINGESYKCIVA 172
Cdd:PRK06854   79 KDLMGIVREDLVYDIARHVDSVVHLFEEWGLPIWKDENGK-------------------YVRRGRWQIMINGESYKPIVA 139
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 173 EAAKKALGeDRYMERVFIVKLLLDakvENRIAGAVGFSVRENKVYVIKANAICCACGGAVNVYRPRSTGEGMGRAWYPVW 252
Cdd:PRK06854  140 EAAKKALG-DNVLNRVFITDLLVD---DNRIAGAVGFSVRENKFYVFKAKAVIVATGGAAGIYRPRSPGEGRGRMWYPPF 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 253 NAGSTYTMCAQVGAEMTMMENRFVPARFKDGYGPVGAWFLLFKAKATNAKGEDYCVTNRAMLKPYedRGYAKGQVIPTCL 332
Cdd:PRK06854  216 NTGSGYAMGIRAGAEMTTFENRFIPLRFKDGYGPVGAWFLLFKAKAVNALGEEYEAKNAAELKKY--VPYADYKPIPTCL 293
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 333 RNHMMLREMREGRGPIYMDTATALQttfkeltpkeQKHLESEAWEDFLDMCVGQANLWACMNIKPEERGSEIMPTEPYLL 412
Cdd:PRK06854  294 RNYATVEENKAGRGPIYMDTEEALQ----------DKHLESELWEDFLDMTPGQALLWAAQNIEPEEENSEIMGTEPYIV 363
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 413 GSHSGCCGIWVSGPDEEWVPEeykvradNGKVYNRMTTVNGLFTCADGVGASGHKFSSGSHAEGRIVGKQMVRWCVDHKD 492
Cdd:PRK06854  364 GSHSGASGYWVSGPEDWVPEE-------YKWGYNRMTTVEGLFAAGDVVGGSPHKFSSGSFAEGRIAAKAAVRYILDNKD 436
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 493 FKPTLQLD-AEALKKEIYQPWYTYEQYKGASTDPVVNPNYITPHNFMMRLIKATDEYGGGVATLYTTSEKLLDTGFALLD 571
Cdd:PRK06854  437 EKPEIDDDqIEELKKEIYAPLERYEEFKDYSTDPDVNPNYISPEQLEERLQKIMDEYAGGISTNYTTNEKLLEIALELLE 516
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 572 MLEEDSKKLAARDLHELLRCWEQYHRLWTVRLHMQHIRFRQESRYPGFYYRADFMGIDDSKWKCFVNSKYDPKTGETTVF 651
Cdd:PRK06854  517 MLEEDSEKLAARDLHELMRCWELKHRLLVAEAHIRHLLFRKETRWPGYYERADYPGKDDENWKCFVNSRYDPGTGEWTIR 596
                         650
                  ....*....|
gi 2416254630 652 KRHYYQIIPD 661
Cdd:PRK06854  597 KLPYYQIIPE 606
 
Name Accession Description Interval E-value
PRK06854 PRK06854
adenylyl-sulfate reductase subunit alpha;
14-661 0e+00

adenylyl-sulfate reductase subunit alpha;


Pssm-ID: 235879 [Multi-domain]  Cd Length: 608  Bit Score: 1132.33  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  14 PLAEPELVELETDALIVGGGMGACGVAYEACRWADkhGVRVLLVDKAALERSGAVAQGLSAINTYLGKNE-PDDYVRMVR 92
Cdd:PRK06854    1 AMANPEVVEVDTDILIIGGGMAGCGAAFEAKEWAP--DLKVLIVEKANIKRSGAVAQGLSAINAYIGEGEtPEDYVRYVR 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  93 TDLMGLVREDLIFDLGRHVDDSVHLFEEWGLPCWIKKDGKnldgaeakkqgfslrkgdePVRSGRWQIMINGESYKCIVA 172
Cdd:PRK06854   79 KDLMGIVREDLVYDIARHVDSVVHLFEEWGLPIWKDENGK-------------------YVRRGRWQIMINGESYKPIVA 139
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 173 EAAKKALGeDRYMERVFIVKLLLDakvENRIAGAVGFSVRENKVYVIKANAICCACGGAVNVYRPRSTGEGMGRAWYPVW 252
Cdd:PRK06854  140 EAAKKALG-DNVLNRVFITDLLVD---DNRIAGAVGFSVRENKFYVFKAKAVIVATGGAAGIYRPRSPGEGRGRMWYPPF 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 253 NAGSTYTMCAQVGAEMTMMENRFVPARFKDGYGPVGAWFLLFKAKATNAKGEDYCVTNRAMLKPYedRGYAKGQVIPTCL 332
Cdd:PRK06854  216 NTGSGYAMGIRAGAEMTTFENRFIPLRFKDGYGPVGAWFLLFKAKAVNALGEEYEAKNAAELKKY--VPYADYKPIPTCL 293
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 333 RNHMMLREMREGRGPIYMDTATALQttfkeltpkeQKHLESEAWEDFLDMCVGQANLWACMNIKPEERGSEIMPTEPYLL 412
Cdd:PRK06854  294 RNYATVEENKAGRGPIYMDTEEALQ----------DKHLESELWEDFLDMTPGQALLWAAQNIEPEEENSEIMGTEPYIV 363
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 413 GSHSGCCGIWVSGPDEEWVPEeykvradNGKVYNRMTTVNGLFTCADGVGASGHKFSSGSHAEGRIVGKQMVRWCVDHKD 492
Cdd:PRK06854  364 GSHSGASGYWVSGPEDWVPEE-------YKWGYNRMTTVEGLFAAGDVVGGSPHKFSSGSFAEGRIAAKAAVRYILDNKD 436
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 493 FKPTLQLD-AEALKKEIYQPWYTYEQYKGASTDPVVNPNYITPHNFMMRLIKATDEYGGGVATLYTTSEKLLDTGFALLD 571
Cdd:PRK06854  437 EKPEIDDDqIEELKKEIYAPLERYEEFKDYSTDPDVNPNYISPEQLEERLQKIMDEYAGGISTNYTTNEKLLEIALELLE 516
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 572 MLEEDSKKLAARDLHELLRCWEQYHRLWTVRLHMQHIRFRQESRYPGFYYRADFMGIDDSKWKCFVNSKYDPKTGETTVF 651
Cdd:PRK06854  517 MLEEDSEKLAARDLHELMRCWELKHRLLVAEAHIRHLLFRKETRWPGYYERADYPGKDDENWKCFVNSRYDPGTGEWTIR 596
                         650
                  ....*....|
gi 2416254630 652 KRHYYQIIPD 661
Cdd:PRK06854  597 KLPYYQIIPE 606
aprA TIGR02061
adenosine phosphosulphate reductase, alpha subunit; During dissimilatory sulfate reduction or ...
26-659 0e+00

adenosine phosphosulphate reductase, alpha subunit; During dissimilatory sulfate reduction or sulfur oxidation, adenylylsulfate (APS) reductase catalyzes reversibly the two-electron reduction of APS to sulfite and AMP. Found in several bacterial lineages and in Archaeoglobales, APS reductase is a heterodimer composed of an alpha subunit containing a noncovalently bound FAD, and a beta subunit containing two [4Fe-4S] clusters. Described by this model is the alpha subunit of APS reductase, sharing common evolutionary origin with fumarate reductase/succinate dehydrogenase flavoproteins. [Central intermediary metabolism, Sulfur metabolism]


Pssm-ID: 273946 [Multi-domain]  Cd Length: 614  Bit Score: 1130.75  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  26 DALIVGGGMGACGVAYEACRWADKHGVRVLLVDKAALERSGAVAQGLSAINTYLG----KNEPDDYVRMVRTDLMGLVRE 101
Cdd:TIGR02061   1 DLLIVGGGMGGCGAAFEAVYWGDKKGLKIVLVEKANLERSGAVAQGLSAINTYLGtrfgENNAEDYVRYVRTDLMGLVRE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 102 DLIFDLGRHVDDSVHLFEEWGLPCWIK-KDGKnldgaeakkqgfslrkgdePVRSGRWQIMINGESYKCIVAEAAKKALG 180
Cdd:TIGR02061  81 DLIFDMARHVDDSVHLFEEWGLPLWIKpEDGK-------------------YVREGRWQIMIHGESYKPIVAEAAKNALG 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 181 EdrYMERVFIVKLLLDAKVENRIAGAVGFSVRENKVYVIKANAICCACGGAVNVYRPRSTGEGMGRAWYPVWNAGSTYTM 260
Cdd:TIGR02061 142 D--IFERIFIVKLLLDKNTPNRIAGAVGFNVRANEVHVFKAKTVIVAAGGAVNVYRPRSVGEGAGRAWYAVWNAGSTYTM 219
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 261 CAQVGAEMTMMENRFVPARFKDGYGPVGAWFLLFKAKATNAKGEDYCVTNRAMLKPYEDRGYAKGQVIPTCLRNHMMLRE 340
Cdd:TIGR02061 220 CAQAGAEMTQMENRFVPARFKDGYGPVGAWFLLFKAKATNGKGEEYCATNRAMLKPYEGRGYAKPHVIPTCLRNHMMLRE 299
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 341 MREGRGPIYMDTATALQTTFKElTPKEQKHLESEAWEDFLDMCVGQANLWACMNIKPEERGSEIMPTEPYLLGSHSGCCG 420
Cdd:TIGR02061 300 MREGRGPIYMDTKEALQDPFAT-DKKQQKHLEEEAWEDFLDMTVGQANLWAATNVDPEERGSEIMPTEPYLMGSHSGCCG 378
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 421 IWVSGPdEEWVPEEYKVRAdnGKVYNRMTTVNGLFTCADGVGASGHKFSSGSHAEGRIVGKQMVRWCVDHKDFKPTLQLD 500
Cdd:TIGR02061 379 IWVSGP-EDWVPEEYKVRA--AKVYNRMTTVEGLFTCGDGVGASPHKFSSGSFTEGRIAAKAAVRWILDHKDFKPEFDAT 455
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 501 AEALKKEIYQPWYTYEQYKGASTDPVVNPNYITPHNFMMRLIKATDEYGGGVATLYTTSEKLLDTGFALLDMLEEDSKKL 580
Cdd:TIGR02061 456 AEELKKEIYRPMENYEVYKNASTAPVVNPNYINPKQGLMRLQKCMDEYGGGVTTYYMTNEALLDTGLKLMAMLEEDLEKL 535
                         570       580       590       600       610       620       630
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2416254630 581 AARDLHELLRCWEQYHRLWTVRLHMQHIRFRQESRYPGFYYRADFMGIDDSKWKCFVNSKYDPKTGETTVFKRHYYQII 659
Cdd:TIGR02061 536 AARDLHELLRAWELYHRLWTVEAHMQHILFRKETRWPGYYYRADFLGLDDENWKCFVNSKYDPATGETTIEKKPYYQII 614
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
22-272 2.50e-16

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 81.80  E-value: 2.50e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  22 ELETDALIVGGGMGACGVAYEACRwadkHGVRVLLVDKAALERSG-AVAQG-LSAINTYLGKNEPDDYVRMVRTDLM--- 96
Cdd:COG1053     1 DHEYDVVVVGSGGAGLRAALEAAE----AGLKVLVLEKVPPRGGHtAAAQGgINAAGTNVQKAAGEDSPEEHFYDTVkgg 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  97 -GLVREDLIFDLGRHVDDSVHLFEEWGLPcWIKKDGKNLDGAEAKKQGFSLRKGDepvRSGRwqimingesykCIVAEAA 175
Cdd:COG1053    77 dGLADQDLVEALAEEAPEAIDWLEAQGVP-FSRTPDGRLPQFGGHSVGRTCYAGD---GTGH-----------ALLATLY 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 176 KKALGED-RYMERVFIVKLLLDakvENRIAGAVGFSvRENKVYVIKANAICCACGGAVNVYRPRSTGEGMGRAWYPVWNA 254
Cdd:COG1053   142 QAALRLGvEIFTETEVLDLIVD---DGRVVGVVARD-RTGEIVRIRAKAVVLATGGFGRNYEMRAEYLPEAEGALSTNAP 217
                         250       260
                  ....*....|....*....|.
gi 2416254630 255 GST---YTMCAQVGAEMTMME 272
Cdd:COG1053   218 GNTgdgIAMALRAGAALADME 238
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
26-413 2.64e-08

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 56.53  E-value: 2.64e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  26 DALIVGGGMGACGVAYEACRwadkHGVRVLLVDKAALERSGAV-AQGLSAINTYLGKNEPDDYVRMvRTDLMGLVRE--- 101
Cdd:pfam00890   1 DVLVIGGGLAGLAAALAAAE----AGLKVAVVEKGQPFGGATAwSSGGIDALGNPPQGGIDSPELH-PTDTLKGLDElad 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 102 -DLIFDLGRHVDDSVHLFEEWGLPcWIKKDGKNLDGAEAKKQGFSLRKGdePVRSGRWQIMINGesyKCIVAEAAKKALG 180
Cdd:pfam00890  76 hPYVEAFVEAAPEAVDWLEALGVP-FSRTEDGHLDLRPLGGLSATWRTP--HDAADRRRGLGTG---HALLARLLEGLRK 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 181 EDR-YMERVFIVKLLLDakvENRIAGAVGFSVRENKVYVIKAN-AICCACGGavnvyRPRSTGEGMGRAWY-----PVWN 253
Cdd:pfam00890 150 AGVdFQPRTAADDLIVE---DGRVTGAVVENRRNGREVRIRAIaAVLLATGG-----FGRLAELLLPAAGYadttnPPAN 221
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 254 AGSTYTMCAQVGAEMT---MMENRFVP-----------ARFKDGYGPVGAWFllfkakatNAKGEDYCVTnramLKPYED 319
Cdd:pfam00890 222 TGDGLALALRAGAALTddlMEFVQFHPtslvgirlgsgLLIEALRGEGGILV--------NKDGRRFMNE----LASRDV 289
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 320 RGYAkgqviptclrnhMMLREMREGRGP-IYMDT-----ATALQTTFkeltpkeqkhleseawEDFLDMCVGQAnlwacm 393
Cdd:pfam00890 290 VSRA------------ITRNEIDEGRGAnVYLDAsgsldAEGLEATL----------------PAINEEAIFGL------ 335
                         410       420
                  ....*....|....*....|
gi 2416254630 394 NIKPEERGSEIMPTEPYLLG 413
Cdd:pfam00890 336 DVDPYDRPIPVFPAQHYTMG 355
 
Name Accession Description Interval E-value
PRK06854 PRK06854
adenylyl-sulfate reductase subunit alpha;
14-661 0e+00

adenylyl-sulfate reductase subunit alpha;


Pssm-ID: 235879 [Multi-domain]  Cd Length: 608  Bit Score: 1132.33  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  14 PLAEPELVELETDALIVGGGMGACGVAYEACRWADkhGVRVLLVDKAALERSGAVAQGLSAINTYLGKNE-PDDYVRMVR 92
Cdd:PRK06854    1 AMANPEVVEVDTDILIIGGGMAGCGAAFEAKEWAP--DLKVLIVEKANIKRSGAVAQGLSAINAYIGEGEtPEDYVRYVR 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  93 TDLMGLVREDLIFDLGRHVDDSVHLFEEWGLPCWIKKDGKnldgaeakkqgfslrkgdePVRSGRWQIMINGESYKCIVA 172
Cdd:PRK06854   79 KDLMGIVREDLVYDIARHVDSVVHLFEEWGLPIWKDENGK-------------------YVRRGRWQIMINGESYKPIVA 139
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 173 EAAKKALGeDRYMERVFIVKLLLDakvENRIAGAVGFSVRENKVYVIKANAICCACGGAVNVYRPRSTGEGMGRAWYPVW 252
Cdd:PRK06854  140 EAAKKALG-DNVLNRVFITDLLVD---DNRIAGAVGFSVRENKFYVFKAKAVIVATGGAAGIYRPRSPGEGRGRMWYPPF 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 253 NAGSTYTMCAQVGAEMTMMENRFVPARFKDGYGPVGAWFLLFKAKATNAKGEDYCVTNRAMLKPYedRGYAKGQVIPTCL 332
Cdd:PRK06854  216 NTGSGYAMGIRAGAEMTTFENRFIPLRFKDGYGPVGAWFLLFKAKAVNALGEEYEAKNAAELKKY--VPYADYKPIPTCL 293
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 333 RNHMMLREMREGRGPIYMDTATALQttfkeltpkeQKHLESEAWEDFLDMCVGQANLWACMNIKPEERGSEIMPTEPYLL 412
Cdd:PRK06854  294 RNYATVEENKAGRGPIYMDTEEALQ----------DKHLESELWEDFLDMTPGQALLWAAQNIEPEEENSEIMGTEPYIV 363
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 413 GSHSGCCGIWVSGPDEEWVPEeykvradNGKVYNRMTTVNGLFTCADGVGASGHKFSSGSHAEGRIVGKQMVRWCVDHKD 492
Cdd:PRK06854  364 GSHSGASGYWVSGPEDWVPEE-------YKWGYNRMTTVEGLFAAGDVVGGSPHKFSSGSFAEGRIAAKAAVRYILDNKD 436
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 493 FKPTLQLD-AEALKKEIYQPWYTYEQYKGASTDPVVNPNYITPHNFMMRLIKATDEYGGGVATLYTTSEKLLDTGFALLD 571
Cdd:PRK06854  437 EKPEIDDDqIEELKKEIYAPLERYEEFKDYSTDPDVNPNYISPEQLEERLQKIMDEYAGGISTNYTTNEKLLEIALELLE 516
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 572 MLEEDSKKLAARDLHELLRCWEQYHRLWTVRLHMQHIRFRQESRYPGFYYRADFMGIDDSKWKCFVNSKYDPKTGETTVF 651
Cdd:PRK06854  517 MLEEDSEKLAARDLHELMRCWELKHRLLVAEAHIRHLLFRKETRWPGYYERADYPGKDDENWKCFVNSRYDPGTGEWTIR 596
                         650
                  ....*....|
gi 2416254630 652 KRHYYQIIPD 661
Cdd:PRK06854  597 KLPYYQIIPE 606
aprA TIGR02061
adenosine phosphosulphate reductase, alpha subunit; During dissimilatory sulfate reduction or ...
26-659 0e+00

adenosine phosphosulphate reductase, alpha subunit; During dissimilatory sulfate reduction or sulfur oxidation, adenylylsulfate (APS) reductase catalyzes reversibly the two-electron reduction of APS to sulfite and AMP. Found in several bacterial lineages and in Archaeoglobales, APS reductase is a heterodimer composed of an alpha subunit containing a noncovalently bound FAD, and a beta subunit containing two [4Fe-4S] clusters. Described by this model is the alpha subunit of APS reductase, sharing common evolutionary origin with fumarate reductase/succinate dehydrogenase flavoproteins. [Central intermediary metabolism, Sulfur metabolism]


Pssm-ID: 273946 [Multi-domain]  Cd Length: 614  Bit Score: 1130.75  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  26 DALIVGGGMGACGVAYEACRWADKHGVRVLLVDKAALERSGAVAQGLSAINTYLG----KNEPDDYVRMVRTDLMGLVRE 101
Cdd:TIGR02061   1 DLLIVGGGMGGCGAAFEAVYWGDKKGLKIVLVEKANLERSGAVAQGLSAINTYLGtrfgENNAEDYVRYVRTDLMGLVRE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 102 DLIFDLGRHVDDSVHLFEEWGLPCWIK-KDGKnldgaeakkqgfslrkgdePVRSGRWQIMINGESYKCIVAEAAKKALG 180
Cdd:TIGR02061  81 DLIFDMARHVDDSVHLFEEWGLPLWIKpEDGK-------------------YVREGRWQIMIHGESYKPIVAEAAKNALG 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 181 EdrYMERVFIVKLLLDAKVENRIAGAVGFSVRENKVYVIKANAICCACGGAVNVYRPRSTGEGMGRAWYPVWNAGSTYTM 260
Cdd:TIGR02061 142 D--IFERIFIVKLLLDKNTPNRIAGAVGFNVRANEVHVFKAKTVIVAAGGAVNVYRPRSVGEGAGRAWYAVWNAGSTYTM 219
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 261 CAQVGAEMTMMENRFVPARFKDGYGPVGAWFLLFKAKATNAKGEDYCVTNRAMLKPYEDRGYAKGQVIPTCLRNHMMLRE 340
Cdd:TIGR02061 220 CAQAGAEMTQMENRFVPARFKDGYGPVGAWFLLFKAKATNGKGEEYCATNRAMLKPYEGRGYAKPHVIPTCLRNHMMLRE 299
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 341 MREGRGPIYMDTATALQTTFKElTPKEQKHLESEAWEDFLDMCVGQANLWACMNIKPEERGSEIMPTEPYLLGSHSGCCG 420
Cdd:TIGR02061 300 MREGRGPIYMDTKEALQDPFAT-DKKQQKHLEEEAWEDFLDMTVGQANLWAATNVDPEERGSEIMPTEPYLMGSHSGCCG 378
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 421 IWVSGPdEEWVPEEYKVRAdnGKVYNRMTTVNGLFTCADGVGASGHKFSSGSHAEGRIVGKQMVRWCVDHKDFKPTLQLD 500
Cdd:TIGR02061 379 IWVSGP-EDWVPEEYKVRA--AKVYNRMTTVEGLFTCGDGVGASPHKFSSGSFTEGRIAAKAAVRWILDHKDFKPEFDAT 455
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 501 AEALKKEIYQPWYTYEQYKGASTDPVVNPNYITPHNFMMRLIKATDEYGGGVATLYTTSEKLLDTGFALLDMLEEDSKKL 580
Cdd:TIGR02061 456 AEELKKEIYRPMENYEVYKNASTAPVVNPNYINPKQGLMRLQKCMDEYGGGVTTYYMTNEALLDTGLKLMAMLEEDLEKL 535
                         570       580       590       600       610       620       630
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2416254630 581 AARDLHELLRCWEQYHRLWTVRLHMQHIRFRQESRYPGFYYRADFMGIDDSKWKCFVNSKYDPKTGETTVFKRHYYQII 659
Cdd:TIGR02061 536 AARDLHELLRAWELYHRLWTVEAHMQHILFRKETRWPGYYYRADFLGLDDENWKCFVNSKYDPATGETTIEKKPYYQII 614
PRK08275 PRK08275
putative oxidoreductase; Provisional
17-653 5.69e-39

putative oxidoreductase; Provisional


Pssm-ID: 181346 [Multi-domain]  Cd Length: 554  Bit Score: 151.36  E-value: 5.69e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  17 EPELVELETDALIVGGGMGACGVAYEAcRWADKhGVRVLLVDKAALERSGAVAQGLSAINTYL--GKNEPDDYVRMVRTD 94
Cdd:PRK08275    2 AMNTQEVETDILVIGGGTAGPMAAIKA-KERNP-ALRVLLLEKANVKRSGAISMGMDGLNNAVipGHATPEQYTKEITIA 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  95 LMGLVREDLIFDLGRHVDDSVHLFEEWGLPcwIKKDGKnldgaeakkqgfslrkGDEPVRS----GRWQI-MINGESYKC 169
Cdd:PRK08275   80 NDGIVDQKAVYAYAEHSFETIQQLDRWGVK--FEKDET----------------GDYAVKKvhhmGSYVLpMPEGHDIKK 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 170 IVAEAAKKAlgEDRYMERVFIVKLLLDAkvENRIAGAVGFSVRENKVYVIKANAICCACGGAVNVYRPrSTGEGMGRAWY 249
Cdd:PRK08275  142 VLYRQLKRA--RVLITNRIMATRLLTDA--DGRVAGALGFDCRTGEFLVIRAKAVILCCGAAGRLGLP-ASGYLFGTYEN 216
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 250 PVwNAGSTYTMCAQVGAEMTMMENRFVPARFKDGYGPVGAWFLL-FKAKATNAKGEDYCvtnramlkpyeDRGYAKGQvi 328
Cdd:PRK08275  217 PT-NAGDGYAMAYHAGAELANLECFQINPLIKDYNGPACAYVTGpLGGYTANAKGERFI-----------ECDYWSGQ-- 282
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 329 ptclrnhMML---REMREGRGPIYMDTatalqttfkeltpkeqKHLESEA---WEDFLDMCV----GQANLWACMNIKpe 398
Cdd:PRK08275  283 -------MMWefyQELQSGNGPVFLKL----------------DHLAEETiqtIETILHTNErpsrGRFHEGRGTDYR-- 337
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 399 ERGSEIMPTEPYLLGSHSGcCGIWVsgpDEewvpeeykvradngkvyNRMTTVNGLFTCADgVGASGHKFSSGSHAEGRI 478
Cdd:PRK08275  338 QQMVEMHISEIGFCSGHSA-SGVWV---NE-----------------KAETTVPGLYAAGD-MASVPHNYMLGAFTYGWF 395
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 479 VGKQMVRWCVDHkDFKPTLQLDAEALKKEIYQpwytyeqykgastdPVVNPNYITPHNFMMRLIKATDEYgggVATLYTT 558
Cdd:PRK08275  396 AGENAAEYVAGR-DLPEVDAAQVEAERARVLA--------------PLHREDGLPPAQVEYKLRRLVNDY---LQPPKVT 457
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 559 SEklLDTGFALLDMLEEDSKKLAARDLHELLRCWEqyhrlwtvrlhMQHIR-----------FRQESRYPGFYYRADFMG 627
Cdd:PRK08275  458 RK--MEIGLQRFAEIREDLERIKARDPHELMRALE-----------VSSIRdcaemaaraslFRTESRWGLYHYRVDFPE 524
                         650       660
                  ....*....|....*....|....*.
gi 2416254630 628 IDDSKWKCFVNSKYDpKTGETTVFKR 653
Cdd:PRK08275  525 RNDAEWFCHTHLRKD-EDGRMVSFKR 549
PRK13800 PRK13800
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
18-653 1.09e-20

fumarate reductase/succinate dehydrogenase flavoprotein subunit;


Pssm-ID: 237512 [Multi-domain]  Cd Length: 897  Bit Score: 97.23  E-value: 1.09e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  18 PEL---VELETDALIVGGGMGACGVAYEACrwadKHGVRVLLVDKAALERSGAVAQGLSAINTYL--GKNEPDDYVRMVR 92
Cdd:PRK13800    4 PALtdaLRLDCDVLVIGGGTAGTMAALTAA----EHGANVLLLEKAHVRHSGALAMGMDGVNNAVipGKAEPEDYVAEIT 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  93 TDLMGLVREDLIFDLGRHVDDSVHLFEEWGLpcwikKDGKNLDGAEAKKQGFslrkgdepvRSGRWQI-MINGESYKciv 171
Cdd:PRK13800   80 RANDGIVNQRTVYQTATRGFAMVQRLERYGV-----KFEKDEHGEYAVRRVH---------RSGSYVLpMPEGKDVK--- 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 172 aEAAKKALGEDRYMERVFIVKLLLDAKV---ENRIAGAVGFSVRENKVYVIKANAICCACGGAVNVYRPRStGEGMGRAW 248
Cdd:PRK13800  143 -KALYRVLRQRSMRERIRIENRLMPVRVlteGGRAVGAAALNTRTGEFVTVGAKAVILATGPCGRLGLPAS-GYLYGTYE 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 249 YPVwNAGSTYTMCAQVGAEMTMMENRFVPARFKDGYGPVGAWFL-LFKAKATNAKGEDYCvtnramlkpyeDRGYAKGQv 327
Cdd:PRK13800  221 NPT-NAGDGYSMAYHAGAELSGIECFQINPLIKDYNGPACAYVAnPFGGYQVNAQGERFV-----------DSDYWSGQ- 287
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 328 iptclrnhMML---REMREGRGPIYM-------DTATALQTTFKELTPKEQKHLESEAWEDFLDMCVGqanlwacMNIkp 397
Cdd:PRK13800  288 --------MMAevkREIESARGPIYLkvshlpeETLSALESILHTTERPTRGTFHANRGHDYRTHDIE-------MHI-- 350
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 398 eergSEIMptepyLLGSHSGcCGIWVsgpDEewvpeeykvradngkvyNRMTTVNGLFTCADgVGASGHKFSSGSHAEGR 477
Cdd:PRK13800  351 ----SEIG-----LCSGHSA-SGVWV---DE-----------------HARTTVPGLYAAGD-LACVPHNYMIGAFVFGD 399
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 478 IVGKQMVRWCvdhKDFKPTLQLDAEALKKE---IYQPWytyeQYKGASTDPVVNpnyitphnfmMRLIKATDEYgggVAT 554
Cdd:PRK13800  400 LAGAHAAGTL---AEVPAPGELPADQLAEAhelIYRPL----RHPDGPPQPQVE----------YKLRRFVNDY---VAP 459
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 555 LYTTSEklLDTGFALLDMLEEDSKKLAARDLHELLRCWEQYHRLWTVRLHMQHIRFRQESRYPGFYYRADFMGIDDSKWK 634
Cdd:PRK13800  460 PKTAAK--LSIAVETFERMAAEIAGMGARTPHELMRCAEVSFIRDCAEMAARSSLTRTESRWGLYHDRADLPERDDASWG 537
                         650
                  ....*....|....*....
gi 2416254630 635 CFVNSKYDPkTGETTVFKR 653
Cdd:PRK13800  538 YHLNLRKGD-DGEMEFLKR 555
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
22-272 2.50e-16

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 81.80  E-value: 2.50e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  22 ELETDALIVGGGMGACGVAYEACRwadkHGVRVLLVDKAALERSG-AVAQG-LSAINTYLGKNEPDDYVRMVRTDLM--- 96
Cdd:COG1053     1 DHEYDVVVVGSGGAGLRAALEAAE----AGLKVLVLEKVPPRGGHtAAAQGgINAAGTNVQKAAGEDSPEEHFYDTVkgg 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  97 -GLVREDLIFDLGRHVDDSVHLFEEWGLPcWIKKDGKNLDGAEAKKQGFSLRKGDepvRSGRwqimingesykCIVAEAA 175
Cdd:COG1053    77 dGLADQDLVEALAEEAPEAIDWLEAQGVP-FSRTPDGRLPQFGGHSVGRTCYAGD---GTGH-----------ALLATLY 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 176 KKALGED-RYMERVFIVKLLLDakvENRIAGAVGFSvRENKVYVIKANAICCACGGAVNVYRPRSTGEGMGRAWYPVWNA 254
Cdd:COG1053   142 QAALRLGvEIFTETEVLDLIVD---DGRVVGVVARD-RTGEIVRIRAKAVVLATGGFGRNYEMRAEYLPEAEGALSTNAP 217
                         250       260
                  ....*....|....*....|.
gi 2416254630 255 GST---YTMCAQVGAEMTMME 272
Cdd:COG1053   218 GNTgdgIAMALRAGAALADME 238
NadB COG0029
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ...
22-276 1.71e-10

Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 439800 [Multi-domain]  Cd Length: 521  Bit Score: 63.97  E-value: 1.71e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  22 ELETDALIVGGGMGACGVAYEACRwadkHGvRVLLVDKAALERSG-AVAQGlsAINTYLGKNE-PDDYVR---------- 89
Cdd:COG0029     2 RLKTDVLVIGSGIAGLSAALKLAE----RG-RVTLLTKGELGESNtRWAQG--GIAAVLDPGDsPELHIAdtlaagaglc 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  90 ---MVRTdlmgLVRE------DLI-----FDlgRHVDDSVHLfeewglpcwikkdgknldGAEAkkqGFS----LRKGDe 151
Cdd:COG0029    75 dpeAVRV----LVEEgperirELIelgvpFD--RDEDGELAL------------------TREG---GHSrrriLHAGD- 126
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 152 pvRSGRwQIMingesykcivaEAAKKALGED---RYMERVFIVKLLLDAkvENRIAGAVGFSVRENKVYVIKANAICCAC 228
Cdd:COG0029   127 --ATGR-EIE-----------RALLEAVRAHpniTVLENHFAVDLITDA--DGRCVGAYVLDEKTGEVETIRAKAVVLAT 190
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2416254630 229 GGAVNVYR-----PRSTGEGMGrawypvwnagstytMCAQVGAEMTMMEnrFV 276
Cdd:COG0029   191 GGAGQLYAyttnpDVATGDGIA--------------MAYRAGARLADME--FV 227
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
26-413 2.64e-08

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 56.53  E-value: 2.64e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  26 DALIVGGGMGACGVAYEACRwadkHGVRVLLVDKAALERSGAV-AQGLSAINTYLGKNEPDDYVRMvRTDLMGLVRE--- 101
Cdd:pfam00890   1 DVLVIGGGLAGLAAALAAAE----AGLKVAVVEKGQPFGGATAwSSGGIDALGNPPQGGIDSPELH-PTDTLKGLDElad 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 102 -DLIFDLGRHVDDSVHLFEEWGLPcWIKKDGKNLDGAEAKKQGFSLRKGdePVRSGRWQIMINGesyKCIVAEAAKKALG 180
Cdd:pfam00890  76 hPYVEAFVEAAPEAVDWLEALGVP-FSRTEDGHLDLRPLGGLSATWRTP--HDAADRRRGLGTG---HALLARLLEGLRK 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 181 EDR-YMERVFIVKLLLDakvENRIAGAVGFSVRENKVYVIKAN-AICCACGGavnvyRPRSTGEGMGRAWY-----PVWN 253
Cdd:pfam00890 150 AGVdFQPRTAADDLIVE---DGRVTGAVVENRRNGREVRIRAIaAVLLATGG-----FGRLAELLLPAAGYadttnPPAN 221
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 254 AGSTYTMCAQVGAEMT---MMENRFVP-----------ARFKDGYGPVGAWFllfkakatNAKGEDYCVTnramLKPYED 319
Cdd:pfam00890 222 TGDGLALALRAGAALTddlMEFVQFHPtslvgirlgsgLLIEALRGEGGILV--------NKDGRRFMNE----LASRDV 289
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 320 RGYAkgqviptclrnhMMLREMREGRGP-IYMDT-----ATALQTTFkeltpkeqkhleseawEDFLDMCVGQAnlwacm 393
Cdd:pfam00890 290 VSRA------------ITRNEIDEGRGAnVYLDAsgsldAEGLEATL----------------PAINEEAIFGL------ 335
                         410       420
                  ....*....|....*....|
gi 2416254630 394 NIKPEERGSEIMPTEPYLLG 413
Cdd:pfam00890 336 DVDPYDRPIPVFPAQHYTMG 355
sdhA PRK06263
succinate dehydrogenase flavoprotein subunit; Reviewed
22-272 8.79e-06

succinate dehydrogenase flavoprotein subunit; Reviewed


Pssm-ID: 235758 [Multi-domain]  Cd Length: 543  Bit Score: 48.82  E-value: 8.79e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  22 ELETDALIVGGGMGACGVAYEAcrwadKHGVRVLLVDKAALERSG--AVAQGlsaintylGKN---EPDDYVRMVRTDLM 96
Cdd:PRK06263    5 IMITDVLIIGSGGAGARAAIEA-----ERGKNVVIVSKGLFGKSGctVMAEG--------GYNavlNPEDSFEKHFEDTM 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  97 G----LVREDLIFDLGRHVDDSVHLFEEWGLPCWIKKDGKNldgAEAKKQGFSLRK----GDepvRSGRwQIMINGESYk 168
Cdd:PRK06263   72 KggayLNDPKLVEILVKEAPKRLKDLEKFGALFDRTEDGEI---AQRPFGGQSFNRtcyaGD---RTGH-EMMMGLMEY- 143
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630 169 cIVAEAAKKalgedryMERVFIVKLLLDakvENR-IAGAVGFSVRENKVYVIKANAICCACGGAVNVYrPRSTGegmgra 247
Cdd:PRK06263  144 -LIKERIKI-------LEEVMAIKLIVD---ENReVIGAIFLDLRNGEIFPIYAKATILATGGAGQLY-PITSN------ 205
                         250       260
                  ....*....|....*....|....*
gi 2416254630 248 wyPVWNAGSTYTMCAQVGAEMTMME 272
Cdd:PRK06263  206 --PIQKTGDGFAIAYRAGAELIDME 228
PRK09231 PRK09231
fumarate reductase flavoprotein subunit; Validated
183-248 2.84e-04

fumarate reductase flavoprotein subunit; Validated


Pssm-ID: 236421 [Multi-domain]  Cd Length: 582  Bit Score: 43.85  E-value: 2.84e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2416254630 183 RYMERvFIVKLLLDakvENRIAGAVGFSVRENKVYVIKANAICCACGGAVNVYRPRS-----TGEGMGRAW 248
Cdd:PRK09231  151 RFDEH-FVLDILVD---DGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTnggivTGDGMGMAY 217
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
24-131 4.73e-04

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 42.97  E-value: 4.73e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  24 ETDALIVGGG-MGACgVAYEACRwadkHGVRVLLVDKAALER--SGAvAQGLsaINTYLGKNEPDDYVRMVRtDLMGLVR 100
Cdd:COG0665     2 TADVVVIGGGiAGLS-TAYHLAR----RGLDVTVLERGRPGSgaSGR-NAGQ--LRPGLAALADRALVRLAR-EALDLWR 72
                          90       100       110
                  ....*....|....*....|....*....|.
gi 2416254630 101 EdlifdlgrhvddsvhLFEEWGLPCWIKKDG 131
Cdd:COG0665    73 E---------------LAAELGIDCDFRRTG 88
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
26-120 6.19e-04

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 42.38  E-value: 6.19e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2416254630  26 DALIVGGGMGACGVAYEACRwadkHGVRVLLVDKAALERSGA--VAQGLsaINTYLGKNEPDDYVRMVR--TDLMGLVRE 101
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYELAR----RGLSVTLLERGDDPGSGAsgRNAGL--IHPGLRYLEPSELARLALeaLDLWEELEE 74
                          90
                  ....*....|....*....
gi 2416254630 102 DLIFDLGRHVDDSVHLFEE 120
Cdd:pfam01266  75 ELGIDCGFRRCGVLVLARD 93
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
24-74 9.08e-03

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 38.77  E-value: 9.08e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2416254630  24 ETDALIVGGGMGacGVAyeACRWADKHGVRVLLVDKAALERSGAVAQGLSA 74
Cdd:COG0654     3 RTDVLIVGGGPA--GLA--LALALARAGIRVTVVERAPPPRPDGRGIALSP 49
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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