|
Name |
Accession |
Description |
Interval |
E-value |
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
246-503 |
5.65e-24 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 101.73 E-value: 5.65e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 246 NDYELALTELNEKSKNAPFNEFWNTTRARLYAKHGKFKLAIKEFDQLIKYvgNENNIDYLiYERATTFENAGLYDKAIED 325
Cdd:COG2956 22 GQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLER--DPDRAEAL-LELAQDYLKAGLLDRAEEL 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 326 YNYLIENDPTDAVVFSQRANAYRHAGEYQKSIQDLNVSMELDPEDYWNYYMRGWIYVEmLKENDKALEDFNTAVTLNPED 405
Cdd:COG2956 99 LEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLE-QGDYDEAIEALEKALKLDPDC 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 406 AYTRLMRGRLLLeKRNEKEKAIEDFNVIATLEKEIKEDGNCKQYALFHLDKKSEALQLMKDILEKYPSEGNYYEAACLYA 485
Cdd:COG2956 178 ARALLLLAELYL-EQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALELDPSDDLLLALADLLE 256
|
250
....*....|....*...
gi 2119751449 486 LMNKKEEALNALKTSFEK 503
Cdd:COG2956 257 RKEGLEAALALLERQLRR 274
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
39-294 |
8.30e-24 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 100.96 E-value: 8.30e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 39 GDNETALEYFEKDVVENPNSAYSHFYLSVLYVIQEKLEVAENHIDKALLYFPEssstmRSKAYVVKGDIAYKLKNIDNTF 118
Cdd:COG2956 22 GQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPD-----RAEALLELAQDYLKAGLLDRAE 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 119 KYYALAIQLRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKEKRYDLAEKKLTKAIQLNDL 198
Cdd:COG2956 97 ELLEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEAIEALEKALKLDPD 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 199 YYVALQLRAQTYFEQKKYKEAILDIVEVISIEPDDSDSRDQF--LTYSLNDYELALTELNEKSKNAPFNEFWNtTRARLY 276
Cdd:COG2956 177 CARALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLaeLYEKLGDPEEALELLRKALELDPSDDLLL-ALADLL 255
|
250
....*....|....*...
gi 2119751449 277 AKHGKFKLAIKEFDQLIK 294
Cdd:COG2956 256 ERKEGLEAALALLERQLR 273
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
35-540 |
1.25e-23 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 105.55 E-value: 1.25e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 35 AYSGGDNETALEYFEKDVVENPNSAYSHFYLSVLYVIQEKLEVAENHIDKALLYFPESSSTMRSKAYVvkgdiAYKLKNI 114
Cdd:TIGR02917 203 LLSLGNIELALAAYRKAIALRPNNIAVLLALATILIEAGEFEEAEKHADALLKKAPNSPLAHYLKALV-----DFQKKNY 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 115 DNTFKYYALAIQLRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKEKRYDLAEKKLTKAIQ 194
Cdd:TIGR02917 278 EDARETLQDALKSAPEYLPALLLAGASEYQLGNLEQAYQYLNQILKYAPNSHQARRLLASIQLRLGRVDEAIATLSPALG 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 195 LNDLYYVALQLRAQTYFEQKKYKEAILDIVEVISIEPDDSDSRDQ--FLTYSLNDYELALTELNEKSKNAPfnefwNTTR 272
Cdd:TIGR02917 358 LDPDDPAALSLLGEAYLALGDFEKAAEYLAKATELDPENAAARTQlgISKLSQGDPSEAIADLETAAQLDP-----ELGR 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 273 ARL-----YAKHGKFKLAIKEFDQLIKYVGNENNIDYLiyeRATTFENAGLYDKAIEDYNYLIENDPTDAVVFSQRANAY 347
Cdd:TIGR02917 433 ADLllilsYLRSGQFDKALAAAKKLEKKQPDNASLHNL---LGAIYLGKGDLAKAREAFEKALSIEPDFFPAAANLARID 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 348 RHAGEYQKSIQDLNVSMELDPEDywNYYMRGWIYVEMLKEN-DKALEDFNTAVTLNPEDAYTRLMRGRLLLEKRNEKeKA 426
Cdd:TIGR02917 510 IQEGNPDDAIQRFEKVLTIDPKN--LRAILALAGLYLRTGNeEEAVAWLEKAAELNPQEIEPALALAQYYLGKGQLK-KA 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 427 IEDFNVIATLEKEIKEDGNCKQYALFHLDKKSEALQLMKDILEKYPSEGN-YYEAACLYALMNKKEEALNALKTSFE-KG 504
Cdd:TIGR02917 587 LAILNEAADAAPDSPEAWLMLGRAQLAAGDLNKAVSSFKKLLALQPDSALaLLLLADAYAVMKNYAKAITSLKRALElKP 666
|
490 500 510
....*....|....*....|....*....|....*.
gi 2119751449 505 NNNFKHISIDDDLDNIKQTPEYISLYtKWFEKFKVE 540
Cdd:TIGR02917 667 DNTEAQIGLAQLLLAAKRTESAKKIA-KSLQKQHPK 701
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
39-520 |
5.38e-22 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 100.16 E-value: 5.38e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 39 GDNETALEYFEKDVVENPNSAYSHFYLSVLYVIQEKLEVAENHIDKA--LLYFPESSSTMRSKAYVVKGDIAyklKNIDN 116
Cdd:TIGR02917 36 NKYKAAIIQLKNALQKDPNDAEARFLLGKIYLALGDYAAAEKELRKAlsLGYPKNQVLPLLARAYLLQGKFQ---QVLDE 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 117 TFKYYALAiqlRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKEKRYDLAEKKLTKAIQLN 196
Cdd:TIGR02917 113 LPGKTLLD---DEGAAELLALRGLAYLGLGQLELAQKSYEQALAIDPRSLYAKLGLAQLALAENRFDEARALIDEVLTAD 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 197 DLYYVALQLRAQTYFEQKKYKEAILDIVEVISIEPDDSDSRDQFLT--YSLNDYELALTELNEKSKNAPFNEFWNTTRAR 274
Cdd:TIGR02917 190 PGNVDALLLKGDLLLSLGNIELALAAYRKAIALRPNNIAVLLALATilIEAGEFEEAEKHADALLKKAPNSPLAHYLKAL 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 275 LYAKHGKFKLAIKEFDQLIKYvgNENNIDYLIYERATTF-----ENAGLYDKAIEDYnylIENDPTDAVVFsqrANAYRH 349
Cdd:TIGR02917 270 VDFQKKNYEDARETLQDALKS--APEYLPALLLAGASEYqlgnlEQAYQYLNQILKY---APNSHQARRLL---ASIQLR 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 350 AGEYQKSIQDLNVSMELDPEDYWNYYMRGWIYVEmLKENDKALEDFNTAVTLNPEDA--YTRLMRGRLLLekrNEKEKAI 427
Cdd:TIGR02917 342 LGRVDEAIATLSPALGLDPDDPAALSLLGEAYLA-LGDFEKAAEYLAKATELDPENAaaRTQLGISKLSQ---GDPSEAI 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 428 EDFNVIATLEKEIKEDGncKQYALFHLDKKSE--ALQLMKDILEKYPSEGNYYE-AACLYALMNKKEEALNALKTSFEKG 504
Cdd:TIGR02917 418 ADLETAAQLDPELGRAD--LLLILSYLRSGQFdkALAAAKKLEKKQPDNASLHNlLGAIYLGKGDLAKAREAFEKALSIE 495
|
490 500
....*....|....*....|
gi 2119751449 505 NNNFKHIS----IDDDLDNI 520
Cdd:TIGR02917 496 PDFFPAAAnlarIDIQEGNP 515
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
24-468 |
5.99e-22 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 100.16 E-value: 5.99e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 24 AQSENYKIAyeAYSG-GDNETALEYFEKDVVENPNSAYSHFYLSVLYVIQEKLEVAENHIDKALLYFPESSSTMRSKAyv 102
Cdd:TIGR02917 465 ASLHNLLGA--IYLGkGDLAKAREAFEKALSIEPDFFPAAANLARIDIQEGNPDDAIQRFEKVLTIDPKNLRAILALA-- 540
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 103 vkgDIAYKLKNIDNTFKYYALAIQLRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKEKRY 182
Cdd:TIGR02917 541 ---GLYLRTGNEEEAVAWLEKAAELNPQEIEPALALAQYYLGKGQLKKALAILNEAADAAPDSPEAWLMLGRAQLAAGDL 617
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 183 DLAEKKLTKAIQLNDLYYVALQLRAQTYFEQKKYKEAILDIVEVISIEPDDSDSrdQFLTYSL----NDYELALTELNEK 258
Cdd:TIGR02917 618 NKAVSSFKKLLALQPDSALALLLLADAYAVMKNYAKAITSLKRALELKPDNTEA--QIGLAQLllaaKRTESAKKIAKSL 695
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 259 SKNAPFNEFWNTTRARLYAKHGKFKLAIKEFDQLIKYVGNENNIDYLiyerATTFENAGLYDKAIEDYNYLIENDPTDAV 338
Cdd:TIGR02917 696 QKQHPKAALGFELEGDLYLRQKDYPAAIQAYRKALKRAPSSQNAIKL----HRALLASGNTAEAVKTLEAWLKTHPNDAV 771
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 339 VFSQRANAYRHAGEYQKSIQDLNVSMELDPEDYWNYYMRGWIYVEmlKENDKALEDFNTAVTLNPEDAYTRLMRGRLLLE 418
Cdd:TIGR02917 772 LRTALAELYLAQKDYDKAIKHYQTVVKKAPDNAVVLNNLAWLYLE--LKDPRALEYAERALKLAPNIPAILDTLGWLLVE 849
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2119751449 419 KrNEKEKAIEDFNVIATLEKEIKEdgncKQY----ALFHLDKKSEALQLMKDIL 468
Cdd:TIGR02917 850 K-GEADRALPLLRKAVNIAPEAAA----IRYhlalALLATGRKAEARKELDKLL 898
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
59-333 |
7.02e-22 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 95.57 E-value: 7.02e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 59 AYSHFYLSVLYVIQEKLEVAENHIDKALLYFPESSstmrsKAYVVKGDIAYKLKNIDNTFKYYALAIQLRPKEIDLYLDR 138
Cdd:COG2956 8 ALGWYFKGLNYLLNGQPDKAIDLLEEALELDPETV-----EAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLEL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 139 GQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKEKRYDLAEKKLTKAIQLNDLYYVALQLRAQTYFEQKKYKE 218
Cdd:COG2956 83 AQDYLKAGLLDRAEELLEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDE 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 219 AILDIVEVISIEPDDSDSRDQ--FLTYSLNDYELALTELNEKSKNAPFNEFWNTTRARLYAKHGKFKLAIKEFDQLIKyv 296
Cdd:COG2956 163 AIEALEKALKLDPDCARALLLlaELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALE-- 240
|
250 260 270
....*....|....*....|....*....|....*..
gi 2119751449 297 gnENNIDYLIYERATTFENAGLYDKAIEDYNYLIEND 333
Cdd:COG2956 241 --LDPSDDLLLALADLLERKEGLEAALALLERQLRRH 275
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
307-498 |
5.21e-21 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 92.38 E-value: 5.21e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 307 YERATTFENAGLYDKAIEDYNYLIENDPTDAVVFSQRANAYRHAGEYQKSIQDLNVSMELDPEDYWNYYMRGWIYVEmLK 386
Cdd:COG0457 12 NNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNLGLALQA-LG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 387 ENDKALEDFNTAVTLNPEDAYTRLMRGRLLLEkRNEKEKAIEDFNVIATLEKEIKEDGNCKQYALFHLDKKSEALQLMKD 466
Cdd:COG0457 91 RYEEALEDYDKALELDPDDAEALYNLGLALLE-LGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYEEALELLEK 169
|
170 180 190
....*....|....*....|....*....|..
gi 2119751449 467 ILEKYPSEGNYYEAACLYALMNKKEEALNALK 498
Cdd:COG0457 170 LEAAALAALLAAALGEAALALAAAEVLLALLL 201
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
125-337 |
2.07e-20 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 90.45 E-value: 2.07e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 125 IQLRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKEKRYDLAEKKLTKAIQLNDLYYVALQ 204
Cdd:COG0457 1 LELDPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 205 LRAQTYFEQKKYKEAILDIVEVISIEPDDSDSRDQ--FLTYSLNDYELALTELNEKSKNAPFNEFWNTTRARLYAKHGKF 282
Cdd:COG0457 81 NLGLALQALGRYEEALEDYDKALELDPDDAEALYNlgLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRY 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2119751449 283 KLAIKEFDQLIKYVGNENNIDYLIYERATTFENAGLYDKAIEDYNYLIENDPTDA 337
Cdd:COG0457 161 EEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILT 215
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
100-333 |
3.06e-20 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 90.07 E-value: 3.06e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 100 AYVVKGDIAYKLKNIDNTFKYYALAIQLRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKE 179
Cdd:COG0457 10 AYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNLGLALQAL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 180 KRYDLAEKKLTKAIQLNDLYYVALQLRAQTYFEQKKYKEAILDIVEVISIEPDDSDSRDQF--LTYSLNDYELALTELNE 257
Cdd:COG0457 90 GRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLgiALEKLGRYEEALELLEK 169
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2119751449 258 KSKNAPFNEFWNTTRARLYAKHGKFKLAIKEFDQLIKYVGNENNIDYLIYERATTFENAGLYDKAIEDYNYLIEND 333
Cdd:COG0457 170 LEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLLLALALLLALRLAALALYQYRA 245
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
55-262 |
4.57e-20 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 89.68 E-value: 4.57e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 55 NPNSAYSHFYLSVLYVIQEKLEVAENHIDKALLYFPESSstmrsKAYVVKGDIAYKLKNIDNTFKYYALAIQLRPKEIDL 134
Cdd:COG0457 4 DPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDA-----EALYNLGLAYLRLGRYEEALADYEQALELDPDDAEA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 135 YLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKEKRYDLAEKKLTKAIQLNDLYYVALQLRAQTYFEQK 214
Cdd:COG0457 79 LNNLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLG 158
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2119751449 215 KYKEAILDIVEVISIEPDDSDSRDQFLTYSLNDYELALTELNEKSKNA 262
Cdd:COG0457 159 RYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQA 206
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
305-426 |
1.50e-19 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 87.66 E-value: 1.50e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 305 LIYERATTFENAGLYDKAIEDYNYLIENDPTDAVVFSQRANAYRHAGEYQKSIQDLNVSMELDPEDYWNYYMRGWIYvEM 384
Cdd:COG4785 75 LYYERGVAYDSLGDYDLAIADFDQALELDPDLAEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYAYLNRGIAL-YY 153
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 2119751449 385 LKENDKALEDFNTAVTLNPEDAYTRLMRGRLLLEKRNEKEKA 426
Cdd:COG4785 154 LGRYELAIADLEKALELDPNDPERALWLYLAERKLDPEKALA 195
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
272-494 |
1.84e-19 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 87.75 E-value: 1.84e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 272 RARLYAKHGKFKLAIKEFDQLIKYvgNENNIDYLiYERATTFENAGLYDKAIEDYNYLIENDPTDAVVFSQRANAYRHAG 351
Cdd:COG0457 14 LGLAYRRLGRYEEAIEDYEKALEL--DPDDAEAL-YNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNLGLALQALG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 352 EYQKSIQDLNVSMELDPEDYWNYYMRGWIYVEmLKENDKALEDFNTAVTLNPEDAYTRLMRGrLLLEKRNEKEKAIEDFN 431
Cdd:COG0457 91 RYEEALEDYDKALELDPDDAEALYNLGLALLE-LGRYDEAIEAYERALELDPDDADALYNLG-IALEKLGRYEEALELLE 168
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2119751449 432 VIATLEKEIKEDGNCKQYALFHLDKKSEALQLMKDILEKYPSEGNYYEAACLYALMNKKEEAL 494
Cdd:COG0457 169 KLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLLLALALLL 231
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
272-536 |
4.41e-19 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 87.48 E-value: 4.41e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 272 RARLYAKHGKFKLAIKEFDQLIKYvgNENNIDYLiYERATTFENAGLYDKAIEDYNYLIENDPTDAVVFSQRANAYRHAG 351
Cdd:COG2956 14 KGLNYLLNGQPDKAIDLLEEALEL--DPETVEAH-LALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 352 EYQKSIQDLNVSMELDPEDYWNYYMRGWIYvEMLKENDKALEDFNTAVTLNPEDAYTRLMRGRLLLEKrNEKEKAIEdfn 431
Cdd:COG2956 91 LLDRAEELLEKLLELDPDDAEALRLLAEIY-EQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQ-GDYDEAIE--- 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 432 viaTLEKEIKEDGNC----KQYALFHLDKK--SEALQLMKDILEKYPSEGNYYEA-ACLYALMNKKEEALNALKTSFEKG 504
Cdd:COG2956 166 ---ALEKALKLDPDCaralLLLAELYLEQGdyEEAIAALERALEQDPDYLPALPRlAELYEKLGDPEEALELLRKALELD 242
|
250 260 270
....*....|....*....|....*....|..
gi 2119751449 505 NNNFKHISIDDDLDNIKQTPEYISLYTKWFEK 536
Cdd:COG2956 243 PSDDLLLALADLLERKEGLEAALALLERQLRR 274
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
108-287 |
1.25e-17 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 81.89 E-value: 1.25e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 108 AYKLKNIDNTFKYYALAIQLRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKEKRYDLAEK 187
Cdd:COG4785 49 AAAALAAAALAAERIDRALALPDLAQLYYERGVAYDSLGDYDLAIADFDQALELDPDLAEAYNNRGLAYLLLGDYDAALE 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 188 KLTKAIQLNDLYYVALQLRAQTYFEQKKYKEAILDIVEVISIEPDDSD-SRDQFLTYSLNDYELALTELNEKSKNAPFNE 266
Cdd:COG4785 129 DFDRALELDPDYAYAYLNRGIALYYLGRYELAIADLEKALELDPNDPErALWLYLAERKLDPEKALALLLEDWATAYLLQ 208
|
170 180
....*....|....*....|.
gi 2119751449 267 FwNTTRARLYakhgkFKLAIK 287
Cdd:COG4785 209 G-DTEEAREL-----FKLALA 223
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
39-187 |
1.34e-17 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 86.20 E-value: 1.34e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 39 GDNETALEYFEKDVVENPNSAYSHFYLSVLYVIQEKLEVAENHIDKALLYFPESSStmrskAYVVKGDIAYKLKNIDNTF 118
Cdd:COG3914 92 GRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAE-----AYLNLGEALRRLGRLEEAI 166
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2119751449 119 KYYALAIQLRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKEKRYDLAEK 187
Cdd:COG3914 167 AALRRALELDPDNAEALNNLGNALQDLGRLEEAIAAYRRALELDPDNADAHSNLLFALRQACDWEVYDR 235
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
29-220 |
2.71e-17 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 82.08 E-value: 2.71e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 29 YKIAYEAYSGGDNETALEYFEKDVVENPNSAYSHFYLSVLYVIQEKLEVAENHIDKALLYFPESsstmrSKAYVVKGDIA 108
Cdd:COG2956 80 LELAQDYLKAGLLDRAEELLEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPEN-----AHAYCELAELY 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 109 YKLKNIDNTFKYYALAIQLRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKEKRYDLAEKK 188
Cdd:COG2956 155 LEQGDYDEAIEALEKALKLDPDCARALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALEL 234
|
170 180 190
....*....|....*....|....*....|..
gi 2119751449 189 LTKAIQLNDLYYVALQLrAQTYFEQKKYKEAI 220
Cdd:COG2956 235 LRKALELDPSDDLLLAL-ADLLERKEGLEAAL 265
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
330-498 |
7.31e-17 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 80.44 E-value: 7.31e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 330 IENDPTDAVVFSQRANAYRHAGEYQKSIQDLNVSMELDPEDYWNYYMRGWIYvEMLKENDKALEDFNTAVTLNPEDAYTR 409
Cdd:COG0457 1 LELDPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAY-LRLGRYEEALADYEQALELDPDDAEAL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 410 LMRGrLLLEKRNEKEKAIEDFNVIATLEKEIKEDGNCKQYALFHLDKKSEALQLMKDILEKYPSEGN-YYEAACLYALMN 488
Cdd:COG0457 80 NNLG-LALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADaLYNLGIALEKLG 158
|
170
....*....|
gi 2119751449 489 KKEEALNALK 498
Cdd:COG0457 159 RYEEALELLE 168
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
307-536 |
4.05e-16 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 78.62 E-value: 4.05e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 307 YERATTFENAGLYDKAIEDYNYLIENDPTDAVVFSQRANAYRHAGEYQKSIQDLNVSMELDPEDYWNYYMRGWIYVEMlK 386
Cdd:COG2956 12 YFKGLNYLLNGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKA-G 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 387 ENDKALEDFNTAVTLNPEDAYTRLMRGRLLLEKRNEkEKAIEdfnviaTLEKEIKEDGNCKQY------ALFHLDKKSEA 460
Cdd:COG2956 91 LLDRAEELLEKLLELDPDDAEALRLLAEIYEQEGDW-EKAIE------VLERLLKLGPENAHAycelaeLYLEQGDYDEA 163
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2119751449 461 LQLMKDILEKYP-SEGNYYEAACLYALMNKKEEALNALKTSFEKGNNNFKHI-SIDDDLDNIKQTPEYISLYTKWFEK 536
Cdd:COG2956 164 IEALEKALKLDPdCARALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALpRLAELYEKLGDPEEALELLRKALEL 241
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
100-233 |
6.85e-16 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 74.46 E-value: 6.85e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 100 AYVVKGDIAYKLKNIDNTFKYYALAIQLRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKE 179
Cdd:COG4783 6 ALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALLKA 85
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 2119751449 180 KRYDLAEKKLTKAIQLNDLYYVALQLRAQTYFEQKKYKEAILDIVEVISIEPDD 233
Cdd:COG4783 86 GDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
307-430 |
7.40e-16 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 74.46 E-value: 7.40e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 307 YERATTFENAGLYDKAIEDYNYLIENDPTDAVVFSQRANAYRHAGEYQKSIQDLNVSMELDPEDYWNYYMRGWIYVEmLK 386
Cdd:COG4783 8 YALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALLK-AG 86
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 2119751449 387 ENDKALEDFNTAVTLNPEDAYTRLMRGRlLLEKRNEKEKAIEDF 430
Cdd:COG4783 87 DYDEALALLEKALKLDPEHPEAYLRLAR-AYRALGRPDEAIAAL 129
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
29-222 |
9.93e-16 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 76.97 E-value: 9.93e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 29 YKIAYEAYSGGDNETALEYFEKDVVENPNSAYSHFYLSVLYVIQEKLEVAENHIDKALLYFPESsstmrSKAYVVKGDIA 108
Cdd:COG0457 12 NNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDD-----AEALNNLGLAL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 109 YKLKNIDNTFKYYALAIQLRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKEKRYDLAEKK 188
Cdd:COG0457 87 QALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYEEALEL 166
|
170 180 190
....*....|....*....|....*....|....
gi 2119751449 189 LTKAIQLNDLYYVALQLRAQTYFEQKKYKEAILD 222
Cdd:COG0457 167 LEKLEAAALAALLAAALGEAALALAAAEVLLALL 200
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
124-237 |
1.27e-15 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 73.50 E-value: 1.27e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 124 AIQLRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKEKRYDLAEKKLTKAIQLNDLYYVAL 203
Cdd:COG4235 9 ALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALALDPDNPEAL 88
|
90 100 110
....*....|....*....|....*....|....
gi 2119751449 204 QLRAQTYFEQKKYKEAILDIVEVISIEPDDSDSR 237
Cdd:COG4235 89 YLLGLAAFQQGDYAEAIAAWQKLLALLPADAPAR 122
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
107-241 |
1.53e-14 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 76.57 E-value: 1.53e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 107 IAYKLKNIDNTFKYYALAIQLRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKEKRYDLAE 186
Cdd:COG3914 87 LLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEALRRLGRLEEAI 166
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 2119751449 187 KKLTKAIQLNDLYYVALQLRAQTYFEQKKYKEAILDIVEVISIEPDDSDSRDQFL 241
Cdd:COG3914 167 AALRRALELDPDNAEALNNLGNALQDLGRLEEAIAAYRRALELDPDNADAHSNLL 221
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
99-208 |
4.23e-14 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 69.26 E-value: 4.23e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 99 KAYVVKGDIAYKLKNIDNTFKYYALAIQLRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLK 178
Cdd:COG4235 18 EGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALALDPDNPEALYLLGLAAFQ 97
|
90 100 110
....*....|....*....|....*....|
gi 2119751449 179 EKRYDLAEKKLTKAIQLNDLYYVALQLRAQ 208
Cdd:COG4235 98 QGDYAEAIAAWQKLLALLPADAPARLLEAS 127
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
272-405 |
5.88e-14 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 69.07 E-value: 5.88e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 272 RARLYAKHGKFKLAIKEFDQLIKYvgNENNIDYLiYERATTFENAGLYDKAIEDYNYLIENDPTDAVVFSQRANAYRHAG 351
Cdd:COG4783 10 LAQALLLAGDYDEAEALLEKALEL--DPDNPEAF-ALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALLKAG 86
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 2119751449 352 EYQKSIQDLNVSMELDPEDYWNYYMRGWIYvEMLKENDKALEDFNTAVTLNPED 405
Cdd:COG4783 87 DYDEALALLEKALKLDPEHPEAYLRLARAY-RALGRPDEAIAALEKALELDPDD 139
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
133-263 |
1.52e-13 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 67.91 E-value: 1.52e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 133 DLYLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKEKRYDLAEKKLTKAIQLNDLYYVALQLRAQTYFE 212
Cdd:COG4783 5 EALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALLK 84
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2119751449 213 QKKYKEAILDIVEVISIEPDDSDSRDQF--LTYSLNDYELALTELNEKSKNAP 263
Cdd:COG4783 85 AGDYDEALALLEKALKLDPEHPEAYLRLarAYRALGRPDEAIAALEKALELDP 137
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
121-307 |
2.70e-13 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 72.72 E-value: 2.70e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 121 YALAIQLRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKEKRYDLAEKKLTKAIQLNDLYY 200
Cdd:COG3914 67 AAAAAAALLLLAALLELAALLLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFA 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 201 VALQLRAQTYFEQKKYKEAILDIVEVISIEPDDSDSRDQ--FLTYSLNDYELALTELNEKSKNAPFNEFWNTTRARLYAK 278
Cdd:COG3914 147 EAYLNLGEALRRLGRLEEAIAALRRALELDPDNAEALNNlgNALQDLGRLEEAIAAYRRALELDPDNADAHSNLLFALRQ 226
|
170 180 190
....*....|....*....|....*....|.
gi 2119751449 279 HGKFKLAIKEFDQLIKYVGNENNID--YLIY 307
Cdd:COG3914 227 ACDWEVYDRFEELLAALARGPSELSpfALLY 257
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
120-354 |
8.39e-13 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 70.79 E-value: 8.39e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 120 YYALAIQLRPKEIDLYLDRGQYYFELGQLDKAEA---------DFKHILTIDASNIYAYGGLGRNYLKEKRYDLAEKKLT 190
Cdd:COG3914 23 AAELALAAELEAAALAAALGLALLLLAALAEAAAaallalaagEAAAAAAALLLLAALLELAALLLQALGRYEEALALYR 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 191 KAIQLNDLYYVALQLRAQTYFEQKKYKEAILDIVEVISIEPDDSdsrdqfltyslndyelaltelneksknapfnEFWNt 270
Cdd:COG3914 103 RALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFA-------------------------------EAYL- 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 271 TRARLYAKHGKFKLAIKEFDQLIKYvgNENNIDYLiYERATTFENAGLYDKAIEDYNYLIENDPTDAVVFSQRANAYRHA 350
Cdd:COG3914 151 NLGEALRRLGRLEEAIAALRRALEL--DPDNAEAL-NNLGNALQDLGRLEEAIAAYRRALELDPDNADAHSNLLFALRQA 227
|
....
gi 2119751449 351 GEYQ 354
Cdd:COG3914 228 CDWE 231
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
24-165 |
9.25e-13 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 65.60 E-value: 9.25e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 24 AQSENYKIAYEAYSGGDNETALEYFEKDVVENPNSAYSHFYLSVLYVIQEKLEVAENHIDKALLYFPESSStmrskAYVV 103
Cdd:COG4783 3 CAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPE-----ARLN 77
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2119751449 104 KGDIAYKLKNIDNTFKYYALAIQLRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTIDASN 165
Cdd:COG4783 78 LGLALLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
307-415 |
9.56e-13 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 65.41 E-value: 9.56e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 307 YERATTFENAGLYDKAIEDYNYLIENDPTDAVVFSQRANAYRHAGEYQKSIQDLNVSMELDPEDYWNYYMRGWIYvEMLK 386
Cdd:COG4235 21 LLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALALDPDNPEALYLLGLAA-FQQG 99
|
90 100
....*....|....*....|....*....
gi 2119751449 387 ENDKALEDFNTAVTLNPEDAYTRLMRGRL 415
Cdd:COG4235 100 DYAEAIAAWQKLLALLPADAPARLLEASI 128
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
141-232 |
1.19e-12 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 64.04 E-value: 1.19e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 141 YYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKEKRYDLAEkKLTKAIQLNDLYYVALQLRAQTYFEQKKYKEAI 220
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAI-ALEKALKLDPNNAEALLNLAELLLELGDYDEAL 79
|
90
....*....|..
gi 2119751449 221 LDIVEVISIEPD 232
Cdd:COG3063 80 AYLERALELDPS 91
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
29-223 |
1.85e-11 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 64.26 E-value: 1.85e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 29 YKIAYEAYSGGDNETALEYFEKDVVENPNSAYSHFYLSVLYVIQEKLEVAENHIDKALLYFPESSstmrsKAYVVKGDIA 108
Cdd:COG0457 46 YNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNLGLALQALGRYEEALEDYDKALELDPDDA-----EALYNLGLAL 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 109 YKLKNIDNTFKYYALAIQLRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKEKRYDLAEKK 188
Cdd:COG0457 121 LELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALL 200
|
170 180 190
....*....|....*....|....*....|....*
gi 2119751449 189 LTKAIQLNDLYYVALQLRAQTYFEQKKYKEAILDI 223
Cdd:COG0457 201 LALEQALRKKLAILTLAALAELLLLALALLLALRL 235
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
39-196 |
9.06e-11 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 62.82 E-value: 9.06e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 39 GDNETALEYFEKDVVENPNSAYSHFYLSVLYVIQEKLEVAENHIDKALLYFPESsstmrSKAYVVKGDIAYKLKNIDNTF 118
Cdd:COG2956 124 GDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEAIEALEKALKLDPDC-----ARALLLLAELYLEQGDYEEAI 198
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2119751449 119 KYYALAIQLRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTIDASNIyAYGGLGRNYLKEKRYDLAEKKLTKAIQLN 196
Cdd:COG2956 199 AALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALELDPSDD-LLLALADLLERKEGLEAALALLERQLRRH 275
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
137-400 |
1.00e-10 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 64.24 E-value: 1.00e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 137 DRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKEKRYDLAEKkltkAIQLNDLYYVALQLRAQTYFEQKKY 216
Cdd:COG3914 6 LLALAALAAAALLAAAAAAELALAAELEAAALAAALGLALLLLAALAEAAA----AALLALAAGEAAAAAAALLLLAALL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 217 KEAILDIVEvisiepddsdsrdqfltysLNDYELALT------ELNEKSKNAPFNefwnttRARLYAKHGKFKLAIKEFD 290
Cdd:COG3914 82 ELAALLLQA-------------------LGRYEEALAlyrralALNPDNAEALFN------LGNLLLALGRLEEALAALR 136
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 291 QLIKYvgNENNIDYLIYeRATTFENAGLYDKAIEDYNYLIENDPTDAVVFSQRANAYRHAGEYQKSIQDLNVSMELDPED 370
Cdd:COG3914 137 RALAL--NPDFAEAYLN-LGEALRRLGRLEEAIAALRRALELDPDNAEALNNLGNALQDLGRLEEAIAAYRRALELDPDN 213
|
250 260 270
....*....|....*....|....*....|....*...
gi 2119751449 371 YWNYYMR--------GWIYVEMLKENDKALEDFNTAVT 400
Cdd:COG3914 214 ADAHSNLlfalrqacDWEVYDRFEELLAALARGPSELS 251
|
|
| 3a0801s09 |
TIGR00990 |
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ... |
25-291 |
1.26e-10 |
|
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273380 [Multi-domain] Cd Length: 615 Bit Score: 63.85 E-value: 1.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 25 QSENYKIAYEAYSGGDNETALEYFEKDVVEN---PNSAYSHFYLSVLYVIQEKLEVAENHIDKALLYFPESSstmrsKAY 101
Cdd:TIGR00990 294 QLQLGLKSPESKADESYEEAARAFEKALDLGklgEKEAIALNLRGTFKCLKGKHLEALADLSKSIELDPRVT-----QSY 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 102 VVKGDIAYKLKNIDNTFKYYALAIQLRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKEKR 181
Cdd:TIGR00990 369 IKRASMNLELGDPDKAEEDFDKALKLNSEDPDIYYHRAQLHFIKGEFAQAGKDYQKSIDLDPDFIFSHIQLGVTQYKEGS 448
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 182 YDLAEKKLTKAIQLNDLYYVALQLRAQTYFEQKKYKEAILDIVEVISIEPDDSD---------SRDQFLTYSLNDYELAL 252
Cdd:TIGR00990 449 IASSMATFRRCKKNFPEAPDVYNYYGELLLDQNKFDEAIEKFDTAIELEKETKPmymnvlpliNKALALFQWKQDFIEAE 528
|
250 260 270
....*....|....*....|....*....|....*....
gi 2119751449 253 TELNEKSKNAPFNEFWNTTRARLYAKHGKFKLAIKEFDQ 291
Cdd:TIGR00990 529 NLCEKALIIDPECDIAVATMAQLLLQQGDVDEALKLFER 567
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
235-430 |
1.63e-10 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 63.86 E-value: 1.63e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 235 DSRDQFLTYSLNDYELALTELNEKSKNAPFNEFWNTTRARLYAKHGKFKLAIKEFDQLIKYVGNENNIDYLIYERattFE 314
Cdd:COG3914 13 AAAALLAAAAAAELALAAELEAAALAAALGLALLLLAALAEAAAAALLALAAGEAAAAAAALLLLAALLELAALL---LQ 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 315 NAGLYDKAIEDYNYLIENDPTDAVVFSQRANAYRHAGEYQKSIQDLNVSMELDPEDYWNYYMRGWIYvEMLKENDKALED 394
Cdd:COG3914 90 ALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEAL-RRLGRLEEAIAA 168
|
170 180 190
....*....|....*....|....*....|....*.
gi 2119751449 395 FNTAVTLNPEDAYTRLMRGRLLLEKRNEkEKAIEDF 430
Cdd:COG3914 169 LRRALELDPDNAEALNNLGNALQDLGRL-EEAIAAY 203
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
336-474 |
1.90e-10 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 59.05 E-value: 1.90e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 336 DAVVFSQRANAYRHAGEYQKSIQDLNVSMELDPEDYWNYYMRGWIYVEmLKENDKALEDFNTAVTLNPEDAYTRLMRGRL 415
Cdd:COG4783 3 CAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQ-LGDLDEAIVLLHEALELDPDEPEARLNLGLA 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 2119751449 416 LLeKRNEKEKAIEDFNVIATLEKEIKEDGNCKQYALFHLDKKSEALQLMKDILEKYPSE 474
Cdd:COG4783 82 LL-KAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| 3a0801s09 |
TIGR00990 |
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ... |
104-441 |
2.12e-10 |
|
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273380 [Multi-domain] Cd Length: 615 Bit Score: 63.46 E-value: 2.12e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 104 KGDIAYKLKNIDNTFKYYALAIQLRPKEIdLYLDRGQYYFELGQLDKAEADfkhiltidasniyaygglgrnylkekryd 183
Cdd:TIGR00990 133 KGNKAYRNKDFNKAIKLYSKAIECKPDPV-YYSNRAACHNALGDWEKVVED----------------------------- 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 184 laekkLTKAIQLNDLYYVALQLRAQTYFEQKKYKEAILDIVEVISIEPDDSDSRDQFLTYSLNDYelALTELNEKSKNAP 263
Cdd:TIGR00990 183 -----TTAALELDPDYSKALNRRANAYDGLGKYADALLDLTASCIIDGFRNEQSAQAVERLLKKF--AESKAKEILETKP 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 264 FNeFWNTTRARLYAKHGKFKLAIKEFD---QLIKYVGN----------ENNIDYLIYERATTFENA-------------- 316
Cdd:TIGR00990 256 EN-LPSVTFVGNYLQSFRPKPRPAGLEdsnELDEETGNgqlqlglkspESKADESYEEAARAFEKAldlgklgekeaial 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 317 ----------GLYDKAIEDYNYLIENDPTDAVVFSQRANAYRHAGEYQKSIQDLNVSMELDPEDYWNYYMRGWIYVeMLK 386
Cdd:TIGR00990 335 nlrgtfkclkGKHLEALADLSKSIELDPRVTQSYIKRASMNLELGDPDKAEEDFDKALKLNSEDPDIYYHRAQLHF-IKG 413
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 387 ENDKALEDFNTAVTLNPED----------------------AYTRLMR------------GRLLLEKrNEKEKAIEDFNV 432
Cdd:TIGR00990 414 EFAQAGKDYQKSIDLDPDFifshiqlgvtqykegsiassmaTFRRCKKnfpeapdvynyyGELLLDQ-NKFDEAIEKFDT 492
|
....*....
gi 2119751449 433 IATLEKEIK 441
Cdd:TIGR00990 493 AIELEKETK 501
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
321-430 |
4.42e-10 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 57.71 E-value: 4.42e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 321 KAIEDYNYLIENDPTDAVVFSQRANAYRHAGEYQKSIQDLNVSMELDPEDYWNYYMRGWIYVeMLKENDKALEDFNTAVT 400
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALL-AAGDTEEAEELLERALA 79
|
90 100 110
....*....|....*....|....*....|
gi 2119751449 401 LNPEDAYTRLMRGRLLLEkRNEKEKAIEDF 430
Cdd:COG4235 80 LDPDNPEALYLLGLAAFQ-QGDYAEAIAAW 108
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
243-370 |
7.69e-10 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 57.12 E-value: 7.69e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 243 YSLNDYELALTELNEKSKNAPFNEFWNTTRARLYAKHGKFKLAIKEFDQLIKYVGNEnniDYLIYERATTFENAGLYDKA 322
Cdd:COG4783 15 LLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDE---PEARLNLGLALLKAGDYDEA 91
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 2119751449 323 IEDYNYLIENDPTDAVVFSQRANAYRHAGEYQKSIQDLNVSMELDPED 370
Cdd:COG4783 92 LALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
55-194 |
1.20e-09 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 58.39 E-value: 1.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 55 NPNSAYSHFYLSVLYVIQEKLEVAENHIDKALLYFPESsstmrSKAYVVKGDIAYKLKNIDNTFKYYALAIQLRPKEIDL 134
Cdd:COG4785 69 LPDLAQLYYERGVAYDSLGDYDLAIADFDQALELDPDL-----AEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYA 143
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 135 YLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKeKRYDLAEKKLTKAIQ 194
Cdd:COG4785 144 YLNRGIALYYLGRYELAIADLEKALELDPNDPERALWLYLAERK-LDPEKALALLLEDWA 202
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
107-200 |
4.51e-09 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 53.64 E-value: 4.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 107 IAYKLKNIDNTFKYYALAIQLRPKEIDLYLDRGQYYFELGQLDKAEAdFKHILTIDASNIYAYGGLGRNYLKEKRYDLAE 186
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAIA-LEKALKLDPNNAEALLNLAELLLELGDYDEAL 79
|
90
....*....|....
gi 2119751449 187 KKLTKAIQLNDLYY 200
Cdd:COG3063 80 AYLERALELDPSAL 93
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
150-275 |
4.81e-09 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 54.63 E-value: 4.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 150 KAEADFKHILTIDASNIYAYGGLGRNYLKEKRYDLAEKKLTKAIQLNDLYYVALQLRAQTYFEQKKYKEAILDIVEVISI 229
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALAL 80
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 2119751449 230 EPDDSDSRDQ--FLTYSLNDYELALTELNEKSKNAPFNEFWNTTRARL 275
Cdd:COG4235 81 DPDNPEALYLlgLAAFQQGDYAEAIAAWQKLLALLPADAPARLLEASI 128
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
68-198 |
5.96e-09 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 54.97 E-value: 5.96e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 68 LYVIQEKLEVAENHIDKALLYFPESSSTMRSKAYVVKGDIAYKLKNIDNTFKYYALAIQLRPKEIDLYLDRGQYYFELGQ 147
Cdd:COG5010 24 VEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPNNPELYYNLALLYSRSGD 103
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 2119751449 148 LDKAEADFKHILTIDASNIYAYGGLGRNYLKEKRYDLAEKKLTKAIQLNDL 198
Cdd:COG5010 104 KDEAKEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRALGTSPL 154
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
120-231 |
9.81e-09 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 54.58 E-value: 9.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 120 YYALAIQLRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKEKRYDLAEKKLTKAIQLNDLY 199
Cdd:COG5010 42 LAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPNNPELYYNLALLYSRSGDKDEAKEYYEKALALSPDN 121
|
90 100 110
....*....|....*....|....*....|..
gi 2119751449 200 YVALQLRAQTYFEQKKYKEAILDIVEVISIEP 231
Cdd:COG5010 122 PNAYSNLAALLLSLGQDDEAKAALQRALGTSP 153
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
313-404 |
1.42e-08 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 52.09 E-value: 1.42e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 313 FENAGLYDKAIEDYNYLIENDPTDAVVFSQRANAYRHAGEYQKSIQdLNVSMELDPEDYWNYYMRGWIYVEmLKENDKAL 392
Cdd:COG3063 2 YLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAIA-LEKALKLDPNNAEALLNLAELLLE-LGDYDEAL 79
|
90
....*....|..
gi 2119751449 393 EDFNTAVTLNPE 404
Cdd:COG3063 80 AYLERALELDPS 91
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
346-431 |
3.96e-07 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 48.24 E-value: 3.96e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 346 AYRHAGEYQKSIQDLNVSMELDPEDYWNYYMRGWIYVEmLKENDKALEdFNTAVTLNPEDAYTRLMRGRLLLEkRNEKEK 425
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLE-QGRYDEAIA-LEKALKLDPNNAEALLNLAELLLE-LGDYDE 77
|
....*.
gi 2119751449 426 AIEDFN 431
Cdd:COG3063 78 ALAYLE 83
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
284-430 |
8.24e-07 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 48.80 E-value: 8.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 284 LAIKEFDQLIKYVGNENNIDYLIYERATTFENAGLYDKAIEDYNYLIENDPTDAVVFSQRANAYRHAGEYQKSIQDLNVS 363
Cdd:COG5010 1 ARALEGFDRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQA 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2119751449 364 MELDPEDYWNYYMRGWIYvEMLKENDKALEDFNTAVTLNPEDAYTRLMRGRLLLeKRNEKEKAIEDF 430
Cdd:COG5010 81 LQLDPNNPELYYNLALLY-SRSGDKDEAKEYYEKALALSPDNPNAYSNLAALLL-SLGQDDEAKAAL 145
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
309-403 |
4.72e-06 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 46.88 E-value: 4.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 309 RATTFENAGLYDKAIEDYNYLIENDPTDAVVFSQRANAYRHAGEYQKSIQDLNVSMELDPEDYWNYYMRGWIYvEMLKEN 388
Cdd:COG5010 60 SDNLYNKLGDFEESLALLEQALQLDPNNPELYYNLALLYSRSGDKDEAKEYYEKALALSPDNPNAYSNLAALL-LSLGQD 138
|
90
....*....|....*
gi 2119751449 389 DKALEDFNTAVTLNP 403
Cdd:COG5010 139 DEAKAALQRALGTSP 153
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
275-371 |
7.40e-06 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 44.39 E-value: 7.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 275 LYAKHGKFKLAIKEFDQLIKYvgNENNIDYLiYERATTFENAGLYDKAIEdYNYLIENDPTDAVVFSQRANAYRHAGEYQ 354
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALEL--DPDNADAL-NNLGLLLLEQGRYDEAIA-LEKALKLDPNNAEALLNLAELLLELGDYD 76
|
90
....*....|....*..
gi 2119751449 355 KSIQDLNVSMELDPEDY 371
Cdd:COG3063 77 EALAYLERALELDPSAL 93
|
|
| PLN03088 |
PLN03088 |
SGT1, suppressor of G2 allele of SKP1; Provisional |
319-412 |
1.08e-05 |
|
SGT1, suppressor of G2 allele of SKP1; Provisional
Pssm-ID: 215568 [Multi-domain] Cd Length: 356 Bit Score: 47.86 E-value: 1.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 319 YDKAIEDYNYLIENDPTDAVVFSQRANAYRHAGEYQKSIQDLNVSMELDPEDYWNYYMRGwIYVEMLKENDKALEDFNTA 398
Cdd:PLN03088 18 FALAVDLYTQAIDLDPNNAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKG-TACMKLEEYQTAKAALEKG 96
|
90
....*....|....*
gi 2119751449 399 VTLNPEDA-YTRLMR 412
Cdd:PLN03088 97 ASLAPGDSrFTKLIK 111
|
|
| MamA |
NF040959 |
magnetosome protein MamA; Magnetosomes are special lipid-bound organelles that comprise ... |
196-367 |
1.79e-05 |
|
magnetosome protein MamA; Magnetosomes are special lipid-bound organelles that comprise magnetic mineral crystals in magnetotactic bacteria (MTB). Magnetosomes are important for MTB to search for preferred microaerophilic environment. Proteins of this family typically contain five tetra-trico-peptide repeat (TPR) motifs. Based on structural analyses, MamA forms a large homooligomer through self-recognition to regulate protein-protein interaction in magnetosomes.
Pssm-ID: 468889 [Multi-domain] Cd Length: 204 Bit Score: 45.83 E-value: 1.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 196 NDLYYVALQLRAQTYFEQKK-------YKEAILDIVEVISIEPDDSDSRdQFLTYSL---NDYELALTELNEKSKNAPFN 265
Cdd:NF040959 26 NRLFSLSDRDRAKMYRNKGIshakkgrYDKAVRYLEQVARIDPDDVEAL-YRLGVAYlktGQYDRAIKVLEKVLSLAPDH 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 266 EFWNTTRARLYAKHGKFKLAIKEFDQLIKYVGNENNIDYLIyerATTFENAGLYDKAIEDYNYLIENDPTDAVVFSQRAN 345
Cdd:NF040959 105 VKAAYRKGVALLKIKDYEKAVEDLEEALEEKPDNFNLNYRL---GLALDGLGQYDKAIEAFQKALELDPNEIKYHQAIGF 181
|
170 180
....*....|....*....|..
gi 2119751449 346 AYRHAGEYQKSIQDLNVSMELD 367
Cdd:NF040959 182 MYVQKGDHETAAEHFKKAMELE 203
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
29-162 |
1.01e-04 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 44.33 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 29 YKIAYEAYSGGDNETALEYFEKDVVENPNSAYSHFYLSVLYVIQEKLEVAENHIDKALLYFPESSStmrskAYVVKGDIA 108
Cdd:COG2956 148 CELAELYLEQGDYDEAIEALEKALKLDPDCARALLLLAELYLEQGDYEEAIAALERALEQDPDYLP-----ALPRLAELY 222
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 2119751449 109 YKLKNIDNTFKYYALAIQLRPkEIDLYLDRGQYYFELGQLDKAEADFKHILTID 162
Cdd:COG2956 223 EKLGDPEEALELLRKALELDP-SDDLLLALADLLERKEGLEAALALLERQLRRH 275
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
29-162 |
1.53e-04 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 42.25 E-value: 1.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 29 YKIAYEAYSGGDNETALEYFEKDVVENPNSAYSHFYLSVLYVIQEKLEVAENHIDKALLYFPESSStmrskAYVVKGDIA 108
Cdd:COG5010 24 VEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPNNPE-----LYYNLALLY 98
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 2119751449 109 YKLKNIDNTFKYYALAIQLRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTID 162
Cdd:COG5010 99 SRSGDKDEAKEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRALGTS 152
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
120-263 |
1.61e-04 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 42.25 E-value: 1.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 120 YYALAIQLRPKEIDLYLDRGQYYFELGQLDKAEADFKHILTIDASNIYAYGGLGRNYLKEKRYDLAEKKLTKAIQLNDLY 199
Cdd:COG5010 8 DRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPNN 87
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2119751449 200 YVALQLRAQTYFEQKKYKEAILDIVEVISIEPDDSDSRDQ--FLTYSLNDYELALTELNEKSKNAP 263
Cdd:COG5010 88 PELYYNLALLYSRSGDKDEAKEYYEKALALSPDNPNAYSNlaALLLSLGQDDEAKAALQRALGTSP 153
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
357-498 |
2.10e-04 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 41.53 E-value: 2.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 357 IQDLNVSMELDPEDYWNYYMRGWIYVEMlKENDKALEDFNTAVTLNPEDAYTRLMRGRlllekrnekekaiedfnviatl 436
Cdd:COG4235 3 IARLRQALAANPNDAEGWLLLGRAYLRL-GRYDEALAAYEKALRLDPDNADALLDLAE---------------------- 59
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2119751449 437 ekeikedgnckqyALFHLDKKSEALQLMKDILEKYPSEGN-YYEAACLYALMNKKEEALNALK 498
Cdd:COG4235 60 -------------ALLAAGDTEEAEELLERALALDPDNPEaLYLLGLAAFQQGDYAEAIAAWQ 109
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
174-275 |
2.92e-04 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 40.36 E-value: 2.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 174 RNYLKEKRYDLAEKKLTKAIQLN---DLYYVALQLRAQTYFEQKKYKEAILDIVEVISIEPDDSDSRDQFLT-----YSL 245
Cdd:COG1729 1 KALLKAGDYDEAIAAFKAFLKRYpnsPLAPDALYWLGEAYYALGDYDEAAEAFEKLLKRYPDSPKAPDALLKlglsyLEL 80
|
90 100 110
....*....|....*....|....*....|
gi 2119751449 246 NDYELALTELNEKSKNAPFNEFWNTTRARL 275
Cdd:COG1729 81 GDYDKARATLEELIKKYPDSEAAKEARARL 110
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
39-130 |
4.21e-04 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 39.77 E-value: 4.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 39 GDNETALEYFEKDVVENPNSAYSHFYLSVLYVIQEKLEVAENhIDKALLYFPEssstmRSKAYVVKGDIAYKLKNIDNTF 118
Cdd:COG3063 6 GDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAIA-LEKALKLDPN-----NAEALLNLAELLLELGDYDEAL 79
|
90
....*....|..
gi 2119751449 119 KYYALAIQLRPK 130
Cdd:COG3063 80 AYLERALELDPS 91
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
33-130 |
8.08e-04 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 39.20 E-value: 8.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 33 YEAYSGGDNETALEYFEKDVVENPNSAY---SHFYLSVLYVIQEKLEVAENHIDKALLYFPESSstMRSKAYVVKGDIAY 109
Cdd:COG1729 1 KALLKAGDYDEAIAAFKAFLKRYPNSPLapdALYWLGEAYYALGDYDEAAEAFEKLLKRYPDSP--KAPDALLKLGLSYL 78
|
90 100
....*....|....*....|.
gi 2119751449 110 KLKNIDNTFKYYALAIQLRPK 130
Cdd:COG1729 79 ELGDYDKARATLEELIKKYPD 99
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
142-234 |
9.08e-04 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 39.20 E-value: 9.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 142 YFELGQLDKAEADFKHILTIDASNIY---AYGGLGRNYLKEKRYDLAEKKLTKAIQL---NDLYYVALQLRAQTYFEQKK 215
Cdd:COG1729 3 LLKAGDYDEAIAAFKAFLKRYPNSPLapdALYWLGEAYYALGDYDEAAEAFEKLLKRypdSPKAPDALLKLGLSYLELGD 82
|
90
....*....|....*....
gi 2119751449 216 YKEAILDIVEVISIEPDDS 234
Cdd:COG1729 83 YDKARATLEELIKKYPDSE 101
|
|
| 3a0801s09 |
TIGR00990 |
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ... |
308-427 |
1.16e-03 |
|
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273380 [Multi-domain] Cd Length: 615 Bit Score: 41.51 E-value: 1.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 308 ERATTFENAGLYDKAIEDYNYLIENDPtDAVVFSQRANAYRHAGEYQKSIQDLNVSMELDPeDYWNYYMRGWIYVEMLKE 387
Cdd:TIGR00990 132 EKGNKAYRNKDFNKAIKLYSKAIECKP-DPVYYSNRAACHNALGDWEKVVEDTTAALELDP-DYSKALNRRANAYDGLGK 209
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 2119751449 388 NDKALEDFnTAVTLNPE--DAYTRLMRGRLLLEKRNEKEKAI 427
Cdd:TIGR00990 210 YADALLDL-TASCIIDGfrNEQSAQAVERLLKKFAESKAKEI 250
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
342-472 |
1.68e-03 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 39.17 E-value: 1.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 342 QRANAYRHAGEYQKSIQDLNVSMELDPEDYWNYYMRGWIYV-EMLKENDKALEDFNTAVTLNPEDAYTRLMRGRLLLeKR 420
Cdd:COG5010 23 LVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLyNKLGDFEESLALLEQALQLDPNNPELYYNLALLYS-RS 101
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 2119751449 421 NEKEKAIEDFNVIATLEKEIKEDGNCKQYALFHLDKKSEALQLMKDILEKYP 472
Cdd:COG5010 102 GDKDEAKEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRALGTSP 153
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
274-415 |
2.09e-03 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 38.05 E-value: 2.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 274 RLYAKHGKFKLAIKEFDQLIKYVGNENNIDYLIYERATTFENAGLYDKAIEDYNYLIENDPTDavvfSQRANAyrhagey 353
Cdd:COG1729 1 KALLKAGDYDEAIAAFKAFLKRYPNSPLAPDALYWLGEAYYALGDYDEAAEAFEKLLKRYPDS----PKAPDA------- 69
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2119751449 354 qksiqdlnvsmeldpedywnYYMRGWIYVEmLKENDKALEDFNTAVTLNPEDAYTRLMRGRL 415
Cdd:COG1729 70 --------------------LLKLGLSYLE-LGDYDKARATLEELIKKYPDSEAAKEARARL 110
|
|
| COG4700 |
COG4700 |
Uncharacterized conserved protein ECs_4300, contains TPR-like domain [Function unknown]; |
172-294 |
2.14e-03 |
|
Uncharacterized conserved protein ECs_4300, contains TPR-like domain [Function unknown];
Pssm-ID: 443735 [Multi-domain] Cd Length: 249 Bit Score: 39.87 E-value: 2.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 172 LGRNYLKEKRYDLA----EKKLTKAIQlNDlYYVALQLrAQTYFEQKKYKEAILDIVEVISIEPDDSDSRDQFLT----Y 243
Cdd:COG4700 95 LADALLELGRYDEAielyEEALTGIFA-DD-PHILLGL-AQALFELGRYAEALETLEKLIAKNPDFKSSDAHLLYaralE 171
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 2119751449 244 SLNDYELALTELNEKSKNAPFNEfwntTRARL---YAKHGKFKLAIKEFDQLIK 294
Cdd:COG4700 172 ALGDLEAAEAELEALARRYSGPE----ARYRYakfLARQGRTAEAKELLEEILD 221
|
|
| COG4700 |
COG4700 |
Uncharacterized conserved protein ECs_4300, contains TPR-like domain [Function unknown]; |
307-441 |
3.53e-03 |
|
Uncharacterized conserved protein ECs_4300, contains TPR-like domain [Function unknown];
Pssm-ID: 443735 [Multi-domain] Cd Length: 249 Bit Score: 39.48 E-value: 3.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 307 YERATTFEN----------AGLYDKAIEDYNYLIE-NDPTDAVVFSQRANAYRHAGEYQKSIQDLNVSMELDPE----DY 371
Cdd:COG4700 83 LEFADTVQNrvrladalleLGRYDEAIELYEEALTgIFADDPHILLGLAQALFELGRYAEALETLEKLIAKNPDfkssDA 162
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 372 WNYYmrGWIYVEmLKENDKALEDFNTAVTLNPeDAYTRLMRGrLLLEKRNEKEKAIEdfnVIATLEKEIK 441
Cdd:COG4700 163 HLLY--ARALEA-LGDLEAAEAELEALARRYS-GPEARYRYA-KFLARQGRTAEAKE---LLEEILDEAK 224
|
|
| OM_YfiO |
TIGR03302 |
outer membrane assembly lipoprotein YfiO; Members of this protein family include YfiO, a ... |
306-430 |
3.54e-03 |
|
outer membrane assembly lipoprotein YfiO; Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 274513 [Multi-domain] Cd Length: 235 Bit Score: 39.07 E-value: 3.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 306 IYERATTFENAGLYDKAIEDYNYLIENDPTDAvvFSQRAN-----AYRHAGEYQKSIQDLNVSMELDPE----DYwNYYM 376
Cdd:TIGR03302 36 LYEEAKEALDSGDYTEAIKYFEALESRYPFSP--YAEQAQldlayAYYKSGDYAEAIAAADRFIRLHPNhpdaDY-AYYL 112
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2119751449 377 RGWIYVEMLKEND-------KALEDFNTAVTLNPEDAYTRLMRGRLLLEKRN--EKEKAIEDF 430
Cdd:TIGR03302 113 RGLSNYNQIDRVDrdqtaarEAFEAFQELIRRYPNSEYAPDAKKRMDYLRNRlaGKELYVARF 175
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
243-348 |
3.69e-03 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 37.28 E-value: 3.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 243 YSLNDYELALTELNE------KSKNAPFNEFWnttRARLYAKHGKFKLAIKEFDQLIKYVGNENNIDYLIYERATTFENA 316
Cdd:COG1729 4 LKAGDYDEAIAAFKAflkrypNSPLAPDALYW---LGEAYYALGDYDEAAEAFEKLLKRYPDSPKAPDALLKLGLSYLEL 80
|
90 100 110
....*....|....*....|....*....|..
gi 2119751449 317 GLYDKAIEDYNYLIENDPTDAVVFSQRANAYR 348
Cdd:COG1729 81 GDYDKARATLEELIKKYPDSEAAKEARARLAR 112
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
385-473 |
4.05e-03 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 36.69 E-value: 4.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 385 LKENDKALEDFNTAVTLNPEDAYTRLMRGRLLLEkRNEKEKAIEdFNVIATLEKEIKEDGNCKQYALFHLDKKSEALQLM 464
Cdd:COG3063 5 LGDLEEAEEYYEKALELDPDNADALNNLGLLLLE-QGRYDEAIA-LEKALKLDPNNAEALLNLAELLLELGDYDEALAYL 82
|
....*....
gi 2119751449 465 KDILEKYPS 473
Cdd:COG3063 83 ERALELDPS 91
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
134-195 |
8.99e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 35.44 E-value: 8.99e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2119751449 134 LYLDRGQYYFELGQLDKAEADFKHILTI--------DASNIYAYGGLGRNYLKEKRYDLAEKKLTKAIQL 195
Cdd:pfam13424 5 ALNNLAAVLRRLGRYDEALELLEKALEIarrllgpdHPLTATTLLNLGRLYLELGRYEEALELLERALAL 74
|
|
| TPR_16 |
pfam13432 |
Tetratricopeptide repeat; This family is found predominantly at the C-terminus of ... |
271-337 |
9.71e-03 |
|
Tetratricopeptide repeat; This family is found predominantly at the C-terminus of transglutaminase enzyme core regions.
Pssm-ID: 433202 [Multi-domain] Cd Length: 68 Bit Score: 35.00 E-value: 9.71e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2119751449 271 TRARLYAKHGKFKLAIKEFDQLIKYVGNENNIDYLIYERATTFENAGLYDKAIEDYNYLIENDPTDA 337
Cdd:pfam13432 2 ALARAALRAGDYDDAAAALEAALARFPESPDAAAALLLLGLAALRQGRLAEAAAAYRAALRAAPGDP 68
|
|
| |
