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Conserved domains on  [gi|1806352619|dbj|BBY42412|]
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hypothetical protein MCEL_07070 [Mycolicibacterium celeriflavum]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NlpC super family cl43273
Cell wall-associated hydrolase, NlpC_P60 family [Cell wall/membrane/envelope biogenesis];
16-38 1.52e-06

Cell wall-associated hydrolase, NlpC_P60 family [Cell wall/membrane/envelope biogenesis];


The actual alignment was detected with superfamily member COG0791:

Pssm-ID: 440554 [Multi-domain]  Cd Length: 218  Bit Score: 47.00  E-value: 1.52e-06
                          10        20
                  ....*....|....*....|...
gi 1806352619  16 GTPYVSGGDSPAGTDCSGLVSWV 38
Cdd:COG0791   112 GTPYVWGGTSPSGFDCSGLVQYV 134
 
Name Accession Description Interval E-value
NlpC COG0791
Cell wall-associated hydrolase, NlpC_P60 family [Cell wall/membrane/envelope biogenesis];
16-38 1.52e-06

Cell wall-associated hydrolase, NlpC_P60 family [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440554 [Multi-domain]  Cd Length: 218  Bit Score: 47.00  E-value: 1.52e-06
                          10        20
                  ....*....|....*....|...
gi 1806352619  16 GTPYVSGGDSPAGTDCSGLVSWV 38
Cdd:COG0791   112 GTPYVWGGTSPSGFDCSGLVQYV 134
NLPC_P60 pfam00877
NlpC/P60 family; The function of this domain is unknown. It is found in several lipoproteins.
 16-38 2.75e-05

NlpC/P60 family; The function of this domain is unknown. It is found in several lipoproteins.


Pssm-ID: 395705 [Multi-domain]  Cd Length: 105  Bit Score: 41.50  E-value: 2.75e-05
                          10        20
                  ....*....|....*....|...
gi 1806352619  16 GTPYVSGGDSPAGTDCSGLVSWV 38
Cdd:pfam00877   1 GVPYRWGGGSPSGFDCSGLVRYA 23
 
Name Accession Description Interval E-value
NlpC COG0791
Cell wall-associated hydrolase, NlpC_P60 family [Cell wall/membrane/envelope biogenesis];
16-38 1.52e-06

Cell wall-associated hydrolase, NlpC_P60 family [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440554 [Multi-domain]  Cd Length: 218  Bit Score: 47.00  E-value: 1.52e-06
                          10        20
                  ....*....|....*....|...
gi 1806352619  16 GTPYVSGGDSPAGTDCSGLVSWV 38
Cdd:COG0791   112 GTPYVWGGTSPSGFDCSGLVQYV 134
NLPC_P60 pfam00877
NlpC/P60 family; The function of this domain is unknown. It is found in several lipoproteins.
 16-38 2.75e-05

NlpC/P60 family; The function of this domain is unknown. It is found in several lipoproteins.


Pssm-ID: 395705 [Multi-domain]  Cd Length: 105  Bit Score: 41.50  E-value: 2.75e-05
                          10        20
                  ....*....|....*....|...
gi 1806352619  16 GTPYVSGGDSPAGTDCSGLVSWV 38
Cdd:pfam00877   1 GVPYRWGGGSPSGFDCSGLVRYA 23
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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