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Conserved domains on  [gi|953949648|dbj|BAT58121|]
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glutathione S-transferase GstB [Variibacter gotjawalensis]

Protein Classification

glutathione S-transferase family protein( domain architecture ID 11427749)

glutathione S-transferase (GST) family protein may catalyze the conjugation of reduced glutathione to a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

EC:  2.5.1.-
Gene Ontology:  GO:0006749|GO:0005515
PubMed:  11035031
SCOP:  4000976|4000472

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
GstA COG0625
Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];
1-201 2.02e-54

Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];


:

Pssm-ID: 440390 [Multi-domain]  Cd Length: 205  Bit Score: 172.39  E-value: 2.02e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648   1 MLKIWGRNTSSNVQMAMWAVGELGLPHQ--RIDIGGPFGTTPEYQKMNPNLVVPTLEeDDGFILWESKSIIRYLAEKHNG 78
Cdd:COG0625    1 MMKLYGSPPSPNSRRVRIALEEKGLPYElvPVDLAKGEQKSPEFLALNPLGKVPVLV-DDGLVLTESLAILEYLAERYPE 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  79 A-ILPKDVRQRARASQWMDWQLSVQGPAITPVFWGLVrtppEKRDPVAIDAAKKKITAAMNILNDALGKTEFVAGSDFSY 157
Cdd:COG0625   80 PpLLPADPAARARVRQWLAWADGDLHPALRNLLERLA----PEKDPAAIARARAELARLLAVLEARLAGGPYLAGDRFSI 155
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 953949648 158 GDIPVGVQAYRYYRLLDDRPAQPNLDRWYAAISSRPAFKEQVAA 201
Cdd:COG0625  156 ADIALAPVLRRLDRLGLDLADYPNLAAWLARLAARPAFQRALAA 199
 
Name Accession Description Interval E-value
GstA COG0625
Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];
1-201 2.02e-54

Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440390 [Multi-domain]  Cd Length: 205  Bit Score: 172.39  E-value: 2.02e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648   1 MLKIWGRNTSSNVQMAMWAVGELGLPHQ--RIDIGGPFGTTPEYQKMNPNLVVPTLEeDDGFILWESKSIIRYLAEKHNG 78
Cdd:COG0625    1 MMKLYGSPPSPNSRRVRIALEEKGLPYElvPVDLAKGEQKSPEFLALNPLGKVPVLV-DDGLVLTESLAILEYLAERYPE 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  79 A-ILPKDVRQRARASQWMDWQLSVQGPAITPVFWGLVrtppEKRDPVAIDAAKKKITAAMNILNDALGKTEFVAGSDFSY 157
Cdd:COG0625   80 PpLLPADPAARARVRQWLAWADGDLHPALRNLLERLA----PEKDPAAIARARAELARLLAVLEARLAGGPYLAGDRFSI 155
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 953949648 158 GDIPVGVQAYRYYRLLDDRPAQPNLDRWYAAISSRPAFKEQVAA 201
Cdd:COG0625  156 ADIALAPVLRRLDRLGLDLADYPNLAAWLARLAARPAFQRALAA 199
GST_C_2 cd03180
C-terminal, alpha helical domain of an unknown subfamily 2 of Glutathione S-transferases; ...
86-195 2.53e-45

C-terminal, alpha helical domain of an unknown subfamily 2 of Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.


Pssm-ID: 198289 [Multi-domain]  Cd Length: 110  Bit Score: 145.89  E-value: 2.53e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  86 RQRARASQWMDWQLSVQGPAITPVFWGLVRTPPEKRDPVAIDAAKKKITAAMNILNDALGKTEFVAGSDFSYGDIPVGVQ 165
Cdd:cd03180    1 AQRALADRWMDWQTSTLNPAFRYAFWGLVRTPPEQRDPAAIAASLAACNKLMAILDAQLARQAYLAGDRFTLADIALGCS 80
                         90       100       110
                 ....*....|....*....|....*....|
gi 953949648 166 AYRYYRLLDDRPAQPNLDRWYAAISSRPAF 195
Cdd:cd03180   81 VYRWLELPIERPALPHLERWYARLSQRPAF 110
PLN02395 PLN02395
glutathione S-transferase
40-204 3.93e-17

glutathione S-transferase


Pssm-ID: 166036 [Multi-domain]  Cd Length: 215  Bit Score: 76.06  E-value: 3.93e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  40 PEYQKMNPNLVVPTLEEDDgFILWESKSIIRYLAEKHNGA---ILPKDVRQRARASQWMDWQLSVQGPAITP-----VFW 111
Cdd:PLN02395  42 PEYLALQPFGVVPVIVDGD-YKIFESRAIMRYYAEKYRSQgpdLLGKTIEERGQVEQWLDVEATSYHPPLLNltlhiLFA 120
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648 112 GLVRTPPEKRdpvAIDAAKKKITAAMNILNDALGKTEFVAGSDFSYGDI-----------PVGvQAYryyrLLDDRpaqP 180
Cdd:PLN02395 121 SKMGFPADEK---VIKESEEKLAKVLDVYEARLSKSKYLAGDFVSLADLahlpfteylvgPIG-KAY----LIKDR---K 189
                        170       180
                 ....*....|....*....|....
gi 953949648 181 NLDRWYAAISSRPAFKEQVAAVPF 204
Cdd:PLN02395 190 HVSAWWDDISSRPAWKEVLAKYSL 213
GST_N_2 pfam13409
Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.
9-75 5.85e-12

Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.


Pssm-ID: 433184 [Multi-domain]  Cd Length: 68  Bit Score: 58.80  E-value: 5.85e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 953949648    9 TSSNVQMAMWAVGELGLPHQRIDI-GGPFGTTPEYQKMNPNLVVPTLEEDDGFILWESKSIIRYLAEK 75
Cdd:pfam13409   1 FSPFSHRVRLALEEKGLPYEIELVdLDPKDKPPELLALNPLGTVPVLVLPDGTVLTDSLVILEYLEEL 68
maiA TIGR01262
maleylacetoacetate isomerase; Maleylacetoacetate isomerase is an enzyme of tyrosine and ...
39-91 1.05e-07

maleylacetoacetate isomerase; Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism. [Energy metabolism, Amino acids and amines]


Pssm-ID: 273527 [Multi-domain]  Cd Length: 210  Bit Score: 50.40  E-value: 1.05e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 953949648   39 TPEYQKMNPNLVVPTLeEDDGFILWESKSIIRYLAEKHNG-AILPKDVRQRARA 91
Cdd:TIGR01262  40 SPEFLALNPQGLVPTL-DIDGEVLTQSLAIIEYLEETYPDpPLLPADPIKRARV 92
 
Name Accession Description Interval E-value
GstA COG0625
Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];
1-201 2.02e-54

Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440390 [Multi-domain]  Cd Length: 205  Bit Score: 172.39  E-value: 2.02e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648   1 MLKIWGRNTSSNVQMAMWAVGELGLPHQ--RIDIGGPFGTTPEYQKMNPNLVVPTLEeDDGFILWESKSIIRYLAEKHNG 78
Cdd:COG0625    1 MMKLYGSPPSPNSRRVRIALEEKGLPYElvPVDLAKGEQKSPEFLALNPLGKVPVLV-DDGLVLTESLAILEYLAERYPE 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  79 A-ILPKDVRQRARASQWMDWQLSVQGPAITPVFWGLVrtppEKRDPVAIDAAKKKITAAMNILNDALGKTEFVAGSDFSY 157
Cdd:COG0625   80 PpLLPADPAARARVRQWLAWADGDLHPALRNLLERLA----PEKDPAAIARARAELARLLAVLEARLAGGPYLAGDRFSI 155
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 953949648 158 GDIPVGVQAYRYYRLLDDRPAQPNLDRWYAAISSRPAFKEQVAA 201
Cdd:COG0625  156 ADIALAPVLRRLDRLGLDLADYPNLAAWLARLAARPAFQRALAA 199
GST_C_2 cd03180
C-terminal, alpha helical domain of an unknown subfamily 2 of Glutathione S-transferases; ...
86-195 2.53e-45

C-terminal, alpha helical domain of an unknown subfamily 2 of Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.


Pssm-ID: 198289 [Multi-domain]  Cd Length: 110  Bit Score: 145.89  E-value: 2.53e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  86 RQRARASQWMDWQLSVQGPAITPVFWGLVRTPPEKRDPVAIDAAKKKITAAMNILNDALGKTEFVAGSDFSYGDIPVGVQ 165
Cdd:cd03180    1 AQRALADRWMDWQTSTLNPAFRYAFWGLVRTPPEQRDPAAIAASLAACNKLMAILDAQLARQAYLAGDRFTLADIALGCS 80
                         90       100       110
                 ....*....|....*....|....*....|
gi 953949648 166 AYRYYRLLDDRPAQPNLDRWYAAISSRPAF 195
Cdd:cd03180   81 VYRWLELPIERPALPHLERWYARLSQRPAF 110
GST_N_2 cd03047
GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with ...
2-73 4.92e-34

GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.


Pssm-ID: 239345 [Multi-domain]  Cd Length: 73  Bit Score: 115.87  E-value: 4.92e-34
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 953949648   2 LKIWGRNTSSNVQMAMWAVGELGLPHQRIDIGGPFG--TTPEYQKMNPNLVVPTLeEDDGFILWESKSIIRYLA 73
Cdd:cd03047    1 LTIWGRRSSINVQKVLWLLDELGLPYERIDAGGQFGglDTPEFLAMNPNGRVPVL-EDGDFVLWESNAILRYLA 73
PLN02395 PLN02395
glutathione S-transferase
40-204 3.93e-17

glutathione S-transferase


Pssm-ID: 166036 [Multi-domain]  Cd Length: 215  Bit Score: 76.06  E-value: 3.93e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  40 PEYQKMNPNLVVPTLEEDDgFILWESKSIIRYLAEKHNGA---ILPKDVRQRARASQWMDWQLSVQGPAITP-----VFW 111
Cdd:PLN02395  42 PEYLALQPFGVVPVIVDGD-YKIFESRAIMRYYAEKYRSQgpdLLGKTIEERGQVEQWLDVEATSYHPPLLNltlhiLFA 120
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648 112 GLVRTPPEKRdpvAIDAAKKKITAAMNILNDALGKTEFVAGSDFSYGDI-----------PVGvQAYryyrLLDDRpaqP 180
Cdd:PLN02395 121 SKMGFPADEK---VIKESEEKLAKVLDVYEARLSKSKYLAGDFVSLADLahlpfteylvgPIG-KAY----LIKDR---K 189
                        170       180
                 ....*....|....*....|....
gi 953949648 181 NLDRWYAAISSRPAFKEQVAAVPF 204
Cdd:PLN02395 190 HVSAWWDDISSRPAWKEVLAKYSL 213
PLN02473 PLN02473
glutathione S-transferase
1-197 2.61e-16

glutathione S-transferase


Pssm-ID: 166114 [Multi-domain]  Cd Length: 214  Bit Score: 73.87  E-value: 2.61e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648   1 MLKIWGRNTSSNVQMAMWAVGELGLPHQ--RIDIGGPFGTTPEYQKMNPNLVVPTLEEDDgFILWESKSIIRYLAEKHNG 78
Cdd:PLN02473   2 VVKVYGQIKAANPQRVLLCFLEKGIEFEviHVDLDKLEQKKPEHLLRQPFGQVPAIEDGD-LKLFESRAIARYYATKYAD 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  79 A---ILPKDVRQRARASQWMDWQLSVQGPAITPVFWGLVRTPP--EKRDPVAIDAAKKKITAAMNILNDALGKTEFVAGS 153
Cdd:PLN02473  81 QgtdLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRlgEPCDVALVEELKVKFDKVLDVYENRLATNRYLGGD 160
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 953949648 154 DFSYGDIpVGVQAYRYYRLLDD----RPAQPNLDRWYAAISSRPAFKE 197
Cdd:PLN02473 161 EFTLADL-THMPGMRYIMNETSlsglVTSRENLNRWWNEISARPAWKK 207
GST_N_family cd00570
Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic ...
2-73 2.12e-15

Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Based on sequence similarity, different classes of GSTs have been identified, which display varying tissue distribution, substrate specificities and additional specific activities. In humans, GSTs display polymorphisms which may influence individual susceptibility to diseases such as cancer, arthritis, allergy and sclerosis. Some GST family members with non-GST functions include glutaredoxin 2, the CLIC subfamily of anion channels, prion protein Ure2p, crystallins, metaxin 2 and stringent starvation protein A.


Pssm-ID: 238319 [Multi-domain]  Cd Length: 71  Bit Score: 67.98  E-value: 2.12e-15
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 953949648   2 LKIWGRNTSSNVQMAMWAVGELGLPHQRIDIGGPFGTTPEYQKMNPNLVVPTLEEdDGFILWESKSIIRYLA 73
Cdd:cd00570    1 LKLYYFPGSPRSLRVRLALEEKGLPYELVPVDLGEGEQEEFLALNPLGKVPVLED-GGLVLTESLAILEYLA 71
PRK13972 PRK13972
GSH-dependent disulfide bond oxidoreductase; Provisional
22-194 6.35e-13

GSH-dependent disulfide bond oxidoreductase; Provisional


Pssm-ID: 172475 [Multi-domain]  Cd Length: 215  Bit Score: 64.71  E-value: 6.35e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  22 ELGLPHQ--RIDIGGPFGTTPEYQKMNPNLVVPTLEED---DG---FILWESKSIIRYLAEKhNGAILPKDVRQRARASQ 93
Cdd:PRK13972  21 EAELDYRliKVDLGKGGQFRPEFLRISPNNKIPAIVDHspaDGgepLSLFESGAILLYLAEK-TGLFLSHETRERAATLQ 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  94 WMDWQLSVQGPAITPVFWGLVRTPpeKRDPVAIDAAKKKITAAMNILNDALGKTEFVAGSDFSYGDIPVGVQAYRYYRLL 173
Cdd:PRK13972 100 WLFWQVGGLGPMLGQNHHFNHAAP--QTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQR 177
                        170       180
                 ....*....|....*....|.
gi 953949648 174 DDRPAQPNLDRWYAAISSRPA 194
Cdd:PRK13972 178 IDLAMYPAVKNWHERIRSRPA 198
GST_C_6 cd03205
C-terminal, alpha helical domain of an unknown subfamily 6 of Glutathione S-transferases; ...
117-197 1.30e-12

C-terminal, alpha helical domain of an unknown subfamily 6 of Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs, including Pseudomonas fluorescens GST with a known three-dimensional structure. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Though the three-dimensional structure of Pseudomonas fluorescens GST has been determined, there is no information on its functional characterization.


Pssm-ID: 198314 [Multi-domain]  Cd Length: 109  Bit Score: 61.45  E-value: 1.30e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648 117 PPEKRDPVAIDAAKKKITAAMNILNDALGKTEfvaGSDFSYGDIPVGVqAYRYYRL----LDDRPAQPNLDRWYAAISSR 192
Cdd:cd03205   26 PEEKQHQPWIERQWGKIERALDALEAELGDLP---GGRLTLGDIAVAC-ALGYLDFrfpeLDWRAGHPALAAWFARFEAR 101

                 ....*
gi 953949648 193 PAFKE 197
Cdd:cd03205  102 PSFQA 106
GST_N_2 pfam13409
Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.
9-75 5.85e-12

Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.


Pssm-ID: 433184 [Multi-domain]  Cd Length: 68  Bit Score: 58.80  E-value: 5.85e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 953949648    9 TSSNVQMAMWAVGELGLPHQRIDI-GGPFGTTPEYQKMNPNLVVPTLEEDDGFILWESKSIIRYLAEK 75
Cdd:pfam13409   1 FSPFSHRVRLALEEKGLPYEIELVdLDPKDKPPELLALNPLGTVPVLVLPDGTVLTDSLVILEYLEEL 68
GST_C_Phi cd03187
C-terminal, alpha helical domain of Class Phi Glutathione S-transferases; Glutathione ...
87-196 3.01e-11

C-terminal, alpha helical domain of Class Phi Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including transport of flavonoid pigments to the vacuole, shoot regeneration and GSH peroxidase activity.


Pssm-ID: 198296 [Multi-domain]  Cd Length: 118  Bit Score: 58.01  E-value: 3.01e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  87 QRARASQWMDWQLSVQGPAITPVFWGLVRTPP--EKRDPVAIDAAKKKITAAMNILNDALGKTEFVAGSDFSYGD---IP 161
Cdd:cd03187    2 ERALVEQWLEVEAHQFDPPASKLVFELVFKPMlgLKTDEAVVEENEAKLKKVLDVYEARLSKSKYLAGDSFTLADlshLP 81
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 953949648 162 VG--VQAYRYYRLLDDRPaqpNLDRWYAAISSRPAFK 196
Cdd:cd03187   82 NLhyLMATPSKKLFDSRP---HVKAWWEDISARPAWK 115
PRK11752 PRK11752
putative S-transferase; Provisional
29-196 3.15e-11

putative S-transferase; Provisional


Pssm-ID: 183298 [Multi-domain]  Cd Length: 264  Bit Score: 60.71  E-value: 3.15e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  29 RIDIGGPFGTtpEYQKMNPNLVVPTLEEDDG---FILWESKSIIRYLAEKHnGAILPKDVRQRARASQWMDWQlsvQGPA 105
Cdd:PRK11752  81 RIGEGDQFSS--GFVEINPNSKIPALLDRSGnppIRVFESGAILLYLAEKF-GAFLPKDLAARTETLNWLFWQ---QGSA 154
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648 106 itPVFWG----LVRTPPEKRDpVAIDAAKKKITAAMNILNDALGKTEFVAGSDFSYGDIPV----G--VQ--AYRYYRLL 173
Cdd:PRK11752 155 --PFLGGgfghFYAYAPEKIE-YAINRFTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIwpwyGnlVLgnLYDAAEFL 231
                        170       180
                 ....*....|....*....|...
gi 953949648 174 DDRpAQPNLDRWYAAISSRPAFK 196
Cdd:PRK11752 232 DVG-SYKHVQRWAKEIAERPAVK 253
GST_N_Ure2p_like cd03048
GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related ...
22-77 3.33e-11

GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and Schizosaccharomyces pombe GST-I. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes.


Pssm-ID: 239346 [Multi-domain]  Cd Length: 81  Bit Score: 57.17  E-value: 3.33e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  22 ELGLPHQRIDIGGPFGT--TPEYQKMNPNLVVPTLEEDD--GFILWESKSIIRYLAEKHN 77
Cdd:cd03048   21 ELGLPYEIHPVDISKGEqkKPEFLKINPNGRIPAIVDHNgtPLTVFESGAILLYLAEKYD 80
GST_C_8 cd03207
C-terminal, alpha helical domain of an unknown subfamily 8 of Glutathione S-transferases; ...
93-194 5.61e-11

C-terminal, alpha helical domain of an unknown subfamily 8 of Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 8; composed of Agrobacterium tumefaciens GST and other uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The three-dimensional structure of Agrobacterium tumefaciens GST has been determined but there is no information on its functional characterization.


Pssm-ID: 198316 [Multi-domain]  Cd Length: 101  Bit Score: 56.92  E-value: 5.61e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  93 QWMDWQLSVQGPAITPvfWGLVRTPPEKRDPVAIDAAKKKITAAMNILNDALGKTEFVAGSDFSYGDIPVGVqAYRYYRL 172
Cdd:cd03207    3 RWLFFAAGTVEPPLLN--KALGRFFEPPWGEPAIAAAYGDLDERLAALEAALAGRPYLVGERFSAADLLLAS-VLRWARA 79
                         90       100
                 ....*....|....*....|..
gi 953949648 173 LDDRPAQPNLDRWYAAISSRPA 194
Cdd:cd03207   80 FGLLPEYPALRAYVARCTARPA 101
GST_C_EF1Bgamma_like cd03181
Glutathione S-transferase C-terminal-like, alpha helical domain of the Gamma subunit of ...
87-205 8.57e-11

Glutathione S-transferase C-terminal-like, alpha helical domain of the Gamma subunit of Elongation Factor 1B and similar proteins; Glutathione S-transferase (GST) C-terminal domain family, Gamma subunit of Elongation Factor 1B (EF1Bgamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in protein biosynthesis, EF1Bgamma may also display other functions. The recombinant rice protein has been shown to possess GSH conjugating activity. The yeast EF1Bgamma binds to membranes in a calcium dependent manner and is also part of a complex that binds to the msrA (methionine sulfoxide reductase) promoter suggesting a function in the regulation of its gene expression. Also included in this subfamily is the GST_C-like domain at the N-terminus of human valyl-tRNA synthetase (ValRS) and its homologs. Metazoan ValRS forms a stable complex with Elongation Factor-1H (EF-1H), and together, they catalyze consecutive steps in protein biosynthesis, tRNA aminoacylation and its transfer to EF.


Pssm-ID: 198290 [Multi-domain]  Cd Length: 123  Bit Score: 57.19  E-value: 8.57e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  87 QRARASQWMDW-QLSVQGPAITPVFWGLVRTPpekRDPVAIDAAKKKITAAMNILNDALGKTEFVAGSDFSYGDIPVGVQ 165
Cdd:cd03181    1 EAAQVLQWISFaNSELLPAAATWVLPLLGIAP---YNKKAVDKAKEDLKRALGVLEEHLLTRTYLVGERITLADIFVASA 77
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 953949648 166 AYRYYRLLDD---RPAQPNLDRWYAAISSRPAFKEQVAAVPFV 205
Cdd:cd03181   78 LLRGFETVLDpefRKKYPNVTRWFNTVVNQPKFKAVFGEVKLC 120
GST_N_GTT1_like cd03046
GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly ...
2-76 9.33e-11

GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pombe GST-III is implicated in the detoxification of various metals.


Pssm-ID: 239344 [Multi-domain]  Cd Length: 76  Bit Score: 55.59  E-value: 9.33e-11
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 953949648   2 LKIWGrNTSSNVQMAMWAVGELGLP--HQRIDIGGPFGTTPEYQKMNPNLVVPTLEeDDGFILWESKSIIRYLAEKH 76
Cdd:cd03046    1 ITLYH-LPRSRSFRILWLLEELGLPyeLVLYDRGPGEQAPPEYLAINPLGKVPVLV-DGDLVLTESAAIILYLAEKY 75
GST_N_3 pfam13417
Glutathione S-transferase, N-terminal domain;
6-78 2.54e-10

Glutathione S-transferase, N-terminal domain;


Pssm-ID: 433190 [Multi-domain]  Cd Length: 75  Bit Score: 54.54  E-value: 2.54e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 953949648    6 GRNTSSNVQMAMWAVGELGLPHQRIDIGgPFGTTPEYQKMNPNLVVPTLEeDDGFILWESKSIIRYLAEKHNG 78
Cdd:pfam13417   3 GFPGSPYARRVRIALNEKGLPYEFVPIP-PGDHPPELLAKNPLGKVPVLE-DDGGILCESLAIIDYLEELYPG 73
GST_N_Beta cd03057
GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
18-76 5.45e-10

GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.


Pssm-ID: 239355 [Multi-domain]  Cd Length: 77  Bit Score: 53.69  E-value: 5.45e-10
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 953949648  18 WAVGELGLPHQ--RIDIGGPFGTTPEYQKMNPNLVVPTLEEDDGFILWESKSIIRYLAEKH 76
Cdd:cd03057   16 IALEELGLPFElvRVDLRTKTQKGADYLAINPKGQVPALVLDDGEVLTESAAILQYLADLH 76
GST_C_Ure2p_like cd03178
C-terminal, alpha helical domain of Ure2p and related Glutathione S-transferase-like proteins; ...
88-197 5.93e-10

C-terminal, alpha helical domain of Ure2p and related Glutathione S-transferase-like proteins; Glutathione S-transferase (GST) C-terminal domain family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p, YfcG and YghU from Escherichia coli, and related GST-like proteins. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. YfcG and YghU are two of the nine GST homologs in the genome of Escherichia coli. They display very low or no GSH transferase, but show very good disulfide bond oxidoreductase activity. YghU also shows modest organic hydroperoxide reductase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST active site is located in a cleft between the N- and C-terminal domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.


Pssm-ID: 198288 [Multi-domain]  Cd Length: 110  Bit Score: 54.56  E-value: 5.93e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  88 RARASQWMDWQLSVQGPAITPVFWGLvRTPPEKrDPVAIDAAKKKITAAMNILNDALGKTEFVAGSDFSYGDI---PVGV 164
Cdd:cd03178    2 RAEVLQWLFFQMSGLGPMFGQAGHFL-YFAPEK-IPYAIERYTDEVKRLYGVLDKRLSDRPYLAGEEYSIADIalyPWTH 79
                         90       100       110
                 ....*....|....*....|....*....|...
gi 953949648 165 QAYRYYrlLDDRPAQPNLDRWYAAISSRPAFKE 197
Cdd:cd03178   80 YADLGG--FADLSEYPNVKRWLERIAARPAVQK 110
GST_N_4 cd03056
GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with ...
2-73 6.52e-10

GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.


Pssm-ID: 239354 [Multi-domain]  Cd Length: 73  Bit Score: 53.35  E-value: 6.52e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 953949648   2 LKIWGRNTSSNVQMAMWAVGELGLPHQRIDIGGPFGTT--PEYQKMNPNLVVPTLEeDDGFILWESKSIIRYLA 73
Cdd:cd03056    1 MKLYGFPLSGNCYKVRLLLALLGIPYEWVEVDILKGETrtPEFLALNPNGEVPVLE-LDGRVLAESNAILVYLA 73
GST_N_Delta_Epsilon cd03045
GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved ...
39-74 1.24e-09

GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.


Pssm-ID: 239343 [Multi-domain]  Cd Length: 74  Bit Score: 52.61  E-value: 1.24e-09
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 953949648  39 TPEYQKMNPNLVVPTLEeDDGFILWESKSIIRYLAE 74
Cdd:cd03045   40 KPEFLKLNPQHTVPTLV-DNGFVLWESHAILIYLVE 74
PRK10542 PRK10542
glutathionine S-transferase; Provisional
41-201 2.19e-09

glutathionine S-transferase; Provisional


Pssm-ID: 182533 [Multi-domain]  Cd Length: 201  Bit Score: 54.69  E-value: 2.19e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  41 EYQKMNPNLVVPTLEEDDGFILWESKSIIRYLAEK--HNGAILPKDVRQRARASQWMDWQLSVQGPAITPVFwgLVRTPP 118
Cdd:PRK10542  42 DYLAINPKGQVPALLLDDGTLLTEGVAIMQYLADSvpDRQLLAPVGSLSRYHTIEWLNYIATELHKGFTPLF--RPDTPE 119
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648 119 EKRdPVAIDAAKKKITaamnILNDALGKTEFVAGSDFSYGDipvgvqAY-----RYYRLLD-DRPAQPNLDRWYAAISSR 192
Cdd:PRK10542 120 EYK-PTVRAQLEKKFQ----YVDEALADEQWICGQRFTIAD------AYlftvlRWAYAVKlNLEGLEHIAAYMQRVAER 188

                 ....*....
gi 953949648 193 PAFKEQVAA 201
Cdd:PRK10542 189 PAVAAALKA 197
GST_C_family cd00299
C-terminal, alpha helical domain of the Glutathione S-transferase family; Glutathione ...
93-189 2.42e-09

C-terminal, alpha helical domain of the Glutathione S-transferase family; Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Based on sequence similarity, different classes of GSTs have been identified, which display varying tissue distribution, substrate specificities and additional specific activities. In humans, GSTs display polymorphisms which may influence individual susceptibility to diseases such as cancer, arthritis, allergy and sclerosis. Some GST family members with non-GST functions include glutaredoxin 2, the CLIC subfamily of anion channels, prion protein Ure2p, crystallins, metaxins, stringent starvation protein A, and aminoacyl-tRNA synthetases.


Pssm-ID: 198286 [Multi-domain]  Cd Length: 100  Bit Score: 52.50  E-value: 2.42e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  93 QWMDWQLSVQGPAITPVFWglVRTPPEKRDPVAIDAAKKKITAAMNILNDALGKTEFVAGSDFSYGDIPVGVQAYRYYRL 172
Cdd:cd00299    3 ALEDWADATLAPPLVRLLY--LEKVPLPKDEAAVEAAREELPALLAALEQLLAGRPYLAGDQFSLADVALAPVLARLEAL 80
                         90       100
                 ....*....|....*....|
gi 953949648 173 L---DDRPAQPNLDRWYAAI 189
Cdd:cd00299   81 GpyyDLLDEYPRLKAWYDRL 100
GST_N_Phi cd03053
GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related ...
2-75 7.77e-09

GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including transport of flavonoid pigments to the vacuole, shoot regeneration and GSH peroxidase activity.


Pssm-ID: 239351 [Multi-domain]  Cd Length: 76  Bit Score: 50.73  E-value: 7.77e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 953949648   2 LKIWGRNTSSNVQMAMWAVGELGLPHQRI--DIGGPFGTTPEYQKMNPNLVVPTLEeDDGFILWESKSIIRYLAEK 75
Cdd:cd03053    2 LKLYGAAMSTCVRRVLLCLEEKGVDYELVpvDLTKGEHKSPEHLARNPFGQIPALE-DGDLKLFESRAITRYLAEK 76
GST_C_YfcG_like cd10291
C-terminal, alpha helical domain of Escherichia coli YfcG Glutathione S-transferases and ...
87-197 3.22e-08

C-terminal, alpha helical domain of Escherichia coli YfcG Glutathione S-transferases and related uncharacterized proteins; Glutathione S-transferase (GST) C-terminal domain family, YfcG-like subfamily; composed of the Escherichia coli YfcG and related proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST active site is located in a cleft between the N- and C-terminal domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. YfcG is one of nine GST homologs in Escherichia coli. It is expressed predominantly during the late stationary phase where the predominant form of GSH is glutathionylspermidine (GspSH), suggesting that YfcG might interact with GspSH. It has very low or no GSH transferase or peroxidase activity, but displays a unique disulfide bond reductase activity that is comparable to thioredoxins (TRXs) and glutaredoxins (GRXs). However, unlike TRXs and GRXs, YfcG does not contain a redox active cysteine residue and may use a bound thiol disulfide couple such as 2GSH/GSSG for activity. The crystal structure of YcfG reveals a bound GSSG molecule in its active site. The actual physiological substrates for YfcG are yet to be identified.


Pssm-ID: 198324 [Multi-domain]  Cd Length: 110  Bit Score: 49.96  E-value: 3.22e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  87 QRARASQWMDWQLSVQGPAI--TPVFwglVRTPPEKRdPVAIDAAKKKITAAMNILNDALGKTEFVAGSDFSYGDIPVGV 164
Cdd:cd10291    1 ERYAVLQWLMWQMGGLGPMQgqAHHF---KRYAPEKI-PYAIKRYTNETKRLYGVLDRRLAKSKYLAGDEYSIADIAIWP 76
                         90       100       110
                 ....*....|....*....|....*....|...
gi 953949648 165 QAYRYYRLLDDRPAQPNLDRWYAAISSRPAFKE 197
Cdd:cd10291   77 WVARHEWQGIDLADFPNLKRWFERLAARPAVQK 109
GST_N_Theta cd03050
GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial ...
38-76 6.10e-08

GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DCM as sole carbon and energy sources. The presence of polymorphisms in human GSTT1-1 and its relationship to the onset of diseases including cancer is subject of many studies. Human GSTT2-2 exhibits a highly specific sulfatase activity, catalyzing the cleavage of sulfate ions from aralkyl sufate esters, but not from aryl or alkyl sulfate esters.


Pssm-ID: 239348 [Multi-domain]  Cd Length: 76  Bit Score: 48.01  E-value: 6.10e-08
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 953949648  38 TTPEYQKMNPNLVVPTLEeDDGFILWESKSIIRYLAEKH 76
Cdd:cd03050   39 LTPEFKKINPFGKVPAIV-DGDFTLAESVAILRYLARKF 76
GST_N pfam02798
Glutathione S-transferase, N-terminal domain; Function: conjugation of reduced glutathione to ...
2-74 8.97e-08

Glutathione S-transferase, N-terminal domain; Function: conjugation of reduced glutathione to a variety of targets. Also included in the alignment, but not GSTs: S-crystallins from squid (similarity to GST previously noted); eukaryotic elongation factors 1-gamma (not known to have GST activity and similarity not previously recognized); HSP26 family of stress-related proteins including auxin-regulated proteins in plants and stringent starvation proteins in E. coli (not known to have GST activity and similarity not previously recognized). The glutathione molecule binds in a cleft between the N- and C-terminal domains - the catalytically important residues are proposed to reside in the N-terminal domain.


Pssm-ID: 460698 [Multi-domain]  Cd Length: 76  Bit Score: 47.69  E-value: 8.97e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 953949648    2 LKIWGRNTSSNVQMAMWAVGELGLPHQ--RIDIGGPFGTTPEYQKMNPNLVVPTLEeDDGFILWESKSIIRYLAE 74
Cdd:pfam02798   3 LTLYGIRGSPRAHRIRWLLAEKGVEYEivPLDFGAGPEKSPELLKLNPLGKVPALE-DGGKKLTESRAILEYIAR 76
maiA TIGR01262
maleylacetoacetate isomerase; Maleylacetoacetate isomerase is an enzyme of tyrosine and ...
39-91 1.05e-07

maleylacetoacetate isomerase; Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism. [Energy metabolism, Amino acids and amines]


Pssm-ID: 273527 [Multi-domain]  Cd Length: 210  Bit Score: 50.40  E-value: 1.05e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 953949648   39 TPEYQKMNPNLVVPTLeEDDGFILWESKSIIRYLAEKHNG-AILPKDVRQRARA 91
Cdd:TIGR01262  40 SPEFLALNPQGLVPTL-DIDGEVLTQSLAIIEYLEETYPDpPLLPADPIKRARV 92
PRK15113 PRK15113
glutathione transferase;
15-97 1.16e-07

glutathione transferase;


Pssm-ID: 185068 [Multi-domain]  Cd Length: 214  Bit Score: 49.96  E-value: 1.16e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  15 MAMW-AVGELGLPHQ--RIDIGGPFGTTPEYQKMNPNLVVPTLEEDDgFILWESKSIIRYLAEK----HNGAILPKDVRQ 87
Cdd:PRK15113  20 MSAFvALQEKGLPFElkTVDLDAGEHLQPTYQGYSLTRRVPTLQHDD-FELSESSAIAEYLEERfappAWERIYPADLQA 98
                         90
                 ....*....|
gi 953949648  88 RARASQWMDW 97
Cdd:PRK15113  99 RARARQIQAW 108
GST_C_Beta cd03188
C-terminal, alpha helical domain of Class Beta Glutathione S-transferases; Glutathione ...
86-197 2.73e-07

C-terminal, alpha helical domain of Class Beta Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they are involved in the protection against oxidative stress and are able to bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs, contributing to antibiotic resistance. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH. One member of this subfamily is a GST from Burkholderia xenovorans LB400 that is encoded by the bphK gene and is part of the biphenyl catabolic pathway.


Pssm-ID: 198297 [Multi-domain]  Cd Length: 113  Bit Score: 47.24  E-value: 2.73e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  86 RQRARASQWMDWQLSVQGPAITPVFWGLVRTPPEKRDPVaIDAAKKKITAAMNILNDALGKTEFVAGSDFSYGDipvgvq 165
Cdd:cd03188    1 LERARLLEWLNFIASELHKAFGPLFYPARWADDALAEEV-KAAARERLERRLAYLDAQLAGGPYLLGDQFSVAD------ 73
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 953949648 166 AY--------RYYRLldDRPAQPNLDRWYAAISSRPAFKE 197
Cdd:cd03188   74 AYlfvvlrwaRAVGL--DLSDWPHLAAYLARVAARPAVQA 111
GST_C_GTT2_like cd03182
C-terminal, alpha helical domain of GTT2-like Glutathione S-transferases; Glutathione ...
130-195 1.79e-06

C-terminal, alpha helical domain of GTT2-like Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the Saccharomyces cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.


Pssm-ID: 198291 [Multi-domain]  Cd Length: 116  Bit Score: 45.01  E-value: 1.79e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 953949648 130 KKKITAAMNILNDALGKTEFVAGSDFSYGDIpVGVQAYRYYRLLDDRP--AQPNLDRWYAAISSRPAF 195
Cdd:cd03182   50 KKRVIDFLPVLDKRLAESPYVAGDRFSIADI-TAFVALDFAKNLKLPVpeELTALRRWYERMAARPSA 116
GST_N_GTT2_like cd03051
GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly ...
2-72 2.09e-06

GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.


Pssm-ID: 239349 [Multi-domain]  Cd Length: 74  Bit Score: 43.83  E-value: 2.09e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 953949648   2 LKIWGRNTSSNVQMAMWAVGELG--LPHQRIDIGGPFGTTPEYQKMNPNLVVPTLEEDDGFILWESKSIIRYL 72
Cdd:cd03051    1 MKLYDSPTAPNPRRVRIFLAEKGidVPLVTVDLAAGEQRSPEFLAKNPAGTVPVLELDDGTVITESVAICRYL 73
GST_C_Theta cd03183
C-terminal, alpha helical domain of Class Theta Glutathione S-transferases; Glutathione ...
88-197 2.89e-06

C-terminal, alpha helical domain of Class Theta Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DCM as sole carbon and energy sources. The presence of polymorphisms in human GSTT1-1 and its relationship to the onset of diseases including cancer is the subject of many studies. Human GSTT2-2 exhibits a highly specific sulfatase activity, catalyzing the cleavage of sulfate ions from aralkyl sufate esters, but not from the aryl or alkyl sulfate esters.


Pssm-ID: 198292 [Multi-domain]  Cd Length: 126  Bit Score: 44.90  E-value: 2.89e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  88 RARASQWMDWQ-LSVQGPAiTPVFWGLVRTP---PEKRDPVAIDAAKKKITAAMNILNDA-LGKTEFVAGSDFSYGDI-- 160
Cdd:cd03183    2 RARVDEYLAWQhTNLRLGC-AAYFWQKVLLPlfgGTPVSPEKVKKAEENLEESLDLLENKfLKDKPFLAGDEISIADLsa 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 953949648 161 ------PVGVQayryYRLLDDRpaqPNLDRWYAAISSR--PAFKE 197
Cdd:cd03183   81 iceimqPEAAG----YDVFEGR---PKLAAWRKRVKEAgnPLFDE 118
GST_C_2 pfam13410
Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.
125-188 6.29e-06

Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.


Pssm-ID: 433185 [Multi-domain]  Cd Length: 67  Bit Score: 42.31  E-value: 6.29e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 953949648  125 AIDAAKKKITAAMNILNDALGKTEFVAGSDFSYGDI---PVGVQAYRYYRLLDDRPAQPNLDRWYAA 188
Cdd:pfam13410   1 ALERAREQLRAALDALEARLADGPGLLGDRPTLADIalaPVLARLDAAYPGLDLREGYPRLRAWLER 67
GST_N_Zeta cd03042
GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
39-72 1.92e-05

GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.


Pssm-ID: 239340 [Multi-domain]  Cd Length: 73  Bit Score: 41.40  E-value: 1.92e-05
                         10        20        30
                 ....*....|....*....|....*....|....
gi 953949648  39 TPEYQKMNPNLVVPTLeEDDGFILWESKSIIRYL 72
Cdd:cd03042   40 SPAYRALNPQGLVPTL-VIDGLVLTQSLAIIEYL 72
GST_N_EF1Bgamma cd03044
GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part ...
39-75 2.37e-05

GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in protein biosynthesis, EF1Bgamma may also display other functions. The recombinant rice protein has been shown to possess GSH conjugating activity. The yeast EF1Bgamma binds membranes in a calcium dependent manner and is also part of a complex that binds to the msrA (methionine sulfoxide reductase) promoter suggesting a function in the regulation of its gene expression.


Pssm-ID: 239342 [Multi-domain]  Cd Length: 75  Bit Score: 41.09  E-value: 2.37e-05
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 953949648  39 TPEYQKMNPNLVVPTLEEDDGFILWESKSIIRYLAEK 75
Cdd:cd03044   39 TPEFLKKFPLGKVPAFEGADGFCLFESNAIAYYVANL 75
GST_C pfam00043
Glutathione S-transferase, C-terminal domain; GST conjugates reduced glutathione to a variety ...
104-193 2.44e-05

Glutathione S-transferase, C-terminal domain; GST conjugates reduced glutathione to a variety of targets including S-crystallin from squid, the eukaryotic elongation factor 1-gamma, the HSP26 family of stress-related proteins and auxin-regulated proteins in plants. Stringent starvation proteins in E. coli are also included in the alignment but are not known to have GST activity. The glutathione molecule binds in a cleft between N and C-terminal domains. The catalytically important residues are proposed to reside in the N-terminal domain. In plants, GSTs are encoded by a large gene family (48 GST genes in Arabidopsis) and can be divided into the phi, tau, theta, zeta, and lambda classes.


Pssm-ID: 459647 [Multi-domain]  Cd Length: 93  Bit Score: 41.50  E-value: 2.44e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  104 PAITPVFWGLVRTPPEKRDPVAiDAAKKKITAAMNILNDALGKTEFVAGSDFSYGDIpVGVQAYRYYRLLD---DRPAQP 180
Cdd:pfam00043   3 DLRMQIALLPYVPPEEKKEPEV-DEALEKVARVLSALEEVLKGQTYLVGDKLTLADI-ALAPALLWLYELDpacLREKFP 80
                          90
                  ....*....|...
gi 953949648  181 NLDRWYAAISSRP 193
Cdd:pfam00043  81 NLKAWFERVAARP 93
GST_C_Delta_Epsilon cd03177
C-terminal, alpha helical domain of Class Delta and Epsilon Glutathione S-transferases; ...
106-197 8.58e-05

C-terminal, alpha helical domain of Class Delta and Epsilon Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.


Pssm-ID: 198287 [Multi-domain]  Cd Length: 117  Bit Score: 40.59  E-value: 8.58e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648 106 ITPVFWGLVRTPPEKrdpvaidaaKKKITAAMNILNDALGKTEFVAGSDFSYGDIP----------VGVQAYRYyrlldd 175
Cdd:cd03177   25 YYPILFGGAEPPEEK---------LDKLEEALEFLETFLEGSDYVAGDQLTIADLSlvatvstlevVGFDLSKY------ 89
                         90       100
                 ....*....|....*....|..
gi 953949648 176 rpaqPNLDRWYAAISSRPAFKE 197
Cdd:cd03177   90 ----PNVAAWYERLKALPPGEE 107
PRK10387 PRK10387
glutaredoxin 2; Provisional
50-147 3.05e-04

glutaredoxin 2; Provisional


Pssm-ID: 236679 [Multi-domain]  Cd Length: 210  Bit Score: 40.25  E-value: 3.05e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  50 VVPTLEEDDGFILWESKSIIRYLAEKHNGAILPKDVRQRARasqwmDWQLSVQGPA---ITPVFWGLVRtpPEKRDPVAI 126
Cdd:PRK10387  47 QVPILQKDDGSYMPESLDIVHYIDELDGKPLLTGKRSPAIE-----EWLRKVFGYLnklLYPRFAKADL--PEFATPSAR 119
                         90       100
                 ....*....|....*....|.
gi 953949648 127 DAAKKKITAAMNILNDALGKT 147
Cdd:PRK10387 120 QYFIDKKEASIGDFDALLAHT 140
GST_C_GTT1_like cd03189
C-terminal, alpha helical domain of GTT1-like Glutathione S-transferases; Glutathione ...
87-193 3.54e-04

C-terminal, alpha helical domain of GTT1-like Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pombe GST-III is implicated in the detoxification of various metals.


Pssm-ID: 198298 [Multi-domain]  Cd Length: 123  Bit Score: 38.83  E-value: 3.54e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  87 QRARASQWMDWqlsVQGPAITP-----VFWGLVRTPPEKRDPVAIDAAKK--------KITAAMNILNDALGKTEFVAGS 153
Cdd:cd03189    7 EYADYLYWLHF---AEGSLMPPlllklVFGKIGEAPPPFFRPISRKIADKplqafinpELKRHLDFLEDHLAKHPYFAGD 83
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 953949648 154 DFSYGDIPVG--VQAYRYYRLLDDRPaqPNLDRWYAAISSRP 193
Cdd:cd03189   84 ELTAADIMMSfpLEAALARGPLLEQY--PNIAAYLERIEARP 123
GST_C_YghU_like cd10292
C-terminal, alpha helical domain of Escherichia coli Yghu Glutathione S-transferases and ...
88-196 3.22e-03

C-terminal, alpha helical domain of Escherichia coli Yghu Glutathione S-transferases and related uncharacterized proteins; Glutathione S-transferase (GST) C-terminal domain family, YghU-like subfamily; composed of the Escherichia coli YghU and related proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST active site is located in a cleft between the N- and C-terminal domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. YghU is one of nine GST homologs in the genome of Escherichia coli. It is similar to Escherichia coli YfcG in that it has poor GSH transferase activity towards typical substrates. It shows modest reductase activity towards some organic hydroperoxides. Like YfcG, YghU also shows good disulfide bond oxidoreductase activity comparable to the activities of glutaredoxins and thioredoxins. YghU does not contain a redox active cysteine residue, and may use a bound thiol disulfide couple such as 2GSH/GSSG for activity. The crystal structure of YghU reveals two GSH molecules bound in its active site.


Pssm-ID: 198325 [Multi-domain]  Cd Length: 118  Bit Score: 36.29  E-value: 3.22e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953949648  88 RARASQWMDWQLSvQGPAITPVFWGLVRTPPEKRDpVAIDAAKKKITAAMNILNDALGKTEFVAGSDFSYGDIPVgvqaY 167
Cdd:cd10292    2 RTETLNWLFWQMG-SAPYLGGGFGHFYSYAPVKIE-YAIDRFTMEAKRQLDVLDRQLATHKYLAGDEYTIADMAI----W 75
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 953949648 168 RYY------RLLD-----DRPAQPNLDRWYAAISSRPAFK 196
Cdd:cd10292   76 PWYgglalgSLYDaaeflDVDEYKHVQRWAKDIAARPAVK 115
GST_C_AaRS_like cd10289
Glutathione S-transferase C-terminal-like, alpha helical domain of various Aminoacyl-tRNA ...
128-191 5.39e-03

Glutathione S-transferase C-terminal-like, alpha helical domain of various Aminoacyl-tRNA synthetases and similar domains; Glutathione S-transferase (GST) C-terminal domain family, Aminoacyl-tRNA synthetase (AaRS)-like subfamily; This model characterizes the GST_C-like domain found in the N-terminal region of some eukaryotic AaRSs, as well as similar domains found in proteins involved in protein synthesis including Aminoacyl tRNA synthetase complex-Interacting Multifunctional Protein 2 (AIMP2), AIMP3, and eukaryotic translation Elongation Factor 1 beta (eEF1b). AaRSs comprise a family of enzymes that catalyze the coupling of amino acids with their matching tRNAs. This involves the formation of an aminoacyl adenylate using ATP, followed by the transfer of the activated amino acid to the 3'-adenosine moiety of the tRNA. AaRSs may also be involved in translational and transcriptional regulation, as well as in tRNA processing. AaRSs in this subfamily include GluRS from lower eukaryotes, as well as GluProRS, MetRS, and CysRS from higher eukaryotes. AIMPs are non-enzymatic cofactors that play critical roles in the assembly and formation of a macromolecular multi-tRNA synthetase protein complex found in higher eukaryotes. The GST_C-like domain is involved in protein-protein interactions, mediating the formation of aaRS complexes such as the MetRS-Arc1p-GluRS ternary complex in lower eukaryotes and the multi-aaRS complex in higher eukaryotes, that act as molecular hubs for protein synthesis. AaRSs from prokaryotes, which are active as dimers, do not contain this GST_C-like domain.


Pssm-ID: 198322 [Multi-domain]  Cd Length: 82  Bit Score: 34.60  E-value: 5.39e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 953949648 128 AAKKKITAAMNILNDALGKTEFVAGSDFSYGDIPVGVQAYRYYRLLDD--RPAQPNLDRWYAAISS 191
Cdd:cd10289   16 LKGKELEALLKSLNSYLASRTFLVGYSLTLADVAVFSALYPSGQKLSDkeKKKFPHVTRWFNHIQN 81
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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