|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-697 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1321.82 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 1 PLPVPILIGVGLLLFPTATKNLRRIWAFPSILLLMIVMIFSIDLSIHQIQNSSIYQYVWSWTINNDISLEFGYLLDSLTS 80
Cdd:CHL00025 15 PLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINNDFSLEFGYLIDPLTS 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 81 IMSILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKA 160
Cdd:CHL00025 95 IMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANA 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 161 CQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFNNLIYNNEVSIFFVTFCAIFLFCGSVAKSAQFPLHVWLPDAM 240
Cdd:CHL00025 175 CQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAM 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 241 EGPTPISALIHAATMVAAGIFLVARLLPLFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLAL 320
Cdd:CHL00025 255 EGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLAL 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 321 GMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACF 400
Cdd:CHL00025 335 GIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACF 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 401 WSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGYLNVHFQNFNGKKNSSFYSISLWGkegKKKLKKKIHLL 480
Cdd:CHL00025 415 WSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWG---KEESKKINKLL 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 481 ALLTMNNNERTSFFRKRKYsnTINRNVKSIKRLFveSTSFGTKNIpFFNPHESDNTMLFSMLVLVLFTFFVGSIGISFSQ 560
Cdd:CHL00025 492 LLLTMNNNERVSFFSKKTY--KIDGNVRNMIRSF--ITIFGNKKT-FSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQ 566
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 561 DGIDLDILSKLLIPSIDLLHQNSKNSVDWYEFLTNATFSVSIAFFGILIASFLYKPVFSSLQNLNVLNFFQKSVTKKIIP 640
Cdd:CHL00025 567 EGIDLDILSKWLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINSFVKGGPKRIFL 646
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*..
gi 192807063 641 DKIINLIYDWSYNRGYIDAFFEVSLIASVRKLAKFNYFFDRQIIDGIPNGVGISSFF 697
Cdd:CHL00025 647 DKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITSFF 703
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-693 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 635.91 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 1 PLPVPILIGVGLLLFPTATKNLRRIWAFPSILLLMIVMIFSIDLSIHQIQNSSIYQYVWSWTINNDISLEFGYLLDSLTS 80
Cdd:PRK07376 15 PLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGDFHLPMGYVIDPLGA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 81 IMSILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKA 160
Cdd:PRK07376 95 VMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADA 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 161 CQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFNNLIYNNEVSIFFVTFCAIFLFCGSVAKSAQFPLHVWLPDAM 240
Cdd:PRK07376 175 AQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDAM 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 241 EGPTPISALIHAATMVAAGIFLVARLLPLFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLAL 320
Cdd:PRK07376 255 EGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAM 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 321 GMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACF 400
Cdd:PRK07376 335 GCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGF 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 401 WSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGylnvhfqNFNGkknssfysislwgkegkkklkkkihll 480
Cdd:PRK07376 415 WSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEG-------EFRG--------------------------- 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 481 alltmNNNE-RTSFFRKRKYSNTINRNVKSIKRLFVESTSfgtknipffnPHESDNTMLFSMLVLVLFTFFVGSIGISFS 559
Cdd:PRK07376 461 -----NDKElQKELLAAADAPGHHEGHHEEHGEHHHHSGS----------PHESPWTMTLPLVVLAVPSVLIGLLGTPWN 525
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 560 qdgidlDILSKLLIPSIDLLHQnsKNSVDWYEFLTNATFSVSIAFFGILIASFLYkpvfsslqnlnvlnfFQKSVTKKII 639
Cdd:PRK07376 526 ------NRFEAFLHAPGEALEA--AAHFEWGEFLILAGASVGIALIGITLASLMY---------------LLKKIDPAAI 582
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....
gi 192807063 640 PDKIINLiYDWSYNRGYIDAFFEVSLIASVRKLAKFNYFFDRQIIDGIPNGVGI 693
Cdd:PRK07376 583 AERFPPL-YQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTGL 635
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
4-692 |
2.93e-175 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 513.55 E-value: 2.93e-175
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 4 VPILIGVGLLLFPTATKNLRRIWAFpSILLLMIVMIFSIDLSIH-QIQNSSIYQYVWSWTINNDISLEFGYLLDSLTSIM 82
Cdd:COG1009 7 IPLLPLLGALLAGLLGRRLGRRAAG-WLAALAPLAAFVLSLLLFpAVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLM 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 83 SILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKACQ 162
Cdd:COG1009 86 LLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAAR 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 163 KAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFNNLIynnevSIFFVTFCAIFLFCGSVAKSAQFPLHVWLPDAMEG 242
Cdd:COG1009 166 KAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIL-----SSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 243 PTPISALIHAATMVAAGIFLVARLLPLFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGM 322
Cdd:COG1009 241 PTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 323 GSYRAALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdkSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWS 402
Cdd:COG1009 321 GAYVAALFHLLTHAFFKALLFLGAGSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFS 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 403 KDEILNDSW---LYSPIFAIIACSTAGLTAFYMFRIYLLVFEGylnvhfqnfngkknssfysislwgkegkkklkkkihl 479
Cdd:COG1009 392 KEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVFFG------------------------------------- 434
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 480 lalltmnnNERTSFFRKrkysntinrnvksikrlfvestsfgtknipffnPHESDNTMLFSMLVLVLFTFFVGSIGISFS 559
Cdd:COG1009 435 --------KPRPKTPKH---------------------------------PHESPWLMTLPLVVLAVLSLVLGLLLPGLL 473
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 560 QDGIDLDilsKLLIPSIDLLHQnsknsvdwyEFLTNATFSVSIAffGILIASFLY--KPVFSSLQNLNVLnffqksvtkk 637
Cdd:COG1009 474 EGLLAPA---AVLGGELHLAHG---------LLLNALPLLLSLL--GIALGYLLYlkRPLPALAERLKPL---------- 529
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 192807063 638 iipdkiinliYDWSYNRGYIDAFFEVSLIASVRKLAKFNyFFDRQIIDGIPNGVG 692
Cdd:COG1009 530 ----------YRLLANKWYFDELYDALFVKPVRALARFL-WFDRYVIDGIVNGLA 573
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
53-692 |
6.18e-170 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 500.84 E-value: 6.18e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 53 SIYQYVWSWTINNDISLEFGYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQ 132
Cdd:PRK06590 60 AFSQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQ 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 133 VYIFWELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDlfqIFNNLIYNNEVSIFFV 212
Cdd:PRK06590 140 LFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDE---VFAAAPQFFGLGWSAL 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 213 TFCAIFLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFTVIPFIMSGIALIGIITVVLGA 292
Cdd:PRK06590 217 TLICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAA 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 293 TLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVLMGG 372
Cdd:PRK06590 297 FIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRKMGG 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 373 LTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILNDSWLYSPIFA-IIACSTAGLTAFYMFRIYLLVFegylnvhfqnf 451
Cdd:PRK06590 369 LRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANGHINLfVAGLVGAFLTAFYSFRLIFLVF----------- 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 452 ngkknssfysislwgkegkkklkkkihllalltmnnnertsffrkrkysntinrnvksikrlfvestsFGTKNIPFFNPH 531
Cdd:PRK06590 438 --------------------------------------------------------------------HGKEKEKIHHPH 449
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 532 ESDNTMLFSMLVLVLFTFFVGSIGISFsqdgidldiLSKLLIPSIDLLHQNSKNSVdwyeFLTNATFSVSIAFFGILIAS 611
Cdd:PRK06590 450 ESPAVMTLPLIVLAVLSVFAGALIVPP---------FLGVLPLTTELAHGEAEHHL----PVWVALLPLVVALAGIALAW 516
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 612 FLYKpvfsslqnlnvlnffqksvTKKIIPDKI---INLIYDWSYNRGYIDAFFEVSLIASVRKLAKF-NYFFDRQIIDGI 687
Cdd:PRK06590 517 LLYL-------------------KKPTLPTSIaapGRFLYTLLRNKYYFDELYEKVFVKPGLALARLlWKDGDDGIIDGL 577
|
....*
gi 192807063 688 PNGVG 692
Cdd:PRK06590 578 VPNSA 582
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
30-697 |
5.11e-144 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 433.63 E-value: 5.11e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 30 SILLLMIVMIFSIDLSIHQIQNSSIYQYVWSWTINNDISLEFGYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLR 109
Cdd:TIGR01974 36 SVGLSAALSAFVFVDFFLNGEGEAFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 110 FFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSL 189
Cdd:TIGR01974 116 FFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 190 EFRDLFQIFNNLIYNnevsifFVTFCAIFLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 269
Cdd:TIGR01974 196 NFQEVFALAPGAFFS------ALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPL 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 270 FTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSI 349
Cdd:TIGR01974 270 FELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSV 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 350 IHSMEaivgyspdKSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILNDSW--LYSPIFAIIACSTAGL 427
Cdd:TIGR01974 350 IHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIGAFL 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 428 TAFYMFRIYLLVfegylnvhfqnFNGKKNSSFYSislwgkegkkklkkkihllalltmnnnertsffrkrkysntinrnv 507
Cdd:TIGR01974 422 TAFYSFRLIFMV-----------FHGKERHEADA---------------------------------------------- 444
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 508 ksikrlfvestsfgtknipffNPHESDNTMLFSMLVLVLFTFFVGSIGISFsqdgidLDILSKLLIPSIDllHQNSKNSV 587
Cdd:TIGR01974 445 ---------------------HPHESPLVMLLPLIVLAVGSVFAGFFIVPL------FEFLKGVLPTSAE--PALEHHHV 495
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 588 DWYEFLTnatfSVSIAFFGILIASFLYkpvfssLQNLNVLNFFQKSVTKkiipdkiinlIYDWSYNRGYIDAFFEVSLIA 667
Cdd:TIGR01974 496 PALEIWS----PTAVAILGILLAYLLY------LGNPTLPAKIAQRHSG----------LYRLLLNKWYFDELYDKVFVK 555
|
650 660 670
....*....|....*....|....*....|.
gi 192807063 668 SVRKLAKFNYFF-DRQIIDGIPNGVGISSFF 697
Cdd:TIGR01974 556 PYLFLGKLLWKDpDDKIIDGFGPGIARLVGA 586
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
434-680 |
2.09e-125 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 372.33 E-value: 2.09e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 434 RIYLLVFEGYLNVHFQNFNGKKNSSFYSISLWGKEGKKKLKKKIHLLALLTMNNNERTSFFRKRKYSntINRNVKSIKRL 513
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTLLLLTMNNNEKVSFFSKKTYR--IDGNVRNMTRP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 514 FVESTSFGTKNIPFFnPHESDNTMLFSMLVLVLFTFFVGSIGISFSQDGIDLDILSKLLIPSIDLLHQNSKNSVDWYEFL 593
Cdd:pfam01010 79 FITITHFDNKKTFSY-PHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNSNNSVDWYEFV 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 594 TNATFSVSIAFFGILIASFLYKPVFSSLQNLNVLNFFQKSVTKKIIPDKIINLIYDWSYNRGYIDAFFEVSLIASVRKLA 673
Cdd:pfam01010 158 TNAIFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLA 237
|
....*..
gi 192807063 674 KFNYFFD 680
Cdd:pfam01010 238 ELTHFFD 244
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
52-460 |
1.43e-103 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 328.89 E-value: 1.43e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 52 SSIYQYVWSWTINNDISLEFGYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLI 131
Cdd:MTH00210 55 SATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYV 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 132 QVYIFWELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFNNLIYNNEVSIFf 211
Cdd:MTH00210 135 QLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESLTII- 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 212 vtfcAIFLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFTVIPFIMSGIALIGIITVVLG 291
Cdd:MTH00210 214 ----CLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFA 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 292 ATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVLMG 371
Cdd:MTH00210 290 ATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV--------SDEQDMRKMG 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 372 GLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILNDSW-LYSPIFAI-IACSTAGLTAFYMFRIYLLVFEGYLNVHFQ 449
Cdd:MTH00210 362 GLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdKYYIAFAYwLGSFSALLTAFYSIRLIYLTFITNTNSKKE 441
|
410
....*....|.
gi 192807063 450 NFNGKKNSSFY 460
Cdd:MTH00210 442 VFIGVHESSWN 452
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
33-459 |
1.51e-103 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 328.57 E-value: 1.51e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 33 LLMIVMIFSIDLSIHQIQNSS-IYQYVWSWTINNDISLEFGYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLRFF 111
Cdd:MTH00020 35 CLIISLSWSFLIFYEILFNSStTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFM 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 112 TYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEF 191
Cdd:MTH00020 115 SYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDF 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 192 RDlfqIFNNLIYNNEVSIFFVTFcaiFLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFT 271
Cdd:MTH00020 195 SS---VFNMVVSAPSSDITLICL---FLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFE 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 272 VIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIH 351
Cdd:MTH00020 269 QAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIH 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 352 SMeaivgyspDKSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILNDSWL-YSPIFAI-IACSTAGLTA 429
Cdd:MTH00020 349 AL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGqYYLIFAYwLGCFSALLTA 420
|
410 420 430
....*....|....*....|....*....|
gi 192807063 430 FYMFRIYLLVFEGYLNVHFQNFNGKKNSSF 459
Cdd:MTH00020 421 FYSIRLIYLTFLSNTNLKKAVFFHLHEGDW 450
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
6-446 |
7.05e-85 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 279.14 E-value: 7.05e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 6 ILIGVGLLLFPTATKNlrriWAFPSILLLMIVMIFSIDLSIHQIQNSSIYQyvWSWTINNDISLEFGYLLDSLTSIMSIL 85
Cdd:MTH00211 14 ILLLLPLLLPLNNSKL----HIKKAVKLSFFISLIPLLIFLDQGLETILTN--WSWINLGLFSLNLSFKFDFYSIFFTSV 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 86 ITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKACQKAF 165
Cdd:MTH00211 88 ALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 166 VTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFNNLiynnevsiffvTFCAIFLFCGSVAKSAQFPLHVWLPDAMEGPTP 245
Cdd:MTH00211 168 IYNRIGDIGLLLSMVWLLLNLNSWEISQLFILNLDL-----------TLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 246 ISALIHAATMVAAGIFLVARLLPLFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSY 325
Cdd:MTH00211 237 VSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQP 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 326 RAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDE 405
Cdd:MTH00211 317 QLAFLHICTHAFFKAMLFMCSGSIIHGL--------NNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDL 388
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 192807063 406 IL---NDSWLYSPIFAIIACSTaGLTAFYMFRIYLLVFEGYLNV 446
Cdd:MTH00211 389 ILesmNGSYLNAWALLLTLLAT-SLTAAYSFRLIFLSLGGYPRF 431
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
49-407 |
1.15e-80 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 269.91 E-value: 1.15e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 49 IQNSSIYQYVWSWTINNDISLEFGYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSS 128
Cdd:MTH00032 52 INDAVVHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 129 NLIQVYIFWELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDL------FQIFNNLI 202
Cdd:MTH00032 132 NYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgSGIMDRGY 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 203 YN---NEVSIFFVTFCAIFLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFTVIPFIMSG 279
Cdd:MTH00032 212 YGggaYESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLI 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 280 IALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGM-GSYRAALFHLITHAYSKALLFLGSGSIIHSMEAivg 358
Cdd:MTH00032 292 ITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV--- 368
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 192807063 359 yspdKSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEIL 407
Cdd:MTH00032 369 ----DEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
127-426 |
1.65e-77 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 249.92 E-value: 1.65e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 127 SSNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFNNLIYNNE 206
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 207 vsiffVTFCAIFLFCGSVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF-TVIPFIMSGIALIG 284
Cdd:pfam00361 81 -----LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 285 IITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIIHSMEaivgysp 361
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV------- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 192807063 362 dKSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAG 426
Cdd:pfam00361 228 -HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
13-443 |
1.97e-75 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 254.32 E-value: 1.97e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 13 LLFPTATKNLRRiwaFPSILLLMIVMIFSIDL-----SIHQIQNSSIYQYVWSWTINNDISLEFgyLLDSLtsimSILIT 87
Cdd:MTH00004 20 ILLPLLSKNLKN---SPTTIKTTVKLAFLISLipltlFLNSGTESITTNWPWIFTTTFNIPISF--KLDQY----SLMFL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 88 TVGILV----LMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKACQK 163
Cdd:MTH00004 91 PIALFVtwsiLEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQ 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 164 AFVTNRVGDFGLLLGILglyWITGSLEFRDLFQIFNNLIYNnevsiffvTFCAIFLFCGSVAKSAQFPLHVWLPDAMEGP 243
Cdd:MTH00004 171 AIIYNRIGDIGLILSMA---WLAMTLNTWEIQQLFSPTQTP--------TLPLLGLILAATGKSAQFGLHPWLPAAMEGP 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 244 TPISALIHAATMVAAGIFLVARLLPLFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMG 323
Cdd:MTH00004 240 TPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLN 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 324 SYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSK 403
Cdd:MTH00004 320 QPQLAFLHISTHAFFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSK 391
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 192807063 404 D---EILNDSWLYSPIFAIIACSTAgLTAFYMFRIYLLVFEGY 443
Cdd:MTH00004 392 DtiiETLNTSYLNAWALLLTLLATS-FTAAYSLRMILLVQTGF 433
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
30-440 |
4.48e-74 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 251.04 E-value: 4.48e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 30 SILLLMIVMIFSIDLSIHQIQNS--SIYQYVWSWTINNDISLEFGYLLDSLtsimSILITTVGILV----LMYSDNYMSH 103
Cdd:MTH00208 58 SISLLKTLAFLSLINLLIWILLGcpNINISLSNWLSNTLFNFSLSFIFDFY----FILFFSVALFVtwsiIEFSHYYMSN 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 104 DQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRVGD--FGLLLGILG 181
Cdd:MTH00208 134 DPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDigIILFLSLSL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 182 LYWITGSLefrdlfqifNNLIYNNEVSIFFVTFCAIFLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF 261
Cdd:MTH00208 214 INFNSWNL---------NEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVF 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 262 LVARLLPLFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKAL 341
Cdd:MTH00208 285 LLIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAM 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 342 LFLGSGSIIHSMeaivgyspDKSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEIL-----NDSWLYSPI 416
Cdd:MTH00208 365 LFLCSGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILeaglaSISNLLSII 436
|
410 420
....*....|....*....|....
gi 192807063 417 FAIIACStagLTAFYMFRIYLLVF 440
Cdd:MTH00208 437 LALIATL---LTAVYSFRIIFFCF 457
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
48-697 |
1.63e-73 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 249.44 E-value: 1.63e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 48 QIQNSSIYQYVWSWTINNDISLEFGYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTS 127
Cdd:PRK07390 60 AIWNQPPQQLSFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALS 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 128 SNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFNnliyNNEV 207
Cdd:PRK07390 140 DSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAA----TANL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 208 SIFFVTFCAIFLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFTVIPFIMSGIALIGIIT 287
Cdd:PRK07390 216 DPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVT 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 288 VVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSmeaivgyspDKSQNM 367
Cdd:PRK07390 295 AIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT---------TITQDL 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 368 VLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGYlnvh 447
Cdd:PRK07390 366 TELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVFLGK---- 441
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 448 fqnfngkknssfysislwgkegkkklkkkihllalltmnnnertsffRKRKysntinrnvksikrlfvestsfgTKNIPf 527
Cdd:PRK07390 442 -----------------------------------------------PQQK-----------------------TRRSP- 450
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 528 fnphESDNTMLFSMLVLVLFTffvgsigisfsqdgidldILSKLLIPSIDLLhqnsknsVDWYEFLTNATFSVSIA-FFG 606
Cdd:PRK07390 451 ----EVLWPMALPMVILAGFT------------------LHLPLLLQQWGLL-------PSWEALNLWAAPLLVASgLLG 501
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 607 ILIASFLYKPVFSSLQNLNVLNFFQKSvtkkiipdkiinLIYDWsynrgYIDAFFEVSLIASVRKLAKFNYFFDRQIIDG 686
Cdd:PRK07390 502 VLLGAWIYLNKAWSRPIQLPLRFLQDL------------LAYDF-----YTDRLYRLTIVFVVALISRLTAWFDRYVVDG 564
|
650
....*....|.
gi 192807063 687 IPNGVGISSFF 697
Cdd:PRK07390 565 LVNLVGLATLF 575
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-439 |
3.43e-73 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 243.13 E-value: 3.43e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 1 PLPVPILIGVGLLLFPTATKnLRRIWAFPSILLLMIVmifSIDLSIHQIQNSSIYQYVWSWTINNDISLEfgylLDSLTS 80
Cdd:COG0651 8 PVLLPLLAAALLLLLGRRRR-LQRALSLLASLALLAL---ALALLLQVLAGGPLVYALGGWPAPFGIVLV----ADRLSA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 81 IMSILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPiAAKA 160
Cdd:COG0651 80 LFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE-ALRA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 161 CQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFnnliynNEVSIFFVTFCAIFLFCGSVAKSAQFPLHVWLPDAM 240
Cdd:COG0651 159 GLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARL------AELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAY 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 241 -EGPTPISALIHAAtMVAAGIFLVARLLPLF---TVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYM 316
Cdd:COG0651 233 pAAPSPVSALLSGL-LTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYI 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 317 MLALGMGSYR---AALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVLMGGLTKHAPITKTAFLIGTLSLCG 393
Cdd:COG0651 312 LLGLGLGTPLglaGALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIGALALAG 382
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 192807063 394 IPPFACFWSKDEILN---DSWLYSPIFAIIACStaGLTAFYMFRIYLLV 439
Cdd:COG0651 383 LPPLSGFVSKWLLLQaalEAGAWLLAAVLLLSS--LLTLAYFVRIFGRA 429
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
59-435 |
1.33e-72 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 246.36 E-value: 1.33e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 59 WSW-TINN-DISLEFgyLLDsltsIMSILITTVGILV----LMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQ 132
Cdd:MTH00066 64 FHWmNIFNfNINSSF--KFD----QYSIIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQ 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 133 VYIFWELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRdlfQIFnnLIYNNEvsiffv 212
Cdd:MTH00066 138 LFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQ---QIF--LLNDNS------ 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 213 TFCAIFLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFTVIPFIMSGIALIGIITVVLGA 292
Cdd:MTH00066 207 TLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 293 TLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVLMGG 372
Cdd:MTH00066 287 ACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGG 358
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 192807063 373 LTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEI---LNDSWL--YSPIFAIIACStagLTAFYMFRI 435
Cdd:MTH00066 359 LQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIieaMNTSNLnsWALILTLIATS---FTAVYSFRI 423
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
46-439 |
2.09e-72 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 249.84 E-value: 2.09e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 46 IHQIQNSSIYQYVWSWTINNDISLEFgyLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLV 125
Cdd:PRK12647 35 IPEIAAGETVRGGYAWVPSLGVNLSF--LLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 126 TSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQiFNNLIYNN 205
Cdd:PRK12647 113 LSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREH 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 206 EvsifFVTFCAIFLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFTVIPFIMSGIALIGI 285
Cdd:PRK12647 192 P----LYLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGG 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 286 ITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSmeaiVGyspd 362
Cdd:PRK12647 268 LTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE----TG---- 339
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 192807063 363 kSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILnDSWLYSPIFAIIACSTAGLTAFYMFRIYLLV 439
Cdd:PRK12647 340 -TRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIY-EALLEAPLWSLILTVAAVLGNALMVAVAFLV 414
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
59-443 |
5.38e-70 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 239.73 E-value: 5.38e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 59 WSW----TINNDISLEFGYLldsltsimSILITTVGILV----------LMYSDNYMShdqgylRFFTYLSFFNTSMLGL 124
Cdd:MTH00137 70 WNWmntlTFDINISFKFDHY--------SIIFTPIALYVtwsilefaswYMHADPNMN------RFFKYLLIFLIAMIIL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 125 VTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILglyWI---TGSLEFRDLFQIFNNl 201
Cdd:MTH00137 136 VTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMA---WMatnLNSWEIQQIFALSKD- 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 202 iynnevsiFFVTFCAIFLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFTVIPFIMSGIA 281
Cdd:MTH00137 212 --------FDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCL 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 282 LIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgysp 361
Cdd:MTH00137 284 CLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSL-------- 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 362 DKSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEI---LNDSWL--YSPIFAIIACStagLTAFYMFRIY 436
Cdd:MTH00137 356 NDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLnaWALTLTLIATS---FTAVYSLRVV 432
|
....*..
gi 192807063 437 LLVFEGY 443
Cdd:MTH00137 433 FFVSMGH 439
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
13-403 |
5.79e-67 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 235.59 E-value: 5.79e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 13 LLFPTATKNLRRI---WafpsILLLMIVMIFSIDLS-IHQIQNSSIYQYVWSWTINNDISleFGYLLDSLTSIMSILITT 88
Cdd:PRK12645 16 LLIPFLYKYFKRIhtgW----FVLPVPVVLFIYFLSlIPTTMSGNTVMKTLPWIPSLGIN--FTLYVDGLSLLFALLITG 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 89 VGILVLMYSDNYMSHDQGYL-RFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKACQKAFVT 167
Cdd:PRK12645 90 IGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLI 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 168 NRVGDFGLLLGILGLYWITGSLEFRDlfqIFNNLIYNNEVSIFfvTFCAIFLFCGSVAKSAQFPLHVWLPDAMEGPTPIS 247
Cdd:PRK12645 170 TVFGGLSMLGGFILLYIMTGSFSIRE---MIANADEIQNSPLF--IPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVS 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 248 ALIHAATMVAAGIFLVARLLPLFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS--- 324
Cdd:PRK12645 245 AYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAasl 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 325 -------------YRAALFHLITHAYSKALLFLGSGSIIHSmeaiVGyspdkSQNMVLMGGLTKHAPITKTAFLIGTLSL 391
Cdd:PRK12645 325 hyqgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHE----TG-----TRDIRKLGGLMTIMPITFTIALIGALSM 395
|
410
....*....|..
gi 192807063 392 CGIPPFACFWSK 403
Cdd:PRK12645 396 AGLPPFNGFLSK 407
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
6-442 |
6.89e-67 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 231.28 E-value: 6.89e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 6 ILIGVGLLLFP--TATKNLRRIWAFPSILLLMIVMIFSIDLS-----IHQIQNSSIYQyvWSWTINNDISLEFGYLLDsl 78
Cdd:MTH00108 8 TLLTLLILTLPiiMTLTNPYKTNNYPLYVKTTISYAFIISLIptmmfIHSGQEMIISN--WHWMTIQTLKLSLSFKLD-- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 79 tsIMSILITTVGILV----LMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTR 154
Cdd:MTH00108 84 --YFSMIFIPVALFVtwsiMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGR 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 155 PIAAKACQKAFVTNRVGDFGLLLGILglyWITGSLEFRDLFQIFnnLIYNNEVsiffvTFCAIFLFCGSVAKSAQFPLHV 234
Cdd:MTH00108 162 TDANTAALQAILYNRIGDIGFILAMA---WFLLNLNSWDLQQIF--MLNPNNS-----NLPLMGLLLAATGKSAQFGLHP 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 235 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLG 314
Cdd:MTH00108 232 WLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 315 YMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVLMGGLTKHAPITKTAFLIGTLSLCGI 394
Cdd:MTH00108 312 LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNL--------NDEQDIRKMGGLFKTLPFTSTALIIGSLALTGM 383
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 192807063 395 PPFACFWSKD---EILNDSwlYSPIFA----IIACStagLTAFYMFRIYLLVFEG 442
Cdd:MTH00108 384 PFLTGFYSKDliiEAANTS--YTNAWAllitLIATS---LTAAYSTRIIFFALLG 433
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
69-442 |
2.25e-65 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 230.89 E-value: 2.25e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 69 LEFGYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLI 148
Cdd:TIGR00940 67 LNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 149 GFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFNNLiynnEVSIFFVtFCAIFLFCGSVAKSA 228
Cdd:TIGR00940 147 SYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAI----RNSPLFG-TAMVLVLLGAFTKSA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 229 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYS 308
Cdd:TIGR00940 222 QFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 309 TMSQLGYMMLALGMGS----------------YRAALFHLITHAYSKALLFLGSGSIIHSmeaivgyspDKSQNMVLMGG 372
Cdd:TIGR00940 302 TISQLGLIMVLLGLGSpsyhyqgddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHE---------TGTRDIRKLGG 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 373 LTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILN-------------DSWLYspIFAIIACSTAGLTAFYMFRIYLLV 439
Cdd:TIGR00940 373 LFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAeaitahlvnpfdtVTLGY--LFPYVATVASVFTFVYSLRFIHGV 450
|
...
gi 192807063 440 FEG 442
Cdd:TIGR00940 451 FFG 453
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
71-440 |
1.90e-63 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 218.69 E-value: 1.90e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 71 FGYLLDSLTSIMSILITTVGILVLMYSDNYMS-------HDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMC 143
Cdd:PRK06525 69 FGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLC 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 144 SYLLIGFWFTrPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFNNLIYNNEVSIFFVTFcaiflfcgs 223
Cdd:PRK06525 149 SWALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAW--------- 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 224 vAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL----PLFTVIPFIMSGIAligIITVVLGATLAIAQK 299
Cdd:PRK06525 219 -GKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIqsmgPIPHVIGYVGAVMA---IVTLLYGFLMYLPQQ 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 300 DIKKNLAYSTMSQLGYMMLALGMGSY------RAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVLMGGL 373
Cdd:PRK06525 295 DMKRLLAYSTITQLGYMFFGLSLAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSC---------GTRLLPRLRGV 365
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 192807063 374 TKHAPITKTAFLIGTLSLCGIPPFACFWSKDEIL-------NDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVF 440
Cdd:PRK06525 366 LKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFaagfelsVEYWILLPAMVLLLIESVASFAWFLRWFGRVVF 439
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
67-404 |
1.49e-61 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 220.09 E-value: 1.49e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 67 ISLEFGYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYL 146
Cdd:PRK12649 70 AGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFM 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 147 LIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFNNLIYNNEVSIFFVTFcaIFLFCGSVAK 226
Cdd:PRK12649 150 LIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITL--ILIFIGAAAK 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 227 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLA 306
Cdd:PRK12649 228 SAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILA 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 307 YSTMSQLGYMMLALGMGSYR-------AALFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNMVLMGGLTKHAPI 379
Cdd:PRK12649 308 YSTISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAH--EA-------ATRDIRKLGGLRKEMPI 378
|
330 340
....*....|....*....|....*
gi 192807063 380 TKTAFLIGTLSLCGIPPFACFWSKD 404
Cdd:PRK12649 379 TFIVASIAALAMAGIPPLNGFLSKE 403
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
67-442 |
1.91e-61 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 221.60 E-value: 1.91e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 67 ISLEFGYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYL 146
Cdd:PRK12648 66 LGLNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 147 LIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIfNNLIYNNevSIFFVTFCAIFLfcGSVAK 226
Cdd:PRK12648 146 LIGYWHHRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVVLAA-GDLIRAH--PLYPPALVLILL--GAFTK 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 227 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPlftvipfIMSG-------IALIGIITVVLGATLAIAQK 299
Cdd:PRK12648 221 SAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWP-------VLAGteewfwiVGGAGLITLLLGAYFALFQH 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 300 DIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNMVLMGGLTKH 376
Cdd:PRK12648 294 DLKGLLAYSTISHLGLITLLLGLGSplaAVAAIFHIINHATFKASLFMAAGIIDH--ET-------GTRDMRRLSGLRRL 364
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 192807063 377 APITKTAFLIGTLSLCGIPPFACFWSK----DEILNDSWLYS-----PIFAIIAcstAGLTAFYMFRIYLLVFEG 442
Cdd:PRK12648 365 MPITATLAMVAAAAMAGVPLLNGFLSKemffAETLDTHLLGSldwllPVAATLA---GAFSVAYSLRFIHDVFFG 436
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
57-434 |
3.08e-60 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 218.64 E-value: 3.08e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 57 YVWSWTinNDISLEFGYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYL-RFFTYLSFFNTSMLGLVTSSNLIQVYI 135
Cdd:PRK12644 56 EVVPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 136 FWELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFqifnnliyNNEVSIFFVTFC 215
Cdd:PRK12644 134 FWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELL--------ADPPTGPAVSVA 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 216 AIFLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFTVIPFIMSGIALIGIITVVLGATLA 295
Cdd:PRK12644 206 VVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRA 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 296 IAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHL---ITHAYSKALLFLGSGSIIHSmeaiVGyspdkSQNMVLMGG 372
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS----TG-----TRDIRKLSG 356
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 192807063 373 LTKHAPITKTAFLIGTLSLCGIPPFACFWSK----DEILNDSWLYSPIFAIIACSTAG--LTAFYMFR 434
Cdd:PRK12644 357 LGRRQPVLAVVAALAAASMAGLPPLLGFVAKeaalEAVLHDGALGPAGPVVLAGIVLGsiLTVAYSLR 424
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
67-404 |
2.19e-57 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 208.46 E-value: 2.19e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 67 ISLEFGYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYL-RFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSY 145
Cdd:PRK12646 68 LDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSF 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 146 LLIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIfNNLIYNNEVSIFFVtfcaIFLFCGSVA 225
Cdd:PRK12646 148 LLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQ-ADHIKNHGLFIPMI----FMFLLGAFT 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 226 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNL 305
Cdd:PRK12646 223 KSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGIL 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 306 AYSTMSQLGYMMLALGMG-----------------SYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMV 368
Cdd:PRK12646 303 AYSTISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHEA---------GTRDIR 373
|
330 340 350
....*....|....*....|....*....|....*.
gi 192807063 369 LMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKD 404
Cdd:PRK12646 374 ILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKE 409
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
32-460 |
7.95e-56 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 200.07 E-value: 7.95e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 32 LLLMIVMIFSIDLSIHQIQNSSIYQYVWSWTINNDISLEFGYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLRFF 111
Cdd:MTH00151 9 FLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFM 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 112 TYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWftrpIAAKACQKAFVT---NRVGD-FGLLLGILGLYWitG 187
Cdd:MTH00151 89 WLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYY----QNKKSLSAGMLTaltNRIGDvLILLSIALLVLL--G 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 188 SLefrdlfqifnNLIYNNEVSIFFvtFCAIFLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 267
Cdd:MTH00151 163 HW----------SILSMWDFKLSG--WLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFF 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 268 PLFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSG 347
Cdd:MTH00151 231 PFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAG 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 348 SIIHSMeaivgyspDKSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILN---DSWLYSPIFAIIACST 424
Cdd:MTH00151 311 SIIHSS--------SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILEsslMSPTSLLMVLLMFVGV 382
|
410 420 430
....*....|....*....|....*....|....*.
gi 192807063 425 aGLTAFYMFRIYLLVFEGYLNVHFqnFNGKKNSSFY 460
Cdd:MTH00151 383 -GLTALYSARLSFCLVWGSMKSSS--LSSKSDEDFY 415
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
31-457 |
8.37e-56 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 199.87 E-value: 8.37e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 31 ILLLMIVMIFSIDLSIHQIQNSSIYQYVWSWTINNDISLEFGYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLRF 110
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 111 FTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPiAAKACQKAFVTNRVGDFGLLLGilglywITGSLE 190
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSK-SLSAGMLTALTNRVGDALLILS------IAWMLM 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 191 FRDLFQIFNNLIYNnevSIFFVTFCAIFlfcGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLF 270
Cdd:MTH00209 159 HGNWNIFYLNFNSN---LGSVISVLIVL---AAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 271 TVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSII 350
Cdd:MTH00209 233 FSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNII 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 351 HSMEaivgyspdKSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILnDSWLYS--PIFAIIACSTA-GL 427
Cdd:MTH00209 313 HSHG--------HSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL-ESMLESnmPIMTLILMFLStSL 383
|
410 420 430
....*....|....*....|....*....|
gi 192807063 428 TAFYMFRIYLLVFEGYLNVHFQNFNGKKNS 457
Cdd:MTH00209 384 TAAYSMRLSYFSLWGPNSSKSLNSSFDQNK 413
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
30-464 |
1.43e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 199.21 E-value: 1.43e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 30 SILLLMIVMIFSIDLSIHQIQNSSIYQYVWSWTINNDISLEFGYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLR 109
Cdd:MTH00165 7 SFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINR 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 110 FFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIgFWFTRPIAAKACQKAFVTNRVGDFGlllgilglywITGSL 189
Cdd:MTH00165 87 FIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVA----------ILLSI 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 190 EFRDLFQIFNNLIYNNEVSI-FFVTFCAIFLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLP 268
Cdd:MTH00165 156 AWMMNFGSWNFIFYLDFMKNsFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNN 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 269 LFtVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGS 348
Cdd:MTH00165 236 LL-FSSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGS 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 349 IIHSMeaivgyspDKSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKD---EILNDSWLYSPIFAIIACSTa 425
Cdd:MTH00165 315 IIHNM--------SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDlilEMVSMSNLNFFIFFLFFFST- 385
|
410 420 430
....*....|....*....|....*....|....*....
gi 192807063 426 GLTAFYMFRIYLLVFEGYLNvHFQNFNGKKNSSFYSISL 464
Cdd:MTH00165 386 GLTVSYSFRLIYYSMSGDFN-LKSLNNLSDESKFMLKSM 423
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-442 |
1.04e-52 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 189.32 E-value: 1.04e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 1 PLPVPI-LIGVGLLLFPTATKNLRRIWAF-PSILLLMIVMIFSIDLSIHQIQNSSIYQYVWSWTInndislefGYLLDSL 78
Cdd:PRK08375 7 PLLVAVpLLAAALIVLLPKRRRLRWALALlVAALTFALAISLLPQVLDGGVIAYVVGGWPPGIGI--------ELRADSL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 79 TSIMSILITTVGILVLMYSDNYMSHDQGylRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPiAA 158
Cdd:PRK08375 79 SALFLLVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR-AL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 159 KACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFNNliyNNEVSIFFVtFCAIFLFcgsvAKSAQFPLHVWLPD 238
Cdd:PRK08375 156 AAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAE---NPTVVTAFG-FVLLALA----LKAAVFPLHTWLPR 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 239 AMEGPTPISALIHAATMVAAGIFLVARLL-----PLFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQL 313
Cdd:PRK08375 228 AYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQM 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 314 GYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNMVLMGGLTKHAPITKTAFLIGTLS 390
Cdd:PRK08375 308 GYILLGLALLTPLalaAGLLHLLHHALMKGALFLAAGAI----EVTYG-----TRRLSELSGLGRRMPLTAAAFAVASLS 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 192807063 391 LCGIPPFACFWSKDEIL---NDSWLYSPIFAIIACSTagLTAFYMFRIYLLVFEG 442
Cdd:PRK08375 379 LIGVPPTSGFVSKWYLVvgaVEAGQWLVLAVLLASSL--LALLYFLRIWYRAFFG 431
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-442 |
2.33e-52 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 189.41 E-value: 2.33e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 3 PVPILIGVGLLLFPTATKNLRRIWAFPSILLLMIVMIFSIDLSIHQIQNSSIYQY-VWSWTINNDISLEfgylLDSLTSI 81
Cdd:PRK12667 11 ILLVLFAFLLPLLSILLKGNRKIQKIYALLVSLITLILSILLFIQVYSSNKPIVYlFGGWPAPIGIVYE----VDLLGAL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 82 MSILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKAC 161
Cdd:PRK12667 87 LGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAA 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 162 QKAFVTNRVGDFGLLLGILGLYWITGSLEFRDL--------FQIFNNLIYNNEVSIFFVTFCAIFLFCGsvaKSAQFPLH 233
Cdd:PRK12667 167 IKYALIGAVGTTLYFLALAFLYATFGTLNMADLsakirglsFPLTGGLAGNPPLALGVALALALWAFTI---KAAIFPNH 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 234 VWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL--------PLFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKN 304
Cdd:PRK12667 244 FWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRL 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 305 LAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVLMGGLTKHAPITK 381
Cdd:PRK12667 323 LAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAGLGRKMPIAS 393
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 192807063 382 TAFLIGTLSLCGIPPFACFWSKdEILNDSWLYS--PIFAIIACSTAGLTAFYMFRIYLLVFEG 442
Cdd:PRK12667 394 FAFLIGALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
4-451 |
5.83e-50 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 181.82 E-value: 5.83e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 4 VPILIGVGLLLFPTATKNLRRIWAFPS---ILLLMIVMIFSIDLSIHQIQnssiYQYVWSWTINNDISLEFGylLDSLTS 80
Cdd:COG1008 12 LPLLGALLLLLLPRRNARLARWVALAVsllTLLLSLYLLAGFDPGTGGFQ----FVESYPWIPSLGISYHLG--VDGISL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 81 IMSILITTVGILVLMYSDNYMSHDQGylRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFW--FTRPIAA 158
Cdd:COG1008 86 PLVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIYAA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 159 KacqKAFVTNRVGDFGLLLGILGLYWITGSLEFrDLFQIfnnliYNNEVSIFFVTFCAIFLFCGSVAKSAQFPLHVWLPD 238
Cdd:COG1008 164 I---KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAEL-----AAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPD 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 239 A-MEGPTPISAlIHAATMVAAGIFLVARL-LPLFtviP----FIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQ 312
Cdd:COG1008 235 AhVEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF---PeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSH 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 313 LGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVLMGGLTKHAPITKTAFLIGTL 389
Cdd:COG1008 311 MGFVLLGIFALnplGLQGAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVLAALFLLAAL 381
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 192807063 390 SLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGYLNVHFQNF 451
Cdd:COG1008 382 ASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAEL 443
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
2-433 |
6.82e-50 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 187.94 E-value: 6.82e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 2 LPVPILIGVGLLLFPTATKNLRRIWAFPSILLLMIVMIFSIDLSIHQIQNSSI-YQYVWSWTI-NNDISLEFGYLLDSLT 79
Cdd:PRK12650 2 LAVLALAALAVVLAPPLVRVLDRKAGWPLAAIFVAAAGLLLKELPPILDGDALtWSVTWIPDLlGNGVDVNLALRADALS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 80 SIMSILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFwfTRPIAAK 159
Cdd:PRK12650 82 LFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR--SGSGGEA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 160 ACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLfqIFNNLIYNNEVsifFVTFCAIFLFCGSVAKSAQFPLHVWLPDA 239
Cdd:PRK12650 160 GSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGI--LHSDVWAEKPG---LTTVVAVLIAVAAFTKSAQFPFHFWLPEA 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 240 MEGPTPISALIHAATMVAAGIFLVARLLPLFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLA 319
Cdd:PRK12650 235 MAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVAT 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 320 LGMGS---YRAALFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPP 396
Cdd:PRK12650 315 IGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDH--QA-------GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPP 385
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 192807063 397 FACFWSKDEILnDSWLYSPIFA---IIACSTAGLTAFYMF 433
Cdd:PRK12650 386 LFGFVSKEGML-TAFLEAPGGNagvVLLLVGAALGAVFTF 424
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
29-439 |
4.00e-49 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 181.50 E-value: 4.00e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 29 PSILLLMIVMIFSIDLSIHQIQNSSIYqyvwswtinndisleFGYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYL 108
Cdd:MTH00207 24 LSLYLMMCNKTILIEWEIFTISSSPIN---------------FTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLS 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 109 RFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIgFWFTRPIAAKACQKAFVTNRVGDFGLLLGI----LGLYW 184
Cdd:MTH00207 89 RFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSIgwtlNQGHW 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 185 ITGSLEFRDlfqiFNNLIynnevsiffvtfcAIFLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVA 264
Cdd:MTH00207 168 SITNMWQTD----MNNYI-------------ALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLI 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 265 RLLPLFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFL 344
Cdd:MTH00207 231 RFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFV 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 345 GSGSIIHSMEaivgyspdKSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILNDSWLY---SPIFAIIA 421
Cdd:MTH00207 311 CAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYphnSLMILMIF 382
|
410
....*....|....*...
gi 192807063 422 CSTaGLTAFYMFRIYLLV 439
Cdd:MTH00207 383 LAT-ALTAAYSTRFTLAV 399
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-442 |
2.28e-47 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 175.29 E-value: 2.28e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 4 VPILIGVGLLLFPTATKNLRRIWAfpsILLLMIVMIFSIDLSIHqIQNSSIYQYVWSWTiNNDISLEFGYL--------- 74
Cdd:PRK08376 13 IPLFGAFSMPIVSLLGGKAREIWA---VLISFLTLIVALLVFYE-VWNNGTIVYVLGAE-SPTLTLPFGSGgfpiriiwe 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 75 LDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTR 154
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 155 PIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEfrdlfqiFNNLIYNNEVSIFFVTFCAIFLFCGSVA-KSAQFPLH 233
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLN-------MAYLAVKMSENPTVVAKIALALFIAGLAmKSGAVPVH 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 234 VWLPDAM-EGPTPISALIHAATmvAAGIFLVARLlpLFTV---------IPFImsgIALIGIITVVLGATLAIAQKDIKK 303
Cdd:PRK08376 241 MWLPDAYpAAPSSISAMLLVIK--QAGLYALARV--LFSIygpainlatVGWV---IIILGCLTMFVGVAMAVVQKDVKR 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 304 NLAYSTMSQLGYMMLALGMG---------------SYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMV 368
Cdd:PRK08376 314 LLAYHSVSQIGYMLLGLGVGlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIYET---------GTRNLN 384
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 192807063 369 LMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEG 442
Cdd:PRK08376 385 ELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
2-435 |
3.74e-39 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 151.04 E-value: 3.74e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 2 LPVPILIGVGLLLF---PTATKNLRRIWAFPSILLLMIVMIFSIdlsihqiqnssiyqyvWSWTINNDISLEFGYLLDSL 78
Cdd:COG1007 8 LPEIILLLGALVLLlldLFLPRRSRRLLAGLALLGLLLALALLL----------------LALGGGTGTAFGGMFVVDGF 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 79 TSIMSILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFNTS-MLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIA 157
Cdd:COG1007 72 ALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRS 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 158 AKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFNNLIYNNevsiFFVTFCAIFLFCGSVAKSAQFPLHVWLP 237
Cdd:COG1007 152 SEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAALAAGGANS----PLLLLGLVLVLAGLAFKLSAVPFHMWTP 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 238 DAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLG 314
Cdd:COG1007 228 DVYEGaPTPVTAFLATAPKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAG 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 315 YMMLALGMGS---YRAALFHLITHAYSKALLFLgsgsIIhsmeAIVGYSPDKSQNMVLMGGLTKHAPITKTAFLIGTLSL 391
Cdd:COG1007 307 YLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VI----LLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSL 378
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 192807063 392 CGIPPFACFWSKDEILNDSW---LYspIFAIIACSTAGLTAFYMFRI 435
Cdd:COG1007 379 AGIPPTAGFFGKFYVFSAAVeagLY--WLAVIAVLNSVISAYYYLRV 423
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
52-403 |
5.75e-38 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 149.76 E-value: 5.75e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 52 SSIYQYVWSWTIN---------NDISLEFGYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFfnTSML 122
Cdd:PRK08668 35 PLLFLIKLYFTLKvgtgekltlFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVL 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 123 GLVTSSNLIQVYIFWELVGMCSYLLIgfWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFNNli 202
Cdd:PRK08668 113 GVFLANDLLTLYIFWEIMTFSSFMMV--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLIN-- 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 203 ynnEVSIFFVTFCAIFLFCGSVAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLLP---------LF 270
Cdd:PRK08668 189 ---DTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtklfsefgTY 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 271 TVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSG 347
Cdd:PRK08668 266 RGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFA 345
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 192807063 348 SIIHSMeaivgyspdKSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSK 403
Cdd:PRK08668 346 AVIYRT---------GTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
75-442 |
7.64e-38 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 150.04 E-value: 7.64e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 75 LDSLTSIMSILITTVGILVLMYSDNYMSHDQGY----LRFFTYLsfFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGF 150
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFREYEGKgpgaMGFFYNL--FLASMVLVLLADDAFSFLVAWETMSLSSWFLVIA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 151 WFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDlfqifnnlIYNNEVSIFFVTFCAIFLFCGSVAKSAQF 230
Cdd:PRK06521 156 NHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAA--------MRAAHLSPFWASLVFLLALFGFGAKAGLV 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 231 PLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFTVIPFIMSGIAL--IGIITVVLGATLAIAQKDIKKNLAY 307
Cdd:PRK06521 228 PLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWWWGVLVlaLGAISAVLGVLYALAEHDLKRLLAY 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 308 STMSQLGYMMLALGMG--------------SYRAALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdkSQNMVLMGGL 373
Cdd:PRK06521 307 STIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATG---------TRDMEKLGGL 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 374 TKHAPITKTAFLIGTLSLCGIPPFACFWSKDEIL--------NDSWLYS---PIFAIIACSTAGLTAFYMFRIYLLVFEG 442
Cdd:PRK06521 378 IRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLqsllsspgLPQWGLKlavPIAAAMLALTAALAAMCFVKFYGITFLG 457
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
11-350 |
1.22e-37 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 147.54 E-value: 1.22e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 11 GLLLFPTATKNLRRIWAFPSILLLMIVMIFSIDLSIHqiqnssiyqyvWSWTINNDISLefgyllDSLTSIMSILITTVG 90
Cdd:PRK08168 20 GLLLSRWLTRALWRIAQAASLAGLFLALLGLVLFATG-----------AAWPAAAWLEV------SGLGLVMAALVQLLG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 91 ILVLMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRV 170
Cdd:PRK08168 83 WVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADRL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 171 GDFGLLLGILGLYWITGSLEFRDLFQIfnnliYNNEVSIFFVTFCAIFLFCGSVAKSAQFPLHVWLPDAMEGPTPISALI 250
Cdd:PRK08168 163 AELLLLAAAALAYLEVGSLSLSALWAH-----LAAQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 251 HAAtMVAAGIFLVARLLPLFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALF 330
Cdd:PRK08168 238 HAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALL 316
|
330 340
....*....|....*....|
gi 192807063 331 HLITHAYSKALLFLGSGSII 350
Cdd:PRK08168 317 HLVAHSLYKAHAFLSASEAV 336
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
73-440 |
1.28e-35 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 140.73 E-value: 1.28e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 73 YLLDSLTSIMSILITTVGILVLMYSDNYMShDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWF 152
Cdd:PRK05777 69 LVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRR 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 153 TRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDlfqIFNNLIYNNEVSIFFVtFCAIFLFCGSVAKSAQFPL 232
Cdd:PRK05777 148 DRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAG---IAKALADGSGNSLLLL-FGLVFLLVGLAFKLSAVPF 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 233 HVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYST 309
Cdd:PRK05777 224 HMWTPDVYEGaPTPVTAFLATAPKIAA-FAVLLRLLvvAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 310 MSQLGYMMLALGMGS---YRAALFHLITHAYSKallfLGSGSIIHSMEAIVGYSPDKSQnmvlMGGLTKHAPITKTAFLI 386
Cdd:PRK05777 303 IAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGEAESISD----FAGLSKRSPLLAAVMTI 374
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 387 GTLSLCGIPPFACFWSKDEIL------NDSWLyspifAIIACSTAGLTAFYMFRIYLLVF 440
Cdd:PRK05777 375 FMLSLAGIPPTAGFWGKFYVFeaaveaGLWWL-----AVIGVLNSAIGAFYYLRVIKLMY 429
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
4-442 |
3.01e-34 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 136.87 E-value: 3.01e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 4 VPILIGVGLLLFPTATKNLRR---IWAFPSILLLMIVMIFSIDLSIHQIQnsSIYQYVWSWTINndISLEFGylLDSLTS 80
Cdd:PRK05846 12 LPLIGGLLVLLTERFGARLARwiaLIGTLLTLLLSLVLWIGFDSSNAGFQ--FVEKHPWIPRFG--ISYHLG--VDGISL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 81 IMSILITTVGILVLMYSDNYMSHDQGylRFFTYLSFFNTSMLGLVTSSNLIQVYIFWE--LVGMcsYLLIGFW--FTRPI 156
Cdd:PRK05846 86 LLVVLTALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEamLIPM--YFLIGVWggKNRIY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 157 AAkacQKAFVTNRVGDFGLLLGILGLYWI----TGSLEFRDLfqifnnliYNNEVSIFFVTFCAIFLFCGSVAKSAQFPL 232
Cdd:PRK05846 162 AA---TKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADL--------LNLPLPPGVQYWLFLAFFIAFAVKMPMFPL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 233 HVWLPDAMEGPTPISALIHAATMVAAGIF-LVARLLPLFTVIPFIMSGIALI-GIITVVLGATLAIAQKDIKKNLAYSTM 310
Cdd:PRK05846 231 HTWLPDAHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDASHEFAPIIITlGVIAIIYGALVALAQTDIKKLIAYSSI 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 311 SQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVLMGGLTKHAPITKTAFLIG 387
Cdd:PRK05846 311 SHMGFVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVLYDRL---------HTRDIADYGGLAKVMPVLAAFFLFF 381
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 192807063 388 TLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEG 442
Cdd:PRK05846 382 AMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFG 436
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-443 |
2.05e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 134.69 E-value: 2.05e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 1 PLPVPILIGVgLLLFPTATKNLRRIWAFPSILLLMIVmifSIDLSIHQIQNSSIYQYVWSWTINNDISLefgyLLDSLTS 80
Cdd:PRK07691 9 PILIPVITAI-LLIFLGKRPIIQRYVALIGSLLTLVA---AIILVANVYKHGIQTLELGNWKAPFGIVF----VADMFAA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 81 IMSILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRpIAAKA 160
Cdd:PRK07691 81 LLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQLRE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 161 CQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFNNLIYNNE--VSIFFVTFCAIFlfcgsVAKSAQFPLHVWLPD 238
Cdd:PRK07691 160 SIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTglITVVAILFLFVF-----ATKAGLFPLYFWLPG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 239 AMEGP-TPISALIhAATMVAAGIFLVARLLPLFTV--IPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGY 315
Cdd:PRK07691 235 SYYAPpIAIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGV 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 316 MMLALGMG---SYRAALFHLITHAYSKALLFLgsgsIIHSMEAIVGYSPDKSqnmvlMGGLTKHAPITKTAFLIGTLSLC 392
Cdd:PRK07691 314 ILVGVAMMtesGMIGAIYYLIHDMIVKAALFL----LIGIMIKITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSLA 384
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 192807063 393 GIPPFACFWSKDEILNDSWLY-SPIFAIIACSTAGLTAFYMFRIYLLVFEGY 443
Cdd:PRK07691 385 GIPPLSGFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWGE 436
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
61-440 |
2.18e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 134.56 E-value: 2.18e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 61 WTINNDISLEFGYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLRFfTYLSFFNTSML---GLVTSSNLIQVYIFW 137
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSS-RFLFFFNLTILigvLIALSSDLFTMFVCY 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 138 ELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRdlfqifnnliynnEVSIF-FVTFCA 216
Cdd:PRK06589 146 ELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFV-------------SGGLFsKNQSII 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 217 IFL-FCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLpLFTVIPFIMSGIA-------LIGIITV 288
Cdd:PRK06589 213 LLLmFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKIL-LYIFGLSYLQRIFaefnwliFIPIVSI 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 289 VLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGM---GSYRAALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQ 365
Cdd:PRK06589 292 FYSSLKALKTDNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKED 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 366 NMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEIL-----NDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVF 440
Cdd:PRK06589 363 QVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKILSSIY 442
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
4-442 |
3.30e-33 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 133.91 E-value: 3.30e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 4 VPILIGVGLLLFPTATKNLRRIWAFPS---ILLLMIVMIFSIDLSIHQiqnssiYQYVWSWTINNDISLEFGYLLDSLTS 80
Cdd:TIGR01972 7 LPLIGALLILLLPSNKDGKARWIALVValaTLLLSLLLLFQFDPTGSG------FQFTEDIPWIPALGISYHLGVDGISL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 81 IMSILITTVGILVLMYSDNYMSHDQGYlrFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWfTRPIAAKA 160
Cdd:TIGR01972 81 LLVLLTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 161 CQKAFVTNRVGDFGLLLGILGLYWITGslefrDLFQIfnNLIYNNEVSIFFVTFCAIFLFCGSVAKSAQFPLHVWLPDAM 240
Cdd:TIGR01972 158 AMKFFLYTLAGSLLMLLAILGLYFLGG-----GTFDL--LELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAH 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 241 -EGPTPISALIHAATMVAAGIFLVARLLPLFTVIPFIMSGIALI-GIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMML 318
Cdd:TIGR01972 231 vEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAAlGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 319 ALGMGSYRA---ALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIP 395
Cdd:TIGR01972 311 GIFSFNELGisgAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLP 381
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 192807063 396 PFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEG 442
Cdd:TIGR01972 382 GTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFG 428
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
67-440 |
5.65e-31 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 127.73 E-value: 5.65e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 67 ISLEFGYLLDSLtsIMSILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYL 146
Cdd:MTH00095 37 LSLKFNFYFNSL--LFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 147 LIGFWFTRPIAAKACQKAFvTNRVGDFGlllgilglywitgslefrdLFQIFNNLIYNN---EVSIFFVTFCAIFLFCGS 223
Cdd:MTH00095 115 LVLFYNNWDSNSGAMNTAL-TNRIGDFF-------------------IFLFFSGFIFSSyyfFSFSFFSSSMILMLLLTS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 224 VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFTVIpFIMSGIALIGIITVVLGATLAIAQKDIKK 303
Cdd:MTH00095 175 FTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEEDMKK 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 304 NLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAivgyspdkSQNMVLMGGLTKHAPITKTA 383
Cdd:MTH00095 254 VVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFG--------QQDGRNYSNNGNLPMFIQLQ 325
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 192807063 384 FLIGTLSLCGIPPFACFWSKDEILNDSWL--YSPIFAIIACSTAGLTAFYMFRIYLLVF 440
Cdd:MTH00095 326 LLVTLFCLCGLMFTSGMVSKELILELFFFnnYMIFFSLMFFFSVFLTFGYSYRLWKSFF 384
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
6-403 |
8.26e-31 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 128.31 E-value: 8.26e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 6 ILIGVGLLLFPTATK---NLRRIWAFPSILLLMI-VMIFSIDLSIHQIQNSSIYQYVWSWTINNDISLEFgyllDSLTSI 81
Cdd:PRK08667 6 FLGAILLLLAAAVIPlvfRHKRKRVWQSVLWLVIaIALLLFAGSLQLFTGNPLDIPLWGIAPGLDITFHI----DRLAAF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 82 MSILITTVGILVLMYSDNYMSHDQGYLR---FFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAA 158
Cdd:PRK08667 82 FIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 159 KACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLfqifnnliynnEVSIFFVTFCAIFLFCGSVAKSAQFPLHVWLPD 238
Cdd:PRK08667 162 RAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPL-----------GASAGILSLVFLLLFLGFGIKAGIIPFHKWLPY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 239 AMEG-PTPISALIHAATMVAAGIFLVARLLPLFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMM 317
Cdd:PRK08667 231 AHPAsPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIIL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 318 LALG--------------MGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVLMGGLTKHAPITKTA 383
Cdd:PRK08667 311 MGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHAT---------GTRNIEKMGGLVKLMPYTSAL 381
|
410 420
....*....|....*....|
gi 192807063 384 FLIGTLSLCGIPPFACFWSK 403
Cdd:PRK08667 382 FLVGAVSIAALPPFNGFASE 401
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
123-407 |
7.37e-29 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 121.03 E-value: 7.37e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 123 GLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPiAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFNNLi 202
Cdd:PRK08377 123 GMIATGDIFNLFVFMEITAITAYALTAYNKTGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGTI- 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 203 yNNEVSIffVTFCAIFLfcGSVAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLPLFTVIPFIMSGIA 281
Cdd:PRK08377 201 -DPTVAQ--VGLALLIF--GLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSVLK 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 282 LI---GIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSMea 355
Cdd:PRK08377 275 LViimATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITL-- 352
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 192807063 356 ivgyspdKSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEIL 407
Cdd:PRK08377 353 -------GGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRII 397
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
74-402 |
8.87e-29 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 120.81 E-value: 8.87e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 74 LLDSLTSIMSILITTVGILVLMYSDNYMSHDQ-------GYLRFftYLSFFNT---SMLGLVTSSNLIQVYIFWELVGMC 143
Cdd:PRK06458 66 FIDDLNVFFLALIGVVGFLTSLYSIGYMRHEVehgelspVTLRL--YYGMYQLflfTMLLALTSNNLGLMWVAIEATTLS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 144 SYLLIGFWFTRPiAAKACQKAFVTNRVGDFGLLLGILGLYW----ITGSLEFRDLFQIFNNLIYNNEVSIFFVTFcaIFL 219
Cdd:PRK06458 144 SALLVGIYRTRA-SLEAAWKYIIICSVGVAFALFGTILVYAnaatVMGDGEMAILWTELLKHASLLDPTLMKLAF--VFL 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 220 FCGSVAKSAQFPLHVWLPDA-MEGPTPISAL------------IHAATMVAAGIFLVARLLPLFTVIpfimsgialiGII 286
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAhSEAPSPVSALlsgvllnvalyaVLRYYILIDAAIGSDFPGRLLLIF----------GLL 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 287 TVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdK 363
Cdd:PRK06458 291 SVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKY---------G 361
|
330 340 350
....*....|....*....|....*....|....*....
gi 192807063 364 SQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWS 402
Cdd:PRK06458 362 TRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFIS 400
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
1-440 |
1.59e-27 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 116.97 E-value: 1.59e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 1 PLPVPILIGVGLLLFptatKNLRRIWAFPSILLLMIVMIFSIDLSIHQIQNSSIYQYVWSWtinndiSLEFG--YLLDSL 78
Cdd:PRK12663 9 PMLLPLLCGLVLVFL----RNRDRLQRYLAIGTLTILTLISLALLIYVQRHGPITLDFGGW------LPPFGiqFTGDSL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 79 TSIMSILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPiAA 158
Cdd:PRK12663 79 SALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQERE-QL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 159 KACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFNNLIYNNEVsiffVTFCAIFLFCGSVaKSAQFPLHvWLPD 238
Cdd:PRK12663 158 RGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATL----TTIALLFLLAFGM-KAALFPFM-WLPA 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 239 AMEGP-TPISALIhAATMVAAGIFLVARLLP-LFTVIPFIMSG-IALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGY 315
Cdd:PRK12663 232 AYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHPlLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGF 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 316 MMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIhsmeAIVGYSPDKSqnmvlMGGLTKHAPITKTAFLIGTLSLC 392
Cdd:PRK12663 311 ILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLV----RLTGYRSLQY-----LGGLYRKEPLFGALFLILIFAIG 381
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 192807063 393 GIPPFACFWSKDEIL-----NDSWlyspIFAIIACSTAGLTAFYMFRIYLLVF 440
Cdd:PRK12663 382 GLPPFSGFWGKVLLVqgaldNGAY----ILLALMLITSLITMYSLFRIFFLAY 430
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
5-443 |
1.95e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 116.20 E-value: 1.95e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 5 PILIGVGLLLFPTATKNLRRIWAFPSILLLMIVMIfsidlsihqiqnsSIYQYVWSWTINNDISLefgyLLDSLTSIMSI 84
Cdd:PRK07234 12 PFLLGFAIYLLPKLDRNLALGMAIVSAVYALGLVA-------------SMVPLELTLLDNFGVTL----RADALSGYFIL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 85 LITTVGILVLMYSdnyMSHDQGYLrFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKACQKA 164
Cdd:PRK07234 75 TNALVTLAVIFYC---WESAKTRF-FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 165 FVTNrVGDFGLLLGILGLYWITGSLEFRDLFQIfnnliynnevsiffVTFCAIFLFCGSVAKSAQFPLHVWLPDAMEGPT 244
Cdd:PRK07234 151 FYSN-VAMLFYLIGAVLVYQANGTFAFSGLATA--------------DPEAFALIALGLLVKGGIFVSGLWLPLTHSEAE 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 245 PISALIHAATMVAAGIFLVARLLPLFTVIPFImsgIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGs 324
Cdd:PRK07234 216 PPVSALLSGVVVKAGVFPLVRCALDVPGLDLI---VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG- 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 325 yraALFHLiTHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMVLMGGLTKHAPITktaflIGTLSLCGIPPFACFWSKD 404
Cdd:PRK07234 292 ---GLYAL-AHGLVKSTLFLCAGAL---------PSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKV 353
|
410 420 430
....*....|....*....|....*....|....*....
gi 192807063 405 EILndsWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGY 443
Cdd:PRK07234 354 LTL---KNLLPWQAIALNLAAVGTAASFWKFIFLPFSAD 389
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
58-459 |
5.85e-27 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 114.66 E-value: 5.85e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 58 VWSWTINNDISLEFGYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFW 137
Cdd:TIGR01770 52 TLQYAAYLFTGFSFFIVDNFALLIKLILLLSTLLTFFFALSYLSKEKINKFEFYILLLFALLGIFLLVSSNDLLSIYLGL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 138 ELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFNNLIYNNevSIFFvtFCAI 217
Cdd:TIGR01770 132 ELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNI--SLLL--LGIV 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 218 FLFCGSVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAA-GIFLVARLLPLFTVIPFIMSGIALIGIITVVLGATLA 295
Cdd:TIGR01770 208 LILVGLLFKLSAVPFHMWVPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGA 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 296 IAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFlgsgSIIHSMEAIVGYSPDksqNMVLMGG 372
Cdd:TIGR01770 288 LAQKKVKRLLAYSSISHVGYILIGLLAGTlegIKAVLFYIFIYALMSLGAF----GVLSLLRSYKDEWIE---YISDFAG 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 373 LTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEIL-----NDSWLYSPIFAIIACstagLTAFYMFRIYLLVFEGYLNVH 447
Cdd:TIGR01770 361 LFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFfallkSGLYWLAVIAVLTSV----IGAFYYLRVVKVMYFDKPERR 436
|
410
....*....|..
gi 192807063 448 FQNFNGKKNSSF 459
Cdd:TIGR01770 437 IPSNPQSKAQSL 448
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
63-372 |
1.60e-23 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 104.73 E-value: 1.60e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 63 INNDISLEFG-YLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLRFFTYLSF--FNTSMLGLvtSSNLIQVYIFWEL 139
Cdd:PRK08601 57 IGANGDVVVGpWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGA 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 140 VGMCSYLLIG---FWFTRPIAAKACQKAFVtnrVGDFGLLLGILGLYWITGSlefrdlFQIFNNLIYNNEVSI--FFVTF 214
Cdd:PRK08601 135 TLLGLTLLIGlnkGWKVAREAAKISGMLFL---ISWLALALAIVWLFIATGE------WQLTSVLSNENLAQLgtWEKTG 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 215 CAIFLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLFTViPFIMSGIALIGIITVVLGATL 294
Cdd:PRK08601 206 INLLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHD-DIAQILLLIFASISVLIGTGI 283
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 192807063 295 AIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEaIVGYSPDKSQNMVLMGG 372
Cdd:PRK08601 284 SLVQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN-IVKQANEKKSYLWIVVG 360
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-435 |
1.91e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 98.27 E-value: 1.91e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 4 VPILIGVGLLLfptaTKNLRRIWAFPSILLLMIVMIFSIDLSihQIQNSSIYQY-VWSWTINNDISLEfgylLDSLTSIM 82
Cdd:PRK12662 12 IPLLSAVVCAL----LKNRKLVKIISCIVVAVSFFIALVLFV--QVYSGGVIKYsLGGWGPPYGIELR----VDILSATM 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 83 SILITTVGILVLMYSdNYMSHDQ----GYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRpiaa 158
Cdd:PRK12662 82 LVLVNFIAVMSVLYG-IYPNRKEisvnKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDK---- 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 159 KACQKAF---VTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFNNLIYNNEVSIffvtfCAIFLFCGSVAKSAQFPLHVW 235
Cdd:PRK12662 157 KALVAAFeylIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQI-----GVLFIMVGLFIKAALFPFHKW 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 236 LPDAM-EGPTPISALIhAATMVAAGIFLVARLLP-------LFTVIPFIMSGIALiGIITVVLGATLAIAQKDIKKNLAY 307
Cdd:PRK12662 232 LIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIVYdvfkanfVFTTLPFNNVFMIL-AALAIVFGSVLAILSKDIKRIFAY 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 308 STMSQLGYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdkSQNMVLMGGLTKHAPITKTAF 384
Cdd:PRK12662 310 SSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFG---------TTKLEDCLNLWKSMPKITLAF 380
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 192807063 385 LIGTLSLCGIPPFACFWSKDEILN---DSWLYSPIFAIIACStaGLTAFYMFRI 435
Cdd:PRK12662 381 VLLSLSLIGMPPTSGFVAKWYILDafiKSNAWIGLVVLLVGS--GLSVIYVWKI 432
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
28-440 |
9.40e-21 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 96.49 E-value: 9.40e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 28 FPSILLLMIVMIFSIDLSihqiqnSSIYQYVWSWTINNDISLEFGYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGY 107
Cdd:MTH00063 2 VLLVSLLLCLLIFFLFLV------GVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYAS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 108 LRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTrPIAAKACQKAFVTNRVGDFGLLLGILGLYWITG 187
Cdd:MTH00063 76 FLLNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGS 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 188 SlefrdlfqifnnliynnevsifFVTFCAIFLFCGSvAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR-- 265
Cdd:MTH00063 155 G----------------------SFLCCLFFFLIVF-TKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRyd 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 266 -LLPLFTVIPFIMsgiaLIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFL 344
Cdd:MTH00063 212 yLLGFSWLSIFFS----VLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFM 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 345 GSGSIihsmeaIVGYSPDKSQNMVLMGGLTKHAPITKTAFLIgtLSLCGIPPFACFWSKDEILND--SWLYSPIFAIIAC 422
Cdd:MTH00063 288 LVGDV------MSGSGGSQSSNCVYSSILYGSWNLFYLFLLV--LGLSGVPFIGVFFSKHFLLSSfsSVVFNVSLLLVVI 359
|
410
....*....|....*...
gi 192807063 423 STAGLTAFYMFRIYLLVF 440
Cdd:MTH00063 360 LCVFLSYLYSFRLCLILF 377
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
73-403 |
1.12e-20 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 96.50 E-value: 1.12e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 73 YLLDSLTSIMSI---LITTVGILVLMYSDNYMSHDQGylrfFTYLSffntSMLGLVTSSNLIQVYIFWELVGMCSYLLIg 149
Cdd:PRK12668 63 GRVDKLSRVFGLifgIMAFIGVIYALHVKDPGQHVAA----LLYVG----SALGAVFAGDLLTLFVFWELMAFTSTFLV- 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 150 fWFTR-PIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFrDLFQIFNNLiynnevsiffvtfCAIFLFCGSVAKSA 228
Cdd:PRK12668 134 -WARGtKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLGGT-------------AAWLILIGFGVNAA 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 229 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFTVIpfimsgiALIGIITVVLGATLAIAQKDIKKNLAYS 308
Cdd:PRK12668 199 FPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELL-------IYIGAAMAVYGVFFALLENDLRRLLSYH 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 309 TMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIHSmeaiVGYSpdksqNMVLMGGLTKHAPITKTAFL 385
Cdd:PRK12668 272 IVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYR----TGTE-----KLTELGGLYRSMPLTALFCL 342
|
330
....*....|....*...
gi 192807063 386 IGTLSLCGIPPFACFWSK 403
Cdd:PRK12668 343 VGALSISAFPLFSGFVSK 360
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
226-440 |
3.29e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 91.57 E-value: 3.29e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 226 KSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLVAR----LLPLFTVIPFIMsgiaLIGIITVVLGATLAIAQKD 300
Cdd:PRK12665 222 KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRthtlLFPGGGLDTLLM----VVALLTMVVGILGAIAQSD 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 301 IKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNMVLMGGLTKHA 377
Cdd:PRK12665 297 IKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVGLI----ERQAG-----SSSLRRLGGLAKAS 367
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 378 PITKTAFLIGTLSLCGIPPFACFWSKDEIL-----NDSWLyspIFAIIACS--TAGLTAFYMFRIYLLVF 440
Cdd:PRK12665 368 PLLAVLFFVPALNLGGIPPFSGFIGKVALLeagaeDGTWL---AWALVAGGvvTSLLTLYAVARVWTKAF 434
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
70-432 |
1.31e-18 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 89.43 E-value: 1.31e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 70 EFGYLLDSLTSIMSILITTVG-ILVLMYSDNYMSH-------DQGYLRFFtYLSFfntSMLGLVT-----SSNLIQVYIF 136
Cdd:PRK08676 55 ESRYLFIDHLGIFVVLIASVVfILAALYARGYVDHllsngelDPENLKVF-YLGF---NLLLSVItfaffSDNLALFWIF 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 137 WELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWI-----TGSLEFRDLfqifnnLIYNNEVSIFF 211
Cdd:PRK08676 131 AELTTVFSAMLIAILSARENIDAALKYIFIASTAMIFAFIGLIFLFSLTrqalgTGTLNWTEL------AAHASLLSPSV 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 212 VTFCAIFLFCGSVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF--TVIPFIMSGIALI-GIIT 287
Cdd:PRK08676 205 LGASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGlGIFS 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 288 VVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGsIIHSMeaivgYSPDKS 364
Cdd:PRK08676 284 IAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ-----YRSDRF 357
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 192807063 365 QNmvlMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILNDS-----WLYSPIFAIIACSTAGLTAFYM 432
Cdd:PRK08676 358 DR---IFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLggisvWLVLAVLLLLLLAASSFAIFLL 427
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
2-437 |
2.63e-18 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 88.62 E-value: 2.63e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 2 LPVPILIGVGLLLFPTATKNLRRIWAFPSILLLM--IVMIFSIDLSIHQIQnssiYQYVWSWtiNNDISLEFGYLLDSLt 79
Cdd:PRK07363 8 LPILGAIIIGFFPGNLPSARLRQITLVFAVLVLAwsLFLLTQFDLSDPGMQ----FQEYLPW--NEPLGLSYSLGVDGL- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 80 SIMSILITTVGILVLMYSDNYMSHDQGYlrFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPiAAK 159
Cdd:PRK07363 81 SLPLLVLNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-RGY 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 160 ACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFNNLIYNNEVSIFfvtfcaIFLFCGSVAKSAQFPLHVWLPDA 239
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILL------TGLLLGFGIKIPLVPLHTWLPDA 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 240 MEGPTPISALIHAATMVAAGIFLVARL-LPLF-TVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMM 317
Cdd:PRK07363 232 YTEASPAVAILLGGVLAKLGTYGLLRFgLQLFpQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYIL 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 318 LALGMG---SYRAALFHLITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNMVLMGGL---TKHAPITKTAFLIGTLSL 391
Cdd:PRK07363 312 VAAAAGtqlSLLGAVAQMISHGLILALLFHLVGIV----ERKVG-----TRDLDVLNGLmnpIRGLPLTSALLVLAGMAS 382
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 192807063 392 CGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYmFRIYL 437
Cdd:PRK07363 383 AGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY-FVILL 427
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
31-450 |
1.14e-17 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 86.68 E-value: 1.14e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 31 ILLLMIVMIFSIDLSIHQIQNSSIYQYVwswtinNDISLEFGYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYlrf 110
Cdd:PRK06473 39 LLLLSLVLAFQFDPGNPNQQFTEFIPWI------DSLGLSYHLGVDGLSLPLLVLNSLLTLIAIYSSDESIQRPRFY--- 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 111 FTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWfTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLE 190
Cdd:PRK06473 110 YSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASS 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 191 FRDLFQIFNNLiynnEVSIFFVTFCAIFLfcGSVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARL-LP 268
Cdd:PRK06473 189 FDYEPLRSHTL----PLSTQLLLLAPILV--GFGIKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRFgVG 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 269 LF-TVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFL 344
Cdd:PRK06473 262 LFpEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQMISHGLISALLFL 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 345 GSGsiihsmeaiVGYSPDKSQNMVLMGGL---TKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIA 421
Cdd:PRK06473 342 LVG---------VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLC 412
|
410 420
....*....|....*....|....*....
gi 192807063 422 CSTAGLTAFYMFRIYLLVFEGYLNVHFQN 450
Cdd:PRK06473 413 MIGTGLTAVYFLLLVNRVFFGRLTAELSN 441
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
31-440 |
4.25e-16 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 81.59 E-value: 4.25e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 31 ILLLMIVMIFSIDLSIHQIQNS------------SIYQYVWSWTINNDISLEFGYLLDSLTSIMSILITTVGILVLMYSD 98
Cdd:CHL00049 21 ILIFGLILLLMIDLTSDQKDIPwlyfisstslvmSITALLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSV 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 99 NYMSHDQGYLRFFtyLSFFNTSMLG---LVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRVGDFGL 175
Cdd:CHL00049 101 EYIECTEMAITEF--LLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSIL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 176 LLGILGLYWIT-GSLEFRdlfQIFNNLIYNNEVSIFFVTFCAIFLFCGSVAKSAQFPLHVWLPDAMEG-PTPISALIhAA 253
Cdd:CHL00049 179 VYGFSWLYGLSgGEIELQ---EIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPVVAFL-SV 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 254 TMVAAGIFLVARLLPLftVIPFIMSG----IALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAAL 329
Cdd:CHL00049 255 TSKVAASALATRIFDI--PFYFSSNEwhllLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGY 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 330 FHLITHAYSKALLFLGSGSIIHSMEAIVGyspdkSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILND 409
Cdd:CHL00049 333 ASMITYMLFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWC 407
|
410 420 430
....*....|....*....|....*....|....
gi 192807063 410 SW---LYSPIFaiIACSTAGLTAFYMFRIYLLVF 440
Cdd:CHL00049 408 GWqagLYFLVS--IGLLTSVISIYYYLKIIKLLM 439
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
226-442 |
1.14e-14 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 76.99 E-value: 1.14e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 226 KSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFLV----------ARLLPLFTVIpfIMSGIALIGIITVVLGATL 294
Cdd:PRK12561 198 KLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLKmggyalirfnVQMLPDAHVY--FAPALAILGVVNIIYGALN 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 295 AIAQKDIKKNLAYSTMSQLGYMMlaLGMGSYRA-----ALFHLITHAYSKALLFLGSGsiihsmeaiVGYSPDKSQNMVL 369
Cdd:PRK12561 269 AFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAMLQMISHGLIAAALFFLTG---------VTYERTHTLSIPN 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 370 MGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEI---LNDSWLYSPIFAIIACSTAG----LTAFYMFRIYLLVFEG 442
Cdd:PRK12561 338 MGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgITSSDVYSSTFRTITILLAAvgliLTPIYLLSMLRRVFYG 417
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
125-442 |
1.33e-14 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 77.17 E-value: 1.33e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 125 VTSSNLIQVYIFWELVGMCSYLLIGfwftrpiAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFNNLIYN 204
Cdd:PRK08042 107 VIASNLGMFVVMAEIMALCAVFLTG-------NSKEGKLWFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLG 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 205 NEvsIFFVTFCAIFLFCGSVaksaqfPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVArLLPLFTVIPFIMSGIALI- 283
Cdd:PRK08042 180 SD--IWLLGVIGFGLLAGII------PLHGWVPQAHANASAPAAALFSTVVMKIGLLGIL-TLSLLGGNAPLWWGVALLv 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 284 -GIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMG--------------SYRAALFHLITHAYSKALLFLGSGS 348
Cdd:PRK08042 251 lGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFLGAGS 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 349 IIHSmeaiVGYspdksQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEI------LNDSWLY-----SPIF 417
Cdd:PRK08042 331 VWFR----TGH-----RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFvarllGPLL 401
|
330 340
....*....|....*....|....*
gi 192807063 418 AIIACSTAGLTAFYMFRIYLLVFEG 442
Cdd:PRK08042 402 AVGLAITGALAVMCMAKVYGVTFLG 426
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
120-422 |
4.77e-14 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 74.30 E-value: 4.77e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 120 SMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRdlfqiFN 199
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLS-----YI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 200 NLIYNNEVSI--FFVTFCAIFLFCGSVAKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLVarLLPLFTVIPFI 276
Cdd:MTH00196 80 NLVLNSGQSFssVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFSI--LVSIGLNVNIL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 277 MSGialiGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSY---RAALFHLITHAYSKALLFLgsgsiihsm 353
Cdd:MTH00196 156 LIG----GLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFesiQASLVYLFIYIIMSICVFS--------- 222
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 192807063 354 eAIVGYSPDKSQnMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIAC 422
Cdd:MTH00196 223 -IILALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLA 289
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
73-403 |
1.43e-13 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 73.53 E-value: 1.43e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 73 YLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLrfftYLSFFNT-SMLGLVTSSNLIQVYIFWELVGMCSYLLIGFW 151
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYV----FLMLMGLaSVSAIVLADDIFNLYVFFEIAAIVQVGLVIAS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 152 FTRPiAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLfqifNNLIYNNEVSIFFVTFCAIFLFcGSVAKSAQFP 231
Cdd:PRK06277 144 GTEE-AYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDI----HNALLVNPTSPVIYGGLLLLIF-GLLYGSGLPP 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 232 LHVWLPDAMEGPTP-ISALIHA---ATMVAAGIFLVaRLLPLFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAY 307
Cdd:PRK06277 218 FHTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAY 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 308 STMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMVLMGGLTKHAPITKTAF 384
Cdd:PRK06277 297 HAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVAFMV 367
|
330
....*....|....*....
gi 192807063 385 LIGTLSLCGIPPFACFWSK 403
Cdd:PRK06277 368 LCAKLAISGVPPFNGFQSK 386
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
52-403 |
1.68e-13 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 73.55 E-value: 1.68e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 52 SSIYQYVWSWTINNDISLEFGYLLDSLTSIMSILITTVGILVLMYSDNYMshDQGYLRFFTYLSFFNTSMLG---LVTSS 128
Cdd:PRK02504 53 AALVALALQWDNPNPISFLGSFNADNLSIAFRAIIALSTLVTLLMSWRYV--EQSGTPLGEFAAILLTATLGgmfLSGAT 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 129 NLIQVYIFWELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEfrDLFQIFNNLIYNnevS 208
Cdd:PRK02504 131 ELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGST--QLSAIALALITS---P 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 209 IFFVTFCAIFLFCGSVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLVARLLplFTVIPFIMSGIALI---- 283
Cdd:PRK02504 206 SLGLALALVFVIAGIAFKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLL--VTAFPSFDEQWKLLftal 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 284 GIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITH------AYSKALLF-LGSGSiihsm 353
Cdd:PRK02504 283 AILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAYlfmnlgAFACVILFsLRTGT----- 357
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 192807063 354 EAIVGYSpdksqnmvlmgGLTKHAPITKTAFLIGTLSLCGIPPFACFWSK 403
Cdd:PRK02504 358 DQISDYA-----------GLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
61-111 |
2.97e-12 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 61.68 E-value: 2.97e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 192807063 61 WTINNDISLEFGYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLRFF 111
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
81-433 |
4.45e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 68.79 E-value: 4.45e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 81 IMSILITTVGILVLMYSDNYMShdQGYLRFFTYLSFFNTSMLGLVtssNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKA 160
Cdd:MTH00226 109 ILTGFIVPCSILISWHSVKYLT--KSFLICMLILEFLLYAVFSVL---DIFMFYILFEGVLIPMYLILGIWGSREEKMQA 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 161 CQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIFNNLIYNNEVSIFFVTFCAIflfcgsVAKSAQFPLHVWLPDA- 239
Cdd:MTH00226 184 AYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSEQTQKWIFLGIFLAM------AVKIPIFPFHIWLPKAh 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 240 MEGPTPISALIHAATMVAAGIFLVARLLPLFTV-IPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMML 318
Cdd:MTH00226 258 VEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSI 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 319 AL---GMGSYRAALFHLITHAYSKALLFLgsgsiihsmEAIVGYSPDKSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIP 395
Cdd:MTH00226 338 TLvthDIIGLTGSIFIMLAHGIVSSLLFI---------LVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVP 408
|
330 340 350
....*....|....*....|....*....|....*...
gi 192807063 396 PFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMF 433
Cdd:MTH00226 409 PSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
30-407 |
7.51e-12 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 68.12 E-value: 7.51e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 30 SILLLMIVMIFSIDLSIHQIqNSSIYQYVWSWTINNDIslefgYLLDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLR 109
Cdd:MTH00199 25 STLKLSIGVLLLIGLIVELN-SLNLFQSDKVLDGTNGL-----LLTNSWIIISKIIIIIGSISILLMGSGETILSEGGQS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 110 FFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSL 189
Cdd:MTH00199 99 SPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGET 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 190 EFRDlfqifNNLIYNNEVSIFFVTFCAIFlfcgsvaKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFlvarllP 268
Cdd:MTH00199 179 SIQG-----INSILTGDVGKILITISLLF-------KLSAAPFHMWAPDVYEGaPTITTALL--ATVPKIGVF------S 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 269 LFTVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSY---RAALFHLITHayskALLFLG 345
Cdd:MTH00199 239 ILVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFesiQASLIYMIIY----VIMSIC 314
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 192807063 346 SGSIIHSMEAIVGYspdksqnMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEIL 407
Cdd:MTH00199 315 SFSIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
225-431 |
1.42e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 64.10 E-value: 1.42e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 225 AKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARL-LPLFTVIPFIMSGIAL-----IGIITVVLGATLAIA 297
Cdd:PRK12666 222 IKAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLsTLLFGPEAGASAGFGQdwllpGGLATLAFGAIGVLA 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 298 QKDIKKNLAYSTMSQLGYMMLALGMGSYR---AALFHLITHAYSKALLFL-----------GSGSIIHSMEAivgYSPDK 363
Cdd:PRK12666 300 AQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrgaAADRLAVTPEL---YDLDE 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 364 SQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILN---------DSWLY------SPIFAIIACSTAGLT 428
Cdd:PRK12666 377 EEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQallnppgagAAWWLwalvllSGLAALIALTRAGIR 456
|
...
gi 192807063 429 AFY 431
Cdd:PRK12666 457 LFW 459
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
60-395 |
6.88e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 62.00 E-value: 6.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 60 SWTINNDISLEFGYLLDSLTSI------MSILITTVGILVLMYSDNYMshdqgYLRFFTYLSFFNTSMLGLVTSSNLIQV 133
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVDGVslffilLTTLLIPICILISWKSIKFL-----FKEFLLCLLFLEVLLIGVFSVLDLLLF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 134 YIFWELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFRDLFQIfnNLIYNNEVSIFfvt 213
Cdd:MTH00204 138 YILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNI--KLPLSIQKWLL--- 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 214 fcaIFLFCGSVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFTVIPFIMSG-IALIGIITVVLG 291
Cdd:MTH00204 213 ---VGFFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPlIVMLSVIAVIYG 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 292 ATLAIAQKDIKKNLAYSTMSQLGYMMLAL---GMGSYRAALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMV 368
Cdd:MTH00204 290 SLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIAVTFL---------YERHHTRLIK 360
|
330 340
....*....|....*....|....*..
gi 192807063 369 LMGGLTKHAPITKTAFLIGTLSLCGIP 395
Cdd:MTH00204 361 YYRGLTLTMPLFVIIMLVLSLANMGFP 387
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
31-343 |
5.31e-09 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 58.98 E-value: 5.31e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 31 ILLLMIVMIFSIDLSIHQIQNSSIYQYVWSWTINNDISLEFGYL-LDSLTSIMSILITTVGILVLMYSDNYMSHDQGYLR 109
Cdd:MTH00014 12 LLLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLsSDMLSAPLITLTLWITALMILASFKIFQNNKAPKT 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 110 FFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKAcqkafvtnrvgdfgllLGILGLYWITGSL 189
Cdd:MTH00014 92 FMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQA----------------SFYLMIYTVTASL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 190 EFrdLFQIFNNLIYNNEV----------SIFFVTFCAIFLFCGSVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAA 258
Cdd:MTH00014 156 PL--LMSILLIFYTNNSLsmlmssmeppSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILA 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 259 GIFL------VARLLPLFTVI-----PFIMSgIALIGIITVVLgatLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS--- 324
Cdd:MTH00014 227 GILLklggygLLRMSSLFMHInkslsAPFSS-ISLVGAVITSL---ICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTswg 302
|
330
....*....|....*....
gi 192807063 325 YRAALFHLITHAYSKALLF 343
Cdd:MTH00014 303 WQGALAMMIAHGLCSSALF 321
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
217-435 |
5.92e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 59.10 E-value: 5.92e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 217 IFLFCGSVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLlplftvipfIMSGIAL-IGIITVVLGATL 294
Cdd:MTH00198 303 LFITVAILFKLAAAPFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTSLV---------ITSKLLLsVAIISLVVGAFG 373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 295 AIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRaALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMVLMGG-- 372
Cdd:MTH00198 374 ALNQTRIKRLLAYSGIGHIGFILIGVSAGTYE-SLQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGSFGNyn 452
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 373 ----------LTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILNDS----WLYS-PIF---AIIACSTAGLTAFYMFR 434
Cdd:MTH00198 453 lvrrlvdltiLSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSikiaFSSSlSIYylvALFAIICTCISAFYYIR 532
|
.
gi 192807063 435 I 435
Cdd:MTH00198 533 I 533
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
208-452 |
1.59e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 56.82 E-value: 1.59e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 208 SIFFVTFCAIFLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFTVIPFIMsgiaLIGIIT 287
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLC----VISVLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 288 VVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNM 367
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 368 VLMGGLtkhapitktafligtLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTA--FYMFRIYLLVFEGYLN 445
Cdd:MTH00144 235 SIISLL---------------LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISlfFYLSVFFSSFLSSSKS 299
|
....*..
gi 192807063 446 VHFQNFN 452
Cdd:MTH00144 300 KKSNSSK 306
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
230-445 |
7.43e-08 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 55.48 E-value: 7.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 230 FPLHVWLPDAMEGPTpisALIHaatMVAAGIFLV----------ARLLP----LFTVIpfimsgIALIGIITVVLGATLA 295
Cdd:PRK02546 230 VPLHTWLPDAHGEAT---APVH---MLLAGILLKmggyallrmnAGMLPdahaQFAPL------LIVLGVVNIIYAALTS 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 296 IAQKDIKKNLAYSTMSQLGYMMlaLGMGSYRA-----ALFHLITHAYSKALLFLgsgsiihsmeaIVGYSPDKSQNMVL- 369
Cdd:PRK02546 298 FAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLFF-----------LVGATYDRTHTLMLd 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 370 -MGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEI---LNDSWLYSPIFAIIACSTAG----LTAFYMFRIYLLVFE 441
Cdd:PRK02546 365 eMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVfvgFATSDAYTLPFRVVVVFLAAvgviLTPIYLLSMLREIFF 444
|
....
gi 192807063 442 GYLN 445
Cdd:PRK02546 445 GPEN 448
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
80-349 |
1.77e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 54.41 E-value: 1.77e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 80 SIMSILITTVGILVLMYSDNYmSHDQGYLRfftylSFFNTSMLGLV---TSSNLIQVYIFWELVGMCSYLLIGfwftrpI 156
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY-DHYGKWLS-----SLYILTILGMAivlTSDNYLLFLAGWEIMTIPSYVAIA------L 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 157 AAKACQKAFVTNRVGDFGLLLG---ILGLYWITGSLEFRDLFQIfnnliynneVSIFFVTFcaiflfcGSVAKSAQFPLH 233
Cdd:PRK06459 115 TKKNKRPAFVFMAFGELSTVLIlagFAWAFIISGTTNFSYLPSP---------VPLILASF-------GFIIKMGMMPFL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 234 V--WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFTVIPFIMSGIAL--IGIITVVLGATLAIAQKDIKKNLAYST 309
Cdd:PRK06459 179 VseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFGLTIlaIGAFSILFGALYAYVSENVKGLLAFST 258
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 192807063 310 MSQLGYMMLALGM--------GSYR-----AALFHLITHAYSKALLFLGSGSI 349
Cdd:PRK06459 259 IENNGAILVALGLymvtkqliTSIEhfsliTVILYSFAHSVAKTGLFLSSGLQ 311
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
6-452 |
9.07e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 51.86 E-value: 9.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 6 ILIGVGLLLFPTATKNLRRIWAFPSILLLMIVMIFSIDLSIHQIQNSSIYQYVWSwtinndislefgylLDSLTSIMSIL 85
Cdd:MTH00206 2 ILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLS--------------YDPLSSPLVIL 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 86 ITTVGILVLMYSDNYMsHDQGYLRFFTYLSFFNTSMLGLV---TSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKACQ 162
Cdd:MTH00206 68 SCWLLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGY 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 163 KAFVTNRVGDFGLLLGILGLYWITGSLEFrdlfqifnNLIYNNEVSIFFVTFCAIFLFCGSVAKSAQFPLHVWLPDA-ME 241
Cdd:MTH00206 147 YFLFYTLIGSLPLLIALLFLQNSLGSLSL--------YILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAhVE 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 242 GPTpisalihAATMVAAGIFL------VARLLPLFTVIPFIMSGIALI-GIITVVLGATLAIAQKDIKKNLAYSTMSQLG 314
Cdd:MTH00206 219 APV-------AGSMVLAGVLLklggygMMRIILILGPSTKLSSYFFIIlGLWGSIMTSSICLRQTDLKSLIAYSSVSHMS 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 315 YMMLALGMG---SYRAALFHLITHAY-SKALLFLGSgsiihsmeaiVGYSPDKSQNMVLMGGLTKHAPITKTAFLIGTLS 390
Cdd:MTH00206 292 LVTAGILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQMILPLLSFWWLLFFLA 361
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 192807063 391 LCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGYLNVHFQNFN 452
Cdd:MTH00206 362 NLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLS 423
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
231-409 |
1.12e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 51.36 E-value: 1.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 231 PLHVWLPDAMEGPTPISALIHAATMVAAGI---FLVARLLPlftviPFIMSgiaLIGIITVVLGATLAIAQKDIKKNLAY 307
Cdd:MTH00112 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLtllLMTSNSLN-----PTLLL---TLAILSTLIGGWGGLNQTQLRKIMAF 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 308 STMSQLGYMMLALGMgSYRAALFHLITHAYSKALLFLgsgsIIHSMEAIvgyspdKSQNMVLMggLTKhAPITKTAFLIG 387
Cdd:MTH00112 182 SSIAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTTSTK------TLKDMMTS--WTK-SPTLNTTLMLT 247
|
170 180
....*....|....*....|..
gi 192807063 388 TLSLCGIPPFACFWSKDEILND 409
Cdd:MTH00112 248 LLSLAGLPPLTGFMPKWLILQE 269
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
230-435 |
1.36e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 51.12 E-value: 1.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 230 FPLHVWLPDAMEGPTPISALIhaatmvaagiFLVARLLPLFTVIPFIMSG-----IALIGIITVVLGATLAIAQKDIKKN 304
Cdd:MTH00200 109 APGHFWVPDVLQGLSLQTGLI----------LSTWQKLAPFALLIQLAPAlnsniLLLLGLLSVLVGGWGGLNQTQLRKI 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 305 LAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLgsgsiihsmeaivgYSPDKSQNMVLMGGLTKHAPITKTAF 384
Cdd:MTH00200 179 LAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL--------------LNLLNSTKINSLSSSKTKNPILSMLL 244
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 192807063 385 LIGTLSLCGIPPFACFWSKDEILNDSWLYS-PIFAIIACSTAGLTAFYMFRI 435
Cdd:MTH00200 245 GLTLLSLGGLPPLTGFFPKWLILQELSKQGlFIYATILLLGSLLSLFFYLRL 296
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
24-318 |
1.44e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 51.32 E-value: 1.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 24 RIWAFPSILLLMIVMIFSIDLsihqIQNSSIYQYVWSWTINNDISlefgYLLDSLTSIMSILITTVGILVLMYSDN---- 99
Cdd:PRK06591 32 RIITRICILSSLLVSIYGYSI----IQNTELSYTMGGWTSKIGIE----YRLNSLNQAIIVYLNLVLLFFLVFCHKitnq 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 100 ----YMSHDQGYLrFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWfTRPIAAKACQKAFVTNRVGDFGL 175
Cdd:PRK06591 104 tilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASG-NNPKSLIGAFDYLIMGSIGATLI 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 176 LLGILGLYWITGSLEFRDLFQIFNNLIYNNevsifFVTFCAIFLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATM 255
Cdd:PRK06591 182 LIAIGFLLSITGSLNMTDIAAYLQEHTNSR-----IITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGIS 256
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 192807063 256 VAAGIFLVARLLPLF----TVIPFIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMML 318
Cdd:PRK06591 257 TIIGIYIIYKFTYIIigyeTIKTAITNFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFL 323
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
233-452 |
3.06e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 46.87 E-value: 3.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 233 HVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFTVI------PFIMsgIALIGIItvvLGATLAIAQKDIKKNLA 306
Cdd:MTH00127 214 HLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLtkelsyPFII--LALWGII---MTGSICLRQTDLKSLIA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 307 YSTMSQLGYM---MLALGMGSYRAALFHLITHAYSKALLFLgsgsiihsmEAIVGYSPDKSQNMVLMGGLTKHAPITKTA 383
Cdd:MTH00127 289 YSSVSHMGLVaggILIQTPWGFTGALILMIAHGLTSSALFC---------LANTNYERTHSRTMLLARGLQMILPLMATW 359
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 192807063 384 FLIGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGYLNVHFQNFN 452
Cdd:MTH00127 360 WFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALN 428
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
226-452 |
4.19e-05 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 46.48 E-value: 4.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 226 KSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFL------VARL-LPLFTVIPFIMS-GIALIGIITVVLGATLAI 296
Cdd:CHL00011 224 KLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLIRInMELLPHAHSIFSpWLVIVGAIQIIYAASTSL 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 297 AQKDIKKNLAYSTMSQLGYMMlaLGMGSY-----RAALFHLITHAYSKALLFLgsgsiihsmeaIVGYSPDKSQNMVL-- 369
Cdd:CHL00011 297 GQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGAILQIISHGFIGAALFF-----------LAGTSYDRIRLVYLde 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 370 MGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEI---LNDSWLYSPIFAIIACSTAG----LTAFYMFRIYLLVFEG 442
Cdd:CHL00011 364 MGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVffgIITSQKYLLMPKILITFVMAigmiLTPIYLLSMLRQMFYG 443
|
250
....*....|
gi 192807063 443 YLNVHFQNFN 452
Cdd:CHL00011 444 YKLFNVPNSY 453
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
209-464 |
7.17e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 45.43 E-value: 7.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 209 IFFVTFCAIFLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFtvipfimSGIALIGIITV 288
Cdd:MTH00197 75 LYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSF-------MGLLICSVLSS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 289 VLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMV 368
Cdd:MTH00197 148 LIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLV 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 369 LmggltkhapitktaFLIGTLSLCGIPPFACFWSKDEILNdSWLYSPIFAIIACSTAGlTAFYMFRIYLLVFEGYLNVHF 448
Cdd:MTH00197 228 F--------------LGLSFLSLGGLPPLSGFFLKWLILT-SLLSSNISLITFMLILS-TCFSLYYYLSLAYKSLILSNW 291
|
250
....*....|....*.
gi 192807063 449 QNFNGKKNSSFYSISL 464
Cdd:MTH00197 292 MINFLMKINLLYSGLF 307
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
81-436 |
8.74e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 45.43 E-value: 8.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 81 IMSILITTVGILVLMYSDNYMSHDqgylrFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAAKA 160
Cdd:MTH00217 87 ILTALLTPICILISWNSIKFLIKE-----FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQA 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 161 CQKAFVTNRVGDFGLLLGILGLYWITGSLEfrdlFQIFNNLIYNNEVSIFfvtfcaIFL--FCGSVAKSAQFPLHVWLPD 238
Cdd:MTH00217 162 SYYFFFYTFIGSVFMLLGIFTLYSYAGTTD----YQALCCLKIEKELQYF------IFLgfFLSLAIKIPKIPFHIWLPQ 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 239 A-MEGPTPISALIHAATMVAAGIFLVARLLPLFTVI-----PFIMSgialIGIITVVLGATLAIAQKDIKKNLAYSTMSQ 312
Cdd:MTH00217 232 AhVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEAseyfsPLIQT----LSLLAIIYGSLTTCRQVDLKRIIAYSSVAH 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 313 LGYMMLAL---GMGSYRAALFHLITHAYSKALLFLGSGSII--HSMEAIVGYSpdksqnmvlmgGLTKHAPITKTAFLIG 387
Cdd:MTH00217 308 MGLVTLGIfshTIQGLVAAIFLMLAHGLVSSALFIAVTFLYerHHTRLIKYYR-----------GMVITMPLFGILMLLL 376
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 192807063 388 TLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIY 436
Cdd:MTH00217 377 VLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
232-447 |
1.11e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 45.29 E-value: 1.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 232 LHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFT------VIPFIMsgIALIGIItvvLGATLAIAQ 298
Cdd:MTH00068 212 LHLWLPKAhVEAPI-------AGSMILAAVLLklggygILRISILLTplskelSYPFII--LALWGVL---MTSLICLRQ 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 299 KDIKKNLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAY-SKALLFLgsgsiihsmeAIVGYSPDKSQNMVLMGGLT 374
Cdd:MTH00068 280 TDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCL----------ANTNYERTHSRTLLLLRGAQ 349
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 192807063 375 KHAPITKTAFLIGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGYLNVH 447
Cdd:MTH00068 350 TILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNH 422
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
207-420 |
2.73e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 43.95 E-value: 2.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 207 VSIFFVTFCAIFLFCGSVAKSAQFPLHVWLPDAMEgptpiSALIHAATMVAAGIFLVArllplFTVIPFIMSG---IALI 283
Cdd:PRK12664 138 QNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYP-----AASNFGIIVLSLFTTKVA-----ALVLLLFFSGeeiLLFL 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 284 GIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS-----YRAALFHLITHAYSKALLFLGSGSIIHSMEAIvg 358
Cdd:PRK12664 208 GIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVINRTRKF-- 285
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 192807063 359 yspdksqNMVLMGGLTKhAPITKTAFLIGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAII 420
Cdd:PRK12664 286 -------NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLY 339
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
194-465 |
5.08e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 42.89 E-value: 5.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 194 LFQIFNNLIYNNEVSIFFVTFCAIFLFcgsvAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvarlLPLFTVI 273
Cdd:MTH00160 72 LFSIILNMLNLMLFNNISSMLINSSLL----LKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLIL----LSYLINN 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 274 PFIMsgiaLIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLIthaYSKALLFLgsgsiihsm 353
Cdd:MTH00160 144 NFII----IIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLI---YSIISLSI--------- 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 354 eaIVGYSPDKSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILN---DSWLYSPIFAIIACSTagLTAF 430
Cdd:MTH00160 208 --ILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQlliSNNMFFLLFILIMSSL--ITLY 283
|
250 260 270
....*....|....*....|....*....|....*
gi 192807063 431 YMFRIYLLVFEGYLNVHFQNFNGKKNSSFYSISLW 465
Cdd:MTH00160 284 FYLRISYSSLMLNYNKNKWNLKKKKNKFSLILNFL 318
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
214-452 |
1.58e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 41.30 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 214 FCAIFLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVaagiflVARLLPLFTVIPF-IMSGIALIGIITVVLGA 292
Cdd:MTH00011 89 ITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQK------IAPLSILFFFTSHnILPMMTSMAAMSALAGG 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 293 TLAIAQKDIKKNLAYSTMSQLGYMMLAlgmgsyraalfhlITHAYSKALLFLGSGSIIHS-MEAIVGYSPDKSQNMvlMG 371
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMI-------------SVFSPSMAILYFMTYIIITTpLMLLFAYLNAFSTKF--NS 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 372 GLTKHAPITKTAFLIGTLSLCGIPPFACF---WSKDEILNDSWLYSPIFAIIACSTAGLtaFYMFRIYLLVFegYLNVHF 448
Cdd:MTH00011 228 KISSMSQTTSMSLFIMLLSLGGLPPFTGFmpkLMAIETLTSNSMILILLVLIVGSLMNL--FYYLNLIFNFM--YLSPTF 303
|
....
gi 192807063 449 QNFN 452
Cdd:MTH00011 304 SSLK 307
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
194-419 |
1.74e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 41.07 E-value: 1.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 194 LFQIFNN-----LIYNNEVSIFFVTFCAIFlfcgsvaKSAQFPLHVWLPDAMEGPTPISALIhaatmvAAGIFLVARLLP 268
Cdd:MTH00041 75 LIQAWLSgswsiNGPLNTLSSIIITLALAL-------KLGLAPCHFWFPDVLQGLPFLQGLI------IATWQKIAPLIL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 269 LFTVIPFIMSGI-ALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSG 347
Cdd:MTH00041 142 LISISNLLNSNIlILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNN 221
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 192807063 348 SIIHSMEAIvgyspdksqnmvlmGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSK-----DEILNDSWLYSPIFAI 419
Cdd:MTH00041 222 FSLSTLSHL--------------NKLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCLIQNNSILISIILII 284
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
55-461 |
5.09e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 39.82 E-value: 5.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 55 YQYVWSWtinndISLEFGYLLDSLTSIM---SILITTVGILVLMYSDNYMSHDQGYLRFFTYLSFFntsmlgLVT---SS 128
Cdd:MTH00150 7 YSSFSSY-----ESLSELFSVDSMSSLLislSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLI------LVLafsVS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 129 NLIQVYIFWELVGMCSYLLIGFWFTRPIAAKACQKAFVTNRVGDFGLLLGILGLYWITGSLEFrdlfqIFNNLIYNNEVS 208
Cdd:MTH00150 76 SLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM-----LLISSLRKLLSS 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 209 IFFVTFCAIFLFcgsVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFTVIPFIMSGIA 281
Cdd:MTH00150 151 MGLWGLLVFLAF---LVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSLSSSSFSIFL 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 282 L-IGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFlgsgsiihsmeAIV 357
Cdd:MTH00150 221 IsLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFCSSGLF-----------CLA 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807063 358 GYSPDKSQ--NMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRI 435
Cdd:MTH00150 290 NYTYEKVHsrSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYL 369
|
410 420
....*....|....*....|....*.
gi 192807063 436 YLLVFEGYLNVHFQNFNGKKNSSFYS 461
Cdd:MTH00150 370 YTSIQHGGSSSFLKPFNELKSSEMLL 395
|
|
| |
