|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-694 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1349.55 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 1 PLPVPILIGVGLLLFPTATKNLRRMWAFPSILLLTIVMIFSIDLSIHQIKNSSIYQYVWSWTINNDLSLEFGYFIDSLTS 80
Cdd:CHL00025 15 PLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINNDFSLEFGYLIDPLTS 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 81 IMSILITTVGILVLIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANA 160
Cdd:CHL00025 95 IMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANA 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 161 CQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIFNHLIYKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAM 240
Cdd:CHL00025 175 CQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAM 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 241 EGPTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLAL 320
Cdd:CHL00025 255 EGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLAL 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 321 GMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPERSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACF 400
Cdd:CHL00025 335 GIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACF 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 401 WSKDEILDDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGYFNVHFQNFNGKKNSSFYSISLWGkegKKKLKKKIHLL 480
Cdd:CHL00025 415 WSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWG---KEESKKINKLL 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 481 ALLTMNNNERTSFFRKRTY-SNRNVKSITRLFldSTHFGNKNIpFFYPHESDNTMLFSMLILVLFTFFIGSIGISFSQEG 559
Cdd:CHL00025 492 LLLTMNNNERVSFFSKKTYkIDGNVRNMIRSF--ITIFGNKKT-FSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEG 568
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 560 IGLDILSKLLIPSIDLLHQNSKNSVDWYEFFTNATFSVSIAFFGILIASFFYQPVFSSLQNLNFLNFFQKSVPKKMIAEK 639
Cdd:CHL00025 569 IDLDILSKWLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINSFVKGGPKRIFLDK 648
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 192807049 640 IINVIYDWSYHRGYIDAFLEVSLIASVRKLAKFNYFFDRQVIDGIPNGVGISSFF 694
Cdd:CHL00025 649 IINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITSFF 703
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-690 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 653.63 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 1 PLPVPILIGVGLLLFPTATKNLRRMWAFPSILLLTIVMIFSIDLSIHQIKNSSIYQYVWSWTINNDLSLEFGYFIDSLTS 80
Cdd:PRK07376 15 PLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGDFHLPMGYVIDPLGA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 81 IMSILITTVGILVLIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANA 160
Cdd:PRK07376 95 VMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADA 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 161 CQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIFNHLIYKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAM 240
Cdd:PRK07376 175 AQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDAM 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 241 EGPTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLAL 320
Cdd:PRK07376 255 EGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAM 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 321 GMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPERSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACF 400
Cdd:PRK07376 335 GCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGF 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 401 WSKDEILDDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGyfnvhfqNFNGkknssfysislwgkegkkklkkkihll 480
Cdd:PRK07376 415 WSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEG-------EFRG--------------------------- 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 481 alltmNNNE-RTSFFRKRTYSNRNVKSITRLFLDSTHFGNknipffyPHESDNTMLFSMLILVLFTFFIGSIGISFSqeg 559
Cdd:PRK07376 461 -----NDKElQKELLAAADAPGHHEGHHEEHGEHHHHSGS-------PHESPWTMTLPLVVLAVPSVLIGLLGTPWN--- 525
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 560 iglDILSKLLIPSIDLLHQnsKNSVDWYEFFTNATFSVSIAFFGILIASFFYqpvfsslqnlnflnfFQKSVPKKMIAEK 639
Cdd:PRK07376 526 ---NRFEAFLHAPGEALEA--AAHFEWGEFLILAGASVGIALIGITLASLMY---------------LLKKIDPAAIAER 585
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|.
gi 192807049 640 iINVIYDWSYHRGYIDAFLEVSLIASVRKLAKFNYFFDRQVIDGIPNGVGI 690
Cdd:PRK07376 586 -FPPLYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTGL 635
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
4-689 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 530.88 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 4 VPILIGVGLLLFPTATKNLRRMWAF-PSILLLTIVMIFSIdLSIHQIKNSSIYQYVWSWTINNDLSLEFGYFIDSLTSIM 82
Cdd:COG1009 7 IPLLPLLGALLAGLLGRRLGRRAAGwLAALAPLAAFVLSL-LLFPAVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLM 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 83 SILITTVGILVLIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQ 162
Cdd:COG1009 86 LLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAAR 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 163 KAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIFNHLIyknevNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEG 242
Cdd:COG1009 166 KAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIL-----SSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 243 PTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGM 322
Cdd:COG1009 241 PTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 323 GSYRAALFHLITHAYSKALLFLGSGSIIHSMEaivgysperSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWS 402
Cdd:COG1009 321 GAYVAALFHLLTHAFFKALLFLGAGSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFS 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 403 KDEILDDSW---LYSPIFAIIACSTAGLTAFYMFRIYLLVFEGyfnvhfqnfngkknssfysislwgkegkkklkkkihl 479
Cdd:COG1009 392 KEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVFFG------------------------------------- 434
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 480 lalltmnnNERTSFFRKrtysnrnvksitrlfldsthfgnknipffyPHESDNTMLFSMLILVLFTFFIGSIGISFSQEG 559
Cdd:COG1009 435 --------KPRPKTPKH------------------------------PHESPWLMTLPLVVLAVLSLVLGLLLPGLLEGL 476
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 560 IGLDilsKLLIPSIDLLHQnsknsvdwyEFFTNATFSVSIAffGILIASFFYqpvfsslqnlnflnfFQKSVPKkmiAEK 639
Cdd:COG1009 477 LAPA---AVLGGELHLAHG---------LLLNALPLLLSLL--GIALGYLLY---------------LKRPLPA---LAE 524
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|
gi 192807049 640 IINVIYDWSYHRGYIDAFLEVSLIASVRKLAKFNyFFDRQVIDGIPNGVG 689
Cdd:COG1009 525 RLKPLYRLLANKWYFDELYDALFVKPVRALARFL-WFDRYVIDGIVNGLA 573
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
33-689 |
5.61e-177 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 518.56 E-value: 5.61e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 33 LLTIVMIFSIDLSIHQiknsSIYQYVWSWTINNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYLRFFT 112
Cdd:PRK06590 44 LLSLVVFFDFLLGGGR----AFSQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFA 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 113 YLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFR 192
Cdd:PRK06590 120 YLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYD 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 193 DlfqIFNHLIYKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIA 272
Cdd:PRK06590 200 E---VFAAAPQFFGLGWSALTLICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFEL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 273 IPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHS 352
Cdd:PRK06590 277 SPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHA 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 353 MeaivgyspERSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILDDSWLYSPIFA-IIACSTAGLTAFY 431
Cdd:PRK06590 357 M--------HHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANGHINLfVAGLVGAFLTAFY 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 432 MFRIYLLVFegyfnvhfqnfngkknssfysislwgkegkkklkkkihllalltmnnnertsffrkrtysnrnvksitrlf 511
Cdd:PRK06590 429 SFRLIFLVF----------------------------------------------------------------------- 437
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 512 ldsthFGNKNIPFFYPHESDNTMLFSMLILVLFTFFIGSIGISFsqegigldiLSKLLIPSIDLLHQNSKNSVdwyeFFT 591
Cdd:PRK06590 438 -----HGKEKEKIHHPHESPAVMTLPLIVLAVLSVFAGALIVPP---------FLGVLPLTTELAHGEAEHHL----PVW 499
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 592 NATFSVSIAFFGILIASFFYQpvfsslqnlnflnfFQKSVPKKMiaEKIINVIYDWSYHRGYIDAFLEVSLIASVRKLAK 671
Cdd:PRK06590 500 VALLPLVVALAGIALAWLLYL--------------KKPTLPTSI--AAPGRFLYTLLRNKYYFDELYEKVFVKPGLALAR 563
|
650
....*....|....*....
gi 192807049 672 F-NYFFDRQVIDGIPNGVG 689
Cdd:PRK06590 564 LlWKDGDDGIIDGLVPNSA 582
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
30-442 |
2.00e-147 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 442.11 E-value: 2.00e-147
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 30 SILLLTIVMIFSIDLSIHQIKNSSIYQYVWSWTINNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYLR 109
Cdd:TIGR01974 36 SVGLSAALSAFVFVDFFLNGEGEAFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 110 FFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSL 189
Cdd:TIGR01974 116 FFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 190 EFRDLFQIFNHLIYKnevnlfFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 269
Cdd:TIGR01974 196 NFQEVFALAPGAFFS------ALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPL 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 270 FIAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSI 349
Cdd:TIGR01974 270 FELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSV 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 350 IHSMeaivgyspERSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILDDSW--LYSPIFAIIACSTAGL 427
Cdd:TIGR01974 350 IHAM--------HHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIGAFL 421
|
410
....*....|....*
gi 192807049 428 TAFYMFRIYLLVFEG 442
Cdd:TIGR01974 422 TAFYSFRLIFMVFHG 436
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
434-677 |
1.50e-127 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 377.72 E-value: 1.50e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 434 RIYLLVFEGYFNVHFQNFNGKKNSSFYSISLWGKEGKKKLKKKIHLLALLTMNNNERTSFFRKRTY-SNRNVKSITRLFL 512
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTLLLLTMNNNEKVSFFSKKTYrIDGNVRNMTRPFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 513 DSTHFGNKNIpFFYPHESDNTMLFSMLILVLFTFFIGSIGISFSQEGIGLDILSKLLIPSIDLLHQNSKNSVDWYEFFTN 592
Cdd:pfam01010 81 TITHFDNKKT-FSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNSNNSVDWYEFVTN 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 593 ATFSVSIAFFGILIASFFYQPVFSSLQNLNFLNFFQKSVPKKMIAEKIINVIYDWSYHRGYIDAFLEVSLIASVRKLAKF 672
Cdd:pfam01010 160 AIFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLAEL 239
|
....*
gi 192807049 673 NYFFD 677
Cdd:pfam01010 240 THFFD 244
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
52-460 |
9.32e-109 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 342.37 E-value: 9.32e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 52 SSIYQYVWSWTINNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLI 131
Cdd:MTH00210 55 SATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYV 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 132 QVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIFNHLIYKNEVnlff 211
Cdd:MTH00210 135 QLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESL---- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 212 vTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMSGIALIGIITVVLG 291
Cdd:MTH00210 211 -TIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFA 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 292 ATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgySPErsQNMVLMG 371
Cdd:MTH00210 290 ATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV------SDE--QDMRKMG 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 372 GLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILDDSW-LYSPIFAI-IACSTAGLTAFYMFRIYLLVFEGYFNVHFQ 449
Cdd:MTH00210 362 GLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdKYYIAFAYwLGSFSALLTAFYSIRLIYLTFITNTNSKKE 441
|
410
....*....|.
gi 192807049 450 NFNGKKNSSFY 460
Cdd:MTH00210 442 VFIGVHESSWN 452
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
33-459 |
2.85e-107 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 338.59 E-value: 2.85e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 33 LLTIVMIFSIDLSIHQIKNSS-IYQYVWSWTINNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYLRFF 111
Cdd:MTH00020 35 CLIISLSWSFLIFYEILFNSStTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFM 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 112 TYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEF 191
Cdd:MTH00020 115 SYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDF 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 192 RDlfqIFNHLIYKNEVNLFFVtlcALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFI 271
Cdd:MTH00020 195 SS---VFNMVVSAPSSDITLI---CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFE 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 272 AIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIH 351
Cdd:MTH00020 269 QAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIH 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 352 SMeaivgyspERSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILDDSWL-YSPIFAI-IACSTAGLTA 429
Cdd:MTH00020 349 AL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGqYYLIFAYwLGCFSALLTA 420
|
410 420 430
....*....|....*....|....*....|
gi 192807049 430 FYMFRIYLLVFEGYFNVHFQNFNGKKNSSF 459
Cdd:MTH00020 421 FYSIRLIYLTFLSNTNLKKAVFFHLHEGDW 450
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
59-446 |
7.87e-86 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 281.84 E-value: 7.87e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 59 WSWTINNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWE 138
Cdd:MTH00211 61 WSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 139 LVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFqifnhliykneVNLFFVTLCALL 218
Cdd:MTH00211 141 GVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLF-----------ILNLDLTLFLLG 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 219 LFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMSGIALIGIITVVLGATLAIAQ 298
Cdd:MTH00211 210 LLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQ 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 299 KDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIvgyspersQNMVLMGGLTKHAP 378
Cdd:MTH00211 290 NDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNE--------QDIRKMGGLSKNLP 361
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 192807049 379 ITKTAFLIGTLSLCGIPPFACFWSKDEILDD---SWLYSPIFAIIACSTaGLTAFYMFRIYLLVFEGYFNV 446
Cdd:MTH00211 362 FTSSCLFLGSLALMGFPFLSGFFSKDLILESmngSYLNAWALLLTLLAT-SLTAAYSFRLIFLSLGGYPRF 431
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
49-408 |
8.34e-83 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 275.68 E-value: 8.34e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 49 IKNSSIYQYVWSWTINNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLVTSS 128
Cdd:MTH00032 52 INDAVVHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 129 NLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEF---------RDLFQIFN 199
Cdd:MTH00032 132 NYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFltfnggsvgSGIMDRGY 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 200 HLIYKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMSG 279
Cdd:MTH00032 212 YGGGAYESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLI 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 280 IALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGM-GSYRAALFHLITHAYSKALLFLGSGSIIHSMEAivg 358
Cdd:MTH00032 292 ITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV--- 368
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 192807049 359 yspeRSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILD 408
Cdd:MTH00032 369 ----DEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
32-694 |
7.52e-80 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 266.01 E-value: 7.52e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 32 LLLTIVMIFSIDLSIHQIKNSSIYQYVWSWTINNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYLRFF 111
Cdd:PRK07390 44 LLMTLLAFVHSLLALRAIWNQPPQQLSFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 112 TYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEF 191
Cdd:PRK07390 124 ALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNF 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 192 RDLFQIFNhliyKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFI 271
Cdd:PRK07390 204 SDLAAWAA----TANLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLA 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 272 AIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIH 351
Cdd:PRK07390 279 LSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIIL 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 352 SmeaivgyspERSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILDDSWLYSPIFAIIACSTAGLTAFY 431
Cdd:PRK07390 359 T---------TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFN 429
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 432 MFRIYLLVFEGyfnvhfqnfngkknssfysislwgkegkkklkkkihllalltmnnnertsffrkrtysnrNVKSITRlf 511
Cdd:PRK07390 430 LTRVFRLVFLG------------------------------------------------------------KPQQKTR-- 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 512 ldsthfgnkNIPffyphESDNTMLFSMLILVLFTffigsigisfsqegigldILSKLLIPSIDLLhqnsknsVDWYEFFT 591
Cdd:PRK07390 448 ---------RSP-----EVLWPMALPMVILAGFT------------------LHLPLLLQQWGLL-------PSWEALNL 488
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 592 NATFSVSIA-FFGILIASFFYQPVFSSLQNLNFLNFFQksvpkkmiaekiinviyDWSYHRGYIDAFLEVSLIASVRKLA 670
Cdd:PRK07390 489 WAAPLLVASgLLGVLLGAWIYLNKAWSRPIQLPLRFLQ-----------------DLLAYDFYTDRLYRLTIVFVVALIS 551
|
650 660
....*....|....*....|....
gi 192807049 671 KFNYFFDRQVIDGIPNGVGISSFF 694
Cdd:PRK07390 552 RLTAWFDRYVVDGLVNLVGLATLF 575
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
127-426 |
1.39e-79 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 255.32 E-value: 1.39e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 127 SSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIFNHLIYKNE 206
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 207 VNlffvtLCALLLFCGSVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF-IAIPSIMSGIALIG 284
Cdd:pfam00361 81 LL-----LLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 285 IITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgysp 361
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRR-------- 226
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 192807049 362 ERSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILDDSWLYSPIFAIIACSTAG 426
Cdd:pfam00361 227 VHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
100-443 |
2.83e-78 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 261.64 E-value: 2.83e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 100 YMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLllgI 179
Cdd:MTH00004 107 YMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGL---I 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 180 LGIYWITGSLEFRDLFQIFNHliykNEVNlffvTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAG 259
Cdd:MTH00004 184 LSMAWLAMTLNTWEIQQLFSP----TQTP----TLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAG 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 260 IFLVARLLPLFIAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSK 339
Cdd:MTH00004 256 IFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFK 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 340 ALLFLGSGSIIHSMeaivgyspERSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKD---EILDDSWLYSPI 416
Cdd:MTH00004 336 AMLFLCSGSIIHNL--------NNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDtiiETLNTSYLNAWA 407
|
330 340
....*....|....*....|....*..
gi 192807049 417 FAIIACSTAgLTAFYMFRIYLLVFEGY 443
Cdd:MTH00004 408 LLLTLLATS-FTAAYSLRMILLVQTGF 433
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-439 |
3.62e-76 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 250.83 E-value: 3.62e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 1 PLPVPILIGVGLLLFPtatKNLRRMWAFpSILLLTIVMIFSIDLSIHQIKNSSIYQYVWSWTinndLSLEFGYFIDSLTS 80
Cdd:COG0651 8 PVLLPLLAAALLLLLG---RRRRLQRAL-SLLASLALLALALALLLQVLAGGPLVYALGGWP----APFGIVLVADRLSA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 81 IMSILITTVGILVLIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPiAANA 160
Cdd:COG0651 80 LFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE-ALRA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 161 CQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIFNHLiyknevNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAM 240
Cdd:COG0651 159 GLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAEL------DPGLLLAAFALLLVGFGIKAALFPLHFWLPDAY 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 241 -EGPTPISALIHAAtMVAAGIFLVARLLPLFIAIPSIMSG---IALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYM 316
Cdd:COG0651 233 pAAPSPVSALLSGL-LTKVGVYAILRVLTLLFGADPALFLgtlLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYI 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 317 MLALGMGSYR---AALFHLITHAYSKALLFLGSGSIIHSMeaivgyspeRSQNMVLMGGLTKHAPITKTAFLIGTLSLCG 393
Cdd:COG0651 312 LLGLGLGTPLglaGALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIGALALAG 382
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 192807049 394 IPPFACFWSKDEILD---DSWLYSPIFAIIACStaGLTAFYMFRIYLLV 439
Cdd:COG0651 383 LPPLSGFVSKWLLLQaalEAGAWLLAAVLLLSS--LLTLAYFVRIFGRA 429
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
59-435 |
3.67e-76 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 255.99 E-value: 3.67e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 59 WSW-TINN---DLSLEFGYFidsltsimSILITTVGILV----LIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNL 130
Cdd:MTH00066 64 FHWmNIFNfniNSSFKFDQY--------SIIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 131 IQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRdlfQIFnhLIYKNEvnlf 210
Cdd:MTH00066 136 FQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQ---QIF--LLNDNS---- 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 211 fvTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMSGIALIGIITVVL 290
Cdd:MTH00066 207 --TLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLF 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 291 GATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspERSQNMVLM 370
Cdd:MTH00066 285 TAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKM 356
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 192807049 371 GGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILD-------DSWlySPIFAIIACStagLTAFYMFRI 435
Cdd:MTH00066 357 GGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEamntsnlNSW--ALILTLIATS---FTAVYSFRI 423
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
46-439 |
1.13e-75 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 258.31 E-value: 1.13e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 46 IHQIKNSSIYQYVWSWTinNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLV 125
Cdd:PRK12647 35 IPEIAAGETVRGGYAWV--PSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 126 TSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQiFNHLIYKN 205
Cdd:PRK12647 113 LSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREH 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 206 EvnlfFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMSGIALIGI 285
Cdd:PRK12647 192 P----LYLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGG 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 286 ITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSmeaiVGyspe 362
Cdd:PRK12647 268 LTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE----TG---- 339
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 192807049 363 rSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILdDSWLYSPIFAIIACSTAGLTAFYMFRIYLLV 439
Cdd:PRK12647 340 -TRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIY-EALLEAPLWSLILTVAAVLGNALMVAVAFLV 414
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
30-440 |
3.29e-74 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 251.43 E-value: 3.29e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 30 SILLLTIVMIFSIDLSIHQIKNS--SIYQYVWSWTINNDLSLEFGYFIDSLtsimSILITTVGILV----LIYSDHYMSH 103
Cdd:MTH00208 58 SISLLKTLAFLSLINLLIWILLGcpNINISLSNWLSNTLFNFSLSFIFDFY----FILFFSVALFVtwsiIEFSHYYMSN 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 104 DQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILG-- 181
Cdd:MTH00208 134 DPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLsl 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 182 IYWITGSLefrdlfqifNHLIYKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF 261
Cdd:MTH00208 214 INFNSWNL---------NEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVF 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 262 LVARLLPLFIAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKAL 341
Cdd:MTH00208 285 LLIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAM 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 342 LFLGSGSIIHSMeaivgyspERSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILDDSwLYSP------ 415
Cdd:MTH00208 365 LFLCSGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAG-LASIsnllsi 435
|
410 420
....*....|....*....|....*
gi 192807049 416 IFAIIACStagLTAFYMFRIYLLVF 440
Cdd:MTH00208 436 ILALIATL---LTAVYSFRIIFFCF 457
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
59-443 |
1.60e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 249.36 E-value: 1.60e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 59 WSW----TINNDLSLEFGYFidsltsimSILITTVGILV----LIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNL 130
Cdd:MTH00137 70 WNWmntlTFDINISFKFDHY--------SIIFTPIALYVtwsiLEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNM 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 131 IQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLllgILGIYWITGSLEFRDLFQIFnhlIYKNEVNLf 210
Cdd:MTH00137 142 FQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---ILAMAWMATNLNSWEIQQIF---ALSKDFDL- 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 211 fvTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMSGIALIGIITVVL 290
Cdd:MTH00137 215 --TLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLF 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 291 GATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspERSQNMVLM 370
Cdd:MTH00137 293 TATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKM 364
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 192807049 371 GGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEI---LDDSWL--YSPIFAIIACStagLTAFYMFRIYLLVFEGY 443
Cdd:MTH00137 365 GGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLnaWALTLTLIATS---FTAVYSLRVVFFVSMGH 439
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
14-442 |
7.63e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 247.07 E-value: 7.63e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 14 LFPTATKNLRrMWAFPSILLLTIVMIFSIDLSIhqIKNssiyqyvWSW----TINNDLSLEFGYFidsltsimSILITTV 89
Cdd:MTH00108 31 NYPLYVKTTI-SYAFIISLIPTMMFIHSGQEMI--ISN-------WHWmtiqTLKLSLSFKLDYF--------SMIFIPV 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 90 GILV----LIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAF 165
Cdd:MTH00108 93 ALFVtwsiMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAI 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 166 VTNRVGDFGLllgILGIYWITGSLEFRDLFQIFnhLIYKNEVNLffvTLCALLLfcGSVAKSAQFPLHVWLPDAMEGPTP 245
Cdd:MTH00108 173 LYNRIGDIGF---ILAMAWFLLNLNSWDLQQIF--MLNPNNSNL---PLMGLLL--AATGKSAQFGLHPWLPSAMEGPTP 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 246 ISALIHAATMVAAGIFLVARLLPLFIAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSY 325
Cdd:MTH00108 243 VSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQP 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 326 RAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspERSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDE 405
Cdd:MTH00108 323 HLAFLHICTHAFFKAMLFMCSGSIIHNL--------NDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDL 394
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 192807049 406 ILD-------DSWLYSpiFAIIACStagLTAFYMFRIYLLVFEG 442
Cdd:MTH00108 395 IIEaantsytNAWALL--ITLIATS---LTAAYSTRIIFFALLG 433
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
67-403 |
3.58e-71 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 247.15 E-value: 3.58e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 67 LSLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYL-RFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSY 145
Cdd:PRK12645 68 LGINFTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSF 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 146 LLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDlfqIFNHLIYKNEVNLFfvTLCALLLFCGSVA 225
Cdd:PRK12645 148 LLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIRE---MIANADEIQNSPLF--IPAMILILLGAFT 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 226 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNL 305
Cdd:PRK12645 223 KSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGIL 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 306 AYSTMSQLGYMMLALGMGS----------------YRAALFHLITHAYSKALLFLGSGSIIHSmeaiVGysperSQNMVL 369
Cdd:PRK12645 303 AFSTVSQLGLIMSLLGIGAaslhyqgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHE----TG-----TRDIRK 373
|
330 340 350
....*....|....*....|....*....|....
gi 192807049 370 MGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSK 403
Cdd:PRK12645 374 LGGLMTIMPITFTIALIGALSMAGLPPFNGFLSK 407
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
67-444 |
9.56e-70 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 242.83 E-value: 9.56e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 67 LSLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYL 146
Cdd:TIGR00940 65 LGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 147 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQ----IFNHLiyknevnlFFVTLCALLLFcG 222
Cdd:TIGR00940 145 LISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIAsadaIRNSP--------LFGTAMVLVLL-G 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 223 SVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMSGIALIGIITVVLGATLAIAQKDIK 302
Cdd:TIGR00940 216 AFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLK 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 303 KNLAYSTMSQLGYMMLALGMGS----------------YRAALFHLITHAYSKALLFLGSGSIIHSmeaivgyspERSQN 366
Cdd:TIGR00940 296 GILAFSTISQLGLIMVLLGLGSpsyhyqgddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHE---------TGTRD 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 367 MVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILD-------------DSWLYspIFAIIACSTAGLTAFYMF 433
Cdd:TIGR00940 367 IRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAeaitahlvnpfdtVTLGY--LFPYVATVASVFTFVYSL 444
|
410
....*....|.
gi 192807049 434 RIYLLVFEGYF 444
Cdd:TIGR00940 445 RFIHGVFFGRP 455
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
67-442 |
1.00e-68 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 242.40 E-value: 1.00e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 67 LSLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYL 146
Cdd:PRK12648 66 LGLNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 147 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQ----IFNHliyknevNLFFVTLCALLLfcG 222
Cdd:PRK12648 146 LIGYWHHRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVVLAagdlIRAH-------PLYPPALVLILL--G 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 223 SVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMSGIALIGIITVVLGATLAIAQKDIK 302
Cdd:PRK12648 217 AFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLK 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 303 KNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHsmEAivGysperSQNMVLMGGLTKHAPI 379
Cdd:PRK12648 297 GLLAYSTISHLGLITLLLGLGSplaAVAAIFHIINHATFKASLFMAAGIIDH--ET--G-----TRDMRRLSGLRRLMPI 367
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 192807049 380 TKTAFLIGTLSLCGIPPFACFWSK----DEILDDSWLYS-----PIFAIIAcstAGLTAFYMFRIYLLVFEG 442
Cdd:PRK12648 368 TATLAMVAAAAMAGVPLLNGFLSKemffAETLDTHLLGSldwllPVAATLA---GAFSVAYSLRFIHDVFFG 436
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
8-440 |
2.85e-66 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 226.01 E-value: 2.85e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 8 IGVGLLLFPTATKnlRRMWAFPSILLLTIVMIFSIDLSIHQIKNSSIYQYVWSWtinNDLSLeFGYFIDSLTSIMSILIT 87
Cdd:PRK06525 12 FIGALVVFFLPGR--RAAELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNL---GDVAL-FGLVIDPVSVLIGFVVV 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 88 TVGILVLIYSDHYMS-------HDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTrPIAANA 160
Cdd:PRK06525 86 LLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQS-PKALRS 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 161 CQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIFNHLiyknevnlffVTLCALLLFCGSVAKSAQFPLHVWLPDAM 240
Cdd:PRK06525 165 ALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSL----------KYLVFLGILFAAWGKSAQLPFYSWLPDAM 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 241 EGPTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMSGI-ALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLA 319
Cdd:PRK06525 235 EAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIGYVgAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 320 LGMGSY------RAALFHLITHAYSKALLFLGSGSIIHSMEaivgysperSQNMVLMGGLTKHAPITKTAFLIGTLSLCG 393
Cdd:PRK06525 315 LSLAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSCG---------TRLLPRLRGVLKKLPLVGVGFCVAALAITG 385
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 192807049 394 IPPFACFWSKDEIL-------DDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVF 440
Cdd:PRK06525 386 VPPFNGFFSKFPIFaagfelsVEYWILLPAMVLLLIESVASFAWFLRWFGRVVF 439
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
69-444 |
1.94e-64 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 228.17 E-value: 1.94e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 69 LEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLI 148
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 149 GFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIFNHLIYKNEVNLFFVTLcaLLLFCGSVAKSA 228
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITL--ILIFIGAAAKSA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 229 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYS 308
Cdd:PRK12649 230 QGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 309 TMSQLGYMMLALGMGSYR-------AALFHLITHAYSKALLFLGSGSIIHSMEaivgysperSQNMVLMGGLTKHAPITK 381
Cdd:PRK12649 310 TISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEAA---------TRDIRKLGGLRKEMPITF 380
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 192807049 382 TAFLIGTLSLCGIPPFACFWSKDEILDDSW----LYSPIFAIIACSTAGLTAFYMFRIYLLVFEGYF 444
Cdd:PRK12649 381 IVASIAALAMAGIPPLNGFLSKEMFYETSVemgaLIGGPFTIIIPAVAVLGGVFTFAYSIKLIDGIF 447
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
57-434 |
5.34e-64 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 229.04 E-value: 5.34e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 57 YVWSWTinNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYL-RFFTYLSFFNTSMLGLVTSSNLIQVYI 135
Cdd:PRK12644 56 EVVPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 136 FWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQifnhliykNEVNLFFVTLC 215
Cdd:PRK12644 134 FWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLA--------DPPTGPAVSVA 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 216 ALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMSGIALIGIITVVLGATLA 295
Cdd:PRK12644 206 VVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRA 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 296 IAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHL---ITHAYSKALLFLGSGSIIHSmeaiVGYSPERSqnmvlMGG 372
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS----TGTRDIRK-----LSG 356
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 192807049 373 LTKHAPITKTAFLIGTLSLCGIPPFACFWSK----DEILDDSWLYSPIFAIIACSTAG--LTAFYMFR 434
Cdd:PRK12644 357 LGRRQPVLAVVAALAAASMAGLPPLLGFVAKeaalEAVLHDGALGPAGPVVLAGIVLGsiLTVAYSLR 424
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
67-445 |
8.40e-61 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 218.09 E-value: 8.40e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 67 LSLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYL-RFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSY 145
Cdd:PRK12646 68 LDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSF 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 146 LLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIFNHLiyKNEVNLFFVTLCALLlfcGSVA 225
Cdd:PRK12646 148 LLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHI--KNHGLFIPMIFMFLL---GAFT 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 226 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNL 305
Cdd:PRK12646 223 KSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGIL 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 306 AYSTMSQLGYMMLALGMG-----------------SYRAALFHLITHAYSKALLFLGSGSIIHSMEaivgysperSQNMV 368
Cdd:PRK12646 303 AYSTISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHEAG---------TRDIR 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 369 LMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILD----------DSWLYSPIFAIIACSTAGLTAFYMFRIYLL 438
Cdd:PRK12646 374 ILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDaltqtgqlsqFSLISMIIIVFIGVIASIFTFTYALYMVKE 453
|
....*..
gi 192807049 439 VFEGYFN 445
Cdd:PRK12646 454 VFWGKYD 460
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
30-464 |
4.47e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 208.84 E-value: 4.47e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 30 SILLLTIVMIFSIDLSIHQIKNSSIYQYVWSWTINNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYLR 109
Cdd:MTH00165 7 SFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINR 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 110 FFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVGDFGLLLGIlGIYWITGSL 189
Cdd:MTH00165 87 FIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSI-AWMMNFGSW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 190 EFrdlfqIFNHLIYKNEVNLFFVTLcalLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 269
Cdd:MTH00165 165 NF-----IFYLDFMKNSFEMLLIGL---LIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 270 FIaIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSI 349
Cdd:MTH00165 237 LF-SSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSI 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 350 IHSMEAivgysperSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILDD---SWLYSPIFAIIACSTaG 426
Cdd:MTH00165 316 IHNMSN--------SQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMvsmSNLNFFIFFLFFFST-G 386
|
410 420 430
....*....|....*....|....*....|....*...
gi 192807049 427 LTAFYMFRIYLLVFEGYFNvHFQNFNGKKNSSFYSISL 464
Cdd:MTH00165 387 LTVSYSFRLIYYSMSGDFN-LKSLNNLSDESKFMLKSM 423
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
30-460 |
8.28e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 202.77 E-value: 8.28e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 30 SILLLTIVMIFSIDLSIHQIKNSSiyqYVWSWTINN--DLSLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGY 107
Cdd:MTH00151 8 SFLLFSYSVFLFPLLGYFGLNGIS---LIFEWELLSvsSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 108 LRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFvTNRVGDFGLLLGILgiywitg 187
Cdd:MTH00151 85 KRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDVLILLSIA------- 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 188 slefrdLFQIFNHLIYKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 267
Cdd:MTH00151 157 ------LLVLLGHWSILSMWDFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFF 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 268 PLFIAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSG 347
Cdd:MTH00151 231 PFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAG 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 348 SIIHSMEAIvgyspersQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILD---DSWLYSPIFAIIACST 424
Cdd:MTH00151 311 SIIHSSSGT--------QDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILEsslMSPTSLLMVLLMFVGV 382
|
410 420 430
....*....|....*....|....*....|....*.
gi 192807049 425 aGLTAFYMFRIYLLVFEGYFNVHFqnFNGKKNSSFY 460
Cdd:MTH00151 383 -GLTALYSARLSFCLVWGSMKSSS--LSSKSDEDFY 415
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
4-451 |
1.24e-55 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 197.61 E-value: 1.24e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 4 VPILIGVGLLLFPTATKNLRRMWAFPS---ILLLTIVMIFSIDLSIHQiknssiYQYVWSWTINNDLSLEFGYFIDSLTS 80
Cdd:COG1008 12 LPLLGALLLLLLPRRNARLARWVALAVsllTLLLSLYLLAGFDPGTGG------FQFVESYPWIPSLGISYHLGVDGISL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 81 IMSILITTVGILVLIYSDHYMSHDQGylRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFW--FTRPIAA 158
Cdd:COG1008 86 PLVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIYAA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 159 NacqKAFVTNRVGDFGLLLGILGIYWITGSLEFrDLFQIFNHLIYKNEVNLFFvtlcaLLLFCGSVAKSAQFPLHVWLPD 238
Cdd:COG1008 164 I---KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAQLLLF-----LAFFIAFAVKVPMFPFHTWLPD 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 239 A-MEGPTPISAlIHAATMVAAGIFLVARL-LPLF-IAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGY 315
Cdd:COG1008 235 AhVEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLFpEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGF 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 316 MMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspeRSQNMVLMGGLTKHAPITKTAFLIGTLSLC 392
Cdd:COG1008 314 VLLGIFALnplGLQGAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVLAALFLLAALASL 384
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 192807049 393 GIPPFACFWSKDEILDDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGYFNVHFQNF 451
Cdd:COG1008 385 GLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAEL 443
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
31-407 |
1.73e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 199.10 E-value: 1.73e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 31 ILLLTIVMIFSIDLSIHQIKNSSIYQYVWSWTINNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYLRF 110
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 111 FTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPiAANACQKAFVTNRVGDFGLllgILGIYWITGSLE 190
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSK-SLSAGMLTALTNRVGDALL---ILSIAWMLMHGN 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 191 FRDLFQIFNHLIyknevnLFFVTLCALLlfcGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLF 270
Cdd:MTH00209 162 WNIFYLNFNSNL------GSVISVLIVL---AAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 271 IAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSII 350
Cdd:MTH00209 233 FSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNII 312
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 192807049 351 HSMeaivgyspERSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEIL 407
Cdd:MTH00209 313 HSH--------GHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL 361
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-442 |
5.07e-55 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 196.73 E-value: 5.07e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 4 VPILIGVGLLLFPTATKNLRRMWAFPSILLLTIVMIFSIdlsihqiknSSIYQYVWSWTINNDLSLEFG---------YF 74
Cdd:PRK12667 9 TPILLVLFAFLLPLLSILLKGNRKIQKIYALLVSLITLI---------LSILLFIQVYSSNKPIVYLFGgwpapigivYE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 75 IDSLTSIMSILITTVGILVLIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTR 154
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 155 PIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIFNHLIYKNEV----NLFFVTLCALLLFCGSVA-KSAQ 229
Cdd:PRK12667 160 GDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGglagNPPLALGVALALALWAFTiKAAI 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 230 FPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFIAIPSIMSG--------IALIGIITVVLGATLAIAQKD 300
Cdd:PRK12667 240 FPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFGISPSLIDfraalspiLIILGAVSAIIGALMMVVQKD 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 301 IKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspeRSQNMVLMGGLTKHA 377
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAGLGRKM 389
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 192807049 378 PITKTAFLIGTLSLCGIPPFACFWSKdEILDDSWLYS--PIFAIIACSTAGLTAFYMFRIYLLVFEG 442
Cdd:PRK12667 390 PIASFAFLIGALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-442 |
1.92e-54 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 194.33 E-value: 1.92e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 1 PLPVPI-LIGVGLLLFPTATKNLRRMWAF-PSILLLTIVMIFSIDLSIHQIKNSSIYQYVWSWTInndlslefGYFIDSL 78
Cdd:PRK08375 7 PLLVAVpLLAAALIVLLPKRRRLRWALALlVAALTFALAISLLPQVLDGGVIAYVVGGWPPGIGI--------ELRADSL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 79 TSIMSILITTVGILVLIYSDHYMSHDQGylRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPiAA 158
Cdd:PRK08375 79 SALFLLVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR-AL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 159 NACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIFNHLiykNEVNLFFVtLCALLLFcgsvAKSAQFPLHVWLPD 238
Cdd:PRK08375 156 AAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAEN---PTVVTAFG-FVLLALA----LKAAVFPLHTWLPR 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 239 AMEGPTPISALIHAATMVAAGIFLVARLL-----PLFIAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQL 313
Cdd:PRK08375 228 AYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQM 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 314 GYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIihsmEAIVGysperSQNMVLMGGLTKHAPITKTAFLIGTLS 390
Cdd:PRK08375 308 GYILLGLALLTPLalaAGLLHLLHHALMKGALFLAAGAI----EVTYG-----TRRLSELSGLGRRMPLTAAAFAVASLS 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 192807049 391 LCGIPPFACFWSKDEIL---DDSWLYSPIFAIIACSTagLTAFYMFRIYLLVFEG 442
Cdd:PRK08375 379 LIGVPPTSGFVSKWYLVvgaVEAGQWLVLAVLLASSL--LALLYFLRIWYRAFFG 431
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-442 |
1.07e-52 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 190.31 E-value: 1.07e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 4 VPILIGVGLLLFPTATKNLRRMWAfpsILLLTIVMIFSIDLSIHQIKNSSIYQYVWSWTINNDLSLEFGYF-------ID 76
Cdd:PRK08376 13 IPLFGAFSMPIVSLLGGKAREIWA---VLISFLTLIVALLVFYEVWNNGTIVYVLGAESPTLTLPFGSGGFpiriiweVD 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 77 SLTSIMSILITTVGILVLIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPI 156
Cdd:PRK08376 90 LFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWE 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 157 AANACQKAFVTNRVGDFGLLLGILGIYWITGSLEfrdlfqiFNHLIYKNEVNLFFVTLCALLLFCGSVA-KSAQFPLHVW 235
Cdd:PRK08376 170 AIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLN-------MAYLAVKMSENPTVVAKIALALFIAGLAmKSGAVPVHMW 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 236 LPDAM-EGPTPISALIHAATmvAAGIFLVARLLpLFIAIPSIMSG-----IALIGIITVVLGATLAIAQKDIKKNLAYST 309
Cdd:PRK08376 243 LPDAYpAAPSSISAMLLVIK--QAGLYALARVL-FSIYGPAINLAtvgwvIIILGCLTMFVGVAMAVVQKDVKRLLAYHS 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 310 MSQLGYMMLALGMG---------------SYRAALFHLITHAYSKALLFLGSGSIIHSMEaivgysperSQNMVLMGGLT 374
Cdd:PRK08376 320 VSQIGYMLLGLGVGlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIYETG---------TRNLNELGGLA 390
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 192807049 375 KHAPITKTAFLIGTLSLCGIPPFACFWSKDEILDDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEG 442
Cdd:PRK08376 391 RTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
33-439 |
8.21e-51 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 186.12 E-value: 8.21e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 33 LLTIVMIFSIDLSIHQIKNSSIYQYVWSWTINNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYLRFFT 112
Cdd:MTH00207 13 LLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFIS 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 113 YLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVGDFGLLLGIlgiYWITGSlefr 192
Cdd:MTH00207 93 LVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSI---GWTLNQ---- 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 193 dlfqifNHLIYKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIA 272
Cdd:MTH00207 165 ------GHWSITNMWQTDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSS 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 273 IPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHS 352
Cdd:MTH00207 239 TYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHS 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 353 MeaivgyspERSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILDDSWLY---SPIFAIIACSTaGLTA 429
Cdd:MTH00207 319 H--------HHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYphnSLMILMIFLAT-ALTA 389
|
410
....*....|
gi 192807049 430 FYMFRIYLLV 439
Cdd:MTH00207 390 AYSTRFTLAV 399
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
2-433 |
1.12e-50 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 190.25 E-value: 1.12e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 2 LPVPILIGVGLLLFPTATKNLRRMWAFPSILLLTIVMIFSIDLSIHQIKNSSI-YQYVWSWTI-NNDLSLEFGYFIDSLT 79
Cdd:PRK12650 2 LAVLALAALAVVLAPPLVRVLDRKAGWPLAAIFVAAAGLLLKELPPILDGDALtWSVTWIPDLlGNGVDVNLALRADALS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 80 SIMSILITTVGILVLIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFwfTRPIAAN 159
Cdd:PRK12650 82 LFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR--SGSGGEA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 160 ACQKAFVTNRVGDFGLLLGILGIYWITGSLEfrdLFQIFNHLIYKNevNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDA 239
Cdd:PRK12650 160 GSIRTLILTFFGGLTLLAAVAIAATQTGTTS---LSGILHSDVWAE--KPGLTTVVAVLIAVAAFTKSAQFPFHFWLPEA 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 240 MEGPTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLA 319
Cdd:PRK12650 235 MAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVAT 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 320 LGMGS---YRAALFHLITHAYSKALLFLGSGSIIHsmEAivgyspeRSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPP 396
Cdd:PRK12650 315 IGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDH--QA-------GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPP 385
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 192807049 397 FACFWSKDEILdDSWLYSPIFA---IIACSTAGLTAFYMF 433
Cdd:PRK12650 386 LFGFVSKEGML-TAFLEAPGGNagvVLLLVGAALGAVFTF 424
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
2-435 |
1.27e-41 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 157.97 E-value: 1.27e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 2 LPVPILIGVGLLLF---PTATKNLRRMWAFPSILLLTIVMIFSIdlsihqiknssiyqyvWSWTINNDLSLEFGYFIDSL 78
Cdd:COG1007 8 LPEIILLLGALVLLlldLFLPRRSRRLLAGLALLGLLLALALLL----------------LALGGGTGTAFGGMFVVDGF 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 79 TSIMSILITTVGILVLIYSDHYMSHDQGYLRFFTYLSFFNTS-MLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIA 157
Cdd:COG1007 72 ALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRS 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 158 ANACQKAFVTnrvGDFG---LLLGILGIYWITGSLEFRDLFQIFNHliykNEVNLFFVTLCALLLFCGSVAKSAQFPLHV 234
Cdd:COG1007 152 SEAALKYFLL---GALSsgfLLYGISLLYGATGSLNLAGIAAALAA----GGANSPLLLLGLVLVLAGLAFKLSAVPFHM 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 235 WLPDAMEG-PTPISALIHAATMVAAgIFLVARLL-PLFIAIPSIMSGI-ALIGIITVVLGATLAIAQKDIKKNLAYSTMS 311
Cdd:COG1007 225 WTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLvEAFPGLAADWQLLlAVLAVLSMTVGNLAALAQTNVKRMLAYSSIA 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 312 QLGYMMLALGMGS---YRAALFHLITHAYSKALLFLgsgsIIhsmeAIVGYSPERSQNMVLMGGLTKHAPITKTAFLIGT 388
Cdd:COG1007 304 HAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VI----LLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFL 375
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 192807049 389 LSLCGIPPFACFWSKDEILDDSW---LYspIFAIIACSTAGLTAFYMFRI 435
Cdd:COG1007 376 LSLAGIPPTAGFFGKFYVFSAAVeagLY--WLAVIAVLNSVISAYYYLRV 423
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
75-442 |
1.63e-41 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 160.82 E-value: 1.63e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 75 IDSLTSIMSILITTVGILVLIYSDHYMSHDQGY----LRFFTYLsfFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGF 150
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFREYEGKgpgaMGFFYNL--FLASMVLVLLADDAFSFLVAWETMSLSSWFLVIA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 151 WFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLfqifnhliykNEVNL--FFVTLCALLLFCGSVAKSA 228
Cdd:PRK06521 156 NHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAM----------RAAHLspFWASLVFLLALFGFGAKAG 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 229 QFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFIAIPSIMSGIAL--IGIITVVLGATLAIAQKDIKKNL 305
Cdd:PRK06521 226 LVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWWWGVLVlaLGAISAVLGVLYALAEHDLKRLL 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 306 AYSTMSQLGYMMLALGMG--------------SYRAALFHLITHAYSKALLFLGSGSIIHSMEaivgyspERsqNMVLMG 371
Cdd:PRK06521 305 AYSTIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATG-------TR--DMEKLG 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 372 GLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEIL--------DDSWLYS---PIFAIIACSTAGLTAFYMFRIYLLVF 440
Cdd:PRK06521 376 GLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLqsllsspgLPQWGLKlavPIAAAMLALTAALAAMCFVKFYGITF 455
|
..
gi 192807049 441 EG 442
Cdd:PRK06521 456 LG 457
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
4-442 |
5.65e-39 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 150.74 E-value: 5.65e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 4 VPILIGVGLLLFPTATKNLRRMWAFPS---ILLLTIVMIFSIDLSIHQIKnsSIYQYVWSWTINndLSLEFGyfIDSLTS 80
Cdd:PRK05846 12 LPLIGGLLVLLTERFGARLARWIALIGtllTLLLSLVLWIGFDSSNAGFQ--FVEKHPWIPRFG--ISYHLG--VDGISL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 81 IMSILITTVGILVLIYSDHYMSHDQGylRFFTYLSFFNTSMLGLVTSSNLIQVYIFWE--LVGMcsYLLIGFW--FTRPI 156
Cdd:PRK05846 86 LLVVLTALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEamLIPM--YFLIGVWggKNRIY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 157 AANacqKAFVTNRVGDFGLLLGILGIYWI----TGSLEFRDLfqifnhliYKNEVNLFFVTLCALLLFCGSVAKSAQFPL 232
Cdd:PRK05846 162 AAT---KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADL--------LNLPLPPGVQYWLFLAFFIAFAVKMPMFPL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 233 HVWLPDAMEGPTPISALIHAATMVAAGIF-LVARLLPLFIAIPSIMSGIALI-GIITVVLGATLAIAQKDIKKNLAYSTM 310
Cdd:PRK05846 231 HTWLPDAHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDASHEFAPIIITlGVIAIIYGALVALAQTDIKKLIAYSSI 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 311 SQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIHSMeaivgyspeRSQNMVLMGGLTKHAPITKTAFLIG 387
Cdd:PRK05846 311 SHMGFVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVLYDRL---------HTRDIADYGGLAKVMPVLAAFFLFF 381
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 192807049 388 TLSLCGIPPFACFWSKDEILDDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEG 442
Cdd:PRK05846 382 AMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFG 436
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
11-350 |
1.27e-38 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 150.23 E-value: 1.27e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 11 GLLLFPTATKNLRRMWAFPSILLLTIVMIFSIDLSIHqiknssiyqyvWSWTINNDLSLefgyfiDSLTSIMSILITTVG 90
Cdd:PRK08168 20 GLLLSRWLTRALWRIAQAASLAGLFLALLGLVLFATG-----------AAWPAAAWLEV------SGLGLVMAALVQLLG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 91 ILVLIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRV 170
Cdd:PRK08168 83 WVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADRL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 171 GDFGLLLGILGIYWITGSLEFRDLFQIFNhliykNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALI 250
Cdd:PRK08168 163 AELLLLAAAALAYLEVGSLSLSALWAHLA-----AQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 251 HAAtMVAAGIFLVARLLPLFIAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALF 330
Cdd:PRK08168 238 HAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALL 316
|
330 340
....*....|....*....|
gi 192807049 331 HLITHAYSKALLFLGSGSII 350
Cdd:PRK08168 317 HLVAHSLYKAHAFLSASEAV 336
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
52-403 |
4.41e-38 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 150.15 E-value: 4.41e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 52 SSIYQYVWSWTIN---------NDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYLRFFTYLSFfnTSML 122
Cdd:PRK08668 35 PLLFLIKLYFTLKvgtgekltlFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVL 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 123 GLVTSSNLIQVYIFWELVGMCSYLLIgfWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIFnhli 202
Cdd:PRK08668 113 GVFLANDLLTLYIFWEIMTFSSFMMV--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGL---- 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 203 yKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLLP---LFIAIPSI 276
Cdd:PRK08668 187 -INDTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtkLFSEFGTY 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 277 MSG------IALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSG 347
Cdd:PRK08668 266 RGVplfnyiLAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFA 345
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 192807049 348 SIIHSMeaivgyspeRSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSK 403
Cdd:PRK08668 346 AVIYRT---------GTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
73-440 |
6.61e-38 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 147.27 E-value: 6.61e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 73 YFIDSLTSIMSILITTVGILVLIYSDHYMShDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWF 152
Cdd:PRK05777 69 LVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRR 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 153 TRPIAANACQKAFVtnrVGDFG---LLLGILGIYWITGSLEFRDLFQIFNHLIYKNEVNLF-FVTLCALLLFcgsvaKSA 228
Cdd:PRK05777 148 DRRRSLEAAIKYFV---LGALAsgfLLYGMSLLYGATGSLSFAGIAKALADGSGNSLLLLFgLVFLLVGLAF-----KLS 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 229 QFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMSGI-ALIGIITVVLGATLAIAQKDIKKNLA 306
Cdd:PRK05777 220 AVPFHMWTPDVYEGaPTPVTAFLATAPKIAAFAVLLRLLVVAFGGLSEDWQQVlAIIAIASMLVGNLAALSQTNIKRLLA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 307 YSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKallfLGSGSIIHSMEAIVGYSPERSQnmvlMGGLTKHAPITKTA 383
Cdd:PRK05777 300 YSSIAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGEAESISD----FAGLSKRSPLLAAV 371
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 192807049 384 FLIGTLSLCGIPPFACFWSKDEIL------DDSWLyspifAIIACSTAGLTAFYMFRIYLLVF 440
Cdd:PRK05777 372 MTIFMLSLAGIPPTAGFWGKFYVFeaaveaGLWWL-----AVIGVLNSAIGAFYYLRVIKLMY 429
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
4-442 |
1.25e-35 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 140.85 E-value: 1.25e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 4 VPILIGVGLLLFPTATKNLRRMWAFPS---ILLLTIVMIFSIDLSIHQiknssiYQYVWSWTINNDLSLEFGYFIDSLTS 80
Cdd:TIGR01972 7 LPLIGALLILLLPSNKDGKARWIALVValaTLLLSLLLLFQFDPTGSG------FQFTEDIPWIPALGISYHLGVDGISL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 81 IMSILITTVGILVLIYSDHYMSHDQGYlrFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWfTRPIAANA 160
Cdd:TIGR01972 81 LLVLLTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 161 CQKAFVTNRVGDFGLLLGILGIYWITGslefrDLFQIFNhlIYKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAM 240
Cdd:TIGR01972 158 AMKFFLYTLAGSLLMLLAILGLYFLGG-----GTFDLLE--LLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAH 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 241 -EGPTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMSGIALI-GIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMML 318
Cdd:TIGR01972 231 vEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAAlGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 319 ALGMGSYRA---ALFHLITHAYSKALLFLGSGSIihsmeaivgYSPERSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIP 395
Cdd:TIGR01972 311 GIFSFNELGisgAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLP 381
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 192807049 396 PFACFWSKDEILDDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEG 442
Cdd:TIGR01972 382 GTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFG 428
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-440 |
8.75e-35 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 138.41 E-value: 8.75e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 6 ILIGVGLLLFPTATKN--LRRMWAFPSILLLTIVMIFSIDLSIhqiknssIYQYVWSWTINNDLSLEFGYFIDSLTSIMS 83
Cdd:PRK06589 17 LLVGALNLTSPFATKKdsFIRNFLLITISIFFFGNILLIDLLF-------LKGIRAQFELMDFGNYSIGLHLEPLGLIFL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 84 ILITTVGILVLIYSDHYMSHDQGYLRFfTYLSFFNTSML---GLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANA 160
Cdd:PRK06589 90 LLIGFLWICALLYTPKYLAINNIDSSS-RFLFFFNLTILigvLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGG 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 161 CQKAFVTNRVGDFGLLLGILGIYWITGSLEFRdlfqifnhliyKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAM 240
Cdd:PRK06589 169 YKYLKILMISALLLFLPAVILIYTKTGNLDFV-----------SGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAM 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 241 EGPTPISALIHAATMVAAGIFLVARLLpLFIAIPSIMSGIA-------LIGIITVVLGATLAIAQKDIKKNLAYSTMSQL 313
Cdd:PRK06589 238 VAHYPVSALLHAVIVVKTGLFCIYKIL-LYIFGLSYLQRIFaefnwliFIPIVSIFYSSLKALKTDNIKKILAYSTISQL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 314 GYMMLALGM---GSYRAALFHLITHAYSKALLFLGSGSIihsmeaivgYSPERSQNMVLMGGLTKHAPITKTAFLIGTLS 390
Cdd:PRK06589 317 SLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDKLHGTSKSFPLISFIISISSLS 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 192807049 391 LCGIPPFACFWSKDEIL-----DDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVF 440
Cdd:PRK06589 388 LIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKILSSIY 442
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
67-454 |
5.75e-33 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 133.89 E-value: 5.75e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 67 LSLEFGYFIDSLtsIMSILITTVGILVLIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYL 146
Cdd:MTH00095 37 LSLKFNFYFNSL--LFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 147 LIGFWFTrpiaANACQKA---FVTNRVGDFGLLLgilgiywitgsleFRDLFQIFNHLIYKNEvnlFFVTLCALLLFCGS 223
Cdd:MTH00095 115 LVLFYNN----WDSNSGAmntALTNRIGDFFIFL-------------FFSGFIFSSYYFFSFS---FFSSSMILMLLLTS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 224 VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIAIpSIMSGIALIGIITVVLGATLAIAQKDIKK 303
Cdd:MTH00095 175 FTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEEDMKK 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 304 NLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAivgysperSQNMVLMGGLTKHAPITKTA 383
Cdd:MTH00095 254 VVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFG--------QQDGRNYSNNGNLPMFIQLQ 325
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 192807049 384 FLIGTLSLCGIPPFACFWSKDEILDDSWL--YSPIFAIIACSTAGLTAFYMFRIYLLVFEGYFNVHFQNFNGK 454
Cdd:MTH00095 326 LLVTLFCLCGLMFTSGMVSKELILELFFFnnYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNVYSSSV 398
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
6-403 |
9.22e-33 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 134.47 E-value: 9.22e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 6 ILIGVGLLLFPTATK---NLRRMWAFPSILLLTI-VMIFSIDLSIHQIKNSSIYQYVWSWTInndlSLEFGYFIDSLTSI 81
Cdd:PRK08667 6 FLGAILLLLAAAVIPlvfRHKRKRVWQSVLWLVIaIALLLFAGSLQLFTGNPLDIPLWGIAP----GLDITFHIDRLAAF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 82 MSILITTVGILVLIYSDHYMSHDQGYLR---FFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAA 158
Cdd:PRK08667 82 FIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 159 NACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLfqifnhliyknEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPD 238
Cdd:PRK08667 162 RAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPL-----------GASAGILSLVFLLLFLGFGIKAGIIPFHKWLPY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 239 AMEG-PTPISALIhAATMVAAGIFLVARLLPLFIAiPSIMSG--IALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGY 315
Cdd:PRK08667 231 AHPAsPSNVSALM-SGVMLKVAVYGLVRFLMDVLS-PELWWGvlILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGI 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 316 MMLALG--------------MGSYRAALFHLITHAYSKALLFLGSGSIIHSMEaivgysperSQNMVLMGGLTKHAPITK 381
Cdd:PRK08667 309 ILMGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHATG---------TRNIEKMGGLVKLMPYTS 379
|
410 420
....*....|....*....|..
gi 192807049 382 TAFLIGTLSLCGIPPFACFWSK 403
Cdd:PRK08667 380 ALFLVGAVSIAALPPFNGFASE 401
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
123-407 |
8.43e-32 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 129.89 E-value: 8.43e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 123 GLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPiAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIfnhli 202
Cdd:PRK08377 123 GMIATGDIFNLFVFMEITAITAYALTAYNKTGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQL----- 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 203 yKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLPLFIAIPSIMSGIA 281
Cdd:PRK08377 197 -AGTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSVLK 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 282 LI---GIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSMea 355
Cdd:PRK08377 275 LViimATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITL-- 352
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 192807049 356 ivgyspeRSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEIL 407
Cdd:PRK08377 353 -------GGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRII 397
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-443 |
3.74e-31 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 127.76 E-value: 3.74e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 1 PLPVPILIGVgLLLFPTATKNLRRMWAFPSILLLtivMIFSIDLSIHQIKNSSIYQYVWSWTINNDLSLefgyFIDSLTS 80
Cdd:PRK07691 9 PILIPVITAI-LLIFLGKRPIIQRYVALIGSLLT---LVAAIILVANVYKHGIQTLELGNWKAPFGIVF----VADMFAA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 81 IMSILITTVGILVLIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRpIAANA 160
Cdd:PRK07691 81 LLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQLRE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 161 CQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIFNHLIYKNEVnlfFVTLCALLLFCGSVAKSAQFPLHVWLPDAM 240
Cdd:PRK07691 160 SIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTG---LITVVAILFLFVFATKAGLFPLYFWLPGSY 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 241 EGP-TPISALIhAATMVAAGIFLVARLLPLFIAIPSIMSG--IALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMM 317
Cdd:PRK07691 237 YAPpIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSFTHylILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVIL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 318 LALGMG---SYRAALFHLITHAYSKALLFLgsgsIIHSMEAIVGYSPERSqnmvlMGGLTKHAPITKTAFLIGTLSLCGI 394
Cdd:PRK07691 316 VGVAMMtesGMIGAIYYLIHDMIVKAALFL----LIGIMIKITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSLAGI 386
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 192807049 395 PPFACFWSKDEILDDSWLY-SPIFAIIACSTAGLTAFYMFRIYLLVFEGY 443
Cdd:PRK07691 387 PPLSGFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWGE 436
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
74-402 |
1.03e-30 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 126.58 E-value: 1.03e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 74 FIDSLTSIMSILITTVGILVLIYSDHYMSHDQ-------GYLRFftYLSFFNT---SMLGLVTSSNLIQVYIFWELVGMC 143
Cdd:PRK06458 66 FIDDLNVFFLALIGVVGFLTSLYSIGYMRHEVehgelspVTLRL--YYGMYQLflfTMLLALTSNNLGLMWVAIEATTLS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 144 SYLLIGFWFTRPiAANACQKAFVTNRVG-DFGLLLGILGIYWITGSLEFRDLFQIFNHLI-YKNEVNLFFVTLCALLLFC 221
Cdd:PRK06458 144 SALLVGIYRTRA-SLEAAWKYIIICSVGvAFALFGTILVYANAATVMGDGEMAILWTELLkHASLLDPTLMKLAFVFLLI 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 222 GSVAKSAQFPLHVWLPDA-MEGPTPISA-----LIHAATMVAAGIFLVARLLPLFIAIPSIMSGIaliGIITVVLGATLA 295
Cdd:PRK06458 223 GFGTKVGLFPMHAWLPDAhSEAPSPVSAllsgvLLNVALYAVLRYYILIDAAIGSDFPGRLLLIF---GLLSVLVAAFFL 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 296 IAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspeRSQNMVLMGG 372
Cdd:PRK06458 300 LRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKY---------GTRDINVIRG 370
|
330 340 350
....*....|....*....|....*....|
gi 192807049 373 LTKHAPITKTAFLIGTLSLCGIPPFACFWS 402
Cdd:PRK06458 371 LLKVSPLTGWGLMLGALAIAGMPPFGVFIS 400
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
5-443 |
2.75e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 121.98 E-value: 2.75e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 5 PILIGVGLLLFPTATKNLRRMWAFPSilLLTIVMIFSidlsihqiknsSIYQYVWSWTINNDLSLEfgyfIDSLTSIMSI 84
Cdd:PRK07234 12 PFLLGFAIYLLPKLDRNLALGMAIVS--AVYALGLVA-----------SMVPLELTLLDNFGVTLR----ADALSGYFIL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 85 LITTVGILVLIYSdhyMSHDQGYLrFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKA 164
Cdd:PRK07234 75 TNALVTLAVIFYC---WESAKTRF-FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 165 FVTNRVGDFgLLLGILGIYWITGSLEFRDLfqifnhliykNEVNLFFVTLcallLFCGSVAKSAQFPLHVWLPDAMEGPT 244
Cdd:PRK07234 151 FYSNVAMLF-YLIGAVLVYQANGTFAFSGL----------ATADPEAFAL----IALGLLVKGGIFVSGLWLPLTHSEAE 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 245 PISALIHAATMVAAGIFLVARLLPLfiaIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGs 324
Cdd:PRK07234 216 PPVSALLSGVVVKAGVFPLVRCALD---VPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG- 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 325 yraALFHLiTHAYSKALLFLGSGSIihsmeaivgYSPERSQNMVLMGGLTKHAPITktaflIGTLSLCGIPPFACFWSKD 404
Cdd:PRK07234 292 ---GLYAL-AHGLVKSTLFLCAGAL---------PSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKV 353
|
410 420 430
....*....|....*....|....*....|....*....
gi 192807049 405 EILddsWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGY 443
Cdd:PRK07234 354 LTL---KNLLPWQAIALNLAAVGTAASFWKFIFLPFSAD 389
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
1-440 |
9.73e-29 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 120.44 E-value: 9.73e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 1 PLPVPILIGVGLLLFPTATKnLRRMWAFPSILLLTIVmifSIDLSIHQIKNSSIYQYVWSWtinndlSLEFG--YFIDSL 78
Cdd:PRK12663 9 PMLLPLLCGLVLVFLRNRDR-LQRYLAIGTLTILTLI---SLALLIYVQRHGPITLDFGGW------LPPFGiqFTGDSL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 79 TSIMSILITTVGILVLIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPiAA 158
Cdd:PRK12663 79 SALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQERE-QL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 159 NACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIFNHLiyknEVNLFFVTLCALLLFCGSVaKSAQFPLHvWLPD 238
Cdd:PRK12663 158 RGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDM----GDTATLTTIALLFLLAFGM-KAALFPFM-WLPA 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 239 AMEGP-TPISALIhAATMVAAGIFLVARLLP-LFIAIPSIMSG-IALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGY 315
Cdd:PRK12663 232 AYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHPlLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGF 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 316 MMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIhsmeAIVGYSPERSqnmvlMGGLTKHAPITKTAFLIGTLSLC 392
Cdd:PRK12663 311 ILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLV----RLTGYRSLQY-----LGGLYRKEPLFGALFLILIFAIG 381
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 192807049 393 GIPPFACFWSKDEILD---DSWLYspIFAIIACSTAGLTAFYMFRIYLLVF 440
Cdd:PRK12663 382 GLPPFSGFWGKVLLVQgalDNGAY--ILLALMLITSLITMYSLFRIFFLAY 430
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
75-372 |
9.59e-28 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 117.83 E-value: 9.59e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 75 IDSLTSIMSILITTVGILVLIYSDHYMSHDQGYLRFFTYLSF--FNTSMLGLvtSSNLIQVYIFWELVGMCSYLLIGFWF 152
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGATLLGLTLLIGLNK 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 153 TRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSlefrdlFQIFNHLIYKNEVNL--FFVTLCALLLFCGSVAKSAQF 230
Cdd:PRK08601 148 GWKVAREAAKISGMLFLISWLALALAIVWLFIATGE------WQLTSVLSNENLAQLgtWEKTGINLLLILAVMIPAAQW 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 231 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLFIA-IPSIMsgIALIGIITVVLGATLAIAQKDIKKNLAYST 309
Cdd:PRK08601 222 PFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHDdIAQIL--LLIFASISVLIGTGISLVQVDYKRQLVGST 298
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 192807049 310 MSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEaIVGYSPERSQNMVLMGG 372
Cdd:PRK08601 299 MAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN-IVKQANEKKSYLWIVVG 360
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
73-459 |
1.47e-27 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 116.59 E-value: 1.47e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 73 YFIDSLTSIMSILITTVGILVLIYSDHYMSHDQ-GYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFW 151
Cdd:TIGR01770 66 FIVDNFALLIKLILLLSTLLTFFFALSYLSKEKiNKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLK 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 152 FTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIFNHlIYKNEVNLFfvtLCALLLFCGSVAKSAQFP 231
Cdd:TIGR01770 146 RKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSN-GMLNISLLL---LGIVLILVGLLFKLSAVP 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 232 LHVWLPDAMEG-PTPISALIHAATMVAA-GIFLVARLLPLFIAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYST 309
Cdd:TIGR01770 222 FHMWVPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 310 MSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFlgsgSIIHSMEAivgYSPERSQNMVLMGGLTKHAPITKTAFLI 386
Cdd:TIGR01770 302 ISHVGYILIGLLAGTlegIKAVLFYIFIYALMSLGAF----GVLSLLRS---YKDEWIEYISDFAGLFKTNPILAILILI 374
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 192807049 387 GTLSLCGIPPFACFWSKDEIL-----DDSWLYSPIFAIIACstagLTAFYMFRIYLLVFEGYFNVHFQNFNGKKNSSF 459
Cdd:TIGR01770 375 FMFSLAGIPPLAGFFGKFYVFfallkSGLYWLAVIAVLTSV----IGAFYYLRVVKVMYFDKPERRIPSNPQSKAQSL 448
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
2-408 |
2.20e-25 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 111.14 E-value: 2.20e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 2 LPVPILIGVGLLLFPTATKNLRRMWAfPSILLLTIVMIFSIDLSIHqiknssiyqyvwsWTIN---NDLSLefgYFIDSL 78
Cdd:PRK12668 6 LPPALVFIAGALLVPFLPGRARKALL-LLAPVLAVLAVLTVPEGTY-------------LTVTflgFDLVL---GRVDKL 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 79 TSIMSILITTVGILVLIYSDHymSHDQG-YLRFFTYLSffntSMLGLVTSSNLIQVYIFWELVGMCSYLLIgfWFTR-PI 156
Cdd:PRK12668 69 SRVFGLIFGIMAFIGVIYALH--VKDPGqHVAALLYVG----SALGAVFAGDLLTLFVFWELMAFTSTFLV--WARGtKA 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 157 AANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFrDLFQIFNhliyknevnlffvTLCALLLFCGSVAKSAQFPLHVWL 236
Cdd:PRK12668 141 AVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLG-------------GTAAWLILIGFGVNAAFPPLHAWL 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 237 PDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIAIpsimsgiALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYM 316
Cdd:PRK12668 207 PDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELL-------IYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYM 279
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 317 MLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIHSmeaiVGYSpersqNMVLMGGLTKHAPITKTAFLIGTLSLCG 393
Cdd:PRK12668 280 VAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYR----TGTE-----KLTELGGLYRSMPLTALFCLVGALSISA 350
|
410
....*....|....*
gi 192807049 394 IPPFACFWSKDEILD 408
Cdd:PRK12668 351 FPLFSGFVSKSMIIS 365
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-435 |
3.21e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 100.58 E-value: 3.21e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 4 VPILIGVGLLLfptaTKNLRRMWAFPSIlllTIVMIFSIDLSIH-QIKNSSIYQY-VWSWTINNDLSLEfgyfIDSLTSI 81
Cdd:PRK12662 12 IPLLSAVVCAL----LKNRKLVKIISCI---VVAVSFFIALVLFvQVYSGGVIKYsLGGWGPPYGIELR----VDILSAT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 82 MSILITTVGILVLIYSDHYMSHDQGYLRFFTYLSFFNTS---MLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPiAA 158
Cdd:PRK12662 81 MLVLVNFIAVMSVLYGIYPNRKEISVNKIPSFYSAFLLClggLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-AL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 159 NACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIFNHLiYKNEVnlffVTLCALLLFCGSVAKSAQFPLHVWLPD 238
Cdd:PRK12662 160 VAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDL-PTNRA----IQIGVLFIMVGLFIKAALFPFHKWLIQ 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 239 AM-EGPTPISALIhAATMVAAGIFLVARLL------PLFIAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMS 311
Cdd:PRK12662 235 AYsEAPSFISVFF-SGTSTKVMIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSIS 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 312 QLGYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIIHSMEaivgysperSQNMVLMGGLTKHAPITKTAFLIGT 388
Cdd:PRK12662 314 HIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFG---------TTKLEDCLNLWKSMPKITLAFVLLS 384
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 192807049 389 LSLCGIPPFACFWSKDEILD---DSWLYSPIFAIIACStaGLTAFYMFRI 435
Cdd:PRK12662 385 LSLIGMPPTSGFVAKWYILDafiKSNAWIGLVVLLVGS--GLSVIYVWKI 432
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
28-440 |
5.48e-22 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 100.34 E-value: 5.48e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 28 FPSILLLTIVMIFSIDLSihqiknSSIYQYVWSWTINNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGY 107
Cdd:MTH00063 2 VLLVSLLLCLLIFFLFLV------GVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYAS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 108 LRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTrPIAANACQKAFVTNRVGDFGLLLgILGIYWITG 187
Cdd:MTH00063 76 FLLNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFL-LIGLSCWGG 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 188 SlefrdlfqifnhliyknevNLFFVTLCALLLFcgsVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlL 267
Cdd:MTH00063 154 S-------------------GSFLCCLFFFLIV---FTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-Y 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 268 PLFIAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSG 347
Cdd:MTH00063 211 DYLLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVG 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 348 SIihsmeaIVGYSPERSQNMVLMGGLTKHAPITKTAFLIgtLSLCGIPPFACFWSKDEILDD--SWLYSPIFAIIACSTA 425
Cdd:MTH00063 291 DV------MSGSGGSQSSNCVYSSILYGSWNLFYLFLLV--LGLSGVPFIGVFFSKHFLLSSfsSVVFNVSLLLVVILCV 362
|
410
....*....|....*
gi 192807049 426 GLTAFYMFRIYLLVF 440
Cdd:MTH00063 363 FLSYLYSFRLCLILF 377
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
2-437 |
2.09e-21 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 98.25 E-value: 2.09e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 2 LPVPILIGVGLLLFPTATKNLRRMWAFPS--ILLLTIVMIFSIDLSIHQIKnssiYQYVWSWtiNNDLSLEFGYFIDSLt 79
Cdd:PRK07363 8 LPILGAIIIGFFPGNLPSARLRQITLVFAvlVLAWSLFLLTQFDLSDPGMQ----FQEYLPW--NEPLGLSYSLGVDGL- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 80 SIMSILITTVGILVLIYSDHYMSHDQGYlrFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPiAAN 159
Cdd:PRK07363 81 SLPLLVLNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-RGY 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 160 ACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRdlfqiFNHLIYKN-EVNLFFVTLCALLLFCGsvAKSAQFPLHVWLPD 238
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFD-----YDAISTQNlSLNTQLILLTGLLLGFG--IKIPLVPLHTWLPD 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 239 AMEGPTPISALIHAATMVAAGIFLVARL-LPLFIAIPSIMS-GIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYM 316
Cdd:PRK07363 231 AYTEASPAVAILLGGVLAKLGTYGLLRFgLQLFPQTWSLVApGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYI 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 317 MLALGMG---SYRAALFHLITHAYSKALLFLGSGSIihsmEAIVGysperSQNMVLMGGL---TKHAPITKTAFLIGTLS 390
Cdd:PRK07363 311 LVAAAAGtqlSLLGAVAQMISHGLILALLFHLVGIV----ERKVG-----TRDLDVLNGLmnpIRGLPLTSALLVLAGMA 381
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 192807049 391 LCGIPPFACFWSKDEILDDSWLYSPIFAIIACSTAGLTAFYmFRIYL 437
Cdd:PRK07363 382 SAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY-FVILL 427
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
31-442 |
4.78e-21 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 97.08 E-value: 4.78e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 31 ILLLTIVMIFSIDLSIHQIKNSSIYQYVwswtinNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYlrf 110
Cdd:PRK06473 39 LLLLSLVLAFQFDPGNPNQQFTEFIPWI------DSLGLSYHLGVDGLSLPLLVLNSLLTLIAIYSSDESIQRPRFY--- 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 111 FTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWfTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLE 190
Cdd:PRK06473 110 YSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASS 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 191 FrDLFQIFNHLIyknEVNLFFVTLCALLLfcGSVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARL-LP 268
Cdd:PRK06473 189 F-DYEPLRSHTL---PLSTQLLLLAPILV--GFGIKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRFgVG 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 269 LFI-AIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFL 344
Cdd:PRK06473 262 LFPeAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQMISHGLISALLFL 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 345 GSGsiihsmeaiVGYSPERSQNMVLMGGL---TKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILDDSWLYSPIFAIIA 421
Cdd:PRK06473 342 LVG---------VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLC 412
|
410 420
....*....|....*....|.
gi 192807049 422 CSTAGLTAFYMFRIYLLVFEG 442
Cdd:PRK06473 413 MIGTGLTAVYFLLLVNRVFFG 433
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
176-440 |
1.11e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 96.19 E-value: 1.11e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 176 LLGILGIYWITGSLEFRDLFQIFNHLIYKNEVNLFFVTLCALLLfcgsvaKSAQFPLHVWLPDAM-EGPTPISAlIHAAT 254
Cdd:PRK12665 178 LIGIALVYAATGTLNMADLAVRLDELPSGTRTALFAVLLVAFGI------KAAVFPLSFWLPDSYpTAPAPVTA-VFAGL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 255 MVAAGIFLVARLLPLFIAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFH 331
Cdd:PRK12665 251 LTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYY 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 332 LITHAYSKALLFLGSGSIihsmeaivgyspER---SQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEIL- 407
Cdd:PRK12665 331 VAHHITVQTTLFLVVGLI------------ERqagSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLe 398
|
250 260 270
....*....|....*....|....*....|....*....
gi 192807049 408 ----DDSWLyspIFAIIACS--TAGLTAFYMFRIYLLVF 440
Cdd:PRK12665 399 agaeDGTWL---AWALVAGGvvTSLLTLYAVARVWTKAF 434
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
73-432 |
1.05e-19 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 92.90 E-value: 1.05e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 73 YFIDSLtSIMSILITTVG-ILVLIYSDHYMSH-------DQGYLRFFtYLSFfntSMLGLVT-----SSNLIQVYIFWEL 139
Cdd:PRK08676 59 LFIDHL-GIFVVLIASVVfILAALYARGYVDHllsngelDPENLKVF-YLGF---NLLLSVItfaffSDNLALFWIFAEL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 140 VGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLlGILGIYWIT------GSLEFRDLfqifnhLIYKNEVNLFFVT 213
Cdd:PRK08676 134 TTVFSAMLIAILSARENIDAALKYIFIASTAMIFAFI-GLIFLFSLTrqalgtGTLNWTEL------AAHASLLSPSVLG 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 214 LCALLLFCGSVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF--IAIPSIMSGIALI-GIITVV 289
Cdd:PRK08676 207 ASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGlGIFSIA 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 290 LGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGsIIHSMeaivgYSPERSQN 366
Cdd:PRK08676 286 VAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ-----YRSDRFDR 359
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 192807049 367 mvlMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILDDS-----WLYSPIFAIIACSTAGLTAFYM 432
Cdd:PRK08676 360 ---IFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLggisvWLVLAVLLLLLLAASSFAIFLL 427
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
31-440 |
2.24e-17 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 85.44 E-value: 2.24e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 31 ILLLTIVMIFSIDLSIHQIKNS------------SIYQYVWSWTINNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSD 98
Cdd:CHL00049 21 ILIFGLILLLMIDLTSDQKDIPwlyfisstslvmSITALLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSV 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 99 HYMSHDQGYLRFFtyLSFFNTSMLG---LVTSSNLIQVYIFWELVGMCSYLLIGFwFTRPIAAN-ACQKAFVTNRVGDFG 174
Cdd:CHL00049 101 EYIECTEMAITEF--LLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY-TKKDVRSNeATMKYLLMGGASSSI 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 175 LLLGILGIYWIT-GSLEFRdlfQIFNHLIYKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEG-PTPISALIhA 252
Cdd:CHL00049 178 LVYGFSWLYGLSgGEIELQ---EIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPVVAFL-S 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 253 ATMVAAGIFLVARLLPLFIAIPSIMSGIAL--IGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALF 330
Cdd:CHL00049 254 VTSKVAASALATRIFDIPFYFSSNEWHLLLeiLAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYA 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 331 HLITHAYSKALLFLGSGSIIHSMEAIVGysperSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILDDS 410
Cdd:CHL00049 334 SMITYMLFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCG 408
|
410 420 430
....*....|....*....|....*....|...
gi 192807049 411 W---LYSPIFaiIACSTAGLTAFYMFRIYLLVF 440
Cdd:CHL00049 409 WqagLYFLVS--IGLLTSVISIYYYLKIIKLLM 439
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
73-403 |
4.58e-16 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 81.23 E-value: 4.58e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 73 YFIDSLTSIMSILITTVGILVLIYSdhymSHDQGYLRFFTYLSFFNT-SMLGLVTSSNLIQVYIFWELVGMCSYLLIGFW 151
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLITG----LGEKKSSGLYVFLMLMGLaSVSAIVLADDIFNLYVFFEIAAIVQVGLVIAS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 152 FTRpiaaNACQKAFVTNRVGDFG---LLLGILGIYWITGSLEFRDLfqifNHLIYKNEVNLFFVTLCALLLFcGSVAKSA 228
Cdd:PRK06277 144 GTE----EAYKAALKYMILGNVAgsiLLLGIGFLLASTGTLNITDI----HNALLVNPTSPVIYGGLLLLIF-GLLYGSG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 229 QFPLHVWLPDAMEGPTP-ISALIHA---ATMVAAGIFLVaRLLPLFIAIPSIMSGIALIGIITVVLGATLAIAQKDIKKN 304
Cdd:PRK06277 215 LPPFHTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 305 LAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIihsmeaivgYSPERSQNMVLMGGLTKHAPITK 381
Cdd:PRK06277 294 LAYHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVA 364
|
330 340
....*....|....*....|..
gi 192807049 382 TAFLIGTLSLCGIPPFACFWSK 403
Cdd:PRK06277 365 FMVLCAKLAISGVPPFNGFQSK 386
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
120-422 |
2.34e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 78.15 E-value: 2.34e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 120 SMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIFN 199
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 200 HliyKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLvarllpLFIAIPSIMS 278
Cdd:MTH00196 85 S---GQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFS------ILVSIGLNVN 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 279 GIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSY---RAALFHLITHAYSKALLFLgsgsiihsmeA 355
Cdd:MTH00196 154 ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFesiQASLVYLFIYIIMSICVFS----------I 223
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 192807049 356 IVGYSPERSQnMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILDDSWLYSPIFAIIAC 422
Cdd:MTH00196 224 ILALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLA 289
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
125-442 |
3.05e-15 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 79.10 E-value: 3.05e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 125 VTSSNLIQVYIFWELVGMCSYLLIGfwftrpiaanaCQKA----FVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIFNH 200
Cdd:PRK08042 107 VIASNLGMFVVMAEIMALCAVFLTG-----------NSKEgklwFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQ 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 201 LIYKNEVNLFFVTLCALLlfcgsvakSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVArLLPLFIAIPSIMSGI 280
Cdd:PRK08042 176 LPLGSDIWLLGVIGFGLL--------AGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGIL-TLSLLGGNAPLWWGV 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 281 ALI--GIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMG--------------SYRAALFHLITHAYSKALLFL 344
Cdd:PRK08042 247 ALLvlGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFL 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 345 GSGSIIHSmeaiVGYspersQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEI------LDDSWLY----- 413
Cdd:PRK08042 327 GAGSVWFR----TGH-----RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFvarll 397
|
330 340
....*....|....*....|....*....
gi 192807049 414 SPIFAIIACSTAGLTAFYMFRIYLLVFEG 442
Cdd:PRK08042 398 GPLLAVGLAITGALAVMCMAKVYGVTFLG 426
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
110-442 |
1.14e-14 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 76.99 E-value: 1.14e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 110 FFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFW--FTRPIAANacqKAFVTNRVGDFGLLLGILGIYWITG 187
Cdd:PRK12561 89 FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWggQKRLYAAT---KFILYTALASIFILVAGLALALSGD 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 188 SLEFrDLFQIFNhliykNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFLVarl 266
Cdd:PRK12561 166 TFTF-DLAELGA-----KSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLK--- 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 267 lplfiaipsiMSGIALI---------------------GIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMlaLGMGSY 325
Cdd:PRK12561 230 ----------MGGYALIrfnvqmlpdahvyfapalailGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAF 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 326 RA-----ALFHLITHAYSKALLFLGSGsiihsmeaiVGYspERSQNMVL--MGGLTKHAPITKTAFLIGTLSLCGIPPFA 398
Cdd:PRK12561 298 TDlgisgAMLQMISHGLIAAALFFLTG---------VTY--ERTHTLSIpnMGGLAKVMPKTFALFTASSMASLALPGMS 366
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 192807049 399 CFWSKDEI---LDDSWLYSPIFAIIACSTAG----LTAFYMFRIYLLVFEG 442
Cdd:PRK12561 367 GFVSELTVflgITSSDVYSSTFRTITILLAAvgliLTPIYLLSMLRRVFYG 417
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
81-433 |
1.90e-14 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 76.50 E-value: 1.90e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 81 IMSILITTVGILVLIYSDHYMShdQGYLRFFTYLSFFNTSMLGLVtssNLIQVYIFWELVGMCSYLLIGFWFTRPIAANA 160
Cdd:MTH00226 109 ILTGFIVPCSILISWHSVKYLT--KSFLICMLILEFLLYAVFSVL---DIFMFYILFEGVLIPMYLILGIWGSREEKMQA 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 161 CQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIfNHLIYKNEVNLFFvtlcaLLLFCGSVAKSAQFPLHVWLPDA- 239
Cdd:MTH00226 184 AYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQKWIF-----LGIFLAMAVKIPIFPFHIWLPKAh 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 240 MEGPTPISALIHAATMVAAGIFLVARLLPLF-IAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMML 318
Cdd:MTH00226 258 VEAPVAGSVLLAGILLKLGGYGLVRLSWPILpLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSI 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 319 AL---GMGSYRAALFHLITHAYSKALLFLgsgsiihsmEAIVGYSPERSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIP 395
Cdd:MTH00226 338 TLvthDIIGLTGSIFIMLAHGIVSSLLFI---------LVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVP 408
|
330 340 350
....*....|....*....|....*....|....*...
gi 192807049 396 PFACFWSKDEILDDSWLYSPIFAIIACSTAGLTAFYMF 433
Cdd:MTH00226 409 PSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
119-403 |
3.13e-14 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 75.86 E-value: 3.13e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 119 TSMLG---LVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEfrDLF 195
Cdd:PRK02504 118 TATLGgmfLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGST--QLS 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 196 QIFNHLIykneVNLFFVTLCALLLFCGSVA-KSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLVARLLPLfiAI 273
Cdd:PRK02504 196 AIALALI----TSPSLGLALALVFVIAGIAfKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLLVT--AF 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 274 PSIMSGIALI----GIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITH------AYSKA 340
Cdd:PRK02504 269 PSFDEQWKLLftalAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAYlfmnlgAFACV 348
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 192807049 341 LLF-LGSGSiihsmEAIVGYSpersqnmvlmgGLTKHAPITKTAFLIGTLSLCGIPPFACFWSK 403
Cdd:PRK02504 349 ILFsLRTGT-----DQISDYA-----------GLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
30-407 |
5.30e-14 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 74.67 E-value: 5.30e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 30 SILLLTIVMIFSIDLSIHQIkNSSIYQYVWSWTINNDLSLEFGYFIdsltsIMSILITTVGILVLIYSDHYMSHDQGYLR 109
Cdd:MTH00199 25 STLKLSIGVLLLIGLIVELN-SLNLFQSDKVLDGTNGLLLTNSWII-----ISKIIIIIGSISILLMGSGETILSEGGQS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 110 FFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSL 189
Cdd:MTH00199 99 SPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGET 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 190 EFRDlfqifNHLIYKNEVNLFFVTLCalLLFCGSVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFlvarllP 268
Cdd:MTH00199 179 SIQG-----INSILTGDVGKILITIS--LLFKLSAA-----PFHMWAPDVYEGaPTITTALL--ATVPKIGVF------S 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 269 LFIAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSY---RAALFHLITHayskALLFLG 345
Cdd:MTH00199 239 ILVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFesiQASLIYMIIY----VIMSIC 314
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 192807049 346 SGSIIHSMEAivgyspeRSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEIL 407
Cdd:MTH00199 315 SFSIILSLKL-------TKGLIVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
61-111 |
8.48e-13 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 63.22 E-value: 8.48e-13
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 192807049 61 WTINNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYLRFF 111
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
168-431 |
1.86e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 70.26 E-value: 1.86e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 168 NRVGDFGLLLGILGIYWITGSLEFRDLFQIFNHLIYKNEVnlFFVTLCALLL--FCgsvAKSAQFPLHVWLPDA-MEGPT 244
Cdd:PRK12666 168 NLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAADRA--LLEAGAALLLvvFL---IKAAMWPLNFWLPPAyAAASA 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 245 PISALIhaATMVAAGIFLVARL-LPLFIAIPSIMSGIAL-----IGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMML 318
Cdd:PRK12666 243 PVAALF--AIMTKVGIYAILRLsTLLFGPEAGASAGFGQdwllpGGLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLA 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 319 ALGMGSYR---AALFHLITHAYSKALLFL-----------GSGSIIHSMEAivgYSPERSQNMVLMGGLTKHAPITKTAF 384
Cdd:PRK12666 321 AIGLGNPAataAALYYLVHSTLAAAALFLladlverqrgaAADRLAVTPEL---YDLDEEEEEEVGVAIPATMALLGLLF 397
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 192807049 385 LIGTLSLCGIPPFACFWSKDEILD---------DSWLY------SPIFAIIACSTAGLTAFY 431
Cdd:PRK12666 398 FICALALAGLPPLSGFLGKFALLQallnppgagAAWWLwalvllSGLAALIALTRAGIRLFW 459
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
60-395 |
6.27e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 65.08 E-value: 6.27e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 60 SWTINNDLSLEFGYFIDSLTSI------MSILITTVGILVLIYSDHYMshdqgYLRFFTYLSFFNTSMLGLVTSSNLIQV 133
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVDGVslffilLTTLLIPICILISWKSIKFL-----FKEFLLCLLFLEVLLIGVFSVLDLLLF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 134 YIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIfnhliyknevNLFFVT 213
Cdd:MTH00204 138 YILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNI----------KLPLSI 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 214 LCALLL--FCGSVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMSG-IALIGIITVV 289
Cdd:MTH00204 208 QKWLLVgfFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPlIVMLSVIAVI 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 290 LGATLAIAQKDIKKNLAYSTMSQLGYMMLAL---GMGSYRAALFHLITHAYSKALLFLGSGSIihsmeaivgYSPERSQN 366
Cdd:MTH00204 288 YGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIAVTFL---------YERHHTRL 358
|
330 340
....*....|....*....|....*....
gi 192807049 367 MVLMGGLTKHAPITKTAFLIGTLSLCGIP 395
Cdd:MTH00204 359 IKYYRGLTLTMPLFVIIMLVLSLANMGFP 387
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
226-445 |
9.20e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 61.80 E-value: 9.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 226 KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVArllpLFIAIPSIMSgialIGIITVVLGATLAIAQKDIKKN 304
Cdd:MTH00198 312 KLAAAPFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTS----LVITSKLLLS----VAIISLVVGAFGALNQTRIKRL 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 305 LAYSTMSQLGYMMLALGMGSYRaALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPERSQNMVLMGG------------ 372
Cdd:MTH00198 384 LAYSGIGHIGFILIGVSAGTYE-SLQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGSFGNynlvrrlvdlti 462
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 373 LTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILDDS----WLYS-PIF---AIIACSTAGLTAFYMFRIYLLVfegYF 444
Cdd:MTH00198 463 LSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSikiaFSSSlSIYylvALFAIICTCISAFYYIRIVATI---YF 539
|
.
gi 192807049 445 N 445
Cdd:MTH00198 540 N 540
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
6-452 |
9.22e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 61.49 E-value: 9.22e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 6 ILIGVGLLLFPTATKNLRRMWAFPSILLLTIVMIFSIDLSIHQIKNSSIYQyvwswtinndlsleFGYFIDSLTSIMSIL 85
Cdd:MTH00206 2 ILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSN--------------LYLSYDPLSSPLVIL 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 86 ITTVGILVLIYSDHYMsHDQGYLRFFTYLSFFNTSMLGLV---TSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQ 162
Cdd:MTH00206 68 SCWLLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGY 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 163 KAFVTNRVGDFGLLLGILGIYWITGSLefrdLFQIFNHLIYKNEVNLFFVTLCALLLFCgsvaKSAQFPLHVWLPDA-ME 241
Cdd:MTH00206 147 YFLFYTLIGSLPLLIALLFLQNSLGSL----SLYILYFSKLTTWNNNLWWLACILAFLV----KLPLYGVHLWLPKAhVE 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 242 GPTpisalihAATMVAAGIFL------VARLLPLFIAIPSIMSGIALI-GIITVVLGATLAIAQKDIKKNLAYSTMSQLG 314
Cdd:MTH00206 219 APV-------AGSMVLAGVLLklggygMMRIILILGPSTKLSSYFFIIlGLWGSIMTSSICLRQTDLKSLIAYSSVSHMS 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 315 YMMLALGMG---SYRAALFHLITHAY-SKALLFLGSgsiihsmeaiVGYSPERSQNMVLMGGLTKHAPITKTAFLIGTLS 390
Cdd:MTH00206 292 LVTAGILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQMILPLLSFWWLLFFLA 361
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 192807049 391 LCGIPPFACFWSKDEILDDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGYFNVHFQNFN 452
Cdd:MTH00206 362 NLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLS 423
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
31-343 |
2.58e-09 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 60.14 E-value: 2.58e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 31 ILLLTIVMIFSIDLSIHQ--IKNSSIYQYVWSWTINNDLSLEFgYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYL 108
Cdd:MTH00014 12 LLLPLIKYPWSWALTFSTllLLSLFTLLNLYPMSAPYSMFTES-LSSDMLSAPLITLTLWITALMILASFKIFQNNKAPK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 109 RFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGS 188
Cdd:MTH00014 91 TFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNS 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 189 LEFRdLFQIFNHLIYknevnlfFVTLCALLLFCGSVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL----- 262
Cdd:MTH00014 171 LSML-MSSMEPPSIY-------LMNLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggy 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 263 -VARLLPLF----IAIPSIMSGIALIGIITVVLgatLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLIT 334
Cdd:MTH00014 236 gLLRMSSLFmhinKSLSAPFSSISLVGAVITSL---ICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTswgWQGALAMMIA 312
|
....*....
gi 192807049 335 HAYSKALLF 343
Cdd:MTH00014 313 HGLCSSALF 321
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
80-349 |
4.15e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 59.80 E-value: 4.15e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 80 SIMSILITTVGILVLIYSDHYmSHDQGYLRfftylSFFNTSMLGLV---TSSNLIQVYIFWELVGMCSYLLIGfwftrpI 156
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY-DHYGKWLS-----SLYILTILGMAivlTSDNYLLFLAGWEIMTIPSYVAIA------L 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 157 AANACQKAFVTNRVGDFGLLLGILGIYW---ITGSLEFRDLfqifnhliyKNEVNLFFVTLcalllfcGSVAKSAQFPLH 233
Cdd:PRK06459 115 TKKNKRPAFVFMAFGELSTVLILAGFAWafiISGTTNFSYL---------PSPVPLILASF-------GFIIKMGMMPFL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 234 V--WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMSGIAL--IGIITVVLGATLAIAQKDIKKNLAYST 309
Cdd:PRK06459 179 VseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFGLTIlaIGAFSILFGALYAYVSENVKGLLAFST 258
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 192807049 310 MSQLGYMMLALGM--------GSYR-----AALFHLITHAYSKALLFLGSGSI 349
Cdd:PRK06459 259 IENNGAILVALGLymvtkqliTSIEhfsliTVILYSFAHSVAKTGLFLSSGLQ 311
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
134-442 |
9.49e-09 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 58.56 E-value: 9.49e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 134 YIFWELVGMCSYLLIGFW--FTRPIAANacqKAFVTNRVGDFGLLLGILGIYWITGSLEFRdlfqiFNHLIYKNeVNLFF 211
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWggKKRQYAAT---KFILYTAGSSLFILLAALAMAFYGDTPTFD-----MTALAAKD-FGLGF 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 212 VTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIFLV----------ARLLPlfIAIPSIMSGIA 281
Cdd:PRK02546 212 QLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLKmggyallrmnAGMLP--DAHAQFAPLLI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 282 LIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMlaLGMGSYRA-----ALFHLITHAYSKALLFLgsgsiihsmeaI 356
Cdd:PRK02546 284 VLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLFF-----------L 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 357 VGYSPERSQNMVL--MGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEIL-----DDSwlYSPIFAIIACSTAG--- 426
Cdd:PRK02546 351 VGATYDRTHTLMLdeMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFvgfatSDA--YTLPFRVVVVFLAAvgv 428
|
330
....*....|....*..
gi 192807049 427 -LTAFYMFRIYLLVFEG 442
Cdd:PRK02546 429 iLTPIYLLSMLREIFFG 445
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
35-318 |
4.70e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 55.94 E-value: 4.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 35 TIVMIFSIDLSIHQ---IKNSSIYQYVWSWTInndlSLEFGYFIDSLTSIMSILITTVGILVLIYSDH--------YMSH 103
Cdd:PRK06591 36 RICILSSLLVSIYGysiIQNTELSYTMGGWTS----KIGIEYRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINN 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 104 DQGYLrFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWfTRPIAANACQKAFVTNRVGDFGLLLGILGIY 183
Cdd:PRK06591 112 NRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLL 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 184 WITGSLEFRDLFQIFnhliyKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLV 263
Cdd:PRK06591 190 SITGSLNMTDIAAYL-----QEHTNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYII 264
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 192807049 264 ARLLPLFIAIPSIMSGIA----LIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMML 318
Cdd:PRK06591 265 YKFTYIIIGYETIKTAITnfirPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFL 323
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
208-452 |
1.14e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 54.12 E-value: 1.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 208 NLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIAIPSIMsgiaLIGIIT 287
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLC----VISVLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 288 VVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLIthaYSKALLFLgsgsiihsmeaivgYSPERSQNM 367
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLI---YIVSSGFL--------------FFSLWSGDS 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 368 VLMGGLTKHAPITKTAFLIGT--LSLCGIPPFACFWSKDEILDDSWLYSPIFAIIACSTAGLTA--FYMFRIYLLVFEGY 443
Cdd:MTH00144 218 GSMKDLGSLKPSYKTGLSIISllLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISlfFYLSVFFSSFLSSS 297
|
....*....
gi 192807049 444 FNVHFQNFN 452
Cdd:MTH00144 298 KSKKSNSSK 306
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
81-436 |
5.95e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 52.36 E-value: 5.95e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 81 IMSILITTVGILVLIYSDHYMSHDqgylrFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANA 160
Cdd:MTH00217 87 ILTALLTPICILISWNSIKFLIKE-----FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQA 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 161 CQKAFVTNRVGDFGLLLGILGIYWITGSLEfrdlFQIFNHLIYKNEVNLFFVtlcaLLLFCGSVAKSAQFPLHVWLPDA- 239
Cdd:MTH00217 162 SYYFFFYTFIGSVFMLLGIFTLYSYAGTTD----YQALCCLKIEKELQYFIF----LGFFLSLAIKIPKIPFHIWLPQAh 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 240 MEGPTPISALIHAATMVAAGIFLVARLLPLF-IAIPSIMSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMML 318
Cdd:MTH00217 234 VEAPVAGSVILAGVLLKLGGYGFIRFSWPLLpEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 319 ALgmgsyraaLFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPERSQNMVL--MGGLTKHAPITKTAFLIGTLSLCGIPP 396
Cdd:MTH00217 314 GI--------FSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIkyYRGMVITMPLFGILMLLLVLANASIPL 385
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 192807049 397 FACFWSKDEILDDSWLYSPIFAIIACSTAGLTAFYMFRIY 436
Cdd:MTH00217 386 SCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
231-409 |
2.86e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 49.82 E-value: 2.86e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 231 PLHVWLPDAMEGPTPISALIHAATMVAAGI---FLVARLLPlfiaiPSIMSgiaLIGIITVVLGATLAIAQKDIKKNLAY 307
Cdd:MTH00112 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLtllLMTSNSLN-----PTLLL---TLAILSTLIGGWGGLNQTQLRKIMAF 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 308 STMSQLGYMMLALGMgSYRAALFHLITHAYSKALLFLgsgsIIHSMEaivgysperSQNMVLMGGLTKHAPITKTAFLIG 387
Cdd:MTH00112 182 SSIAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTTS---------TKTLKDMMTSWTKSPTLNTTLMLT 247
|
170 180
....*....|....*....|..
gi 192807049 388 TLSLCGIPPFACFWSKDEILDD 409
Cdd:MTH00112 248 LLSLAGLPPLTGFMPKWLILQE 269
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
122-452 |
3.64e-06 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 49.94 E-value: 3.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 122 LGLVTSSNLIQVYIFWELVGMCSYLLIGFW--FTRPIAANacqKAFVTNRVGDFGLLLGILGIYwITGSLEFRDLFQIFN 199
Cdd:CHL00011 126 IGLFSSRDLLLFFIMWELELIPVYLLLSMWggKKRLYSAT---KFILYTAGGSIFLLIGVLGMG-LYGSNEPTLNFETLA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 200 HLIYKnevnlffVTLCALLLFCGSVA---KSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVA----------R 265
Cdd:CHL00011 202 NQSYP-------VALEILFYIGFLIAyavKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMgayglirinmE 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 266 LLPLFIAIPSimSGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMlaLGMGSY-----RAALFHLITHAYSKA 340
Cdd:CHL00011 268 LLPHAHSIFS--PWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGAILQIISHGFIGA 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 341 LLFLgsgsiihsmeaIVGYSPERSQNMVL--MGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEI---LDDSWLYSP 415
Cdd:CHL00011 344 ALFF-----------LAGTSYDRIRLVYLdeMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVffgIITSQKYLL 412
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 192807049 416 IFAIIACSTAG----LTAFYMFRIYLLVFEGYFNVHFQNFN 452
Cdd:CHL00011 413 MPKILITFVMAigmiLTPIYLLSMLRQMFYGYKLFNVPNSY 453
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
125-435 |
4.85e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 49.20 E-value: 4.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 125 VTSSNLIQVYIFWELVGMCSYLLIGFWFTrPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFqifnhliyk 204
Cdd:MTH00200 21 FSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISEML--------- 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 205 NEVNLFFVTLcALLLfcgsvaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfiAIPSIMsgiALIG 284
Cdd:MTH00200 91 GPLSETLILL-ALAL------KLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPA--LNSNIL---LLLG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 285 IITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLgsgsiihsmeaivgYSPERS 364
Cdd:MTH00200 159 LLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL--------------LNLLNS 224
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 192807049 365 QNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILDDSWLYS-PIFAIIACSTAGLTAFYMFRI 435
Cdd:MTH00200 225 TKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGlFIYATILLLGSLLSLFFYLRL 296
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
108-452 |
6.62e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 49.18 E-value: 6.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 108 LRFFTYLSFFNTSMlglvtssnlIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITG 187
Cdd:MTH00127 103 LQIFLILAFGATEI---------IMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTG 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 188 SLEFRDLfQIFNHLIYKNEVNLFFVTLCaLLLFcgsVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 267
Cdd:MTH00127 174 TLSMLTL-QYSQPLQLSSWADKLWWAGC-LLAF---LVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMM 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 268 PLFIAIPSIMSG----IALIGIItvvLGATLAIAQKDIKKNLAYSTMSQLGYM---MLALGMGSYRAALFHLITHAYSKA 340
Cdd:MTH00127 249 VMLDPLTKELSYpfiiLALWGII---MTGSICLRQTDLKSLIAYSSVSHMGLVaggILIQTPWGFTGALILMIAHGLTSS 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 341 LLFLgsgsiihsmEAIVGYSPERSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILDDSWLYSPIFAII 420
Cdd:MTH00127 326 ALFC---------LANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLAL 396
|
330 340 350
....*....|....*....|....*....|..
gi 192807049 421 ACSTAGLTAFYMFRIYLLVFEGYFNVHFQNFN 452
Cdd:MTH00127 397 TGLGTLITAGYSLYMFLMTQRGPLPDHIIALN 428
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
208-464 |
1.19e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 47.74 E-value: 1.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 208 NLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFI--AIPSIMSGIALIGI 285
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFL---------LATWQKLAPLLIlaFNSSSFMGLLICSV 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 286 ITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPERSQ 365
Cdd:MTH00197 145 LSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 366 NMVLmggltkhapitktaFLIGTLSLCGIPPFACFWSKDEILdDSWLYSPIFAIIACSTAGlTAFYMFRIYLLVFEGYFN 445
Cdd:MTH00197 225 NLVF--------------LGLSFLSLGGLPPLSGFFLKWLIL-TSLLSSNISLITFMLILS-TCFSLYYYLSLAYKSLIL 288
|
250
....*....|....*....
gi 192807049 446 VHFQNFNGKKNSSFYSISL 464
Cdd:MTH00197 289 SNWMINFLMKINLLYSGLF 307
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
74-447 |
1.44e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 47.99 E-value: 1.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 74 FIDSLTSIMSILITTVGILVLIYSDHYMS-----HDQGYLRFFTYLsffNTSMLGLVTSSNLIQVYIFWELVGMCSYLLI 148
Cdd:MTH00068 57 GIDQISSPLLILTCWLLPLMILASQNHLKnepinRQRTYISMLIIL---QLTLILAFSATELILFYIFFEATLIPTLIII 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 149 GFWFTRPIAANACQK-AFVTnRVGDFGLLLGILGIYWITGSLEFrDLFQIFNHLIYKNEVNLFFVTLCaLLLFcgsVAKS 227
Cdd:MTH00068 134 TRWGNQEERLNAGTYfLFYT-LAGSLPLLIALLILQNSLGSLSL-ILLELMSPMQLMTYTNKIWWLAC-LLAF---MVKM 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 228 AQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLF------IAIPSIMsgIALIGIItvvLGATL 294
Cdd:MTH00068 208 PLYGLHLWLPKAhVEAPI-------AGSMILAAVLLklggygILRISILLtplskeLSYPFII--LALWGVL---MTSLI 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 295 AIAQKDIKKNLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAY-SKALLFLgsgsiihsmeAIVGYSPERSQNMVLM 370
Cdd:MTH00068 276 CLRQTDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCL----------ANTNYERTHSRTLLLL 345
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 192807049 371 GGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILDDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGYFNVH 447
Cdd:MTH00068 346 RGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNH 422
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
55-461 |
1.84e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 47.53 E-value: 1.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 55 YQYVWSWTINNDLslefgYFIDSLTSIMSILITTVGILVLIYSdhymshdQGYLRFFTYLSFFNTSMLGLV-------TS 127
Cdd:MTH00150 7 YSSFSSYESLSEL-----FSVDSMSSLLISLSLWISGLMMLAS-------QKSVKLRNKSSSFSLLVLLLClilvlafSV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 128 SNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFrdlfqIFNHLIYKNEV 207
Cdd:MTH00150 75 SSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM-----LLISSLRKLLS 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 208 NLFFVTLCALLLFcgsVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFiaipSIMSGI 280
Cdd:MTH00150 150 SMGLWGLLVFLAF---LVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVF----SLSSSS 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 281 ALIGIITV-----VLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFlgsgsiihs 352
Cdd:MTH00150 216 FSIFLISLslwggVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFCSSGLF--------- 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 353 meAIVGYSPE--RSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPPFACFWSKDEILDDSWLYSPIFAIIACSTAGLTAF 430
Cdd:MTH00150 287 --CLANYTYEkvHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGL 364
|
410 420 430
....*....|....*....|....*....|.
gi 192807049 431 YMFRIYLLVFEGYFNVHFQNFNGKKNSSFYS 461
Cdd:MTH00150 365 YSLYLYTSIQHGGSSSFLKPFNELKSSEMLL 395
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
207-420 |
1.27e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 45.11 E-value: 1.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 207 VNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEgptpiSALIHAATMVAAGIFLVARLLPLFIAipSIMSGIALIGII 286
Cdd:PRK12664 138 QNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYP-----AASNFGIIVLSLFTTKVAALVLLLFF--SGEEILLFLGII 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 287 TVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS-----YRAALFHLITHAYSKALLFLGSGSIIHSMEAIvgysp 361
Cdd:PRK12664 211 TAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVINRTRKF----- 285
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 192807049 362 ersqNMVLMGGLTKhAPITKTAFLIGTLSLCGIPPFACFWSKDEILDDSWLYSPIFAII 420
Cdd:PRK12664 286 ----NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLY 339
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
68-325 |
4.95e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 43.04 E-value: 4.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 68 SLEFGYFIDSLTSIMSILITTVGILVLIYSDHYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLL 147
Cdd:MTH00205 48 FISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLIL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 148 IGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRDLFQIFNHLIYknevnLFFVTLCALLLFcgsVAKS 227
Cdd:MTH00205 128 ILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFY-----LFLYWIFLMLAF---LVKL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 228 AQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFIAIPSIMS----GIALIGiitVVLGATLAI 296
Cdd:MTH00205 200 PMYFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLIRITSMLYKLNSNFSelffSISLWG---GVMTGMICL 269
|
250 260
....*....|....*....|....*....
gi 192807049 297 AQKDIKKNLAYSTMSQLGYMMLALGMGSY 325
Cdd:MTH00205 270 RQVDLKSLIAYSSVGHMGLMVVGVFSNTS 298
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
216-403 |
1.28e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 41.69 E-value: 1.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 216 ALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfiaipSIMSGIALIGIITVVLGATLA 295
Cdd:MTH00011 91 ALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGLGG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 296 IAQKDIKKNLAYSTMSQLGYMMLAlgmgsyraalfhlITHAYSKALLFLGSGSIIHS-MEAIVGYSPERSQNMvlMGGLT 374
Cdd:MTH00011 166 MNQTQLRPLLAYSSIGHMGWMTMI-------------SVFSPSMAILYFMTYIIITTpLMLLFAYLNAFSTKF--NSKIS 230
|
170 180
....*....|....*....|....*....
gi 192807049 375 KHAPITKTAFLIGTLSLCGIPPFACFWSK 403
Cdd:MTH00011 231 SMSQTTSMSLFIMLLSLGGLPPFTGFMPK 259
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
64-396 |
2.07e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 41.03 E-value: 2.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 64 NNDLSLEFG--YFIDSLTSIMSILITTVGILVLIYSDHYMSHDQgYLRFFTYLSFFNTSMLGLV---TSSNLIQVYIFWE 138
Cdd:MTH00110 45 PNDNSLNFSllFFSDSLSTPLLILTTWLLPLMLMASQHHLSKEP-LTRKKLYITMLILLQLFLImtfTATELIMFYILFE 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 139 LVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGIYWITGSLEFRdLFQIFNHLIYKNEVNLFFVTLCaLL 218
Cdd:MTH00110 124 ATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFL-LLQLWAQPLPNSWSNNLLWLAC-MM 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 219 LFcgsVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPL------FIAIPSIMsgIALIGI 285
Cdd:MTH00110 202 AF---MVKMPLYGLHLWLPKAhVEAPI-------AGSMVLAAILLklggygMMRITIIlnplteFMAYPFLM--LSLWGM 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 286 ItvvLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSiihsmeaivGYSPE 362
Cdd:MTH00110 270 I---MTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATALMIAHGLTSSMLFCLANS---------NYERI 337
|
330 340 350
....*....|....*....|....*....|....
gi 192807049 363 RSQNMVLMGGLTKHAPITKTAFLIGTLSLCGIPP 396
Cdd:MTH00110 338 HSRTMILARGLQTLLPLMATWWLLASLTNLALPP 371
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
25-316 |
2.36e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 41.11 E-value: 2.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 25 MWAFPSILLLTIVMIFSIDLSIHQIknsSIYQYVWSWTINNdLSLEFGyfIDSLTSIMSILITTVGILVLIYSDHYMSHD 104
Cdd:MTH00044 15 SWIVPKNKLWPISISQSSLISLLSL---FLLNNHWSSSWHN-LSLSLA--TDSLSSPLIILSCWLAPLSLLASINHLSNN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 105 QGYLR--FFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGI 182
Cdd:MTH00044 89 SPNNQrtFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAI 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192807049 183 YWITGSLEFrdlfqIFNHLIYKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIF 261
Cdd:MTH00044 169 YSSSSSLSI-----PLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS-MILAAILLKLGGY 242
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 192807049 262 LVARLLPLFIAIPSIMSGIALI------GIITVVLgatlAIAQKDIKKNLAYSTMSQLGYM 316
Cdd:MTH00044 243 GLIRLINLFSLPSANNISFILIvfccwgALITSII----CLRQTDLKALIAYSSVGHMSLV 299
|
|
| |
