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Conserved domains on  [gi|76879812|dbj|BAE45743|]
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putative protein product of Nbla10512, partial [Homo sapiens]

Protein Classification

C2H2-type zinc finger protein( domain architecture ID 11472214)

Cys2His2 (C2H2)-type zinc finger protein may be involved in transcriptional regulation

CATH:  3.30.160.60
Gene Ontology:  GO:0008270|GO:0003677
PubMed:  11361095|22803940
SCOP:  4003583

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
176-303 2.71e-08

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 55.09  E-value: 2.71e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 76879812 176 KPYKCVRCGKTFRFGFYLTEHQR--IHTGE--KPYKCKE--CGKAFIRRGNLKEHLKIHSGLKPYDCKEC-------GKS 242
Cdd:COG5048 288 LPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKLLnssskfsPLL 367

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 76879812 243 FSRRGQFTEHQKIHTGVKP--------------------------------YKCKECGKAFSRSVDLRIHQRIHTGEKPY 290
Cdd:COG5048 368 NNEPPQSLQQYKDLKNDKKsetlsnscirnfkrdsnlslhiithlsfrpynCKNPPCSKSFNRHYNLIPHKKIHTNHAPL 447

                       170
                ....*....|...
gi 76879812 291 ECKQCGKAFRLNS 303
Cdd:COG5048 448 LCSILKSFRRDLD 460
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
8-170 1.28e-07

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 53.16  E-value: 1.28e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 76879812   8 KPYECKECGKAFSVCGQLTRHQ--KIHTG--VKPYECKE--CGKTFRLSFYLTEHRRTHAGKKPYECK--ECGKSFNV-- 77
Cdd:COG5048 288 LPIKSKQCNISFSRSSPLTRHLrsVNHSGesLKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKllNSSSKFSPll 367

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 76879812  78 ----RGQLNRHKTIHTgIKPFACKV--CEKAFSYSGDLRVHSRIHTGEKPYECK--ECGKAFMLRSVLTEHQRLHTGVKP 149
Cdd:COG5048 368 nnepPQSLQQYKDLKN-DKKSETLSnsCIRNFKRDSNLSLHIITHLSFRPYNCKnpPCSKSFNRHYNLIPHKKIHTNHAP 446

                       170       180
                ....*....|....*....|.
gi 76879812 150 YECkECGKTFRVRSQISLHKK 170
Cdd:COG5048 447 LLC-SILKSFRRDLDLSNHGK 466
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
288-341 3.85e-05

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 45.07  E-value: 3.85e-05
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 76879812 288 KPYECKQCGKAFRLNSHLTEHQRIHTGEKPYECKV--CRKAFRQYSHLYQHQKTHN 341
Cdd:COG5048  32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHH 87
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
176-303 2.71e-08

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 55.09  E-value: 2.71e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 76879812 176 KPYKCVRCGKTFRFGFYLTEHQR--IHTGE--KPYKCKE--CGKAFIRRGNLKEHLKIHSGLKPYDCKEC-------GKS 242
Cdd:COG5048 288 LPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKLLnssskfsPLL 367

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 76879812 243 FSRRGQFTEHQKIHTGVKP--------------------------------YKCKECGKAFSRSVDLRIHQRIHTGEKPY 290
Cdd:COG5048 368 NNEPPQSLQQYKDLKNDKKsetlsnscirnfkrdsnlslhiithlsfrpynCKNPPCSKSFNRHYNLIPHKKIHTNHAPL 447

                       170
                ....*....|...
gi 76879812 291 ECKQCGKAFRLNS 303
Cdd:COG5048 448 LCSILKSFRRDLD 460
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
8-170 1.28e-07

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 53.16  E-value: 1.28e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 76879812   8 KPYECKECGKAFSVCGQLTRHQ--KIHTG--VKPYECKE--CGKTFRLSFYLTEHRRTHAGKKPYECK--ECGKSFNV-- 77
Cdd:COG5048 288 LPIKSKQCNISFSRSSPLTRHLrsVNHSGesLKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKllNSSSKFSPll 367

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 76879812  78 ----RGQLNRHKTIHTgIKPFACKV--CEKAFSYSGDLRVHSRIHTGEKPYECK--ECGKAFMLRSVLTEHQRLHTGVKP 149
Cdd:COG5048 368 nnepPQSLQQYKDLKN-DKKSETLSnsCIRNFKRDSNLSLHIITHLSFRPYNCKnpPCSKSFNRHYNLIPHKKIHTNHAP 446

                       170       180
                ....*....|....*....|.
gi 76879812 150 YECkECGKTFRVRSQISLHKK 170
Cdd:COG5048 447 LLC-SILKSFRRDLDLSNHGK 466
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
288-341 3.85e-05

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 45.07  E-value: 3.85e-05
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 76879812 288 KPYECKQCGKAFRLNSHLTEHQRIHTGEKPYECKV--CRKAFRQYSHLYQHQKTHN 341
Cdd:COG5048  32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHH 87
zf-H2C2_2 pfam13465
Zinc-finger double domain;
192-217 1.07e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 1.07e-03
                          10        20
                  ....*....|....*....|....*.
gi 76879812   192 YLTEHQRIHTGEKPYKCKECGKAFIR 217
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
108-131 1.76e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 1.76e-03
                          10        20
                  ....*....|....*....|....
gi 76879812   108 DLRVHSRIHTGEKPYECKECGKAF 131
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSF 24
zf-H2C2_2 pfam13465
Zinc-finger double domain;
304-329 2.27e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 2.27e-03
                          10        20
                  ....*....|....*....|....*.
gi 76879812   304 HLTEHQRIHTGEKPYECKVCRKAFRQ 329
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
176-303 2.71e-08

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 55.09  E-value: 2.71e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 76879812 176 KPYKCVRCGKTFRFGFYLTEHQR--IHTGE--KPYKCKE--CGKAFIRRGNLKEHLKIHSGLKPYDCKEC-------GKS 242
Cdd:COG5048 288 LPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKLLnssskfsPLL 367

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 76879812 243 FSRRGQFTEHQKIHTGVKP--------------------------------YKCKECGKAFSRSVDLRIHQRIHTGEKPY 290
Cdd:COG5048 368 NNEPPQSLQQYKDLKNDKKsetlsnscirnfkrdsnlslhiithlsfrpynCKNPPCSKSFNRHYNLIPHKKIHTNHAPL 447

                       170
                ....*....|...
gi 76879812 291 ECKQCGKAFRLNS 303
Cdd:COG5048 448 LCSILKSFRRDLD 460
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
2-341 9.46e-08

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 53.55  E-value: 9.46e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 76879812   2 RIHTGKKPYEC--KECGKAFSVCGQLTRHQKIHTGVKPYECKecgKTFRLSFYLTEHR-RTHAGKKP-YECKECGKSFNv 77
Cdd:COG5048  54 RSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNS---KSLPLSNSKASSSsLSSSSSNSnDNNLLSSHSLP- 129

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 76879812  78 rgQLNRHKTIHTGIKP--FACKVCEKAFSYSGDLRVHSRIHtGEKPYECKeCGKAFMLRSVLTEHQRLHTGVKPYECKEC 155
Cdd:COG5048 130 --PSSRDPQLPDLLSIsnLRNNPLPGNNSSSVNTPQSNSLH-PPLPANSL-SKDPSSNLSLLISSNVSTSIPSSSENSPL 205

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 76879812 156 GKTFRVRSQISLHKKIHtDVKPYKCVRCGKTFRFGFYLTEHQRIHTGEKPYKCKECGkafiRRGNLKEHLKIHSGLKPYd 235
Cdd:COG5048 206 SSSYSIPSSSSDQNLEN-SSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESP----RSSLPTASSQSSSPNESD- 279

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 76879812 236 ckecgkSFSRRGQFTehqkihtgvkPYKCKECGKAFSRSVDLRIHQR--IHTGE--KPYEC--KQCGKAFRLNSHLTEHQ 309
Cdd:COG5048 280 ------SSSEKGFSL----------PIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKRHI 343

                       330       340       350
                ....*....|....*....|....*....|....
gi 76879812 310 RIHTGEKPYECK--VCRKAFRQYSHLYQHQKTHN 341
Cdd:COG5048 344 LLHTSISPAKEKllNSSSKFSPLLNNEPPQSLQQ 377
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
8-170 1.28e-07

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 53.16  E-value: 1.28e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 76879812   8 KPYECKECGKAFSVCGQLTRHQ--KIHTG--VKPYECKE--CGKTFRLSFYLTEHRRTHAGKKPYECK--ECGKSFNV-- 77
Cdd:COG5048 288 LPIKSKQCNISFSRSSPLTRHLrsVNHSGesLKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKllNSSSKFSPll 367

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 76879812  78 ----RGQLNRHKTIHTgIKPFACKV--CEKAFSYSGDLRVHSRIHTGEKPYECK--ECGKAFMLRSVLTEHQRLHTGVKP 149
Cdd:COG5048 368 nnepPQSLQQYKDLKN-DKKSETLSnsCIRNFKRDSNLSLHIITHLSFRPYNCKnpPCSKSFNRHYNLIPHKKIHTNHAP 446

                       170       180
                ....*....|....*....|.
gi 76879812 150 YECkECGKTFRVRSQISLHKK 170
Cdd:COG5048 447 LLC-SILKSFRRDLDLSNHGK 466
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
92-281 2.71e-07

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 52.01  E-value: 2.71e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 76879812  92 KPFACKVCEKAFSYSGDLRVHSR--IHTGE--KPYECKE--CGKAFMLRSVLTEHQRLHTGVKPYECKECGKTFRvrSQI 165
Cdd:COG5048 288 LPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSK--FSP 365

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 76879812 166 SLHKKIHTDVKPYkcvrcgktfrfgfYLTEHQRIHTGEKPykckECGKAFIRRGNLKEHLKIHSGLKPYDCK--ECGKSF 243
Cdd:COG5048 366 LLNNEPPQSLQQY-------------KDLKNDKKSETLSN----SCIRNFKRDSNLSLHIITHLSFRPYNCKnpPCSKSF 428

                       170       180       190
                ....*....|....*....|....*....|....*...
gi 76879812 244 SRRGQFTEHQKIHTGVKPYKCKECGKAFSRSVDLRIHQ 281
Cdd:COG5048 429 NRHYNLIPHKKIHTNHAPLLCSILKSFRRDLDLSNHGK 466
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
36-173 6.08e-07

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 50.85  E-value: 6.08e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 76879812  36 KPYECKECGKTFRLSFYLTEHRRT--HAGK--KPYECKE--CGKSFNVRGQLNRHKTIHTGIKPFACKVCEKAFSYSGDL 109
Cdd:COG5048 288 LPIKSKQCNISFSRSSPLTRHLRSvnHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLL 367

                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 76879812 110 -------RVHSRIHTGEKPYEC--KECGKAFMLRSVLTEHQRLHTGVKPYECK--ECGKTFRVRSQISLHKKIHT 173
Cdd:COG5048 368 nneppqsLQQYKDLKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPYNCKnpPCSKSFNRHYNLIPHKKIHT 442
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
288-341 3.85e-05

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 45.07  E-value: 3.85e-05
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 76879812 288 KPYECKQCGKAFRLNSHLTEHQRIHTGEKPYECKV--CRKAFRQYSHLYQHQKTHN 341
Cdd:COG5048  32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHH 87
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
204-257 3.92e-04

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 41.99  E-value: 3.92e-04
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 76879812 204 KPYKCKECGKAFIRRGNLKEHLKIHSGLKPYDC--KECGKSFSRRGQFTEHQKIHT 257
Cdd:COG5048  32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHH 87
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
260-320 4.13e-04

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 41.99  E-value: 4.13e-04
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 76879812 260 KPYKCKECGKAFSRSVDLRIHQRIHTGEKPYEC--KQCGKAFRLNSHLTEHQRIHTGEKPYEC 320
Cdd:COG5048  32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLN 94
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
166-256 6.41e-04

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 41.22  E-value: 6.41e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 76879812 166 SLHKKIHTDVKPYKCVRCGKTFRFGFYLTEHQRIHTGEKPYKC--KECGKAFIRRGNLKEHLKIHSGLKPYDCKecgKSF 243
Cdd:COG5048  22 STLKSLSNAPRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNS---KSL 98

                        90
                ....*....|...
gi 76879812 244 SRRGQFTEHQKIH 256
Cdd:COG5048  99 PLSNSKASSSSLS 111
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
232-297 9.45e-04

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 40.83  E-value: 9.45e-04
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 76879812 232 KPYDCKECGKSFSRRGQFTEHQKIHTGVKPYKC--KECGKAFSRSVDLRIHQRIHTGEKPYECKQCGK 297
Cdd:COG5048  32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNSKSLP 99
zf-H2C2_2 pfam13465
Zinc-finger double domain;
192-217 1.07e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 1.07e-03
                          10        20
                  ....*....|....*....|....*.
gi 76879812   192 YLTEHQRIHTGEKPYKCKECGKAFIR 217
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
108-131 1.76e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 1.76e-03
                          10        20
                  ....*....|....*....|....
gi 76879812   108 DLRVHSRIHTGEKPYECKECGKAF 131
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSF 24
zf-H2C2_2 pfam13465
Zinc-finger double domain;
304-329 2.27e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 2.27e-03
                          10        20
                  ....*....|....*....|....*.
gi 76879812   304 HLTEHQRIHTGEKPYECKVCRKAFRQ 329
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
276-299 2.33e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 2.33e-03
                          10        20
                  ....*....|....*....|....
gi 76879812   276 DLRIHQRIHTGEKPYECKQCGKAF 299
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSF 24
zf-H2C2_2 pfam13465
Zinc-finger double domain;
220-245 5.33e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 33.88  E-value: 5.33e-03
                          10        20
                  ....*....|....*....|....*.
gi 76879812   220 NLKEHLKIHSGLKPYDCKECGKSFSR 245
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
25-47 6.61e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 33.88  E-value: 6.61e-03
                          10        20
                  ....*....|....*....|...
gi 76879812    25 LTRHQKIHTGVKPYECKECGKTF 47
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSF 24
zf-H2C2_2 pfam13465
Zinc-finger double domain;
251-273 9.89e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 33.11  E-value: 9.89e-03
                          10        20
                  ....*....|....*....|...
gi 76879812   251 EHQKIHTGVKPYKCKECGKAFSR 273
Cdd:pfam13465   4 RHMRTHTGEKPYKCPECGKSFKS 26
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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