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Conserved domains on  [gi|1527180863|gb|AZI22548|]
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ketoacyl-ACP synthase III [Chryseobacterium taklimakanense]

Protein Classification

3-oxoacyl-ACP synthase III family protein( domain architecture ID 11417379)

3-oxoacyl-ACP synthase III family protein such as Pseudomonas aeruginosa 2-heptyl-4(1H)-quinolone synthase subunits PqsB and PqsC, which form a complex that catalyzes the condensation of 2-aminobenzoylacetate (2-ABA) and octanoyl-CoA to form 2-heptyl-4(1H)-quinolone

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FabH COG0332
3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl- ...
2-354 2.20e-105

3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl-[acyl-carrier-protein] synthase III is part of the Pathway/BioSystem: Fatty acid biosynthesis


:

Pssm-ID: 440101 [Multi-domain]  Cd Length: 323  Bit Score: 312.04  E-value: 2.20e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863   2 PNTIIIGSGSYLPERVIERNHFSDsvfyddnfvKIDKPnDEIIqkfVEITEIENRRYVDDDLVNSDIGAKAAQIALDDAG 81
Cdd:COG0332     1 RNVRILGTGSYLPERVVTNDDLEK---------RLDTS-DEWI---EERTGIRERRIAAPDETTSDLAVEAARKALEAAG 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  82 INKESLDYIISATNFGDVdlhgqqsFMPSLSAIIKNKLGIKNpkCINYDMIFGCPGWVEGMVLADTLIKSGKAKNILVVG 161
Cdd:COG0332    68 IDPEDIDLIIVATVTPDY-------LFPSTACLVQHKLGAKN--AAAFDINAACSGFVYALSVAAALIRSGQAKNVLVVG 138
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 162 SETLSRVTDPYDRN-KMIFADGAGAVVVTATEEENvGIIAHNTLCF-NGDELAYLENSHSLNP--EADQTKKYIRMRGRK 237
Cdd:COG0332   139 AETLSRIVDWTDRStCVLFGDGAGAVVLEASEEGP-GILGSVLGSDgSGADLLVVPAGGSRNPpsPVDEGDHYLRMDGRE 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 238 IYEFALKYVPDAMKQTIDSAGLTLDDIDKILLHQANAKMDHAMISRLfKLygkssyEHAVSPMTIQEFGNSSVATVP-TM 316
Cdd:COG0332   218 VFKFAVRNLPEVIREALEKAGLTLDDIDWFIPHQANLRIIEAVAKRL-GL------PEEKVVVNIDRYGNTSAASIPlAL 290
                         330       340       350
                  ....*....|....*....|....*....|....*...
gi 1527180863 317 YDLIKKGKmeghsFKDNSYILFASVGAGMNINAIVYKF 354
Cdd:COG0332   291 DEALREGR-----IKPGDLVLLAGFGAGLTWGAAVLRW 323
 
Name Accession Description Interval E-value
FabH COG0332
3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl- ...
2-354 2.20e-105

3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl-[acyl-carrier-protein] synthase III is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440101 [Multi-domain]  Cd Length: 323  Bit Score: 312.04  E-value: 2.20e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863   2 PNTIIIGSGSYLPERVIERNHFSDsvfyddnfvKIDKPnDEIIqkfVEITEIENRRYVDDDLVNSDIGAKAAQIALDDAG 81
Cdd:COG0332     1 RNVRILGTGSYLPERVVTNDDLEK---------RLDTS-DEWI---EERTGIRERRIAAPDETTSDLAVEAARKALEAAG 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  82 INKESLDYIISATNFGDVdlhgqqsFMPSLSAIIKNKLGIKNpkCINYDMIFGCPGWVEGMVLADTLIKSGKAKNILVVG 161
Cdd:COG0332    68 IDPEDIDLIIVATVTPDY-------LFPSTACLVQHKLGAKN--AAAFDINAACSGFVYALSVAAALIRSGQAKNVLVVG 138
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 162 SETLSRVTDPYDRN-KMIFADGAGAVVVTATEEENvGIIAHNTLCF-NGDELAYLENSHSLNP--EADQTKKYIRMRGRK 237
Cdd:COG0332   139 AETLSRIVDWTDRStCVLFGDGAGAVVLEASEEGP-GILGSVLGSDgSGADLLVVPAGGSRNPpsPVDEGDHYLRMDGRE 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 238 IYEFALKYVPDAMKQTIDSAGLTLDDIDKILLHQANAKMDHAMISRLfKLygkssyEHAVSPMTIQEFGNSSVATVP-TM 316
Cdd:COG0332   218 VFKFAVRNLPEVIREALEKAGLTLDDIDWFIPHQANLRIIEAVAKRL-GL------PEEKVVVNIDRYGNTSAASIPlAL 290
                         330       340       350
                  ....*....|....*....|....*....|....*...
gi 1527180863 317 YDLIKKGKmeghsFKDNSYILFASVGAGMNINAIVYKF 354
Cdd:COG0332   291 DEALREGR-----IKPGDLVLLAGFGAGLTWGAAVLRW 323
KAS_III cd00830
Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty ...
3-352 6.84e-86

Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.


Pssm-ID: 238426 [Multi-domain]  Cd Length: 320  Bit Score: 262.09  E-value: 6.84e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863   3 NTIIIGSGSYLPERVIERNHFSDSVFYDDNFVkidkpndeiiqkfVEITEIENRRYVDDDLVNSDIGAKAAQIALDDAGI 82
Cdd:cd00830     1 NARILGIGSYLPERVVTNDELEKRLDTSDEWI-------------RTRTGIRERRIADPGETTSDLAVEAAKKALEDAGI 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  83 NKESLDYIISATNFGDvdlhgqqSFMPSLSAIIKNKLGIKNpkCINYDMIFGCPGWVEGMVLADTLIKSGKAKNILVVGS 162
Cdd:cd00830    68 DADDIDLIIVATSTPD-------YLFPATACLVQARLGAKN--AAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGA 138
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 163 ETLSRVTDPYDRN-KMIFADGAGAVVVTATEEENvGIIAHNTLCF-NGDELAYLENSHSLNP--EADQTKKYIRMRGRKI 238
Cdd:cd00830   139 ETLSRILDWTDRStAVLFGDGAGAVVLEATEEDP-GILDSVLGSDgSGADLLTIPAGGSRSPfeDAEGGDPYLVMDGREV 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 239 YEFALKYVPDAMKQTIDSAGLTLDDIDKILLHQANAKMDHAMISRLfKLygkssyEHAVSPMTIQEFGNSSVATVP-TMY 317
Cdd:cd00830   218 FKFAVRLMPESIEEALEKAGLTPDDIDWFVPHQANLRIIEAVAKRL-GL------PEEKVVVNLDRYGNTSAASIPlALD 290
                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1527180863 318 DLIKKGKmeghsFKDNSYILFASVGAGMNINAIVY 352
Cdd:cd00830   291 EAIEEGK-----LKKGDLVLLLGFGAGLTWGAALL 320
PRK09352 PRK09352
beta-ketoacyl-ACP synthase 3;
1-355 1.11e-74

beta-ketoacyl-ACP synthase 3;


Pssm-ID: 236475 [Multi-domain]  Cd Length: 319  Bit Score: 233.43  E-value: 1.11e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863   1 MPNTIIIGSGSYLPERVIErNhfsdsvfydDNFVKIDKPNDEIIqkfVEITEIENRRYVDDDLVNSDIGAKAAQIALDDA 80
Cdd:PRK09352    1 MMYAKILGTGSYLPERVVT-N---------DDLEKMVDTSDEWI---VTRTGIKERRIAAPDETTSDLATEAAKKALEAA 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  81 GINKESLDYIISATNFGDvdlhgqqSFMPSLSAIIKNKLGIKNpkCINYDMIFGCPGWVEGMVLADTLIKSGKAKNILVV 160
Cdd:PRK09352   68 GIDPEDIDLIIVATTTPD-------YAFPSTACLVQARLGAKN--AAAFDLSAACSGFVYALSTADQFIRSGAYKNVLVI 138
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 161 GSETLSRVTDPYDRNK-MIFADGAGAVVVTATEEEnvGIIAhnTLCF---NGDELAYLENSHSLNPEadqTKKYIRMRGR 236
Cdd:PRK09352  139 GAEKLSRIVDWTDRSTcVLFGDGAGAVVLGASEEP--GILS--THLGsdgSYGDLLYLPGGGSRGPA---SPGYLRMEGR 211
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 237 KIYEFALKYVPDAMKQTIDSAGLTLDDIDKILLHQANAKMDHAMISRLfKLygkssyEHAVSPMTIQEFGNSSVATVPT- 315
Cdd:PRK09352  212 EVFKFAVRELAKVAREALEAAGLTPEDIDWLVPHQANLRIIDATAKKL-GL------PMEKVVVTVDKYGNTSAASIPLa 284
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1527180863 316 MYDLIKKGKmeghsFKDNSYILFASVGAGMNINAIVYKFP 355
Cdd:PRK09352  285 LDEAVRDGR-----IKRGDLVLLEGFGGGLTWGAALVRWP 319
ACP_syn_III pfam08545
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; This domain is found on 3-Oxoacyl- ...
129-200 3.89e-25

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.180, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.


Pssm-ID: 430064 [Multi-domain]  Cd Length: 80  Bit Score: 96.82  E-value: 3.89e-25
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1527180863 129 YDMIFGCPGWVEGMVLADTLIKSGKAKNILVVGSETLSRVTDPYDRNKMI-FADGAGAVVVTATEEENVGIIA 200
Cdd:pfam08545   1 FDINAACSGFVYALSTAAALIRSGRAKNVLVIGAETLSKILDWTDRSTAVlFGDGAGAVVLEATDEPGARILD 73
 
Name Accession Description Interval E-value
FabH COG0332
3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl- ...
2-354 2.20e-105

3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl-[acyl-carrier-protein] synthase III is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440101 [Multi-domain]  Cd Length: 323  Bit Score: 312.04  E-value: 2.20e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863   2 PNTIIIGSGSYLPERVIERNHFSDsvfyddnfvKIDKPnDEIIqkfVEITEIENRRYVDDDLVNSDIGAKAAQIALDDAG 81
Cdd:COG0332     1 RNVRILGTGSYLPERVVTNDDLEK---------RLDTS-DEWI---EERTGIRERRIAAPDETTSDLAVEAARKALEAAG 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  82 INKESLDYIISATNFGDVdlhgqqsFMPSLSAIIKNKLGIKNpkCINYDMIFGCPGWVEGMVLADTLIKSGKAKNILVVG 161
Cdd:COG0332    68 IDPEDIDLIIVATVTPDY-------LFPSTACLVQHKLGAKN--AAAFDINAACSGFVYALSVAAALIRSGQAKNVLVVG 138
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 162 SETLSRVTDPYDRN-KMIFADGAGAVVVTATEEENvGIIAHNTLCF-NGDELAYLENSHSLNP--EADQTKKYIRMRGRK 237
Cdd:COG0332   139 AETLSRIVDWTDRStCVLFGDGAGAVVLEASEEGP-GILGSVLGSDgSGADLLVVPAGGSRNPpsPVDEGDHYLRMDGRE 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 238 IYEFALKYVPDAMKQTIDSAGLTLDDIDKILLHQANAKMDHAMISRLfKLygkssyEHAVSPMTIQEFGNSSVATVP-TM 316
Cdd:COG0332   218 VFKFAVRNLPEVIREALEKAGLTLDDIDWFIPHQANLRIIEAVAKRL-GL------PEEKVVVNIDRYGNTSAASIPlAL 290
                         330       340       350
                  ....*....|....*....|....*....|....*...
gi 1527180863 317 YDLIKKGKmeghsFKDNSYILFASVGAGMNINAIVYKF 354
Cdd:COG0332   291 DEALREGR-----IKPGDLVLLAGFGAGLTWGAAVLRW 323
KAS_III cd00830
Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty ...
3-352 6.84e-86

Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.


Pssm-ID: 238426 [Multi-domain]  Cd Length: 320  Bit Score: 262.09  E-value: 6.84e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863   3 NTIIIGSGSYLPERVIERNHFSDSVFYDDNFVkidkpndeiiqkfVEITEIENRRYVDDDLVNSDIGAKAAQIALDDAGI 82
Cdd:cd00830     1 NARILGIGSYLPERVVTNDELEKRLDTSDEWI-------------RTRTGIRERRIADPGETTSDLAVEAAKKALEDAGI 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  83 NKESLDYIISATNFGDvdlhgqqSFMPSLSAIIKNKLGIKNpkCINYDMIFGCPGWVEGMVLADTLIKSGKAKNILVVGS 162
Cdd:cd00830    68 DADDIDLIIVATSTPD-------YLFPATACLVQARLGAKN--AAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGA 138
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 163 ETLSRVTDPYDRN-KMIFADGAGAVVVTATEEENvGIIAHNTLCF-NGDELAYLENSHSLNP--EADQTKKYIRMRGRKI 238
Cdd:cd00830   139 ETLSRILDWTDRStAVLFGDGAGAVVLEATEEDP-GILDSVLGSDgSGADLLTIPAGGSRSPfeDAEGGDPYLVMDGREV 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 239 YEFALKYVPDAMKQTIDSAGLTLDDIDKILLHQANAKMDHAMISRLfKLygkssyEHAVSPMTIQEFGNSSVATVP-TMY 317
Cdd:cd00830   218 FKFAVRLMPESIEEALEKAGLTPDDIDWFVPHQANLRIIEAVAKRL-GL------PEEKVVVNLDRYGNTSAASIPlALD 290
                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1527180863 318 DLIKKGKmeghsFKDNSYILFASVGAGMNINAIVY 352
Cdd:cd00830   291 EAIEEGK-----LKKGDLVLLLGFGAGLTWGAALL 320
PRK09352 PRK09352
beta-ketoacyl-ACP synthase 3;
1-355 1.11e-74

beta-ketoacyl-ACP synthase 3;


Pssm-ID: 236475 [Multi-domain]  Cd Length: 319  Bit Score: 233.43  E-value: 1.11e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863   1 MPNTIIIGSGSYLPERVIErNhfsdsvfydDNFVKIDKPNDEIIqkfVEITEIENRRYVDDDLVNSDIGAKAAQIALDDA 80
Cdd:PRK09352    1 MMYAKILGTGSYLPERVVT-N---------DDLEKMVDTSDEWI---VTRTGIKERRIAAPDETTSDLATEAAKKALEAA 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  81 GINKESLDYIISATNFGDvdlhgqqSFMPSLSAIIKNKLGIKNpkCINYDMIFGCPGWVEGMVLADTLIKSGKAKNILVV 160
Cdd:PRK09352   68 GIDPEDIDLIIVATTTPD-------YAFPSTACLVQARLGAKN--AAAFDLSAACSGFVYALSTADQFIRSGAYKNVLVI 138
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 161 GSETLSRVTDPYDRNK-MIFADGAGAVVVTATEEEnvGIIAhnTLCF---NGDELAYLENSHSLNPEadqTKKYIRMRGR 236
Cdd:PRK09352  139 GAEKLSRIVDWTDRSTcVLFGDGAGAVVLGASEEP--GILS--THLGsdgSYGDLLYLPGGGSRGPA---SPGYLRMEGR 211
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 237 KIYEFALKYVPDAMKQTIDSAGLTLDDIDKILLHQANAKMDHAMISRLfKLygkssyEHAVSPMTIQEFGNSSVATVPT- 315
Cdd:PRK09352  212 EVFKFAVRELAKVAREALEAAGLTPEDIDWLVPHQANLRIIDATAKKL-GL------PMEKVVVTVDKYGNTSAASIPLa 284
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1527180863 316 MYDLIKKGKmeghsFKDNSYILFASVGAGMNINAIVYKFP 355
Cdd:PRK09352  285 LDEAVRDGR-----IKRGDLVLLEGFGGGLTWGAALVRWP 319
PRK12879 PRK12879
3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
1-355 2.26e-70

3-oxoacyl-(acyl carrier protein) synthase III; Reviewed


Pssm-ID: 237245 [Multi-domain]  Cd Length: 325  Bit Score: 222.82  E-value: 2.26e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863   1 MPNTIIIGSGSYLPERVIErnhfsdsvfyDDNFVKIDKPNDEIIqkfVEITEIENRRYVDDDLVNSDIGAKAAQIALDDA 80
Cdd:PRK12879    2 MSYARITGIGTYVPPRVLT----------NDDLETFIDTSDEWI---VQRTGIKERRIAHVEEYTSDLAIKAAERALARA 68
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  81 GINKESLDYIISATNFGDvdlhgqqSFMPSLSAIIKNKLGIKNPKCinYDMIFGCPGWVEGMVLADTLIKSGKAKNILVV 160
Cdd:PRK12879   69 GLDAEDIDLIIVATTTPD-------YLFPSTASQVQARLGIPNAAA--FDINAACAGFLYGLETANGLITSGLYKKVLVI 139
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 161 GSETLSRVTDPYDRNKMI-FADGAGAVVVTATEEEnVGIIAHNTLCF-NGDELAYLEN-SHSLNPEADQTKKYIRMRGRK 237
Cdd:PRK12879  140 GAERLSKVTDYTDRTTCIlFGDGAGAVVLEATENE-PGFIDYVLGTDgDGGDILYRTGlGTTMDRDALSGDGYIVQNGRE 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 238 IYEFALKYVPDAMKQTIDSAGLTLDDIDKILLHQANAKMDHAMISRLfklygksSYEHAVSPMTIQEFGNSSVATVP-TM 316
Cdd:PRK12879  219 VFKWAVRTMPKGARQVLEKAGLTKDDIDWVIPHQANLRIIESLCEKL-------GIPMEKTLVSVEYYGNTSAATIPlAL 291
                         330       340       350
                  ....*....|....*....|....*....|....*....
gi 1527180863 317 YDLIKKGKMeghsfKDNSYILFASVGAGMNINAIVYKFP 355
Cdd:PRK12879  292 DLALEQGKI-----KPGDTLLLYGFGAGLTWAALLVKWG 325
PRK05963 PRK05963
beta-ketoacyl-ACP synthase III;
6-354 6.97e-47

beta-ketoacyl-ACP synthase III;


Pssm-ID: 180328 [Multi-domain]  Cd Length: 326  Bit Score: 161.81  E-value: 6.97e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863   6 IIGSGSYLPERVIErnhfsdsvfyddnfvkidkpNDEIIQKF-------VEITEIENRRYVDDDLVNSDIGAKAAQIALD 78
Cdd:PRK05963    6 IAGFGHAVPDRRVE--------------------NAEIEAQLgletgwiERRTGIRCRRWAAPDETLSDLAASAGDMALS 65
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  79 DAGINKESLDYIISATNFGDvdlHgqqsFMPSLSAIIKNKLGIKNPKCInyDMIFGCPGWVEGMVLADTLIKS-GKAknI 157
Cdd:PRK05963   66 DAGIERSDIALTLLATSTPD---H----LLPPSAPLLAHRLGLQNSGAI--DLAGACAGFLYALVLADGFVRAqGKP--V 134
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 158 LVVGSETLSRVTDPYDRNK-MIFADGAGAVVVTATEEENVGIIAhntLCFNGD----ELAYLENSHSLNP---EADQTKK 229
Cdd:PRK05963  135 LVVAANILSRRINMAERASaVLFADAAGAVVLAPSAKANSGVLG---SQLISDgshyDLIKIPAGGSARPfapERDASEF 211
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 230 YIRMR-GRKIYEFALKYVPDAMKQTIDSAGLTLDDIDKILLHQANAKMDHAMISRLfklygKSSYEHAVSpmTIQEFGNS 308
Cdd:PRK05963  212 LMTMQdGRAVFTEAVRMMSGASQNVLASAAMTPQDIDRFFPHQANARIVDKVCETI-----GIPRAKAAS--TLETYGNS 284
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1527180863 309 SVATVPTMYDLIKKgkmeGHSFKDNSYILFASVGAGMNINAIVYKF 354
Cdd:PRK05963  285 SAATIPLSLSLANL----EQPLREGERLLFAAAGAGMTGGAVVMRV 326
PLN02326 PLN02326
3-oxoacyl-[acyl-carrier-protein] synthase III
6-345 1.66e-45

3-oxoacyl-[acyl-carrier-protein] synthase III


Pssm-ID: 215185  Cd Length: 379  Bit Score: 159.52  E-value: 1.66e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863   6 IIGSGSYLPERVIErnhfsdsvfyDDNFVKIDKPNDEIIqkfVEITEIENRRYVDDDLVNSDIGAKAAQIALDDAGINKE 85
Cdd:PLN02326   50 LVGCGSAVPKLLIT----------NDDLSKLVDTSDEWI---ATRTGIRNRRVLSGDETLTSLAVEAAKKALEMAGVDPE 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  86 SLDYIISATNFGDvDLHGQqsfmpslSAIIKNKLGIKNPkcINYDMIFGCPGWVEGMVLADTLIKSGKAKNILVVGSETL 165
Cdd:PLN02326  117 DVDLVLLCTSSPD-DLFGS-------APQVQAALGCTNA--LAFDLTAACSGFVLGLVTAARFIRGGGYKNVLVIGADAL 186
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 166 SRVTDPYDRNKMI-FADGAGAVVVTATEEENVGIIA-----------HNTLCFNGDELAylENSHSLNPEADQTKKY--- 230
Cdd:PLN02326  187 SRYVDWTDRGTCIlFGDGAGAVVLQACDDDEDGLLGfdmhsdgnghkHLHATFKGEDDD--SSGGNTNGVGDFPPKKasy 264
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 231 --IRMRGRKIYEFALKYVPDAMKQTIDSAGLTLDDIDKILLHQANAKMDHAMISRLfklygKSSYEHAVSpmTIQEFGNS 308
Cdd:PLN02326  265 scIQMNGKEVFKFAVRCVPQVIESALQKAGLTAESIDWLLLHQANQRIIDAVAQRL-----GIPPEKVIS--NLANYGNT 337
                         330       340       350
                  ....*....|....*....|....*....|....*...
gi 1527180863 309 SVATVPTMYD-LIKKGKMeghsfKDNSYILFASVGAGM 345
Cdd:PLN02326  338 SAASIPLALDeAVRSGKV-----KKGDVIATAGFGAGL 370
fabH CHL00203
3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
6-354 5.56e-39

3-oxoacyl-acyl-carrier-protein synthase 3; Provisional


Pssm-ID: 164577 [Multi-domain]  Cd Length: 326  Bit Score: 141.24  E-value: 5.56e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863   6 IIGSGSYLPERVIERNHFSDSVFYDDNFVkidkpndeiiqkfVEITEIENRRYVDDDLVNSDIGAKAAQIALDDAGINKE 85
Cdd:CHL00203    5 ILSTGSSVPNFSVENQQFEDIIETSDHWI-------------STRTGIKKRHLAPSSTSLTKLAAEAANKALDKAHMDPL 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  86 SLDYIISATNFGDvDLHGQQSfmpslsaIIKNKLGIKNPkcINYDMIFGCPGWVEGMVLADTLIKSGKAKNILVVGSETL 165
Cdd:CHL00203   72 EIDLIILATSTPD-DLFGSAS-------QLQAEIGATRA--VAFDITAACSGFILALVTATQFIQNGSYKNILVVGADTL 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 166 SRVTDPYDRNKMI-FADGAGAVVVTATEEENvgiIAHNTLCFNGDELAYLE--NSHSLNPEADQTK------KYIRMRGR 236
Cdd:CHL00203  142 SKWIDWSDRKTCIlFGDGAGAAIIGASYENS---ILGFKLCTDGKLNSHLQlmNKPVNNQSFGTTKlpqgqyQSISMNGK 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 237 KIYEFALKYVPDAMKQTIDSAGLTLDDIDKILLHQANAKMDHAMISRLfklygksSYEHAVSPMTIQEFGNSSVATVPTM 316
Cdd:CHL00203  219 EVYKFAVFQVPAVIIKCLNALNISIDEVDWFILHQANKRILEAIANRL-------SVPNSKMITNLEKYGNTSAASIPLA 291
                         330       340       350
                  ....*....|....*....|....*....|....*....
gi 1527180863 317 YD-LIKKGKMEghsfkDNSYILFASVGAGMNINAIVYKF 354
Cdd:CHL00203  292 LDeAIQNNKIQ-----PGQIIVLSGFGAGLTWGAIVLKW 325
init_cond_enzymes cd00827
"initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, ...
6-344 2.66e-30

"initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.


Pssm-ID: 238423 [Multi-domain]  Cd Length: 324  Bit Score: 117.92  E-value: 2.66e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863   6 IIGSGSYLPERVIErnhfsdsvfyddnfvkidkpNDEIIQKFVEI-----TEIENRRYVDDDLVNSDIGAKAAQIALDDA 80
Cdd:cd00827     4 IEAIGAYLPRYRVD--------------------NEELAEGLGVDpgkytTGIGQRHMAGDDEDVPTMAVEAARRALERA 63
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  81 GINKESLDYIISATNfgdvdlhGQQSFMPSLSAIIKNKLGIKNpkCINYDMIFGCPGWVEGMVLADTLIKSGKAKNILVV 160
Cdd:cd00827    64 GIDPDDIGLLIVATE-------SPIDKGKSAATYLAELLGLTN--AEAFDLKQACYGGTAALQLAANLVESGPWRYALVV 134
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 161 GSETLSRVTDPYDRNKMIFADGAGAVVVTATEE----ENVGIIAHNTLCFNGDELAYLENSHSLNPEADQTKKYIR-MRG 235
Cdd:cd00827   135 ASDIASYLLDEGSALEPTLGDGAAAMLVSRNPGilaaGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAePAG 214
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 236 RKIYEFALKYVPDAMKQTIDSAGLTlDDIDKILLHQANAKMDHAMISRlfKLYGKSSYEHAVSPMTIQEFGNSSVATVPT 315
Cdd:cd00827   215 RAVFEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNGKKILEAVAK--KLGGPPEKASQTRWILLRRVGNMYAASILL 291
                         330       340       350
                  ....*....|....*....|....*....|
gi 1527180863 316 MYD-LIKKGKmeghsFKDNSYILFASVGAG 344
Cdd:cd00827   292 GLAsLLESGK-----LKAGDRVLLFSYGSG 316
PRK07204 PRK07204
beta-ketoacyl-ACP synthase III;
1-354 5.56e-28

beta-ketoacyl-ACP synthase III;


Pssm-ID: 235964  Cd Length: 329  Bit Score: 111.47  E-value: 5.56e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863   1 MPNTIIIGSGSYLPERViernhfsdsVFYDDNFVKIDKPNDEIIQKfveiTEIENRRYVDDDlVNSDIGAKAAQIALDDA 80
Cdd:PRK07204    2 KRYISIKGIGTYLPKRK---------VDSLELDKKLDLPEGWVLKK----SGVKTRHFVDGE-TSSYMGAEAAKKAVEDA 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  81 GINKESLDYIISATNFGdvdlhgQQSfMPSLSAIIKNKLGIKNPKCINYDMIFGCPGWVEGMVLADTLIKSGKAKNILVV 160
Cdd:PRK07204   68 KLTLDDIDCIICASGTI------QQA-IPCTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISYAIECGRYKRVLII 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 161 GSETLSRVTDPYDRNK-MIFADGAGAVVVTATEEENVGIIAHNTLCFNGDELAYLENSHSL-NPEADQTKKY----IRMR 234
Cdd:PRK07204  141 SSEISSVGLNWGQNEScILFGDGAAAVVITKGDHSSRILASHMETYSSGAHLSEIRGGGTMiHPREYSEERKedflFDMN 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 235 GRKIYEFALKYVPDAMKQTIDSAGLTLDDIDKILLHQANAKMDHAMISRLfklygKSSYEHAVSPMTiqEFGNSSVATVP 314
Cdd:PRK07204  221 GRAIFKLSSKYLMKFIDKLLMDAGYTLADIDLIVPHQASGPAMRLIRKKL-----GVDEERFVTIFE--DHGNMIAASIP 293
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1527180863 315 T-MYDLIKKGKMEghsfkDNSYILFASVGAGMNINAIVYKF 354
Cdd:PRK07204  294 VaLFEAIKQKKVQ-----RGNKILLLGTSAGLSIGGILLEY 329
ACP_syn_III pfam08545
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; This domain is found on 3-Oxoacyl- ...
129-200 3.89e-25

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.180, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.


Pssm-ID: 430064 [Multi-domain]  Cd Length: 80  Bit Score: 96.82  E-value: 3.89e-25
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1527180863 129 YDMIFGCPGWVEGMVLADTLIKSGKAKNILVVGSETLSRVTDPYDRNKMI-FADGAGAVVVTATEEENVGIIA 200
Cdd:pfam08545   1 FDINAACSGFVYALSTAAALIRSGRAKNVLVIGAETLSKILDWTDRSTAVlFGDGAGAVVLEATDEPGARILD 73
PRK12880 PRK12880
beta-ketoacyl-ACP synthase III;
30-354 6.00e-21

beta-ketoacyl-ACP synthase III;


Pssm-ID: 171793  Cd Length: 353  Bit Score: 92.34  E-value: 6.00e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  30 DDNFVKIDKPNDEIIQKFVEITEIENRRYVDDDLVNSDIGAKAAQIALDDAGINKESLDYIISATNFGDVdlhgqqsFMP 109
Cdd:PRK12880   25 DDELESVFSNDIKTLKRMKKVIGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDF-------FMP 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 110 SLSAIIKNKLGIKnPKCINYDMIFGCPGWVEGMVLADTLIKSGKAKNILVVGsETLSRVTDPYDRN-KMIFADGAGAVVV 188
Cdd:PRK12880   98 STACYLHQLLNLS-SKTIAFDLGQACAGYLYGLFVAHSLIQSGLGKILLICG-DTLSKFIHPKNMNlAPIFGDGVSATLI 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 189 TATEEeNVGII-------AHNTLCFNGDELAYLENSHSLNPEADQTKKY-----IRMRGRKIYEFALKYVPDAMKQTIDS 256
Cdd:PRK12880  176 EKTDF-NEAFFelgsdgkYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFrqlenLYMDGANIFNMALECEPKSFKEILEF 254
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 257 AGLTLDDIDKILLHQANAKMDHAMISRLfKLygkssYEHAVSPMTIQEFGNSSVATVPTMYDLIKKGKmeghSFKdnsyI 336
Cdd:PRK12880  255 SKVDEKDIAFHLFHQSNAYLVDCIKEEL-KL-----NDDKVPNFIMEKYANLSACSLPALLCELDTPK----EFK----A 320
                         330
                  ....*....|....*...
gi 1527180863 337 LFASVGAGMNINAIVYKF 354
Cdd:PRK12880  321 SLSAFGAGLSWGSAVLNF 338
PRK07515 PRK07515
3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
60-311 1.52e-18

3-oxoacyl-(acyl carrier protein) synthase III; Reviewed


Pssm-ID: 236037  Cd Length: 372  Bit Score: 85.70  E-value: 1.52e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  60 DDDL-VNSDIGAKAAQIALDDAGINKESLDYII-SATNFgdvdlhgQQSFmPSLSAIIKNKLGIKNpkcINYDMIFGCPG 137
Cdd:PRK07515   89 NDELsIQAEMGVAAARQALARAGRTAEDIDAVIvACSNM-------QRAY-PAMAIEIQQALGIEG---FAFDMNVACSS 157
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 138 WVEGMVLADTLIKSGKAKNILVVGSETLSRVTDPYDRN-KMIFADGAGAVVV----TATEEENVGIIahNTLCFNG---- 208
Cdd:PRK07515  158 ATFGIQTAANAIRSGSARRVLVVNPEICSGHLNFRDRDsHFIFGDVATAVIVeradTATSAGGFEIL--GTRLFTQfsnn 235
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 209 --DELAYLENShslNPE-ADQTKKYIRMRGRKIYEFALKYVPDAMKQTIDSAGLTLDDIDKILLHQANAKMDHaMISRlf 285
Cdd:PRK07515  236 irNNFGFLNRA---DPEgIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVKRFWLHQANINMNQ-LIGK-- 309
                         250       260
                  ....*....|....*....|....*.
gi 1527180863 286 KLYGKSSyEHAVSPMTIQEFGNSSVA 311
Cdd:PRK07515  310 KVLGRDA-TPEEAPVILDEYANTSSA 334
ACP_syn_III_C pfam08541
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; This domain is found on ...
254-354 1.80e-15

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.


Pssm-ID: 430060  Cd Length: 90  Bit Score: 70.99  E-value: 1.80e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 254 IDSAGLTLDDIDKILLHQANAKMDHAMISRLfklyGKSsyEHAVsPMTIQEFGNSSVATVP-TMYDLIKKGKmeghsFKD 332
Cdd:pfam08541   1 LEKAGLTPEDIDWFVPHQANLRIIDAVAKRL----GLP--PEKV-VVNLDEYGNTSAASIPlALDEAVEEGK-----LKP 68
                          90       100
                  ....*....|....*....|..
gi 1527180863 333 NSYILFASVGAGMNINAIVYKF 354
Cdd:pfam08541  69 GDLVLLVGFGAGLTWGAALLRW 90
PRK09258 PRK09258
3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
50-346 5.93e-14

3-oxoacyl-(acyl carrier protein) synthase III; Reviewed


Pssm-ID: 181732  Cd Length: 338  Bit Score: 71.83  E-value: 5.93e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  50 ITEIENRRYVDDDLVNSDIGAKAAQIALDDAGINKESLDYIISATnfgdVdlhGQQSFMPSLSAIIKNKLGIkNPKCINY 129
Cdd:PRK09258   46 LTGIRERRWWPEGTQLSDGAIAAGRKALAEAGIDPSDIGLLINTS----V---CRDYLEPATACRVHHNLGL-PKSCANF 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 130 DMIFGCPGWVEGMVLADTLIKSGKAKNILVVGSE--------TLSRVTDPYDRNKMI---FA-----DGAGAVVVTATEE 193
Cdd:PRK09258  118 DVSNACLGFLNGMLDAANMIELGQIDYALVVSGEsareiveaTIDRLLAPETTREDFaqsFAtltlgSGAAAAVLTRGSL 197
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 194 EN-----VGIIA-----HNTLCFNGDElaylenshslnpeadqtkkyiRMR--GRKIYEFALKYVPDAMKQTIDSAGLTL 261
Cdd:PRK09258  198 HPrghrlLGGVTraateHHELCQGGRD---------------------GMRtdAVGLLKEGVELAVDTWEAFLAQLGWAV 256
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 262 DDIDKILLHQANAKMDHAMISRLfklygksSYEHAVSPMTIQEFGNSSVATVP-TMYDLIKKGKmeghsFKDNSYILFAS 340
Cdd:PRK09258  257 EQVDRVICHQVGAAHTRAILKAL-------GIDPEKVFTTFPTLGNMGPASLPiTLAMAAEEGF-----LKPGDRVALLG 324

                  ....*.
gi 1527180863 341 VGAGMN 346
Cdd:PRK09258  325 IGSGLN 330
CHS_like cd00831
Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, ...
6-351 6.96e-14

Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.


Pssm-ID: 238427 [Multi-domain]  Cd Length: 361  Bit Score: 71.87  E-value: 6.96e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863   6 IIGSGSYLPERVIERNHFSDSVFYDDNfvkiDKPNDEIIQKFVEI---TEIENRRYVDD--------------------D 62
Cdd:cd00831     4 ILAIGTAVPPHRVPQSELVDFYRRLFS----SDHLPELKEKLKRLcakTGIETRYLVLPggeetyaprpemspsldernD 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  63 LVNSDI---GAKAAQIALDDAGINKESLDYIISATNFGdvdlhgqqSFMPSLSAIIKNKLGIkNPKCINYDMIF-GCPGW 138
Cdd:cd00831    80 IALEEArelAEEAARGALDEAGLRPSDIDHLVVNTSTG--------NPTPSLDAMLINRLGL-RPDVKRYNLGGmGCSAG 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 139 VEGMVLADTLIKSGKAKNILVVGSETLSR-VTDPYDRNKMI----FADGAGAVVVTATEEENVGIIAHNTLcfngdelay 213
Cdd:cd00831   151 AIALDLAKDLLEANPGARVLVVSTELCSLwYRGPDHRSMLVgnalFGDGAAAVLLSNDPRDRRRERPLFEL--------- 221
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 214 LENSHSLNPEADQTKKY-IRMRG----------RKIYEFALKYVPDAMKQTIDsaGLTLDDIDKILLHQANAKMDHAMIS 282
Cdd:cd00831   222 VRAASTLLPDSEDAMGWhLGEEGltfvlsrdvpRLVEKNLERVLRKLLARLGI--GLFKLAFDHWCVHPGGRAVLDAVEK 299
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1527180863 283 RLfklyGKSSYEHAVSPMTIQEFGNSSVATVptMYDL---IKKGKMEGhsfkdNSYILFASVGAGMNINAIV 351
Cdd:cd00831   300 AL----GLSPEDLEASRMVLRRYGNMSSSSV--LYVLaymEAKGRVKR-----GDRGLLIAFGPGFTCESAV 360
decarbox_cond_enzymes cd00825
decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new ...
69-347 1.02e-13

decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).


Pssm-ID: 238421 [Multi-domain]  Cd Length: 332  Bit Score: 71.13  E-value: 1.02e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  69 GAKAAQIALDDAGINKE----SLDYIISATNFGDVdlHGQQS----------------FMPSLSAIIKNKLGIKNPkciN 128
Cdd:cd00825    15 GFEAAERAIADAGLSREyqknPIVGVVVGTGGGSP--RFQVFgadamravgpyvvtkaMFPGASGQIATPLGIHGP---A 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 129 YDMIFGCPGWVEGMVLADTLIKSGKAKNILVVGSETLSRVTD-----------------PYD--RNKMIFADGAGAVVVT 189
Cdd:cd00825    90 YDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDcefdamgalstpekasrTFDaaADGFVFGDGAGALVVE 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 190 ATEEEnvgiiahntlcfngdelayLENSHSLNPEADQTKKYIRMRGRKIYEFALKYVPDAMKQTIDSAGLTLDDIDKILL 269
Cdd:cd00825   170 ELEHA-------------------LARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVA 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 270 HQANAkmdhAMISRLFKLYGKSSYEHAVSPM--TIQEFGNSSVATVptMYDLIKKGKMEGHSFKDNSYILFASVGAGMNI 347
Cdd:cd00825   231 HGTGT----PIGDVKELKLLRSEFGDKSPAVsaTKAMTGNLSSAAV--VLAVDEAVLMLEHGFIPPSIHIEELDEAGLNI 304
cond_enzymes cd00327
Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) ...
66-274 1.52e-12

Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.


Pssm-ID: 238201 [Multi-domain]  Cd Length: 254  Bit Score: 66.70  E-value: 1.52e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  66 SDIGAKAAQIALDDAGINKESLDYIISATNFGDvdlhgqqSFMPSLSAIIKNKLGIknPKCINYDMIFGCPGWVEGMVLA 145
Cdd:cd00327     8 SELGFEAAEQAIADAGLSKGPIVGVIVGTTGGS-------GEFSGAAGQLAYHLGI--SGGPAYSVNQACATGLTALALA 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 146 DTLIKSGKAKNILVVGSEtlsrvtdpydrnKMIFADGAGAVVVTATEEENV------GIIAHNTLCFNGDELAYLENSHS 219
Cdd:cd00327    79 VQQVQNGKADIVLAGGSE------------EFVFGDGAAAAVVESEEHALRrgahpqAEIVSTAATFDGASMVPAVSGEG 146
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1527180863 220 LNPeadqtkkyirmrgrkiyefalkyvpdAMKQTIDSAGLTLDDIDKILLHQANA 274
Cdd:cd00327   147 LAR--------------------------AARKALEGAGLTPSDIDYVEAHGTGT 175
PRK06840 PRK06840
3-oxoacyl-ACP synthase;
1-189 5.69e-11

3-oxoacyl-ACP synthase;


Pssm-ID: 235872  Cd Length: 339  Bit Score: 63.10  E-value: 5.69e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863   1 MPNTI-IIGSGSYLPERVIERNHFSDsvfyddnfvKIDKPNDEIIQKFveitEIENRRYVDDDLVNSDIGAKAAQIALDD 79
Cdd:PRK06840    1 MEMNVgIVGTGVYLPKDVMTAEEIAE---------KTGIPEEVVIEKF----GIYEKPVPGPEDHTSDMAIAAAKPALKQ 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  80 AGINKESLDYIISatnfgdvdlHGQQS---FMPSLSAIIKNKLGIKNPKCinYDMIFGCPGWVEGMVLADTLIKSGKA-K 155
Cdd:PRK06840   68 AGVDPAAIDVVIY---------IGSEHkdyPVWSSAPKIQHEIGAKNAWA--FDIMAVCASFPIALKVAKDLLYSDPSiE 136
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1527180863 156 NILVVG---SETLSRVTDPYDRNKMIFADGAGAVVVT 189
Cdd:PRK06840  137 NVLLVGgyrNSDLVDYDNPRTRFMFNFAAGGSAALLK 173
SCP-x_thiolase cd00829
Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; ...
67-173 1.41e-07

Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.


Pssm-ID: 238425 [Multi-domain]  Cd Length: 375  Bit Score: 52.65  E-value: 1.41e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  67 DIGAKAAQIALDDAGINKESLDYIIsatnFGDVDLHGQQSFmpsLSAIIKNKLGIKNPKCINYDMifGCPGWVEGMVLAD 146
Cdd:cd00829    18 ELAAEAARAALDDAGLEPADIDAVV----VGNAAGGRFQSF---PGALIAEYLGLLGKPATRVEA--AGASGSAAVRAAA 88
                          90       100
                  ....*....|....*....|....*..
gi 1527180863 147 TLIKSGKAKNILVVGSETLSRVTDPYD 173
Cdd:cd00829    89 AAIASGLADVVLVVGAEKMSDVPTGDE 115
FabB COG0304
3-oxoacyl-(acyl-carrier-protein) synthase [Lipid transport and metabolism, Secondary ...
72-298 2.83e-05

3-oxoacyl-(acyl-carrier-protein) synthase [Lipid transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism]; 3-oxoacyl-(acyl-carrier-protein) synthase is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440073 [Multi-domain]  Cd Length: 409  Bit Score: 45.47  E-value: 2.83e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  72 AAQIALDDAGINKESLDY----IISATNFGDVDLHGQQ------------------SFMPSL-SAIIKNKLGIKNPkciN 128
Cdd:COG0304    78 AAREALADAGLDLDEVDPdrtgVIIGSGIGGLDTLEEAyrallekgprrvspffvpMMMPNMaAGHVSIRFGLKGP---N 154
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 129 YDMIFGCPGWVEGMVLADTLIKSGKAKNILVVGSET---------------LSRVTD-------PYD--RNKMIFADGAG 184
Cdd:COG0304   155 YTVSTACASGAHAIGEAYRLIRRGRADVMIAGGAEAaitplglagfdalgaLSTRNDdpekasrPFDkdRDGFVLGEGAG 234
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 185 AVVVtatEEE------NVGIIAhntlcfngdELA-YLENS---HSLNPEADqtkkyirmrGRKIYEfalkyvpdAMKQTI 254
Cdd:COG0304   235 VLVL---EELehakarGAKIYA---------EVVgYGASSdayHITAPAPD---------GEGAAR--------AMRAAL 285
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1527180863 255 DSAGLTLDDIDKILLH----QANAKMDHAMISRLFklyGKSSYEHAVS 298
Cdd:COG0304   286 KDAGLSPEDIDYINAHgtstPLGDAAETKAIKRVF---GDHAYKVPVS 330
PRK08439 PRK08439
3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
68-193 4.86e-04

3-oxoacyl-(acyl carrier protein) synthase II; Reviewed


Pssm-ID: 236265 [Multi-domain]  Cd Length: 406  Bit Score: 41.64  E-value: 4.86e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  68 IGAKAAQIALDDAGINKESLDY----IISATNFGDVDLHGQQS--------------FMPS-----LSAIIKNKLGIKNP 124
Cdd:PRK08439   75 LGLKAAREAMKDAGFLPEELDAerfgVSSASGIGGLPNIEKNSiicfekgprkispfFIPSalvnmLGGFISIEHGLKGP 154
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 125 kciNYDMIFGCPGWVEGMVLADTLIKSGKAKNILVVGSET---------------LSRVTD-------PYD--RNKMIFA 180
Cdd:PRK08439  155 ---NLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESaicpvgiggfaamkaLSTRNDdpkkasrPFDkdRDGFVMG 231
                         170
                  ....*....|...
gi 1527180863 181 DGAGAVVVTATEE 193
Cdd:PRK08439  232 EGAGALVLEEYES 244
PRK04262 PRK04262
hypothetical protein; Provisional
59-275 1.34e-03

hypothetical protein; Provisional


Pssm-ID: 235266 [Multi-domain]  Cd Length: 347  Bit Score: 40.27  E-value: 1.34e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  59 VDDDLVNsdIGAKAAQIALDDAGINKESldyiISATNFG------DVDlhgqqsfmPSlSAIIKNKLGIKnPKCINYDMI 132
Cdd:PRK04262   47 PDEDTAT--IAVEAARNALKRAGIDPKE----IGAVYVGseshpyAVK--------PT-ATIVAEALGAT-PDLTAADLE 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863 133 FGCPGWVEGMVLADTLIKSGKAKNILVVGSETlsRVTDPYDRNKMIFADGAGAVVVTATEeenvgiiahntlcfngdELA 212
Cdd:PRK04262  111 FACKAGTAALQAAMGLVKSGMIKYALAIGADT--AQGAPGDALEYTAAAGGAAFIIGKEE-----------------VIA 171
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1527180863 213 YLENSHSL---NPE--ADQTKKYIRMRGRKIYEFA-LKYVPDAMKQTIDSAGLTLDDIDKILLHQANAK 275
Cdd:PRK04262  172 EIEATYSYttdTPDfwRREGEPYPRHGGRFTGEPAyFKHIISAAKGLMEKLGLKPSDYDYAVFHQPNGK 240
PRK06816 PRK06816
StlD/DarB family beta-ketosynthase;
65-188 1.79e-03

StlD/DarB family beta-ketosynthase;


Pssm-ID: 235866  Cd Length: 378  Bit Score: 39.89  E-value: 1.79e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  65 NSDIGAKAAQIALDDAGINKESLDYIISATNFGDVdlhgqqsFMPSLSAIIKNKLGIKNPKCINYDMIfgCPGWVEGMVL 144
Cdd:PRK06816   63 NAQMAAEAIRDLLDDAGFSLGDIELLACGTSQPDQ-------LMPGHASMVHGELGAPPIEVVSSAGV--CAAGMMALKY 133
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1527180863 145 ADTLIKSGKAKNILVVGSETLSRV------------TDPYDRNKMI----------FADGAGAVVV 188
Cdd:PRK06816  134 AYLSVKAGESRNAVATASELASRWfrasrfeaeeekLAELEENPEIafekdflrwmLSDGAGAVLL 199
Thiolase_N pfam00108
Thiolase, N-terminal domain; Thiolase is reported to be structurally related to beta-ketoacyl ...
62-175 3.13e-03

Thiolase, N-terminal domain; Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase.


Pssm-ID: 459676 [Multi-domain]  Cd Length: 260  Bit Score: 38.82  E-value: 3.13e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527180863  62 DLVNSDIGAKAAQIALDDAGINKESLDYIIsatnFGDVdLHGQQSFMPSLSAIIknKLGIKNPKC---INYDMIFGcpgw 138
Cdd:pfam00108  20 DVSAVELGAEAIKAALERAGVDPEDVDEVI----VGNV-LQAGEGQNPARQAAL--KAGIPDSAPavtINKVCGSG---- 88
                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1527180863 139 VEGMVLADTLIKSGKAKNILVVGSETLSRVTDPYDRN 175
Cdd:pfam00108  89 LKAVYLAAQSIASGDADVVLAGGVESMSHAPYALPTD 125
PRK09185 PRK09185
beta-ketoacyl-ACP synthase;
248-285 9.62e-03

beta-ketoacyl-ACP synthase;


Pssm-ID: 236398 [Multi-domain]  Cd Length: 392  Bit Score: 37.51  E-value: 9.62e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1527180863 248 DAMKQTIDSAGLTLDDIDKILLH----QANAKMDHAMISRLF 285
Cdd:PRK09185  264 LAMQQALADAGLAPADIGYINLHgtatPLNDAMESRAVAAVF 305
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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