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Conserved domains on  [gi|1519512721|gb|AZA87017|]
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carboxypeptidase regulatory-like domain-containing protein [Chryseobacterium shandongense]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FolP super family cl43091
Dihydropteroate synthase [Coenzyme transport and metabolism]; Dihydropteroate synthase is part ...
 170-210 8.56e-03

Dihydropteroate synthase [Coenzyme transport and metabolism]; Dihydropteroate synthase is part of the Pathway/BioSystem: Folate biosynthesis


The actual alignment was detected with superfamily member COG0294:

Pssm-ID: 440063  Cd Length: 274  Bit Score: 36.57  E-value: 8.56e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1519512721 170 GDARRMKRQYRYDDLQEDI-AWIRERVEddYFIKAGIPKERI 210
Cdd:COG0294   141 GTPQTMQRNPHYDDVVAEVrDFLEERIE--AAEAAGIARERI 180
 
Name Accession Description Interval E-value
FolP COG0294
Dihydropteroate synthase [Coenzyme transport and metabolism]; Dihydropteroate synthase is part ...
 170-210 8.56e-03

Dihydropteroate synthase [Coenzyme transport and metabolism]; Dihydropteroate synthase is part of the Pathway/BioSystem: Folate biosynthesis


Pssm-ID: 440063  Cd Length: 274  Bit Score: 36.57  E-value: 8.56e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1519512721 170 GDARRMKRQYRYDDLQEDI-AWIRERVEddYFIKAGIPKERI 210
Cdd:COG0294   141 GTPQTMQRNPHYDDVVAEVrDFLEERIE--AAEAAGIARERI 180
 
Name Accession Description Interval E-value
FolP COG0294
Dihydropteroate synthase [Coenzyme transport and metabolism]; Dihydropteroate synthase is part ...
 170-210 8.56e-03

Dihydropteroate synthase [Coenzyme transport and metabolism]; Dihydropteroate synthase is part of the Pathway/BioSystem: Folate biosynthesis


Pssm-ID: 440063  Cd Length: 274  Bit Score: 36.57  E-value: 8.56e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1519512721 170 GDARRMKRQYRYDDLQEDI-AWIRERVEddYFIKAGIPKERI 210
Cdd:COG0294   141 GTPQTMQRNPHYDDVVAEVrDFLEERIE--AAEAAGIARERI 180
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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