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Conserved domains on  [gi|1438970436|gb|AXI24702|]
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2-oxoglutarate ferredoxin oxidoreductase subunit gamma [Methanofervidicoccus sp. A16]

Protein Classification

2-oxoacid:acceptor oxidoreductase family protein; indolepyruvate oxidoreductase subunit beta( domain architecture ID 10013088)

2-oxoacid:acceptor oxidoreductase family protein similar to Thermotoga maritima pyruvate synthase subunit PorC and Aromatoleum evansii NADH-dependent phenylglyoxylate dehydrogenase subunit gamma; indolepyruvate oxidoreductase subunit beta catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK08537 PRK08537
2-oxoacid:ferredoxin oxidoreductase subunit gamma;
1-177 1.99e-114

2-oxoacid:ferredoxin oxidoreductase subunit gamma;


:

Pssm-ID: 181462 [Multi-domain]  Cd Length: 177  Bit Score: 322.39  E-value: 1.99e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436   1 MRKEVRISGFGGQGIVLAGVILGRSAALYDGKNAVQTQSYGPEARGGASKSEVVISEEEIDYPKVIKPDILVCMSQQAFD 80
Cdd:PRK08537    1 MRKEIRISGFGGQGIILAGVILGRAAALYDGKYAVQTQSYGPEARGGASKSEVVISDEEIDYPKVISPDILVAMSQEAYD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436  81 KYGRDIKDGGTVIVDRDLVTVPENFYNGNVKLYKIPFTDIAYKDIGLKIVANIVMLGALVRITGVVSKESMKKAILDSVP 160
Cdd:PRK08537   81 KYLDDLKEGGTVIVDPDLVPIREIEYEKKVKVYKVPFTEIAEEEIGLSIVANIVMLGALTKLTGIVSKEAIEKAILDSVP 160

                         170
                  ....*....|....*..
gi 1438970436 161 KGTEEKNLMAFERGYNY 177
Cdd:PRK08537  161 KGTEEKNLMAFEKGYEL 177
 
Name Accession Description Interval E-value
PRK08537 PRK08537
2-oxoacid:ferredoxin oxidoreductase subunit gamma;
1-177 1.99e-114

2-oxoacid:ferredoxin oxidoreductase subunit gamma;


Pssm-ID: 181462 [Multi-domain]  Cd Length: 177  Bit Score: 322.39  E-value: 1.99e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436   1 MRKEVRISGFGGQGIVLAGVILGRSAALYDGKNAVQTQSYGPEARGGASKSEVVISEEEIDYPKVIKPDILVCMSQQAFD 80
Cdd:PRK08537    1 MRKEIRISGFGGQGIILAGVILGRAAALYDGKYAVQTQSYGPEARGGASKSEVVISDEEIDYPKVISPDILVAMSQEAYD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436  81 KYGRDIKDGGTVIVDRDLVTVPENFYNGNVKLYKIPFTDIAYKDIGLKIVANIVMLGALVRITGVVSKESMKKAILDSVP 160
Cdd:PRK08537   81 KYLDDLKEGGTVIVDPDLVPIREIEYEKKVKVYKVPFTEIAEEEIGLSIVANIVMLGALTKLTGIVSKEAIEKAILDSVP 160

                         170
                  ....*....|....*..
gi 1438970436 161 KGTEEKNLMAFERGYNY 177
Cdd:PRK08537  161 KGTEEKNLMAFEKGYEL 177
PorG COG1014
Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, gamma ...
 1-178 4.95e-57

Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, gamma subunit [Energy production and conversion]; Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, gamma subunit is part of the Pathway/BioSystem: Pyruvate oxidation


Pssm-ID: 440638 [Multi-domain]  Cd Length: 424  Bit Score: 184.51  E-value: 4.95e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436   1 MRKEVRISGFGGQGIVLAGVILGRsAALYDGKNAVQTQSYGPEARGGASKSEVVISEEEIDYPKVIKPDILVCMSQQAFD 80
Cdd:COG1014     3 MDLEIRIAGVGGQGVVTAGKILAK-AAMREGYYVQGYPSYGSEQRGGPVVSHVRISDEPIRSPLIDEADVLIALDPEELD 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436  81 KYGRDIKDGGTVIVDRDLVTVPENFY------NGNVKLYKIPFTDIAYKDIGLKIVANIVMLGALVRITGvVSKESMKKA 154
Cdd:COG1014    82 RVLDGLKPGGVLIVNSSLVPPEVWRLpqealeRKDIRVYVIDATKIAKELLGNARVANTVMLGALAALLG-LPLEALEEA 160

                         170       180
                  ....*....|....*....|....*..
gi 1438970436 155 ILDSVPKGTE---EKNLMAFERGYNYM 178
Cdd:COG1014   161 IEETFGKKGEkvvELNLKAFEAGYEAA 187
POR pfam01558
Pyruvate ferredoxin/flavodoxin oxidoreductase; This family includes a region of the large ...
 11-176 9.36e-41

Pyruvate ferredoxin/flavodoxin oxidoreductase; This family includes a region of the large protein pyruvate-flavodoxin oxidoreductase and the whole pyruvate ferredoxin oxidoreductase gamma subunit protein. It is not known whether the gamma subunit has a catalytic or regulatory role. Pyruvate oxidoreductase (POR) catalyzes the final step in the fermentation of carbohydrates in anaerobic microorganizms. This involves the oxidative decarboxylation of pyruvate with the participation of thiamine followed by the transfer of an acetyl moiety to coenzyme A for the synthesis of acetyl-CoA. The family also includes pyruvate flavodoxin oxidoreductase as encoded by the nifJ gene in cyanobacterium which is required for growth on molecular nitrogen when iron is limited.


Pssm-ID: 426323 [Multi-domain]  Cd Length: 172  Bit Score: 135.51  E-value: 9.36e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436  11 GGQGIVLAGVILGRsAALYDGKNAVQTQSYGPEARGGASKSEVVISEEEI-DYPKVIKPDILVCMSQQAFDKYGRDIKDG 89
Cdd:pfam01558   1 GGQGVVTAGKILAK-AAARAGYYVQATPEYGSEIRGGPVVSHVRISDEPIvPAIPVGEADLLVALDPETLDRHLDGLKPG 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436  90 GTVIVDRDLVTVPENF-----YNGNVKLYKIPFTDIAYKDIGLKIVANIVMLGALVRITGvVSKESMKKAILDSVPKGTE 164
Cdd:pfam01558  80 GIIIYNSSEVPPELLEkdlpaYPRLARVYGVPATEIAKEAGGNSRAANTVMLGALAALLG-LPLEALEEAIKKRFPGKAK 158

                         170
                  ....*....|....
gi 1438970436 165 --EKNLMAFERGYN 176
Cdd:pfam01558 159 viELNLKAFRAGYE 172
PorC_KorC TIGR02175
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; A number ...
 4-179 6.61e-31

2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; A number of anaerobic and microaerophilic species lack pyruvate dehydrogenase and have instead a four subunit, oxygen-sensitive pyruvate oxidoreductase, with either ferredoxins or flavodoxins (H. pylori) used as the acceptor. Several related four-subunit enzymes may exist in the same species. This model describes the gamma subunit. In Pyrococcus furious, enzymes active on pyruvate and 2-ketoisovalerate share a common gamma subunit.


Pssm-ID: 274014 [Multi-domain]  Cd Length: 177  Bit Score: 110.13  E-value: 6.61e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436   4 EVRISGFGGQGIVLAGVILGRsAALYDGKNAVQTQSYGPEARGGASKSEVVISEEEIDYPKVIK-PDILVCMSQQAFDKY 82
Cdd:TIGR02175   3 EIRFHGRGGQGAVTASQLLAE-AAFLEGKYAQAFPEFGAERRGAPVRAFLRISDRPIRVHSQIYePDYVVVLDPTLLKTV 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436  83 G--RDIKDGGTVIVDRDLvtvPENFYNGNVKLYKIPFTDIAYKDIGLKIVaNIVMLGALVRITGVVSKESMKKAILDSVP 160
Cdd:TIGR02175  82 NvtAGLKEDGILIVNTKK---DPEELRKELKVYTVDATKIALVVLGRPIV-NTPMLGAFAKVTGLVSLESLEKAIEESFP 157

                         170
                  ....*....|....*....
gi 1438970436 161 KGTEEKNLMAFERGYNYMG 179
Cdd:TIGR02175 158 GKLAEANAKAVERAYEEVK 176
 
Name Accession Description Interval E-value
PRK08537 PRK08537
2-oxoacid:ferredoxin oxidoreductase subunit gamma;
1-177 1.99e-114

2-oxoacid:ferredoxin oxidoreductase subunit gamma;


Pssm-ID: 181462 [Multi-domain]  Cd Length: 177  Bit Score: 322.39  E-value: 1.99e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436   1 MRKEVRISGFGGQGIVLAGVILGRSAALYDGKNAVQTQSYGPEARGGASKSEVVISEEEIDYPKVIKPDILVCMSQQAFD 80
Cdd:PRK08537    1 MRKEIRISGFGGQGIILAGVILGRAAALYDGKYAVQTQSYGPEARGGASKSEVVISDEEIDYPKVISPDILVAMSQEAYD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436  81 KYGRDIKDGGTVIVDRDLVTVPENFYNGNVKLYKIPFTDIAYKDIGLKIVANIVMLGALVRITGVVSKESMKKAILDSVP 160
Cdd:PRK08537   81 KYLDDLKEGGTVIVDPDLVPIREIEYEKKVKVYKVPFTEIAEEEIGLSIVANIVMLGALTKLTGIVSKEAIEKAILDSVP 160

                         170
                  ....*....|....*..
gi 1438970436 161 KGTEEKNLMAFERGYNY 177
Cdd:PRK08537  161 KGTEEKNLMAFEKGYEL 177
PorG COG1014
Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, gamma ...
 1-178 4.95e-57

Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, gamma subunit [Energy production and conversion]; Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, gamma subunit is part of the Pathway/BioSystem: Pyruvate oxidation


Pssm-ID: 440638 [Multi-domain]  Cd Length: 424  Bit Score: 184.51  E-value: 4.95e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436   1 MRKEVRISGFGGQGIVLAGVILGRsAALYDGKNAVQTQSYGPEARGGASKSEVVISEEEIDYPKVIKPDILVCMSQQAFD 80
Cdd:COG1014     3 MDLEIRIAGVGGQGVVTAGKILAK-AAMREGYYVQGYPSYGSEQRGGPVVSHVRISDEPIRSPLIDEADVLIALDPEELD 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436  81 KYGRDIKDGGTVIVDRDLVTVPENFY------NGNVKLYKIPFTDIAYKDIGLKIVANIVMLGALVRITGvVSKESMKKA 154
Cdd:COG1014    82 RVLDGLKPGGVLIVNSSLVPPEVWRLpqealeRKDIRVYVIDATKIAKELLGNARVANTVMLGALAALLG-LPLEALEEA 160

                         170       180
                  ....*....|....*....|....*..
gi 1438970436 155 ILDSVPKGTE---EKNLMAFERGYNYM 178
Cdd:COG1014   161 IEETFGKKGEkvvELNLKAFEAGYEAA 187
PRK08338 PRK08338
2-oxoacid:ferredoxin oxidoreductase subunit gamma;
4-175 1.04e-46

2-oxoacid:ferredoxin oxidoreductase subunit gamma;


Pssm-ID: 181394 [Multi-domain]  Cd Length: 170  Bit Score: 150.47  E-value: 1.04e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436   4 EVRISGFGGQGIVLAGVILGRSAALyDGKNAVQTQSYGPEARGGASKSEVVISEEEIDYPKVIKPDILVCMSQQAFDKYG 83
Cdd:PRK08338    2 QIRFAGIGGQGVVLAGVILGEAAAI-EGLNVLQTQDYSSASRGGHSIADVIISKEPIYDVMVTKADVLVALHQLGYETAK 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436  84 RDIKDGGTVIVDRDLVTvPENFYNGnvklykIPFTDIAYKDIGLKIVANIVMLGALVRITGVVSKESMKKAILDSVPKGT 163
Cdd:PRK08338   81 SSLKEDGLLIIDTDLVK-PDRDYIG------APFTRIAEETTGLALTVNMVALGYLVAKTGVVKKESVEEAIRRRVPKGT 153

                         170
                  ....*....|..
gi 1438970436 164 EEKNLMAFERGY 175
Cdd:PRK08338  154 EEINIKAFRKGY 165
POR pfam01558
Pyruvate ferredoxin/flavodoxin oxidoreductase; This family includes a region of the large ...
 11-176 9.36e-41

Pyruvate ferredoxin/flavodoxin oxidoreductase; This family includes a region of the large protein pyruvate-flavodoxin oxidoreductase and the whole pyruvate ferredoxin oxidoreductase gamma subunit protein. It is not known whether the gamma subunit has a catalytic or regulatory role. Pyruvate oxidoreductase (POR) catalyzes the final step in the fermentation of carbohydrates in anaerobic microorganizms. This involves the oxidative decarboxylation of pyruvate with the participation of thiamine followed by the transfer of an acetyl moiety to coenzyme A for the synthesis of acetyl-CoA. The family also includes pyruvate flavodoxin oxidoreductase as encoded by the nifJ gene in cyanobacterium which is required for growth on molecular nitrogen when iron is limited.


Pssm-ID: 426323 [Multi-domain]  Cd Length: 172  Bit Score: 135.51  E-value: 9.36e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436  11 GGQGIVLAGVILGRsAALYDGKNAVQTQSYGPEARGGASKSEVVISEEEI-DYPKVIKPDILVCMSQQAFDKYGRDIKDG 89
Cdd:pfam01558   1 GGQGVVTAGKILAK-AAARAGYYVQATPEYGSEIRGGPVVSHVRISDEPIvPAIPVGEADLLVALDPETLDRHLDGLKPG 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436  90 GTVIVDRDLVTVPENF-----YNGNVKLYKIPFTDIAYKDIGLKIVANIVMLGALVRITGvVSKESMKKAILDSVPKGTE 164
Cdd:pfam01558  80 GIIIYNSSEVPPELLEkdlpaYPRLARVYGVPATEIAKEAGGNSRAANTVMLGALAALLG-LPLEALEEAIKKRFPGKAK 158

                         170
                  ....*....|....
gi 1438970436 165 --EKNLMAFERGYN 176
Cdd:pfam01558 159 viELNLKAFRAGYE 172
oorC PRK08441
2-oxoglutarate-acceptor oxidoreductase subunit OorC; Reviewed
 1-177 8.31e-35

2-oxoglutarate-acceptor oxidoreductase subunit OorC; Reviewed


Pssm-ID: 181425 [Multi-domain]  Cd Length: 183  Bit Score: 120.60  E-value: 8.31e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436   1 MRKEVRISGFGGQGIVLAGVILGRsAALYDGKNAVQTQSYGPEARGGASKSEVVISEEEIDYPKVIKPDI--LVCMSQQA 78
Cdd:PRK08441    1 MRAQLRFTGVGGQGVLLAGEILAE-AKIKAGGYGVKASTYTSQVRGGPTKVDIILDDKEILYPYANEGEIdfMLSTAQIS 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436  79 FDKYGRDIKDGGTVIVDRDLVTVPENFYnGNVKLYKIPFTDIAYKDIGLKIVANIVMLGALVRITGVVSKESMKKAILDS 158
Cdd:PRK08441   80 YNQFKSGVKEGGIIVVEPNLVKPTEEDK-KKWQIYEIPIITIAKDEVGNVITQSVVALAIAVEMTKCVDEDIVKDTMLSK 158

                         170
                  ....*....|....*....
gi 1438970436 159 VPKGTEEKNLMAFERGYNY 177
Cdd:PRK08441  159 VPAKVAEANKKAFELGKKY 177
PorC_KorC TIGR02175
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; A number ...
 4-179 6.61e-31

2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; A number of anaerobic and microaerophilic species lack pyruvate dehydrogenase and have instead a four subunit, oxygen-sensitive pyruvate oxidoreductase, with either ferredoxins or flavodoxins (H. pylori) used as the acceptor. Several related four-subunit enzymes may exist in the same species. This model describes the gamma subunit. In Pyrococcus furious, enzymes active on pyruvate and 2-ketoisovalerate share a common gamma subunit.


Pssm-ID: 274014 [Multi-domain]  Cd Length: 177  Bit Score: 110.13  E-value: 6.61e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436   4 EVRISGFGGQGIVLAGVILGRsAALYDGKNAVQTQSYGPEARGGASKSEVVISEEEIDYPKVIK-PDILVCMSQQAFDKY 82
Cdd:TIGR02175   3 EIRFHGRGGQGAVTASQLLAE-AAFLEGKYAQAFPEFGAERRGAPVRAFLRISDRPIRVHSQIYePDYVVVLDPTLLKTV 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436  83 G--RDIKDGGTVIVDRDLvtvPENFYNGNVKLYKIPFTDIAYKDIGLKIVaNIVMLGALVRITGVVSKESMKKAILDSVP 160
Cdd:TIGR02175  82 NvtAGLKEDGILIVNTKK---DPEELRKELKVYTVDATKIALVVLGRPIV-NTPMLGAFAKVTGLVSLESLEKAIEESFP 157

                         170
                  ....*....|....*....
gi 1438970436 161 KGTEEKNLMAFERGYNYMG 179
Cdd:TIGR02175 158 GKLAEANAKAVERAYEEVK 176
PRK08534 PRK08534
pyruvate ferredoxin oxidoreductase subunit gamma; Reviewed
 3-178 1.13e-24

pyruvate ferredoxin oxidoreductase subunit gamma; Reviewed


Pssm-ID: 181460 [Multi-domain]  Cd Length: 181  Bit Score: 94.34  E-value: 1.13e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436   3 KEVRISGFGGQGIVLAGVILGRsAALYDGKNAVQTQSYGPEARGGASKSEVVISEEEI---------DYPKVIKPDILVC 73
Cdd:PRK08534    2 IEIRFHGRGGQGAVTAAEILAK-AAFEDGKFSQAFPFFGVERRGAPVMAFTRIDDKPIrlrsqiyepDYVIVQDPTLLDS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436  74 MSQQAfdkygrDIKDGGTVIVDRDLvTVPENFYNGNVKLYKIPFTDIAYKDIGLKIVaNIVMLGALVRITGVVSKESMKK 153
Cdd:PRK08534   81 VDVTS------GLKKDGIIIINTTK-DPEDLKYDTKAKVYTIDATKIALDVLGVPIV-NTTMLGAFAGATGEVSLESLKK 152

                         170       180
                  ....*....|....*....|....*
gi 1438970436 154 AILDSVPKGTEEKNLMAFERGYNYM 178
Cdd:PRK08534  153 AILERFPGKLGEKNAEAVEKAYNLM 177
PRK06853 PRK06853
indolepyruvate oxidoreductase subunit beta; Reviewed
 1-177 6.30e-24

indolepyruvate oxidoreductase subunit beta; Reviewed


Pssm-ID: 180732 [Multi-domain]  Cd Length: 197  Bit Score: 92.62  E-value: 6.30e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436   1 MRKEVRISGFGGQGIVLAGVILGRsAALYDGKNAVQTQSYGPEARGGASKSEVVISEEeiDYPKVIKP---DILVcmsqq 77
Cdd:PRK06853    2 MKTNILIVGVGGQGILLASKILGE-AALAAGYDVKVSEVHGMSQRGGSVVSHVRFGDE--VYSPLIPEgkaDLLL----- 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436  78 AFDK-----YGRDIKDGGTVIVDR----------------DLVTVPENFYNGNVKLYKIPFTDIAyKDIGLKIVANIVML 136
Cdd:PRK06853   74 AFEPlealrYLPYLKKGGKVVVNTqpivpvpvslglakypEDEEILEELKKLGIKVYVIDAEKIA-KEAGNIKAANVVLL 152

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1438970436 137 GALVRITGvVSKESMKKAILDSVPKGTEEKNLMAFERGYNY 177
Cdd:PRK06853  153 GALAKFLP-IDEETLEEAIKERVPPKFVEVNLKAFEAGREA 192
PRK14029 PRK14029
pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma; Provisional
 4-176 9.26e-18

pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma; Provisional


Pssm-ID: 172523 [Multi-domain]  Cd Length: 185  Bit Score: 76.60  E-value: 9.26e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436   4 EVRISGFGGQGIVLAGVILGrSAALYDGKNAVQTQSYGPEARGGASKSEVVISEEEIDYP-KVIKPDILVCMSQQAFDKY 82
Cdd:PRK14029    3 EIRFHGRGGQGAVTAANILA-EAAFLEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRIKtQIYEPDVVVVLDPSLLDTV 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436  83 G--RDIKDGGTVIV--DRDLVTVPENFYNGNVKLYKIPFTDIAYKDIGLKIVaNIVMLGALVRITGVVSKESMKKAILDS 158
Cdd:PRK14029   82 DvtAGLKDGGIVIVntEKSKEEVLEKLKKKPKKLALVDATTIALEILGLPIT-NTAILGAVAKATGLVKIESVEEAIKDT 160

                         170
                  ....*....|....*...
gi 1438970436 159 VPKGTEEKNLMAFERGYN 176
Cdd:PRK14029  161 FSGELGEKNAKAAREAFE 178
PRK14028 PRK14028
pyruvate ferredoxin oxidoreductase subunit gamma/delta; Provisional
 1-175 1.62e-13

pyruvate ferredoxin oxidoreductase subunit gamma/delta; Provisional


Pssm-ID: 172522 [Multi-domain]  Cd Length: 312  Bit Score: 66.94  E-value: 1.62e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436   1 MRKEVRISGFGGQGIVLAGVILGrSAALYDGKNAVQTQSYGPEARGGASKSEVVISEEEIDYPKVIK-PDILVCMSQQAF 79
Cdd:PRK14028    1 MRIETVWLGRGGQGIVTATYIIA-NAAVIDGFYAIANPEFGAERRGAPVKAFLTISKNPIEDQEPVKtPDVAVIFDDKLI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436  80 D--KYGRD-IKDGGTVIVDRDlvTVPENFY----NGNVKLYKIPFTDIAYKDIGLKiVANIVMLGALVRITGVVSKESMK 152
Cdd:PRK14028   80 DpmRFAIDaVKPGGYVILNTG--KQPEEARklvgRDDVYIVVLDAIGIARKHLKLD-VPNGPLAGAFSKVMGFPSLESIR 156

                         170       180
                  ....*....|....*....|...
gi 1438970436 153 KAILDSVPKGTEEkNLMAFERGY 175
Cdd:PRK14028  157 TAFETQLGKAVEE-NFAATKEAY 178
PRK06274 PRK06274
indolepyruvate oxidoreductase subunit beta;
1-174 2.67e-07

indolepyruvate oxidoreductase subunit beta;


Pssm-ID: 235765 [Multi-domain]  Cd Length: 197  Bit Score: 48.51  E-value: 2.67e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436   1 MRKEVRISGFGGQGIVLAGVILGrSAALYDGKNAVQTQSYGPEARGGASKSEVVISEEEidYPKVIKP---DILVCMSQQ 77
Cdd:PRK06274    1 MNFNLIIAGVGGQGVLLASRILA-NAAMNEGFHVRTAETLGMSQREGSVISHLRFGDEI--SSPLIPEgqaDLLLALEPA 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436  78 AFDKYGRDIKDGGTVIVD-------RDLVTVPE------NFYNGNVKLYK-IPFTDIAyKDIGLKIVANIVMLGALVRIT 143
Cdd:PRK06274   78 EVARNLHFLKKGGKIIVNayaihpaTTVGSEKYdpekeiKFAKEKICDVIcIDFTKLA-DEIGNPRSLNVIMLGAAFGAG 156

                         170       180       190
                  ....*....|....*....|....*....|..
gi 1438970436 144 GV-VSKESMKKAILDSVPKGTEEKNLMAFERG 174
Cdd:PRK06274  157 LLpLSKESVLETIEAELPEKLREINLAAFELG 188
PRK05844 PRK05844
pyruvate flavodoxin oxidoreductase subunit gamma; Validated
 4-176 2.86e-05

pyruvate flavodoxin oxidoreductase subunit gamma; Validated


Pssm-ID: 180284 [Multi-domain]  Cd Length: 186  Bit Score: 42.45  E-value: 2.86e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436   4 EVRISGFGGQGIV-----LAGVILGRsaalydGKNAVQTQSYGPEARGGASKSEVVISEEEI-DYPKVIKPD-ILVCMSQ 76
Cdd:PRK05844    3 EIRWHSRAGQGAVtgakgLADVIAKT------GKEVQAFAFYGSAKRGAAMTAYNRIDDEPIlNHEKFMQPDyVLVIDPG 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438970436  77 QAF-DKYGRDIKDGGTVIVDRDLVTvpENFYNGNVKL-----YKIPFTDIAYKDIGlKIVANIVMLGALVRITGVVS--- 147
Cdd:PRK05844   77 LVFiENIFANEKEDTKYIITTHLSK--EELIEKKPELkgkkvFLVDCIKISMETIG-RPIPNTPMLGALMKVSGMLEida 153

                         170       180       190
                  ....*....|....*....|....*....|
gi 1438970436 148 -KESMKKAILDSVPKGTEEKNLMAFERGYN 176
Cdd:PRK05844  154 fKEAFKKVLGKKLPQKVIDANMLAIQRAYE 183
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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