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Conserved domains on  [gi|1364937568|gb|AVO64610|]
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Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, partial [Amarsipus carlsbergi]

Protein Classification

CCP domain-containing protein( domain architecture ID 13332024)

CCP domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA02927 super family cl33700
secreted complement-binding protein; Provisional
 24-199 1.24e-26

secreted complement-binding protein; Provisional


The actual alignment was detected with superfamily member PHA02927:

Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 103.96  E-value: 1.24e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568  24 CVPAECETPPSPEHGWVNVTDTSLGSMVRYTCEEGYELEGERVRQCVSGR----LWTNDAPICRPVSCGDPGAIANGTTH 99
Cdd:PHA02927   81 CIKRRCPSPRDIDNGQLDIGGVDFGSSITYSCNSGYQLIGESKSYCELGStgsmVWNPEAPICESVKCQSPPSISNGRHN 160

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568 100 GGAFVYPE--VLHYECSPGFVLKGSDTIAChADGKWNgQKPWCEPVSCGPPKVPSDVTFKG--KEYTYNNEIELSCQPGF 175
Cdd:PHA02927  161 GYEDFYTDgsVVTYSCNSGYSLIGNSGVLC-SGGEWS-DPPTCQIVKCPHPTISNGYLSSGfkRSYSYNDNVDFKCKYGY 238

                         170       180
                  ....*....|....*....|....
gi 1364937568 176 LLKGKSISVCQTDGTWSHDSPTCV 199
Cdd:PHA02927  239 KLSGSSSSTCSPGNTWQPELPKCV 262
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 203-247 1.67e-08

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


:

Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 49.77  E-value: 1.67e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1364937568 203 CGKPSPIPNGHMLGS--EFGFNSKVKYACDEGYTINGDSTLVCQSDG 247
Cdd:cd00033     1 CPPPPVPENGTVTGSkgSYSYGSTVTYSCNEGYTLVGSSTITCTENG 47
 
Name Accession Description Interval E-value
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 24-199 1.24e-26

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 103.96  E-value: 1.24e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568  24 CVPAECETPPSPEHGWVNVTDTSLGSMVRYTCEEGYELEGERVRQCVSGR----LWTNDAPICRPVSCGDPGAIANGTTH 99
Cdd:PHA02927   81 CIKRRCPSPRDIDNGQLDIGGVDFGSSITYSCNSGYQLIGESKSYCELGStgsmVWNPEAPICESVKCQSPPSISNGRHN 160

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568 100 GGAFVYPE--VLHYECSPGFVLKGSDTIAChADGKWNgQKPWCEPVSCGPPKVPSDVTFKG--KEYTYNNEIELSCQPGF 175
Cdd:PHA02927  161 GYEDFYTDgsVVTYSCNSGYSLIGNSGVLC-SGGEWS-DPPTCQIVKCPHPTISNGYLSSGfkRSYSYNDNVDFKCKYGY 238

                         170       180
                  ....*....|....*....|....
gi 1364937568 176 LLKGKSISVCQTDGTWSHDSPTCV 199
Cdd:PHA02927  239 KLSGSSSSTCSPGNTWQPELPKCV 262
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 29-82 2.55e-10

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 54.84  E-value: 2.55e-10
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1364937568   29 CETPPSPEHGWVNVTDT--SLGSMVRYTCEEGYELEGERVRQCVSGRLWTNDAPIC 82
Cdd:smart00032   1 CPPPPDIENGTVTSSSGtySYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 29-83 3.75e-10

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 54.39  E-value: 3.75e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1364937568  29 CETPPSPEHGWVNV--TDTSLGSMVRYTCEEGYELEGERVRQCVSGRLWTNDAPICR 83
Cdd:cd00033     1 CPPPPVPENGTVTGskGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 203-247 1.67e-08

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 49.77  E-value: 1.67e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1364937568 203 CGKPSPIPNGHMLGS--EFGFNSKVKYACDEGYTINGDSTLVCQSDG 247
Cdd:cd00033     1 CPPPPVPENGTVTGSkgSYSYGSTVTYSCNEGYTLVGSSTITCTENG 47
Sushi pfam00084
Sushi repeat (SCR repeat);
145-198 1.76e-08

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 49.81  E-value: 1.76e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1364937568 145 CGPPKVPS--DVTFKGKEYTYNNEIELSCQPGFLLKGKSISVCQTDGTWSHDSPTC 198
Cdd:pfam00084   1 CPPPPDIPngKVSATKNEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 203-247 1.98e-07

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 46.75  E-value: 1.98e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 1364937568  203 CGKPSPIPNGHMLGSE--FGFNSKVKYACDEGYTINGDSTLVCQSDG 247
Cdd:smart00032   1 CPPPPDIENGTVTSSSgtYSYGDTVTYSCDPGYTLIGSSTITCLENG 47
Sushi pfam00084
Sushi repeat (SCR repeat);
203-247 1.12e-06

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 44.80  E-value: 1.12e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1364937568 203 CGKPSPIPNG--HMLGSEFGFNSKVKYACDEGYTINGDSTLVCQSDG 247
Cdd:pfam00084   1 CPPPPDIPNGkvSATKNEYNYGASVSYECDPGYRLVGSPTITCQEDG 47
 
Name Accession Description Interval E-value
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 24-199 1.24e-26

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 103.96  E-value: 1.24e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568  24 CVPAECETPPSPEHGWVNVTDTSLGSMVRYTCEEGYELEGERVRQCVSGR----LWTNDAPICRPVSCGDPGAIANGTTH 99
Cdd:PHA02927   81 CIKRRCPSPRDIDNGQLDIGGVDFGSSITYSCNSGYQLIGESKSYCELGStgsmVWNPEAPICESVKCQSPPSISNGRHN 160

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568 100 GGAFVYPE--VLHYECSPGFVLKGSDTIAChADGKWNgQKPWCEPVSCGPPKVPSDVTFKG--KEYTYNNEIELSCQPGF 175
Cdd:PHA02927  161 GYEDFYTDgsVVTYSCNSGYSLIGNSGVLC-SGGEWS-DPPTCQIVKCPHPTISNGYLSSGfkRSYSYNDNVDFKCKYGY 238

                         170       180
                  ....*....|....*....|....
gi 1364937568 176 LLKGKSISVCQTDGTWSHDSPTCV 199
Cdd:PHA02927  239 KLSGSSSSTCSPGNTWQPELPKCV 262
PHA02639 PHA02639
EEV host range protein; Provisional
 29-199 4.78e-23

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 94.73  E-value: 4.78e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568  29 CETPPSPEHGWVN--VTDTSLGSMVRYTCEEGYELEGERVRQCVSGR---LWTNDAPICRPVSCGDPGAIANGTTHGGAF 103
Cdd:PHA02639   22 CDKPDDISNGFITelMEKYEIGKLIEYTCNTDYALIGDRFRTCIKDKnnaIWSNKAPFCMLKECNDPPSIINGKIYNKRE 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568 104 VYP--EVLHYECSP----GFVLKGSDTIACHADGKWNGQKPWCEPVSCGPPK--------VPSDvtfkgKEYTYNNEIEL 169
Cdd:PHA02639  102 MYKvgDEIYYVCNEhkgvQYSLVGNEKITCIQDKSWKPDPPICKMINCRFPAlqngyingIPSN-----KKFYYKTRVGF 176

                         170       180       190
                  ....*....|....*....|....*....|
gi 1364937568 170 SCQPGFLLKGKSISVCQTDGTWSHDSPTCV 199
Cdd:PHA02639  177 SCKSGFDLVGEKYSTCNINATWFPSIPTCV 206
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 24-243 9.88e-17

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 77.00  E-value: 9.88e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568  24 CVPAECETPPSPEH-------GWVNVTDTSLGSMVRYTCEEGYELE--GERVRQCvSGRLWT--NDapiCRPVSCGDPGA 92
Cdd:PHA02927   16 CVLSCCTIPSRPINmkfknsvETDANANYNIGDTIEYLCLPGYRKQkmGPIYAKC-TGTGWTlfNQ---CIKRRCPSPRD 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568  93 IANGTTHGGAFVYPEVLHYECSPGFVLKGSDTIACHADGK----WNGQKPWCEPVSCGPPKVPSDVTFKGKE--YTYNNE 166
Cdd:PHA02927   92 IDNGQLDIGGVDFGSSITYSCNSGYQLIGESKSYCELGSTgsmvWNPEAPICESVKCQSPPSISNGRHNGYEdfYTDGSV 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568 167 IELSCQPGFLLKGKSISVCqTDGTWShDSPTCVPARCGKPSpIPNGHM---LGSEFGFNSKVKYACDEGYTINGDSTLVC 243
Cdd:PHA02927  172 VTYSCNSGYSLIGNSGVLC-SGGEWS-DPPTCQIVKCPHPT-ISNGYLssgFKRSYSYNDNVDFKCKYGYKLSGSSSSTC 248
PHA02817 PHA02817
EEV Host range protein; Provisional
 82-199 1.08e-14

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 70.74  E-value: 1.08e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568  82 CRPVSCGDPGAIANGTTHGGAFVYP--EVLHYECSPG-----FVLKGSDTIACHADGKWNGQKPWCEPVSCGPPK----- 149
Cdd:PHA02817   19 CDLNKCCYPPSIKNGYIYNKKTEYNigSNVTFFCGNNtrgvrYTLVGEKNIICEKDGKWNKEFPVCKIIRCRFPAlqngf 98

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1364937568 150 ---VPSDvtfkgKEYTYNNEIELSCQPGFLLKGKSISVCQTDGTWSHDSPTCV 199
Cdd:PHA02817   99 vngIPDS-----KKFYYESEVSFSCKPGFVLIGTKYSVCGINSSWIPKVPICS 146
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 17-140 4.65e-13

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 66.99  E-value: 4.65e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568  17 WNGTAPSCVPAECETPPSPEHGWVNVTDT--SLGSMVRYTCEEGYELEGERVRQCvSGRLWTnDAPICRPVSCGDPgAIA 94
Cdd:PHA02927  136 WNPEAPICESVKCQSPPSISNGRHNGYEDfyTDGSVVTYSCNSGYSLIGNSGVLC-SGGEWS-DPPTCQIVKCPHP-TIS 212

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1364937568  95 NGTTHGG---AFVYPEVLHYECSPGFVLKGSDTIACHADGKWNGQKPWC 140
Cdd:PHA02927  213 NGYLSSGfkrSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQPELPKC 261
PHA02639 PHA02639
EEV host range protein; Provisional
 12-140 2.77e-11

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 61.99  E-value: 2.77e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568  12 QEDGSWNGTAPSCVPAECETPPSPEHGWV-NVTDT-SLGSMVRYTCEE----GYELEGERVRQCVSGRLWTNDAPICRPV 85
Cdd:PHA02639   68 KNNAIWSNKAPFCMLKECNDPPSIINGKIyNKREMyKVGDEIYYVCNEhkgvQYSLVGNEKITCIQDKSWKPDPPICKMI 147

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1364937568  86 SCGDPgAIANGTTHG----GAFVYPEVLHYECSPGFVLKGSDTIACHADGKWNGQKPWC 140
Cdd:PHA02639  148 NCRFP-ALQNGYINGipsnKKFYYKTRVGFSCKSGFDLVGEKYSTCNINATWFPSIPTC 205
PHA02831 PHA02831
EEV host range protein; Provisional
 14-165 3.76e-11

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 61.55  E-value: 3.76e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568  14 DGSWNgTAPSCV-PAECETPPSPEHGWV-NVTDT-SLGSMVRYTCE----EGYELEGERVRQCVSGRlWTNDAPICRPVS 86
Cdd:PHA02831   63 NGSWS-TKNMCIgKRNCKDPVTILNGYIkNKKDQySFGDSVTYACKvnklEKYSIVGNETVKCINKQ-WVPKYPVCKLIR 140

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568  87 CGDPgAIANG--TTHGGAFVYPEVLHYECSPGFVLKGSDTIACHADGKWNGQKPWCEPVSCGpPKVPSDVTFKGKEYTYN 164
Cdd:PHA02831  141 CKYP-ALQNGflNVFEKKFYYGDIVNFKCKKGFILLGSSVSTCDINSIWYPGIPKCVKDKVH-NEIQPNYLFDDLDEDFN 218


                  .
gi 1364937568 165 N 165
Cdd:PHA02831  219 N 219
PHA02817 PHA02817
EEV Host range protein; Provisional
 23-140 1.13e-10

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 59.57  E-value: 1.13e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568  23 SCVPAECETPPSPEHGWV--NVTDTSLGSMVRYTCEEG-----YELEGERVRQCVSGRLWTNDAPICRPVSCGDPgAIAN 95
Cdd:PHA02817   18 LCDLNKCCYPPSIKNGYIynKKTEYNIGSNVTFFCGNNtrgvrYTLVGEKNIICEKDGKWNKEFPVCKIIRCRFP-ALQN 96

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1364937568  96 GTTHG----GAFVYPEVLHYECSPGFVLKGSDTIACHADGKWNGQKPWC 140
Cdd:PHA02817   97 GFVNGipdsKKFYYESEVSFSCKPGFVLIGTKYSVCGINSSWIPKVPIC 145
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 29-82 2.55e-10

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 54.84  E-value: 2.55e-10
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1364937568   29 CETPPSPEHGWVNVTDT--SLGSMVRYTCEEGYELEGERVRQCVSGRLWTNDAPIC 82
Cdd:smart00032   1 CPPPPDIENGTVTSSSGtySYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 29-83 3.75e-10

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 54.39  E-value: 3.75e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1364937568  29 CETPPSPEHGWVNV--TDTSLGSMVRYTCEEGYELEGERVRQCVSGRLWTNDAPICR 83
Cdd:cd00033     1 CPPPPVPENGTVTGskGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 87-141 5.98e-10

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 53.62  E-value: 5.98e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1364937568  87 CGDPGAIANG--TTHGGAFVYPEVLHYECSPGFVLKGSDTIACHADGKWNGQKPWCE 141
Cdd:cd00033     1 CPPPPVPENGtvTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 145-199 5.98e-10

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 53.62  E-value: 5.98e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1364937568 145 CGPPKVPS--DVTFKGKEYTYNNEIELSCQPGFLLKGKSISVCQTDGTWSHDSPTCV 199
Cdd:cd00033     1 CPPPPVPEngTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 145-198 1.32e-09

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 52.91  E-value: 1.32e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1364937568  145 CGPPKVPS--DVTFKGKEYTYNNEIELSCQPGFLLKGKSISVCQTDGTWSHDSPTC 198
Cdd:smart00032   1 CPPPPDIEngTVTSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
PHA02954 PHA02954
EEV membrane glycoprotein; Provisional
 11-168 1.41e-09

EEV membrane glycoprotein; Provisional


Pssm-ID: 165263 [Multi-domain]  Cd Length: 317  Bit Score: 57.40  E-value: 1.41e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568  11 CQE---DGSWNGTApSCVPAECEtPPSPEHGWVNVTDT--SLGSMVRYTCEEGYELEGERVRQCVSGRlWtNDAPICRPv 85
Cdd:PHA02954  110 CEEkngNTSWNDTV-TCPNAECQ-PLQLEHGSCQPVKEkySFGEHITINCDVGYEVIGASYISCTANS-W-NVIPSCQQ- 184

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568  86 SCGDPgAIANGTTHGGAFVYPEVLHYECSPGFVLKGSDTIAChADGKWNGQKPWC-------EPVSCGPPKVPSDVTFKG 158
Cdd:PHA02954  185 KCDIP-SLSNGLISGSTFSIGGVIHLSCKSGFTLTGSPSSTC-IDGKWNPVLPICvrsneefDPVDDGPDDETDLSKLSK 262

                         170
                  ....*....|
gi 1364937568 159 KEYTYNNEIE 168
Cdd:PHA02954  263 DVVQYEQEIE 272
PHA02831 PHA02831
EEV host range protein; Provisional
 86-199 2.23e-09

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 56.54  E-value: 2.23e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568  86 SCGDPGAIANGTTHG--GAFVYPEVLHYECSPG----FVLKGSDTIAChADGKWNGQKPWCEPVSCGPPKVPSDV--TFK 157
Cdd:PHA02831   77 NCKDPVTILNGYIKNkkDQYSFGDSVTYACKVNklekYSIVGNETVKC-INKQWVPKYPVCKLIRCKYPALQNGFlnVFE 155

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1364937568 158 GKEYtYNNEIELSCQPGFLLKGKSISVCQTDGTWSHDSPTCV 199
Cdd:PHA02831  156 KKFY-YGDIVNFKCKKGFILLGSSVSTCDINSIWYPGIPKCV 196
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 87-140 4.37e-09

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 51.37  E-value: 4.37e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1364937568   87 CGDPGAIANG--TTHGGAFVYPEVLHYECSPGFVLKGSDTIACHADGKWNGQKPWC 140
Cdd:smart00032   1 CPPPPDIENGtvTSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 203-247 1.67e-08

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 49.77  E-value: 1.67e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1364937568 203 CGKPSPIPNGHMLGS--EFGFNSKVKYACDEGYTINGDSTLVCQSDG 247
Cdd:cd00033     1 CPPPPVPENGTVTGSkgSYSYGSTVTYSCNEGYTLVGSSTITCTENG 47
Sushi pfam00084
Sushi repeat (SCR repeat);
145-198 1.76e-08

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 49.81  E-value: 1.76e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1364937568 145 CGPPKVPS--DVTFKGKEYTYNNEIELSCQPGFLLKGKSISVCQTDGTWSHDSPTC 198
Cdd:pfam00084   1 CPPPPDIPngKVSATKNEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 203-247 1.98e-07

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 46.75  E-value: 1.98e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 1364937568  203 CGKPSPIPNGHMLGSE--FGFNSKVKYACDEGYTINGDSTLVCQSDG 247
Cdd:smart00032   1 CPPPPDIENGTVTSSSgtYSYGDTVTYSCDPGYTLIGSSTITCLENG 47
Sushi pfam00084
Sushi repeat (SCR repeat);
29-82 2.27e-07

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 46.72  E-value: 2.27e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1364937568  29 CETPPSPEHGWVNVTDTSL--GSMVRYTCEEGYELEGERVRQCVSGRLWTNDAPIC 82
Cdd:pfam00084   1 CPPPPDIPNGKVSATKNEYnyGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
87-140 1.04e-06

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 44.80  E-value: 1.04e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1364937568  87 CGDPGAIANG--TTHGGAFVYPEVLHYECSPGFVLKGSDTIACHADGKWNGQKPWC 140
Cdd:pfam00084   1 CPPPPDIPNGkvSATKNEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
203-247 1.12e-06

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 44.80  E-value: 1.12e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1364937568 203 CGKPSPIPNG--HMLGSEFGFNSKVKYACDEGYTINGDSTLVCQSDG 247
Cdd:pfam00084   1 CPPPPDIPNGkvSATKNEYNYGASVSYECDPGYRLVGSPTITCQEDG 47
PHA02817 PHA02817
EEV Host range protein; Provisional
 1-82 1.52e-06

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 47.63  E-value: 1.52e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568   1 YDLTSPTRLVCQEDGSWNGTAPSCVPAECETPpSPEHGWVNVTDTS----LGSMVRYTCEEGYELEGERVRQCVSGRLWT 76
Cdd:PHA02817   61 YTLVGEKNIICEKDGKWNKEFPVCKIIRCRFP-ALQNGFVNGIPDSkkfyYESEVSFSCKPGFVLIGTKYSVCGINSSWI 139


                  ....*.
gi 1364937568  77 NDAPIC 82
Cdd:PHA02817  140 PKVPIC 145
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 140-244 6.11e-06

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 46.18  E-value: 6.11e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568 140 CEPVSCGPPKVPSDVTFKGKEYTYNNE-------IELSCQPGFLLKGKSISVCQTDGTWSHDSPTCVPARCGKPSPIPNG 212
Cdd:PHA02927   16 CVLSCCTIPSRPINMKFKNSVETDANAnynigdtIEYLCLPGYRKQKMGPIYAKCTGTGWTLFNQCIKRRCPSPRDIDNG 95

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1364937568 213 HMLGSEFGFNSKVKYACDEGYTINGDSTLVCQ 244
Cdd:PHA02927   96 QLDIGGVDFGSSITYSCNSGYQLIGESKSYCE 127
PHA02817 PHA02817
EEV Host range protein; Provisional
 145-243 6.65e-06

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 45.70  E-value: 6.65e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568 145 CGPPKVPSDVTF-KGKEYTYNNEIELSCQPG-----FLLKGKSISVCQTDGTWSHDSPTCVPARCGKPSpIPNGHMLG-- 216
Cdd:PHA02817   25 CYPPSIKNGYIYnKKTEYNIGSNVTFFCGNNtrgvrYTLVGEKNIICEKDGKWNKEFPVCKIIRCRFPA-LQNGFVNGip 103

                          90       100
                  ....*....|....*....|....*....
gi 1364937568 217 --SEFGFNSKVKYACDEGYTINGDSTLVC 243
Cdd:PHA02817  104 dsKKFYYESEVSFSCKPGFVLIGTKYSVC 132
PHA02831 PHA02831
EEV host range protein; Provisional
 107-243 6.76e-05

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 43.06  E-value: 6.76e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568 107 EVLHYECSPGFvlkGSDTIACHaDGKWNGQKPWCEPVSCGPPKVPSDVTFKGKE--YTYNNEIELSCQPGFLLK----GK 180
Cdd:PHA02831   44 ENLEYKCNNNF---DKVFVTCN-NGSWSTKNMCIGKRNCKDPVTILNGYIKNKKdqYSFGDSVTYACKVNKLEKysivGN 119

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1364937568 181 SISVCqTDGTWSHDSPTCVPARCGKPSpIPNG--HMLGSEFGFNSKVKYACDEGYTINGDSTLVC 243
Cdd:PHA02831  120 ETVKC-INKQWVPKYPVCKLIRCKYPA-LQNGflNVFEKKFYYGDIVNFKCKKGFILLGSSVSTC 182
PHA02639 PHA02639
EEV host range protein; Provisional
 1-82 1.07e-04

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 42.73  E-value: 1.07e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568   1 YDLTSPTRLVCQEDGSWNGTAPSCVPAECETpPSPEHGWVNVTDTS----LGSMVRYTCEEGYELEGERVRQCVSGRLWT 76
Cdd:PHA02639  121 YSLVGNEKITCIQDKSWKPDPPICKMINCRF-PALQNGYINGIPSNkkfyYKTRVGFSCKSGFDLVGEKYSTCNINATWF 199


                  ....*.
gi 1364937568  77 NDAPIC 82
Cdd:PHA02639  200 PSIPTC 205
PHA02639 PHA02639
EEV host range protein; Provisional
 159-246 3.52e-04

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 41.19  E-value: 3.52e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568 159 KEYTYNNEIELSCQPGFLLKGKSISVC---QTDGTWSHDSPTCVPARCGKPSPIPNGHMLGSE--FGFNSKVKYACDE-- 231
Cdd:PHA02639   38 EKYEIGKLIEYTCNTDYALIGDRFRTCikdKNNAIWSNKAPFCMLKECNDPPSIINGKIYNKRemYKVGDEIYYVCNEhk 117

                          90
                  ....*....|....*..
gi 1364937568 232 --GYTINGDSTLVCQSD 246
Cdd:PHA02639  118 gvQYSLVGNEKITCIQD 134
PHA02954 PHA02954
EEV membrane glycoprotein; Provisional
 103-199 5.13e-04

EEV membrane glycoprotein; Provisional


Pssm-ID: 165263 [Multi-domain]  Cd Length: 317  Bit Score: 40.45  E-value: 5.13e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568 103 FVYPEVLHYECSPGFVLKGSDTIACHADgKWNgQKPWCEPvSCGPPKVpSDVTFKGKEYTYNNEIELSCQPGFLLKGKSI 182
Cdd:PHA02954  147 YSFGEHITINCDVGYEVIGASYISCTAN-SWN-VIPSCQQ-KCDIPSL-SNGLISGSTFSIGGVIHLSCKSGFTLTGSPS 222

                          90
                  ....*....|....*..
gi 1364937568 183 SVCqTDGTWSHDSPTCV 199
Cdd:PHA02954  223 STC-IDGKWNPVLPICV 238
PHA02954 PHA02954
EEV membrane glycoprotein; Provisional
 115-243 1.26e-03

EEV membrane glycoprotein; Provisional


Pssm-ID: 165263 [Multi-domain]  Cd Length: 317  Bit Score: 39.30  E-value: 1.26e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1364937568 115 PGFVLKGSDTIACHADGKW------NGQKPWCEPVSCGPPKVPSDVTFKG------KEYTYNNEIELSCQPGFLLKGKSI 182
Cdd:PHA02954   89 PLYEVNSTITLICKDETKYfrceekNGNTSWNDTVTCPNAECQPLQLEHGscqpvkEKYSFGEHITINCDVGYEVIGASY 168

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1364937568 183 SVCqTDGTWSHdSPTCvPARCGKPSpIPNGHMLGSEFGFNSKVKYACDEGYTINGDSTLVC 243
Cdd:PHA02954  169 ISC-TANSWNV-IPSC-QQKCDIPS-LSNGLISGSTFSIGGVIHLSCKSGFTLTGSPSSTC 225
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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