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preprotein translocase subunit SecY [Elizabethkingia anophelis]
Protein Classification
preprotein translocase subunit SecY ( domain architecture ID 11415179 )
preprotein translocase subunit SecY plays an essential role to facilitate protein translocation; it is a component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA
List of domain hits
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
4-449
4.52e-177
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 502.30
E-value: 4.52e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 4 FIQ TLKN IWSLE ELR NKLV FT FTLIL VYR FA S Y I SL P A I NM A EVGN L LQ vyqnqggs K Q AS GLLGLL SS F T GGA F SR A SI 83
Cdd:COG0201 1 MLS TLKN AFKIP ELR KRIL FT LGILI VYR LG S H I PV P G I DP A ALAQ L FA -------- Q Q SG GLLGLL NM F S GGA L SR F SI 72
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 84 M ALGIMPYI S ASII V QL MGMA IP Y L QK LQK D GE S GRK TLN Q I TR W LT IAVC L V QA PSYL gsitg L F L PYTQFSSAYY IDP 163
Cdd:COG0201 73 F ALGIMPYI T ASII M QL LTVV IP K L EE LQK E GE E GRK KIT Q Y TR Y LT VVLA L L QA FGIA ----- L G L RSGPPGGGLV IDP 147
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 164 n S I M F W L PSIVI L VT G SV F A MWLGE K IT DK GIGNGIS IL I MV GI L A D LP M A FIHE F QTQTG k G G L GTIII L VEVLFW L L V 243
Cdd:COG0201 148 - G I L F Y L LTVIT L TA G TM F L MWLGE Q IT ER GIGNGIS LI I FA GI V A R LP S A LAQI F ELVRT - G E L SILLL L LLLVLA L A V 225
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 244 I LLAIILSV A V R K IP I QY vsraq A RGG V S R NLME G ARQWI PLKVN A AGV M PIIFA QA L MFV P GLLTK - VDETNTF L AGFK 322
Cdd:COG0201 226 I AFVVFVEQ A Q R R IP V QY ----- A KRV V G R RMYG G QSTYL PLKVN M AGV I PIIFA SS L LLF P ATIAQ f FGGSSGW L QWIA 300
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 323 N VF S --- WQ Y N VL F A I LII I F SF FYTAIT IPVNQM AD D LK RN GG L IP KV RPGK E TA D YLD DI L SKI TL P GAIFL SIF A V L 399
Cdd:COG0201 301 N YL S pgs PL Y I VL Y A L LII F F TY FYTAIT FNPEEI AD N LK KS GG F IP GI RPGK P TA E YLD KV L TRL TL V GAIFL ALI A I L 380
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1345461323 400 P A I VHGTV vqtd RFALF FGGTSLLI L VGV V LDT VQ QI NTY LL NH HY D G LM 449
Cdd:COG0201 381 P E I LGAIT ---- GVPFY FGGTSLLI V VGV A LDT MK QI ESQ LL MR HY E G FL 426
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
4-449
4.52e-177
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 502.30
E-value: 4.52e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 4 FIQ TLKN IWSLE ELR NKLV FT FTLIL VYR FA S Y I SL P A I NM A EVGN L LQ vyqnqggs K Q AS GLLGLL SS F T GGA F SR A SI 83
Cdd:COG0201 1 MLS TLKN AFKIP ELR KRIL FT LGILI VYR LG S H I PV P G I DP A ALAQ L FA -------- Q Q SG GLLGLL NM F S GGA L SR F SI 72
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 84 M ALGIMPYI S ASII V QL MGMA IP Y L QK LQK D GE S GRK TLN Q I TR W LT IAVC L V QA PSYL gsitg L F L PYTQFSSAYY IDP 163
Cdd:COG0201 73 F ALGIMPYI T ASII M QL LTVV IP K L EE LQK E GE E GRK KIT Q Y TR Y LT VVLA L L QA FGIA ----- L G L RSGPPGGGLV IDP 147
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 164 n S I M F W L PSIVI L VT G SV F A MWLGE K IT DK GIGNGIS IL I MV GI L A D LP M A FIHE F QTQTG k G G L GTIII L VEVLFW L L V 243
Cdd:COG0201 148 - G I L F Y L LTVIT L TA G TM F L MWLGE Q IT ER GIGNGIS LI I FA GI V A R LP S A LAQI F ELVRT - G E L SILLL L LLLVLA L A V 225
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 244 I LLAIILSV A V R K IP I QY vsraq A RGG V S R NLME G ARQWI PLKVN A AGV M PIIFA QA L MFV P GLLTK - VDETNTF L AGFK 322
Cdd:COG0201 226 I AFVVFVEQ A Q R R IP V QY ----- A KRV V G R RMYG G QSTYL PLKVN M AGV I PIIFA SS L LLF P ATIAQ f FGGSSGW L QWIA 300
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 323 N VF S --- WQ Y N VL F A I LII I F SF FYTAIT IPVNQM AD D LK RN GG L IP KV RPGK E TA D YLD DI L SKI TL P GAIFL SIF A V L 399
Cdd:COG0201 301 N YL S pgs PL Y I VL Y A L LII F F TY FYTAIT FNPEEI AD N LK KS GG F IP GI RPGK P TA E YLD KV L TRL TL V GAIFL ALI A I L 380
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1345461323 400 P A I VHGTV vqtd RFALF FGGTSLLI L VGV V LDT VQ QI NTY LL NH HY D G LM 449
Cdd:COG0201 381 P E I LGAIT ---- GVPFY FGGTSLLI V VGV A LDT MK QI ESQ LL MR HY E G FL 426
SecY
pfam00344 SecY;
82-433
7.37e-111
SecY;
Pssm-ID: 459771
Cd Length: 322
Bit Score: 329.79
E-value: 7.37e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 82 S IM ALGIMPYI S ASII V QL M G MA I p Y L QK L Q K D GE S GRK TL NQ I TR W LT IAVC L V QA PSY lgsitglflpytqf SSAYYI 161
Cdd:pfam00344 1 S LF ALGIMPYI T ASII M QL L G VV I - S L EE L K K E GE E GRK KI NQ Y TR Y LT VVLA L I QA IGI -------------- VLSLGV 65
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 162 DPNSIM F W L PSIVI L VT G SV F A MWLGE K IT DK GIGNGIS IL I MV GI L A D LP M AF IHEFQTQTGK G GLGTIII L VEVLFW L 241
Cdd:pfam00344 66 YGGGGG F Y L LIVLQ L TA G TM F L MWLGE Q IT KY GIGNGIS LI I FA GI V A R LP S AF SGALIALFRL G ARSILPN L LLLIIT L 145
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 242 L VI L L AII L SV A V R K IP I QY VS R AQA rggvsrnlme G ARQWI PLK V N A AGV M PIIFA QA L MFV P GLLTKV d ETNT F L A GF 321
Cdd:pfam00344 146 A VI A L VVY L QQ A E R R IP V QY AK R VVG ---------- G QSSYL PLK L N Y AGV I PIIFA SS L LSF P ATIAQF - FGLQ F I A AA 214
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 322 KNVF S WQ Y N VL F A I LII I F SF FYTAIT IPVNQM A DD LK RN GG L IP KV RPGK E TA D YLD DILSK ITL P GA I FL S I F AVLP A 401
Cdd:pfam00344 215 LDPG S PL Y T VL Y A L LII F F AY FYTAIT FNPKDI A EN LK KQ GG F IP GI RPGK P TA K YLD RVIPR ITL L GA L FL G I I AVLP D 294
330 340 350
....*....|....*....|....*....|..
gi 1345461323 402 IVHGTVVQT drfa LF FGGTSLLI L VGV V LDT V 433
Cdd:pfam00344 295 LLGALTGVP ---- FG FGGTSLLI V VGV A LDT Y 322
3a0501s007
TIGR00967 preprotein translocase, SecY subunit; Members of this protein family are the SecY component of ...
18-445
1.32e-89
preprotein translocase, SecY subunit; Members of this protein family are the SecY component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA. This model does not discriminate bacterial from archaeal forms. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273369
Cd Length: 410
Bit Score: 278.40
E-value: 1.32e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 18 R N KL V FT FT L ILVY R FASY I SL P A I N maevgnllqv YQNQGGSK Q ASGLL GLL SS F T GGA FSRA SI M ALGI M PYI S ASII 97
Cdd:TIGR00967 1 R E KL L FT LG L LVLF R IGTF I PI P G I D ---------- ASAFQNLI Q QNPIF GLL NT F S GGA LGQI SI F ALGI S PYI T ASII 70
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 98 V QL MGMAI P Y L QK LQ - K D GE S GR KTL NQ I TR W LT IAVCLV Q A psylgsitglf L PYTQFSSAY Y IDPNSIM F W L PSIVI L 176
Cdd:TIGR00967 71 I QL LTGDV P P L LQ LQ k K E GE I GR RKI NQ L TR Y LT LILAFI Q S ----------- L GIVMTGMYG Y VGDPGAF F Y L LIVIQ L 139
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 177 V TGS VFA MWLGE K IT DK GIGNGIS I LI MV GI L A DL P MAFIH - EFQT Q TGKGG L GTIIILVEV L FW L LVILLAIILS V --- 252
Cdd:TIGR00967 140 T TGS MIV MWLGE Q IT KY GIGNGIS L LI FA GI A A TI P SGLLQ p TEVR Q SKVRD L ISFLQNLPF L LY L IATIIVFAVV V fvq 219
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 253 - A V RKIPIQ YVS R AQA R G G vsrnlme GARQWI PLK V N A AGV M P I IFA Q AL MFV P GLLTKVDET N TFL A G F K N VF ------ 325
Cdd:TIGR00967 220 q A R RKIPIQ SAK R QGG R R G ------- SQSTYL PLK L N Y AGV I P V IFA S AL LSN P ATISQFLNS N QGG A W F L N PI lslsls 292
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 326 SWQYNV L FA ILII I FSFFY TAITIPVNQ MA DD LK RN G GL IP KV RPGK E T AD YL DDILSKI T LP G AI FL SIF A V LP AIV h G 405
Cdd:TIGR00967 293 DPIGAI L YL ILII F FSFFY VELQLNPED MA KN LK KQ G MF IP GI RPGK M T EK YL KRVIPRL T FV G SL FL GLI A L LP NFL - G 371
410 420 430 440
....*....|....*....|....*....|....*....|
gi 1345461323 406 TVVQT d RFALFF GGTSLLI L VGV VL DT VQ Q INTY L LNHH Y 445
Cdd:TIGR00967 372 AIGGL - PTSKGL GGTSLLI V VGV AI DT YK Q LESE L ISRN Y 410
secY
CHL00161 preprotein translocase subunit SecY; Validated
15-450
7.13e-87
preprotein translocase subunit SecY; Validated
Pssm-ID: 214379
Cd Length: 417
Bit Score: 271.87
E-value: 7.13e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 15 E EL R N K L V FT FT L I L VY R FASY I SL P A I NM aev GN L LQVYQ N qggskqa SG LL G LL SS F T GG A F SRASIM ALGI M PYI S A 94
Cdd:CHL00161 8 D EL L N R L L FT LG L L L LI R LGTF I PV P G I DH --- TQ L YPSLS N ------- NP LL N LL NT F S GG G F FVIGLF ALGI L PYI N A 77
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 95 SII V QL MGMA IP Y L Q KLQK D - GE S GR KTL NQ I TR W LT IAVCLV Q apsyl GSITGLF L pytqfs SA Y YIDP N s IMFW L PSI 173
Cdd:CHL00161 78 SII I QL LTSI IP S L E KLQK E e GE A GR RKI NQ Y TR Y LT LGWAII Q ----- SIGISFW L ------ KP Y LFNW N - LLLA L EIV 145
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 174 VI L VT GS VFAM WL G E K IT D KG I GNG I S I LI MVG I LAD LP MAFIHEFQTQTGKGGLGT I II L VEVL F wl LVILLA I I L SV A 253
Cdd:CHL00161 146 LA L TS GS MIVL WL S E L IT E KG L GNG S S L LI FFN I VSN LP KLLQSLLFSLSANITILS I LL L LFLF F -- ITLIGI I F L QE A 223
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 254 V RKIP I qy V S RA Q argg VSRNLMEGARQWI PL KV N A AGVMPIIFA Q AL MFV PG L LT KVDETNTF L AG ----- FKNV F SWQ 328
Cdd:CHL00161 224 I RKIP L -- I S AK Q ---- LGKSSRLASNSYL PL RL N Q AGVMPIIFA S AL LVL PG Y LT NILLNQFL L PL lslfl QLAS F KIL 297
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 329 Y N VL FAI LI II FS F FY TA I TIPVNQMADD L KRNGGL IP KV RPGK E T AD YL DDI L SKI TL P GA I FL SIF A V LP AIV h GT V V 408
Cdd:CHL00161 298 Y L VL YFV LI LF FS Y FY ST I VLNPKDISEN L QKMAVS IP GI RPGK A T TK YL KKT L NRL TL L GA L FL AFI A L LP NLI - ES V L 376
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 1345461323 409 QTDR F A l FF G G TSLLILVGV VL DT VQ QI N TYL LNHH Y DGLMQ 450
Cdd:CHL00161 377 NLSV F K - GL G T TSLLILVGV AI DT SR QI Q TYL ISNN Y ENMYD 417
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
4-449
4.52e-177
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 502.30
E-value: 4.52e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 4 FIQ TLKN IWSLE ELR NKLV FT FTLIL VYR FA S Y I SL P A I NM A EVGN L LQ vyqnqggs K Q AS GLLGLL SS F T GGA F SR A SI 83
Cdd:COG0201 1 MLS TLKN AFKIP ELR KRIL FT LGILI VYR LG S H I PV P G I DP A ALAQ L FA -------- Q Q SG GLLGLL NM F S GGA L SR F SI 72
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 84 M ALGIMPYI S ASII V QL MGMA IP Y L QK LQK D GE S GRK TLN Q I TR W LT IAVC L V QA PSYL gsitg L F L PYTQFSSAYY IDP 163
Cdd:COG0201 73 F ALGIMPYI T ASII M QL LTVV IP K L EE LQK E GE E GRK KIT Q Y TR Y LT VVLA L L QA FGIA ----- L G L RSGPPGGGLV IDP 147
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 164 n S I M F W L PSIVI L VT G SV F A MWLGE K IT DK GIGNGIS IL I MV GI L A D LP M A FIHE F QTQTG k G G L GTIII L VEVLFW L L V 243
Cdd:COG0201 148 - G I L F Y L LTVIT L TA G TM F L MWLGE Q IT ER GIGNGIS LI I FA GI V A R LP S A LAQI F ELVRT - G E L SILLL L LLLVLA L A V 225
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 244 I LLAIILSV A V R K IP I QY vsraq A RGG V S R NLME G ARQWI PLKVN A AGV M PIIFA QA L MFV P GLLTK - VDETNTF L AGFK 322
Cdd:COG0201 226 I AFVVFVEQ A Q R R IP V QY ----- A KRV V G R RMYG G QSTYL PLKVN M AGV I PIIFA SS L LLF P ATIAQ f FGGSSGW L QWIA 300
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 323 N VF S --- WQ Y N VL F A I LII I F SF FYTAIT IPVNQM AD D LK RN GG L IP KV RPGK E TA D YLD DI L SKI TL P GAIFL SIF A V L 399
Cdd:COG0201 301 N YL S pgs PL Y I VL Y A L LII F F TY FYTAIT FNPEEI AD N LK KS GG F IP GI RPGK P TA E YLD KV L TRL TL V GAIFL ALI A I L 380
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1345461323 400 P A I VHGTV vqtd RFALF FGGTSLLI L VGV V LDT VQ QI NTY LL NH HY D G LM 449
Cdd:COG0201 381 P E I LGAIT ---- GVPFY FGGTSLLI V VGV A LDT MK QI ESQ LL MR HY E G FL 426
SecY
pfam00344 SecY;
82-433
7.37e-111
SecY;
Pssm-ID: 459771
Cd Length: 322
Bit Score: 329.79
E-value: 7.37e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 82 S IM ALGIMPYI S ASII V QL M G MA I p Y L QK L Q K D GE S GRK TL NQ I TR W LT IAVC L V QA PSY lgsitglflpytqf SSAYYI 161
Cdd:pfam00344 1 S LF ALGIMPYI T ASII M QL L G VV I - S L EE L K K E GE E GRK KI NQ Y TR Y LT VVLA L I QA IGI -------------- VLSLGV 65
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 162 DPNSIM F W L PSIVI L VT G SV F A MWLGE K IT DK GIGNGIS IL I MV GI L A D LP M AF IHEFQTQTGK G GLGTIII L VEVLFW L 241
Cdd:pfam00344 66 YGGGGG F Y L LIVLQ L TA G TM F L MWLGE Q IT KY GIGNGIS LI I FA GI V A R LP S AF SGALIALFRL G ARSILPN L LLLIIT L 145
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 242 L VI L L AII L SV A V R K IP I QY VS R AQA rggvsrnlme G ARQWI PLK V N A AGV M PIIFA QA L MFV P GLLTKV d ETNT F L A GF 321
Cdd:pfam00344 146 A VI A L VVY L QQ A E R R IP V QY AK R VVG ---------- G QSSYL PLK L N Y AGV I PIIFA SS L LSF P ATIAQF - FGLQ F I A AA 214
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 322 KNVF S WQ Y N VL F A I LII I F SF FYTAIT IPVNQM A DD LK RN GG L IP KV RPGK E TA D YLD DILSK ITL P GA I FL S I F AVLP A 401
Cdd:pfam00344 215 LDPG S PL Y T VL Y A L LII F F AY FYTAIT FNPKDI A EN LK KQ GG F IP GI RPGK P TA K YLD RVIPR ITL L GA L FL G I I AVLP D 294
330 340 350
....*....|....*....|....*....|..
gi 1345461323 402 IVHGTVVQT drfa LF FGGTSLLI L VGV V LDT V 433
Cdd:pfam00344 295 LLGALTGVP ---- FG FGGTSLLI V VGV A LDT Y 322
3a0501s007
TIGR00967 preprotein translocase, SecY subunit; Members of this protein family are the SecY component of ...
18-445
1.32e-89
preprotein translocase, SecY subunit; Members of this protein family are the SecY component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA. This model does not discriminate bacterial from archaeal forms. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273369
Cd Length: 410
Bit Score: 278.40
E-value: 1.32e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 18 R N KL V FT FT L ILVY R FASY I SL P A I N maevgnllqv YQNQGGSK Q ASGLL GLL SS F T GGA FSRA SI M ALGI M PYI S ASII 97
Cdd:TIGR00967 1 R E KL L FT LG L LVLF R IGTF I PI P G I D ---------- ASAFQNLI Q QNPIF GLL NT F S GGA LGQI SI F ALGI S PYI T ASII 70
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 98 V QL MGMAI P Y L QK LQ - K D GE S GR KTL NQ I TR W LT IAVCLV Q A psylgsitglf L PYTQFSSAY Y IDPNSIM F W L PSIVI L 176
Cdd:TIGR00967 71 I QL LTGDV P P L LQ LQ k K E GE I GR RKI NQ L TR Y LT LILAFI Q S ----------- L GIVMTGMYG Y VGDPGAF F Y L LIVIQ L 139
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 177 V TGS VFA MWLGE K IT DK GIGNGIS I LI MV GI L A DL P MAFIH - EFQT Q TGKGG L GTIIILVEV L FW L LVILLAIILS V --- 252
Cdd:TIGR00967 140 T TGS MIV MWLGE Q IT KY GIGNGIS L LI FA GI A A TI P SGLLQ p TEVR Q SKVRD L ISFLQNLPF L LY L IATIIVFAVV V fvq 219
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 253 - A V RKIPIQ YVS R AQA R G G vsrnlme GARQWI PLK V N A AGV M P I IFA Q AL MFV P GLLTKVDET N TFL A G F K N VF ------ 325
Cdd:TIGR00967 220 q A R RKIPIQ SAK R QGG R R G ------- SQSTYL PLK L N Y AGV I P V IFA S AL LSN P ATISQFLNS N QGG A W F L N PI lslsls 292
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 326 SWQYNV L FA ILII I FSFFY TAITIPVNQ MA DD LK RN G GL IP KV RPGK E T AD YL DDILSKI T LP G AI FL SIF A V LP AIV h G 405
Cdd:TIGR00967 293 DPIGAI L YL ILII F FSFFY VELQLNPED MA KN LK KQ G MF IP GI RPGK M T EK YL KRVIPRL T FV G SL FL GLI A L LP NFL - G 371
410 420 430 440
....*....|....*....|....*....|....*....|
gi 1345461323 406 TVVQT d RFALFF GGTSLLI L VGV VL DT VQ Q INTY L LNHH Y 445
Cdd:TIGR00967 372 AIGGL - PTSKGL GGTSLLI V VGV AI DT YK Q LESE L ISRN Y 410
secY
CHL00161 preprotein translocase subunit SecY; Validated
15-450
7.13e-87
preprotein translocase subunit SecY; Validated
Pssm-ID: 214379
Cd Length: 417
Bit Score: 271.87
E-value: 7.13e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 15 E EL R N K L V FT FT L I L VY R FASY I SL P A I NM aev GN L LQVYQ N qggskqa SG LL G LL SS F T GG A F SRASIM ALGI M PYI S A 94
Cdd:CHL00161 8 D EL L N R L L FT LG L L L LI R LGTF I PV P G I DH --- TQ L YPSLS N ------- NP LL N LL NT F S GG G F FVIGLF ALGI L PYI N A 77
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 95 SII V QL MGMA IP Y L Q KLQK D - GE S GR KTL NQ I TR W LT IAVCLV Q apsyl GSITGLF L pytqfs SA Y YIDP N s IMFW L PSI 173
Cdd:CHL00161 78 SII I QL LTSI IP S L E KLQK E e GE A GR RKI NQ Y TR Y LT LGWAII Q ----- SIGISFW L ------ KP Y LFNW N - LLLA L EIV 145
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 174 VI L VT GS VFAM WL G E K IT D KG I GNG I S I LI MVG I LAD LP MAFIHEFQTQTGKGGLGT I II L VEVL F wl LVILLA I I L SV A 253
Cdd:CHL00161 146 LA L TS GS MIVL WL S E L IT E KG L GNG S S L LI FFN I VSN LP KLLQSLLFSLSANITILS I LL L LFLF F -- ITLIGI I F L QE A 223
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 254 V RKIP I qy V S RA Q argg VSRNLMEGARQWI PL KV N A AGVMPIIFA Q AL MFV PG L LT KVDETNTF L AG ----- FKNV F SWQ 328
Cdd:CHL00161 224 I RKIP L -- I S AK Q ---- LGKSSRLASNSYL PL RL N Q AGVMPIIFA S AL LVL PG Y LT NILLNQFL L PL lslfl QLAS F KIL 297
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 329 Y N VL FAI LI II FS F FY TA I TIPVNQMADD L KRNGGL IP KV RPGK E T AD YL DDI L SKI TL P GA I FL SIF A V LP AIV h GT V V 408
Cdd:CHL00161 298 Y L VL YFV LI LF FS Y FY ST I VLNPKDISEN L QKMAVS IP GI RPGK A T TK YL KKT L NRL TL L GA L FL AFI A L LP NLI - ES V L 376
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 1345461323 409 QTDR F A l FF G G TSLLILVGV VL DT VQ QI N TYL LNHH Y DGLMQ 450
Cdd:CHL00161 377 NLSV F K - GL G T TSLLILVGV AI DT SR QI Q TYL ISNN Y ENMYD 417
secY
PRK12417 preprotein translocase subunit SecY; Reviewed
1-445
1.74e-27
preprotein translocase subunit SecY; Reviewed
Pssm-ID: 237095
Cd Length: 404
Bit Score: 113.55
E-value: 1.74e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 1 MK GFIQTLKN I wslee LRN K LV FT FTLILV Y RFA S Y IS L P AINMAEVGN llqvyqnqggsk QASGL L GLLSSF TGG AFSR 80
Cdd:PRK12417 1 MK LLKKFEYK I ----- IYK K IL FT CFILFI Y ILG S N IS I P FVSYNDMLG ------------ GHESF L KIAAAN TGG DLRT 63
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 81 AS I MA LG IM P YISAS II V QL M gmaip YLQ K LQKDGESGRKTLNQIT R W LT IAVCLV Q ap S YLGSIT glf LP YTQFS S A yy 160
Cdd:PRK12417 64 LN I FS LG LG P WMTSM II L QL F ----- SYR K RDGLMKQTIEEQHYRE R I LT LIIAVI Q -- S LAVILS --- LP SKERI S Q -- 131
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 161 idpn SIMFWL ps IV ILVTG SV F AM WL GEKITDK GIG n G ISILIM V GILADL P --- MAF I HEFQTQTGKGG L GT II I L VEV 237
Cdd:PRK12417 132 ---- TNILLN -- TL ILVTG TM F LV WL SDLNARY GIG - G PMPIVL V SMIKSI P qdv IEY I DASHIVIILLI L LV II T L FFL 204
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 238 L F wllvillaii LSVAVRK IP IQYVSR aqargg VS R NL M ega RQWIPL K V N A AG V MPI IFAQA L MFV P G ---- L LTKVDE 313
Cdd:PRK12417 205 Y F ---------- IELVEYR IP YNDIMN ------ HN R FK M --- YSYLSI K L N P AG G MPI MYSMS L LVF P Q yiii L ILSIFP 265
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 314 T N TFLAGFKNVF S W --- QYNVLFA IL IIIF S F F YTAIT I PVN Q M A D D LKRN G GL IP K V R PGK E T AD YL DD I LSKITLP GA 390
Cdd:PRK12417 266 N N SGISADMDML S F gsp LGVTVYL IL QFLL S Y F FSFVN I NTK Q I A K D MLKS G NY IP G V Y PGK D T ER YL NY I ARRFSWF GA 345
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 1345461323 391 I F LSIF A VL P AIVHGTVVQTDRFAL F F G gt SLLIL VG VVLDTVQQ I NTY L LNHH Y 445
Cdd:PRK12417 346 L F VTVI A GI P LYFTLFDPHLSTEIY F S G -- QFMMF VG MSFNIADE I RAL L YFDK Y 398
acc_sec_Y2
TIGR02920 accessory Sec system translocase SecY2; Members of this family are restricted to the ...
20-449
6.54e-24
accessory Sec system translocase SecY2; Members of this family are restricted to the Firmicutes lineage (low-GC Gram-positive bacteria) and appear to be paralogous to, and much more divergent than, the preprotein translocase SecY. Members include the SecY2 protein of the accessory Sec system in Streptococcus gordonii, involved in export of the highly glycosylated platelet-binding protein GspB. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 131966
Cd Length: 395
Bit Score: 102.89
E-value: 6.54e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 20 K LV FT FTLILV Y RFA SYI SL P AINMA evgnllqv Y Q NQG G S K QA sg LLGLLSSF TGG AFSRA SI MA LG IM P YISAS II V Q 99
Cdd:TIGR02920 5 K IL FT CFILII Y VLG SYI PI P FVEVS -------- K Q DME G V K NS -- FFKIAIAN TGG NLTTL SI FS LG LG P WMTSM II L Q 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 100 L mgma IPYLQKLQK D GE S g R K TLNQIT R W LT IAVCLV Q apsylgsit GL FLPYTQFSSAYYI D P N SIM fwlp SIV ILVTG 179
Cdd:TIGR02920 75 L ---- FSFTKSDGF D AQ S - P K EQQYRE R F LT LIIAII Q --------- GL AIIHSFTNKNGLS D F N MLL ---- ATL ILVTG 136
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 180 SVFAM WL GEKITDK GIG n G ISILIM V GI L ADL P MAFIHE FQ TQTGKGGLGT I IILVEV LF W L LV I LL A iilsvavr KIP I 259
Cdd:TIGR02920 137 TCLLV WL ADLNAKY GIG - G SMPIVL V SM L KNI P SNVFEL FQ MSYIWLIALL I LLTLVA LF L L AF I ER A -------- EYR I 207
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 260 QYVS raqa RGGVS R NLME gar QWI P L K V N A AG V M PIIFAQA L MFV P G ---- LL TKVDETNTFLAGFKNV FS W --- QYNVL 332
Cdd:TIGR02920 208 PVND ---- ISLHN R SNLM --- SYL P I K L N P AG G M MYMYVMS L LML P Q yiii LL GRIFPNSSLINNWVFQ FS F ssp VGILI 280
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 333 FA IL IIIF S F F Y T AIT I PVNQMADDLKRN G GL IP KVR PGK E T AD YL DDILSKITLP G AI F LSIFAVL P AIVHGT V VQTDR 412
Cdd:TIGR02920 281 YL IL QMLL S Y F F T FVN I NPKEISKSFRKS G NY IP GIA PGK D T QR YL NRLARRFCWF G GV F NAFQLGI P LYFALF V PHLLT 360
410 420 430
....*....|....*....|....*....|....*..
gi 1345461323 413 F A LFF G gt SLLILV G VVLDTVQQ I N T Y L LNHH Y DG L M 449
Cdd:TIGR02920 361 E A YIP G -- QFMMIT G MSFNIADE I R T I L YFDR Y KP L L 395
PRK08568
PRK08568 preprotein translocase subunit SecY; Reviewed
17-430
3.15e-10
preprotein translocase subunit SecY; Reviewed
Pssm-ID: 236293
Cd Length: 462
Bit Score: 61.78
E-value: 3.15e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 17 LRN KL VF T FTLILV Y RFASY I S L painmaevgnllqvyqn Q G G S KQASG L LG LL SSFTG G A F sr ASIMA LGI M P YIS A S I 96
Cdd:PRK08568 26 FKE KL KW T AIVLIL Y FILTN I P L ----------------- Y G I S QSSQD L FE LL RIIFA G S F -- GTLLQ LGI G P IVT A G I 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 97 I V QL MGMA ip Y L QK L QKDGESG R KTLNQITRW L T I AVCLVQ A PSYLGS it G L F L P Y T QFS S AYYI dpn SIMFW L P sivi L 176
Cdd:PRK08568 87 I L QL LVGS -- K L IN L DLSDPED R ALFQGLQKL L A I VMIALE A APFVLA -- G A F G P A T GLA S TPLL --- ALLIF L Q ---- L 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 177 VT G SVFAMW L G E KITDK GIG N GIS IL I -------- M VG ILAD L PM ---------- A FIHEFQTQTGKGG ----------- 227
Cdd:PRK08568 156 FL G GILIIL L D E LVSKW GIG S GIS LF I lagvsqti F VG LFNW L TG gqglpvgfip A LFSAITSGNLTLA lllttrgllll 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 228 -- LG TI I I LVE V LF wllvillai IL S VA V R k IP iqy V S RAQA RG GVS R nlmegarqw I PLK VNAAG V M P I I FAQ AL M --- 302
Cdd:PRK08568 236 gl IT TI V I FLI V VY --------- LE S MR V E - IP --- L S HGRV RG ARG R --------- Y PLK FIYVS V L P V I LVR AL Q ani 293
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 303 --------- FVPGL L TKV D ETN -------- TF L AGFKNVFS W Q -------- Y NVLFAI L I I I F SF F YTAI T - IPVNQM A D 356
Cdd:PRK08568 294 qlfgqllqr LGIPI L GTY D SSG aspisgla YY L SPPHSPYD W I qdplraii Y ALFMIV L S I L F AI F WVET T g LDPKTQ A R 373
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1345461323 357 D L KRN G GL IP KV R PG - K ETADY L DDILSKI T LP G AIFLSIF AVL PAIV h G TVV qtdrfalff GGT S LL IL V GV V L 430
Cdd:PRK08568 374 Q L QNS G MQ IP GF R RN p K VIEKV L ERYIPPV T VI G GAIVGLL AVL ADLL - G ALG --------- GGT G LL LT V SI V Y 438
PTZ00219
PTZ00219 Sec61 alpha subunit; Provisional
77-239
2.37e-04
Sec61 alpha subunit; Provisional
Pssm-ID: 185519 [Multi-domain]
Cd Length: 474
Bit Score: 43.46
E-value: 2.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 77 A FS R ASI M A LGI M P YISA S IIV QL MGMA -- I PYL Q KLQK D gesg R KTLNQITRW L TIAVC L VQ A PS Y L gsitglflpytq 154
Cdd:PTZ00219 72 A SN R GTL M E LGI S P IVTS S MVM QL LAGS ki I DVD Q NNKE D ---- R ALFEGAQKL L GLLIT L GE A VA Y V ------------ 135
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345461323 155 f S S AY Y I D PNS I MFWLPSIV I -- L VTGSVFAMW L G E KITDK - G I G N GIS IL I MVG I LADLPMAFIHEFQTQ TG K G GL -- G 229
Cdd:PTZ00219 136 - W S GM Y G D ISE I GAGNAILI I lq L FFAGIVVIL L D E LLQKG y G L G S GIS LF I ATN I CETIIWKAFSPTTIN TG R G TE fe G 214
170
....*....|
gi 1345461323 230 T II I L VEV LF 239
Cdd:PTZ00219 215 A II A L FHL LF 224
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
