|
Name |
Accession |
Description |
Interval |
E-value |
| Zn_piracy_ZnuD |
NF038289 |
zinc piracy TonB-dependent receptor ZnuD; ZnuD, as described in Acinetobacter baumannii, works ... |
3-691 |
0e+00 |
|
zinc piracy TonB-dependent receptor ZnuD; ZnuD, as described in Acinetobacter baumannii, works with the zinc uptake transporter ZnuABC to overcome sequestration of zinc by the host. ZnuD, TonB-dependent receptor, pirates zinc from the host protein calprotectin. A similar ZnuD family protein, outside the current scope of this model, has been characterized in Neisseria.
Pssm-ID: 468454 [Multi-domain] Cd Length: 684 Bit Score: 1411.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 3 FYKNILTLSILAAISVPVFAAESENVEKLETIRIKAHPLEQTSQDFAVADTVVDQKHLSQGAATIGDALSSEVGIYANQF 82
Cdd:NF038289 2 FHKNLLTLSILAVISPSVFAQENEPVQQLETIQIQAHPLVQTAADFAVADHVVDQKQLSQGATTIGDALADELGVYSNQF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 83 GAGSSRPVIRGQDGPRVKVLQNSSENIDVSTLSPDHAVIVDPVLAKQVEVIRGPSTLLFGAGTVGGLVNVIDNKIPTQMP 162
Cdd:NF038289 82 GAGSSRPVIRGQDGARVKVLQNASETMDVSTLSPDHAVTVDPILAKQVEVIRGPSTLLYGAGTVGGLVNVTDSKIPTQMP 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 163 ENGYEGQVGLRYNTGSDEKLASAGVTVGLGSQVALRVEGLTRDANNYIAPNYIHEGE--KERRVDNTFAQGDSVNVGLSW 240
Cdd:NF038289 162 EKGYEGQVGLRYNTGSDEKLASAGVTVGLGDQVALRVEGLKRDANDYIAPDYLHEGEftKERRVDNTFAESQTVNVGLSW 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 241 IYDRGYTGISYSNRRDQYGLPGHSHEYESCSAHLggrPHLHCGDHEHEEGEETHDHEHEEHEHEhggPWIDLKSERYDFK 320
Cdd:NF038289 242 IYDRGFTGISYSNRQDQYGLPGHSHEYESCHPHG---PHLHCGSHDHGDDEGHHHHDHEHDHAG---PWIDLKSERYDFR 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 321 TELNDPFAGFQKLRAQASYTDYQHDEIEEGAIATRFQNKGYDGRIELVHNPIASWEGVIGAQLGQQKLDLTGEEAFMAPT 400
Cdd:NF038289 316 TELNDPFAGFKKLRAQASYTDYQHDEIEEDEIATTFKSKGYDGRLELVHNPIAGWEGVIGTQYSQQKLNLTGEEAFMAPN 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 401 TTKKWSVFALEHKQWKDVHFELSARADQQEIDVDdNSKQDFDGSAFSYAGAANWEFVPNYKLSFVASHQERLPLAQELYA 480
Cdd:NF038289 396 TTKKWSLFALEHKQWNDVHVELAARVDQQKIDID-STQKDYDGTAFSYSGAANWEFAPNYKLSLVASHQERLPLAQELYA 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 481 NGGHFATNTYELGNDQLSKEKSNNVELGLHFDNNKLDYHLHVYHNWFDDYIYAQTLDRYKDFRLVQYTQDKARFYGAEGE 560
Cdd:NF038289 475 DGKHFATNTYELGNDNLDKEKSNNLELGLHYDNDKLDYHVHVYHNWFDDYIYAQTLDRYEDFRLVQYTQDKARFYGAEAE 554
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 561 IGYQITPMYKISAFGDYVRGKIDAEgNAPRIPAGRLGTKVDADFGDGFSGSAEYYHVFNQDKIAAYETETEGYNMLNLGV 640
Cdd:NF038289 555 AGYQISPRYKLSVFGDYVRGKIDNE-NAPRVPAGRLGTKVNADFGDGWSGSAEYYHVFNQDKIAAYETETQGYNMLNLGL 633
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|.
gi 1335750474 641 AYSGQYGAKTDYRVYMKANNLLDDTVYQHASFLSNIPQVGRNFTVGVDFSF 691
Cdd:NF038289 634 AYAGQYSNKTDYRVYFKANNLLDDQVYQHASFLSNIPQVGRNFTVGVDFSF 684
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
31-675 |
1.03e-70 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 242.43 E-value: 1.03e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 31 LETIRIKAHPLEQTSQDFAVADTVVDQKHL-SQGAATIGDALSSEVGIYANQFGAGSSRPVIRGQDG--PRVKVLQNsse 107
Cdd:COG1629 1 LEEVVVTATRTDESLQDVPGSVSVISREQLeDQPATDLGDLLRRVPGVSVTSAGGGAGQISIRGFGGggNRVLVLVD--- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 108 NIDVSTLSPDHAVI--VDPVLAKQVEVIRGPSTLLFGAGTVGGLVNVIdnkipTQMPENGYEGQVGLRYNTGSDEKlASA 185
Cdd:COG1629 78 GVPLNDPSGGDGGLsyIDPEDIERVEVLRGPSSALYGSGALGGVINIV-----TKKPKDGKGGEVSASYGSYGTYR-ASL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 186 GVTVGLGSqVALRVEGLTRDANNYIapnyihegekerrvDNTFAQGDSVNVGLSW-IYDRGYTGISYSNRRDQYGLPGhs 264
Cdd:COG1629 152 SLSGGNGK-LAYRLSASYRDSDGYR--------------DNSDSDRYNLRAKLGYqLGDDTRLTLSASYSDSDQDSPG-- 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 265 heyescsahlggrphlhcgdhEHEEGEETHDHEHEEHEHEHGGPWIDLKSERYDFKTELNdPFAGFQKLRAQASY----T 340
Cdd:COG1629 215 ---------------------YLTLAALRPRGAMDDGTNPYSNDTDDNTRDRYSLSLEYE-HLGDGLKLSASAYYryddT 272
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 341 DYQHDEIEEGAIATRFQ-------NKGYDGRIELVHNPIASWEGVIGAQLGQQKLDLTGEEAFMA-------------PT 400
Cdd:COG1629 273 DLDSDFTPTPADGGTLEqtdfdnrTYGLELRLTYDLGFGGKHTLLVGLDYQRQDLDGSGYPLDLGsgslptltsgaddDG 352
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 401 TTKKWSVFALEHKQWKD-VHFELSARADQQEIDVDD------NSKQDFDGSAFSYAGAANWEFVPNYKLSFVASHQERLP 473
Cdd:COG1629 353 TTTSLALYAQDTYKLTDkLTLTAGLRYDYVSYDVDDtvtgtdSASGSRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAP 432
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 474 LAQELYANGghfaTNTYELGNDQLSKEKSNNVELGL--HFDNNKLDYHLHVYHNWFDDYIYAQTLDRYKDFRLVQYTQDK 551
Cdd:COG1629 433 TFGELYANG----TDPYSVGNPDLKPETSTNYELGLryRLLDGRLSLSLALFYSDVDNEILSVPLPNDSGFSTYYTNAGK 508
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 552 ARFYGAEGEIGYQITPMYKISAFGDYVRGKIDAEGNA---------PRIPAGRLGTKVDADFGDGFSGSAEYYHVFNQ-- 620
Cdd:COG1629 509 ARSYGVELELSYQLTPGLSLNASYSYTDAKFDDDTDGsadldgnrlPGVPPLTANLGLTYEFPGGWSLGLGVRYVGDRyl 588
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 1335750474 621 DKIAAYETETeGYNMLNLGVAYSgqygAKTDYRVYMKANNLLDDTVYQHASFLSN 675
Cdd:COG1629 589 DDANTQGAPG-GYTLVDLGAGYR----FGDNLTLSLGVDNLFDKKYATSLSVRAS 638
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
53-691 |
2.95e-51 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 188.43 E-value: 2.95e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 53 TVVDQKHL-SQGAATIGDALSSEVGIYANQFGAGSSR-PVIRGQDGPRVKVL-----QNSSENIDVSTLSpdhavIVDPV 125
Cdd:cd01347 3 SVITAEDIeKQPATSLADLLRRIPGVSVTRGGGGGGStISIRGFGPDRTLVLvdglpLASSNYGRGVDLN-----TIPPE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 126 LAKQVEVIRGPSTLLFGAGTVGGLVNVIdnkipTQMPENGYEGQVGLRYNTGSDEKLASAGVTVGL----GSQVALRVEG 201
Cdd:cd01347 78 LIERVEVLKGPSSALYGSGAIGGVVNII-----TKRPTDEFGGSVTAGYGSDNSGSSGGGGFDVSGaladDGAFGARLYG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 202 LTRDANNYIAPNYIHEGEKERRvdntfaqgDSVNVGLSW-IYDRGY-TGISYSNRRDQYGLPGHSHEYESCSAHLGGRPH 279
Cdd:cd01347 153 AYRDGDGTIDGDGQADDSDEER--------YNVAGKLDWrPDDDTRlTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSS 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 280 lhcgdheheegeethdheheehEHEHGGPWIDLKSERY-DFKTELNDPFAGFQKLRAQASYTDYQHDEIEEG------AI 352
Cdd:cd01347 225 ----------------------NTNGDRDWDYRDRYRKrASLGLEHDLNDTGWTLRANLSYSYTDNDGDPLIlnggnnAA 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 353 ATRFQNKGYDGRIELVHNPI-ASWEGVIGAQLGQQKLdLTGEEAFMAPTTTKKWSVFA-LEHKQWKDVHFELSARADQQE 430
Cdd:cd01347 283 GGDLGRSGYSSERDTTQLGFdAGLNAPFGTGPVAHTL-TLGVEYRREELDEKQTALYAqDTIELTDDLTLTLGLRYDHYD 361
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 431 IDVDDNSKQDF----DGSAFSYAGAANWEFVPNYKLSFVASHQERLPLAQELYANGGHFATNTYelGNDQLSKEKSNNVE 506
Cdd:cd01347 362 QDSKDTIAGGTtakkSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAAV--GNPNLKPEKSKQYE 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 507 LGLHFD-NNKLDYHLHVYHNWFDDYIYAQTlDRYKDFRLVQYTQ-DKARFYGAEGEIGYQITPMYKISAFGDYVRGKI-- 582
Cdd:cd01347 440 LGLKYDpGDGLTLSAALFRIDIKNEIVSTP-TNTGLGLVTVYVNgGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVkr 518
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 583 ---DAEGNA-PRIPAGRLGTKVDADFG-DGFS--GSAEYYHVFNQDKIAAYET-ETEGYNMLNLGVAYSGQYgaktDYRV 654
Cdd:cd01347 519 tdgATTGNRlPGIPKHTANLGLDYELPdEGLTagGGVRYRGKQYADTANGNNTvKVPGYTLVDLSASYQFTK----NLTL 594
|
650 660 670 680
....*....|....*....|....*....|....*....|.
gi 1335750474 655 YMKANNLLD----DTVYQHASFLSNIPQVGRNFTVGVDFSF 691
Cdd:cd01347 595 RLGVNNLFDkdyyTSLSVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
31-691 |
1.09e-36 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 146.38 E-value: 1.09e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 31 LETIRIKAHPLEQTSQDFAVADTVVDQKHL-SQGAATIGDALSSEVGIYANqfgaGSSR-----PVIRGQDGPRVKVLQN 104
Cdd:TIGR01785 1 LDTVTVTATRTRQVLSEAPASVSVISGEQIeSKQANNLADALNTVPGVDVT----GGGRppgqsINIRGLQDNRVLVVVD 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 105 SSENIDVSTLSPDHAVIVDPVLAKQVEVIRGPSTLLFGAGTVGGLVNVIDNKIPTQMPEN-GYEGQVGLRYNTGSDEKLA 183
Cdd:TIGR01785 77 GARQNYQRGGAHNGSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAADLLRPGqLFGGLAKLSYGSNNNSFGG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 184 SAGVTVGLGSQVALRVEGLTRDANNYiapnyiHEGEKERRVDNTFAQGDSVNVGLSWIYDRGYTGISYSNRRDQYGLP-- 261
Cdd:TIGR01785 157 SVAVAGRLDDNLDALVAATYRDGGNY------RNGNKEEATNSAYVQKNLLAKLGWQLDDAQRLEFSYFTTEGSLDEAqn 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 262 -GHSHEYESCSAHlggrphlhcgdHEHEEGEETHDHEHEEHEHEHGGPWIDLKSERYDFKTELNDPfagfqklRAQASY- 339
Cdd:TIGR01785 231 sGPGTEYVLGSSS-----------TLLASSTRDRSATLTYNWTPEDNPWLDATASLYYNRTENDND-------RSARGVg 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 340 TDYQHDEIEEGAIA---TRFQnkgydgrielvhnpIASWE----GVIGAQLGQQKLDLTGE-----EAFMAPTTTKKWSV 407
Cdd:TIGR01785 293 REEGYQYTTYGATLqntSRFD--------------VASWStltyGVDWMKDKRRTESFDPNsvttiVPNPPSAKEYFFGL 358
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 408 FALEHKQWKDVHFELSA--RADQQEIDVDDN---SKQDFDGSAFSYAGAANWEFVPNYKLSFVASHQERLPLAQELYANG 482
Cdd:TIGR01785 359 FLQDNIPLLDDRLTLSAglRYDHYKLSPKTTadtEAVDRSYSRWSPSLGLSYKPVDWLTLYASYSQGFRAPSIDELYGTG 438
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 483 GHFATNT--YELGNDQLSKEKSNNVELG--LHFD-----NNKLDYHLHVYHNWFDDYIyAQTLDRYK--DFRLVQYTQ-- 549
Cdd:TIGR01785 439 DHPGTPGgyTFAPNPNLKPETSKTWELGanLSFDnllldNDQLQFKVAYFYNDVKDFI-DLTIGVTDnvTAGMNNITQyv 517
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 550 --DKARFYGAEGEIGYQITPMYkISAFGDYVRGKiDAEGNAP--RIPAGRLGTKVDADF-GDGFSGSAEYYHVFNQDKI- 623
Cdd:TIGR01785 518 niDGARIRGIEASASYDAGLWA-TGLSYGYTIGK-DQNTNQWlsNIPPLKLVVTVGYRFpDRRLDLGAKAAYYERQSESp 595
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1335750474 624 ------AAYETETEGYNMLNLGVAYSGQygAKTDYRVYMKANNLLDDTVYQHASFLSNIPqvGRNFTVGVDFSF 691
Cdd:TIGR01785 596 ttedvaANGLLTTPGYTVVDLYATYQPN--AVKGLTVRFGVNNLTDRKYTPAQSVPGAGP--GRNFKGSVKYQF 665
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
311-690 |
3.94e-31 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 127.58 E-value: 3.94e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 311 DLKSERYDFKTELNDPFAGFQKLRAQASYTDYQHDEIEEGAIATRFQNKGYDGRIELVHNPIA--------SWEGVIGAQ 382
Cdd:pfam00593 59 DRKRLSLGYDYDLGDGLSWLSTLRLGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGdlelsldlSHDLLLGVE 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 383 LGQQKLD--------------LTGEEAFMAPTTTKKWSVFALEHKQWKD-VHFELSARADQQEIDVDDNSKQ----DFDG 443
Cdd:pfam00593 139 LRTAGLDyrrldddaydpydpANPSSSSYSDTTTDSYGLYLQDNIKLTDrLTLTLGLRYDHYSTDGDDGNGGgdnfSRSY 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 444 SAFSYAGAANWEFVPNYKLSFVASHQERLPLAQELYANGGHFATNTYELGNDQLSKEKSNNVELGLHFDNNKLDYHLHVY 523
Cdd:pfam00593 219 SAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGGGGGAVAGGNPDLKPETSDNYELGLKYDDGRLSLSLALF 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 524 HNWFDDYIYAQTLDRYKDFRLVQYTQ-DKARFYGAEGEIGYQI-TPMYKISAFGdYVRGKIDAEGNA-----PRIP--AG 594
Cdd:pfam00593 299 YIDIKNLITSDPDGPGLGGTVYTYTNvGKARIRGVELELSGRLwGLGLSGGGYT-YTDADDDADADDtgnplPNVPrhTA 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 595 RLGTKVDADFGDgFSGSAEYYHVFNQDKI---AAYETETEGYNMLNLGVAYSgqygAKTDYRVYMKANNLLD----DTVY 667
Cdd:pfam00593 378 NLGLTYDFPLGG-WGARLGARYVGSGERRygdAANTFKTPGYTLVDLSAGYR----LNKNLTLRLGVNNLFDkyykRYYS 452
|
410 420
....*....|....*....|...
gi 1335750474 668 QHASFLSNIPQVGRNFTVGVDFS 690
Cdd:pfam00593 453 SGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
3-157 |
7.02e-10 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 62.09 E-value: 7.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 3 FYKNILTLSILAAISVPVFAAESENVE-KLETIRIKAHPLEQTSQDFAVADTVVDQKHLSQGAAT-IGDALSSEVGIYAN 80
Cdd:PRK13513 6 RKTHKAALVIAAAISSQAYAAEKTNTAtPTDTMVVTASGFQQRIQDAPASISVVTREQLENKAYRdVTDALKDVPGVVVT 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 81 qfGAGSSRPV-IRGQ---------DGPRVKVlQNSSENIDVSTLS----PDHAVIvdpvlaKQVEVIRGPSTLLFGAGTV 146
Cdd:PRK13513 86 --GGGSTSDIsIRGMaakytlilvDGKRVDT-RSTRPNSDGSGIEqgwlPPLAAI------ERIEVVRGPMSSLYGSDAM 156
|
170
....*....|.
gi 1335750474 147 GGLVNVIDNKI 157
Cdd:PRK13513 157 GGVINIITRKV 167
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Zn_piracy_ZnuD |
NF038289 |
zinc piracy TonB-dependent receptor ZnuD; ZnuD, as described in Acinetobacter baumannii, works ... |
3-691 |
0e+00 |
|
zinc piracy TonB-dependent receptor ZnuD; ZnuD, as described in Acinetobacter baumannii, works with the zinc uptake transporter ZnuABC to overcome sequestration of zinc by the host. ZnuD, TonB-dependent receptor, pirates zinc from the host protein calprotectin. A similar ZnuD family protein, outside the current scope of this model, has been characterized in Neisseria.
Pssm-ID: 468454 [Multi-domain] Cd Length: 684 Bit Score: 1411.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 3 FYKNILTLSILAAISVPVFAAESENVEKLETIRIKAHPLEQTSQDFAVADTVVDQKHLSQGAATIGDALSSEVGIYANQF 82
Cdd:NF038289 2 FHKNLLTLSILAVISPSVFAQENEPVQQLETIQIQAHPLVQTAADFAVADHVVDQKQLSQGATTIGDALADELGVYSNQF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 83 GAGSSRPVIRGQDGPRVKVLQNSSENIDVSTLSPDHAVIVDPVLAKQVEVIRGPSTLLFGAGTVGGLVNVIDNKIPTQMP 162
Cdd:NF038289 82 GAGSSRPVIRGQDGARVKVLQNASETMDVSTLSPDHAVTVDPILAKQVEVIRGPSTLLYGAGTVGGLVNVTDSKIPTQMP 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 163 ENGYEGQVGLRYNTGSDEKLASAGVTVGLGSQVALRVEGLTRDANNYIAPNYIHEGE--KERRVDNTFAQGDSVNVGLSW 240
Cdd:NF038289 162 EKGYEGQVGLRYNTGSDEKLASAGVTVGLGDQVALRVEGLKRDANDYIAPDYLHEGEftKERRVDNTFAESQTVNVGLSW 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 241 IYDRGYTGISYSNRRDQYGLPGHSHEYESCSAHLggrPHLHCGDHEHEEGEETHDHEHEEHEHEhggPWIDLKSERYDFK 320
Cdd:NF038289 242 IYDRGFTGISYSNRQDQYGLPGHSHEYESCHPHG---PHLHCGSHDHGDDEGHHHHDHEHDHAG---PWIDLKSERYDFR 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 321 TELNDPFAGFQKLRAQASYTDYQHDEIEEGAIATRFQNKGYDGRIELVHNPIASWEGVIGAQLGQQKLDLTGEEAFMAPT 400
Cdd:NF038289 316 TELNDPFAGFKKLRAQASYTDYQHDEIEEDEIATTFKSKGYDGRLELVHNPIAGWEGVIGTQYSQQKLNLTGEEAFMAPN 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 401 TTKKWSVFALEHKQWKDVHFELSARADQQEIDVDdNSKQDFDGSAFSYAGAANWEFVPNYKLSFVASHQERLPLAQELYA 480
Cdd:NF038289 396 TTKKWSLFALEHKQWNDVHVELAARVDQQKIDID-STQKDYDGTAFSYSGAANWEFAPNYKLSLVASHQERLPLAQELYA 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 481 NGGHFATNTYELGNDQLSKEKSNNVELGLHFDNNKLDYHLHVYHNWFDDYIYAQTLDRYKDFRLVQYTQDKARFYGAEGE 560
Cdd:NF038289 475 DGKHFATNTYELGNDNLDKEKSNNLELGLHYDNDKLDYHVHVYHNWFDDYIYAQTLDRYEDFRLVQYTQDKARFYGAEAE 554
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 561 IGYQITPMYKISAFGDYVRGKIDAEgNAPRIPAGRLGTKVDADFGDGFSGSAEYYHVFNQDKIAAYETETEGYNMLNLGV 640
Cdd:NF038289 555 AGYQISPRYKLSVFGDYVRGKIDNE-NAPRVPAGRLGTKVNADFGDGWSGSAEYYHVFNQDKIAAYETETQGYNMLNLGL 633
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|.
gi 1335750474 641 AYSGQYGAKTDYRVYMKANNLLDDTVYQHASFLSNIPQVGRNFTVGVDFSF 691
Cdd:NF038289 634 AYAGQYSNKTDYRVYFKANNLLDDQVYQHASFLSNIPQVGRNFTVGVDFSF 684
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
31-675 |
1.03e-70 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 242.43 E-value: 1.03e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 31 LETIRIKAHPLEQTSQDFAVADTVVDQKHL-SQGAATIGDALSSEVGIYANQFGAGSSRPVIRGQDG--PRVKVLQNsse 107
Cdd:COG1629 1 LEEVVVTATRTDESLQDVPGSVSVISREQLeDQPATDLGDLLRRVPGVSVTSAGGGAGQISIRGFGGggNRVLVLVD--- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 108 NIDVSTLSPDHAVI--VDPVLAKQVEVIRGPSTLLFGAGTVGGLVNVIdnkipTQMPENGYEGQVGLRYNTGSDEKlASA 185
Cdd:COG1629 78 GVPLNDPSGGDGGLsyIDPEDIERVEVLRGPSSALYGSGALGGVINIV-----TKKPKDGKGGEVSASYGSYGTYR-ASL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 186 GVTVGLGSqVALRVEGLTRDANNYIapnyihegekerrvDNTFAQGDSVNVGLSW-IYDRGYTGISYSNRRDQYGLPGhs 264
Cdd:COG1629 152 SLSGGNGK-LAYRLSASYRDSDGYR--------------DNSDSDRYNLRAKLGYqLGDDTRLTLSASYSDSDQDSPG-- 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 265 heyescsahlggrphlhcgdhEHEEGEETHDHEHEEHEHEHGGPWIDLKSERYDFKTELNdPFAGFQKLRAQASY----T 340
Cdd:COG1629 215 ---------------------YLTLAALRPRGAMDDGTNPYSNDTDDNTRDRYSLSLEYE-HLGDGLKLSASAYYryddT 272
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 341 DYQHDEIEEGAIATRFQ-------NKGYDGRIELVHNPIASWEGVIGAQLGQQKLDLTGEEAFMA-------------PT 400
Cdd:COG1629 273 DLDSDFTPTPADGGTLEqtdfdnrTYGLELRLTYDLGFGGKHTLLVGLDYQRQDLDGSGYPLDLGsgslptltsgaddDG 352
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 401 TTKKWSVFALEHKQWKD-VHFELSARADQQEIDVDD------NSKQDFDGSAFSYAGAANWEFVPNYKLSFVASHQERLP 473
Cdd:COG1629 353 TTTSLALYAQDTYKLTDkLTLTAGLRYDYVSYDVDDtvtgtdSASGSRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAP 432
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 474 LAQELYANGghfaTNTYELGNDQLSKEKSNNVELGL--HFDNNKLDYHLHVYHNWFDDYIYAQTLDRYKDFRLVQYTQDK 551
Cdd:COG1629 433 TFGELYANG----TDPYSVGNPDLKPETSTNYELGLryRLLDGRLSLSLALFYSDVDNEILSVPLPNDSGFSTYYTNAGK 508
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 552 ARFYGAEGEIGYQITPMYKISAFGDYVRGKIDAEGNA---------PRIPAGRLGTKVDADFGDGFSGSAEYYHVFNQ-- 620
Cdd:COG1629 509 ARSYGVELELSYQLTPGLSLNASYSYTDAKFDDDTDGsadldgnrlPGVPPLTANLGLTYEFPGGWSLGLGVRYVGDRyl 588
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 1335750474 621 DKIAAYETETeGYNMLNLGVAYSgqygAKTDYRVYMKANNLLDDTVYQHASFLSN 675
Cdd:COG1629 589 DDANTQGAPG-GYTLVDLGAGYR----FGDNLTLSLGVDNLFDKKYATSLSVRAS 638
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
53-691 |
2.95e-51 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 188.43 E-value: 2.95e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 53 TVVDQKHL-SQGAATIGDALSSEVGIYANQFGAGSSR-PVIRGQDGPRVKVL-----QNSSENIDVSTLSpdhavIVDPV 125
Cdd:cd01347 3 SVITAEDIeKQPATSLADLLRRIPGVSVTRGGGGGGStISIRGFGPDRTLVLvdglpLASSNYGRGVDLN-----TIPPE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 126 LAKQVEVIRGPSTLLFGAGTVGGLVNVIdnkipTQMPENGYEGQVGLRYNTGSDEKLASAGVTVGL----GSQVALRVEG 201
Cdd:cd01347 78 LIERVEVLKGPSSALYGSGAIGGVVNII-----TKRPTDEFGGSVTAGYGSDNSGSSGGGGFDVSGaladDGAFGARLYG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 202 LTRDANNYIAPNYIHEGEKERRvdntfaqgDSVNVGLSW-IYDRGY-TGISYSNRRDQYGLPGHSHEYESCSAHLGGRPH 279
Cdd:cd01347 153 AYRDGDGTIDGDGQADDSDEER--------YNVAGKLDWrPDDDTRlTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSS 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 280 lhcgdheheegeethdheheehEHEHGGPWIDLKSERY-DFKTELNDPFAGFQKLRAQASYTDYQHDEIEEG------AI 352
Cdd:cd01347 225 ----------------------NTNGDRDWDYRDRYRKrASLGLEHDLNDTGWTLRANLSYSYTDNDGDPLIlnggnnAA 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 353 ATRFQNKGYDGRIELVHNPI-ASWEGVIGAQLGQQKLdLTGEEAFMAPTTTKKWSVFA-LEHKQWKDVHFELSARADQQE 430
Cdd:cd01347 283 GGDLGRSGYSSERDTTQLGFdAGLNAPFGTGPVAHTL-TLGVEYRREELDEKQTALYAqDTIELTDDLTLTLGLRYDHYD 361
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 431 IDVDDNSKQDF----DGSAFSYAGAANWEFVPNYKLSFVASHQERLPLAQELYANGGHFATNTYelGNDQLSKEKSNNVE 506
Cdd:cd01347 362 QDSKDTIAGGTtakkSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAAV--GNPNLKPEKSKQYE 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 507 LGLHFD-NNKLDYHLHVYHNWFDDYIYAQTlDRYKDFRLVQYTQ-DKARFYGAEGEIGYQITPMYKISAFGDYVRGKI-- 582
Cdd:cd01347 440 LGLKYDpGDGLTLSAALFRIDIKNEIVSTP-TNTGLGLVTVYVNgGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVkr 518
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 583 ---DAEGNA-PRIPAGRLGTKVDADFG-DGFS--GSAEYYHVFNQDKIAAYET-ETEGYNMLNLGVAYSGQYgaktDYRV 654
Cdd:cd01347 519 tdgATTGNRlPGIPKHTANLGLDYELPdEGLTagGGVRYRGKQYADTANGNNTvKVPGYTLVDLSASYQFTK----NLTL 594
|
650 660 670 680
....*....|....*....|....*....|....*....|.
gi 1335750474 655 YMKANNLLD----DTVYQHASFLSNIPQVGRNFTVGVDFSF 691
Cdd:cd01347 595 RLGVNNLFDkdyyTSLSVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
7-642 |
9.54e-50 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 183.90 E-value: 9.54e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 7 ILTLSILAAISVPVFAAESENVEKLETIRIKAHPLEQTSQDFAVADTVVDQKHLSQ-GAATIGDALSSEVGIYANQFG-- 83
Cdd:COG4771 3 LASLLLLLALAAQAADALAEDATELEEVVVTATRTEQSLSDAPASVSVITAEEIEKlGATDLADALRLLPGVSVTRSGgr 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 84 AGSSRPVIRGQDGPRVKVL-----QNSSENIDVSTLSPdhaviVDPVLAKQVEVIRGPSTLLFGAGTVGGLVNVIdnkip 158
Cdd:COG4771 83 GGSSGISIRGLGGDRVLVLidgvpVNNPALGGGGDLSY-----IPPDDIERIEVIRGPASALYGSDAIGGVINII----- 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 159 TQMPENGYEGQVGLRYNTGSDEKLaSAGVTVGLGS-QVALRVEGLTRDANNYIAPNYIhegekeRRVDNTFAQGDSVNVG 237
Cdd:COG4771 153 TKKPTDELEGSVSLGYGSNGNGTY-SGSLSLGGPGdKLSFLLSGSYRDRDGYLDYRNG------GFVGNSGYERYNLNAK 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 238 LSWIYDRG---YTGISYSNRRDQYGLPGhsheyescsahlggrphlhcgdheheegeethdhEHEEHEHEHGGPWIDLKS 314
Cdd:COG4771 226 LGYRLSDNhrlSLSGGYSRQDRDGGPPT----------------------------------LGDTEISSDNAGDRDTTT 271
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 315 ERYDFKTELNDPFAgfQKLRAQASYTDYQHDEIEEGAIAT-----RFQNKGYDGRIELVHNPIASWEGVIGAQLGQQKLD 389
Cdd:COG4771 272 DRGNYSLRYNGDLG--DNLDLSLYYSRTDRDSTNGSLGGStgsfsDSDDTTYGLELDLTYPLGGNHTLTLGAEYRYDDLD 349
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 390 LTGEEAFmAPTTTKKWSVFA-LEHKQWKDVHFELSARADqqeidvDDNSKQDFDGSAFSYAGAANWEFVPNYKLSFVASH 468
Cdd:COG4771 350 SSSFLGG-ADASRDTYGLFAqDEWKLTDKLTLTAGLRYD------YYSTFGASNYTAFSPRLGLRYDLSDNLTLRASYGR 422
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 469 QERLPLAQELYANGGHFATNTYeLGNDQLSKEKSNNVELGLHFDNNKLDYHLHV--YHNWFDDYIYAQTLDRYKDFRLVQ 546
Cdd:COG4771 423 GFRAPSLAELYGSGTGTPGRYV-LGNPDLKPETSDNYELGLEYRLGNGGLSLSLtgFYTDIKDLIVLVPVGPGPGDVLQY 501
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 547 YTQDKARFYGAEGEIGYQITPMYKISAFGDYVRGKID---AEGNAPRIPAGRLGTKVDADFGDGFSGSAEYYHVFNQ--- 620
Cdd:COG4771 502 ENVGKARTYGLELELKYRLGKGLTLTASYTYLDSKIDdgdTGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRyvt 581
|
650 660
....*....|....*....|..
gi 1335750474 621 DKIAAYETETEGYNMLNLGVAY 642
Cdd:COG4771 582 PPSGRLEGYTPGYTLLDLRASY 603
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
31-691 |
1.09e-36 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 146.38 E-value: 1.09e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 31 LETIRIKAHPLEQTSQDFAVADTVVDQKHL-SQGAATIGDALSSEVGIYANqfgaGSSR-----PVIRGQDGPRVKVLQN 104
Cdd:TIGR01785 1 LDTVTVTATRTRQVLSEAPASVSVISGEQIeSKQANNLADALNTVPGVDVT----GGGRppgqsINIRGLQDNRVLVVVD 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 105 SSENIDVSTLSPDHAVIVDPVLAKQVEVIRGPSTLLFGAGTVGGLVNVIDNKIPTQMPEN-GYEGQVGLRYNTGSDEKLA 183
Cdd:TIGR01785 77 GARQNYQRGGAHNGSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAADLLRPGqLFGGLAKLSYGSNNNSFGG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 184 SAGVTVGLGSQVALRVEGLTRDANNYiapnyiHEGEKERRVDNTFAQGDSVNVGLSWIYDRGYTGISYSNRRDQYGLP-- 261
Cdd:TIGR01785 157 SVAVAGRLDDNLDALVAATYRDGGNY------RNGNKEEATNSAYVQKNLLAKLGWQLDDAQRLEFSYFTTEGSLDEAqn 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 262 -GHSHEYESCSAHlggrphlhcgdHEHEEGEETHDHEHEEHEHEHGGPWIDLKSERYDFKTELNDPfagfqklRAQASY- 339
Cdd:TIGR01785 231 sGPGTEYVLGSSS-----------TLLASSTRDRSATLTYNWTPEDNPWLDATASLYYNRTENDND-------RSARGVg 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 340 TDYQHDEIEEGAIA---TRFQnkgydgrielvhnpIASWE----GVIGAQLGQQKLDLTGE-----EAFMAPTTTKKWSV 407
Cdd:TIGR01785 293 REEGYQYTTYGATLqntSRFD--------------VASWStltyGVDWMKDKRRTESFDPNsvttiVPNPPSAKEYFFGL 358
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 408 FALEHKQWKDVHFELSA--RADQQEIDVDDN---SKQDFDGSAFSYAGAANWEFVPNYKLSFVASHQERLPLAQELYANG 482
Cdd:TIGR01785 359 FLQDNIPLLDDRLTLSAglRYDHYKLSPKTTadtEAVDRSYSRWSPSLGLSYKPVDWLTLYASYSQGFRAPSIDELYGTG 438
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 483 GHFATNT--YELGNDQLSKEKSNNVELG--LHFD-----NNKLDYHLHVYHNWFDDYIyAQTLDRYK--DFRLVQYTQ-- 549
Cdd:TIGR01785 439 DHPGTPGgyTFAPNPNLKPETSKTWELGanLSFDnllldNDQLQFKVAYFYNDVKDFI-DLTIGVTDnvTAGMNNITQyv 517
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 550 --DKARFYGAEGEIGYQITPMYkISAFGDYVRGKiDAEGNAP--RIPAGRLGTKVDADF-GDGFSGSAEYYHVFNQDKI- 623
Cdd:TIGR01785 518 niDGARIRGIEASASYDAGLWA-TGLSYGYTIGK-DQNTNQWlsNIPPLKLVVTVGYRFpDRRLDLGAKAAYYERQSESp 595
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1335750474 624 ------AAYETETEGYNMLNLGVAYSGQygAKTDYRVYMKANNLLDDTVYQHASFLSNIPqvGRNFTVGVDFSF 691
Cdd:TIGR01785 596 ttedvaANGLLTTPGYTVVDLYATYQPN--AVKGLTVRFGVNNLTDRKYTPAQSVPGAGP--GRNFKGSVKYQF 665
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
311-690 |
3.94e-31 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 127.58 E-value: 3.94e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 311 DLKSERYDFKTELNDPFAGFQKLRAQASYTDYQHDEIEEGAIATRFQNKGYDGRIELVHNPIA--------SWEGVIGAQ 382
Cdd:pfam00593 59 DRKRLSLGYDYDLGDGLSWLSTLRLGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGdlelsldlSHDLLLGVE 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 383 LGQQKLD--------------LTGEEAFMAPTTTKKWSVFALEHKQWKD-VHFELSARADQQEIDVDDNSKQ----DFDG 443
Cdd:pfam00593 139 LRTAGLDyrrldddaydpydpANPSSSSYSDTTTDSYGLYLQDNIKLTDrLTLTLGLRYDHYSTDGDDGNGGgdnfSRSY 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 444 SAFSYAGAANWEFVPNYKLSFVASHQERLPLAQELYANGGHFATNTYELGNDQLSKEKSNNVELGLHFDNNKLDYHLHVY 523
Cdd:pfam00593 219 SAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGGGGGAVAGGNPDLKPETSDNYELGLKYDDGRLSLSLALF 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 524 HNWFDDYIYAQTLDRYKDFRLVQYTQ-DKARFYGAEGEIGYQI-TPMYKISAFGdYVRGKIDAEGNA-----PRIP--AG 594
Cdd:pfam00593 299 YIDIKNLITSDPDGPGLGGTVYTYTNvGKARIRGVELELSGRLwGLGLSGGGYT-YTDADDDADADDtgnplPNVPrhTA 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 595 RLGTKVDADFGDgFSGSAEYYHVFNQDKI---AAYETETEGYNMLNLGVAYSgqygAKTDYRVYMKANNLLD----DTVY 667
Cdd:pfam00593 378 NLGLTYDFPLGG-WGARLGARYVGSGERRygdAANTFKTPGYTLVDLSAGYR----LNKNLTLRLGVNNLFDkyykRYYS 452
|
410 420
....*....|....*....|...
gi 1335750474 668 QHASFLSNIPQVGRNFTVGVDFS 690
Cdd:pfam00593 453 SGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
53-691 |
5.47e-27 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 116.52 E-value: 5.47e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 53 TVVDQKHL-SQGAATIGDALSSEVGIYANQ-FGAGSSRPVIRGQ--------DGPRVKVLQN-SSENIDvstlspdhavi 121
Cdd:COG4774 14 TVVTRELIeDQGATSLADALRNVPGVTFGAgEGGNGDSFSIRGFsasgdiyvDGLRDPGQYRrDTFNLE----------- 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 122 vdpvlakQVEVIRGPSTLLFGAGTVGGLVNVIdnkipTQMPENGYEGQVGLRYNTGsDEKLASAGVTVGLGSQVALRVEG 201
Cdd:COG4774 83 -------RVEVLKGPASVLYGRGSPGGVINLV-----TKRPTDEPFTEVTLTYGSD-GQRRATLDVNGPLGDDLAYRLNG 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 202 LTRDANNYiapnyihegekerrVDNTFAQGDSVNVGLSW-IYDRGYTGISYS----NRRDQYGLPghsheyescsAHLGG 276
Cdd:COG4774 150 MYRDSDSY--------------RDGVDNDRWGIAPSLTWrLGDRTRLTLDYEyqddDRTPDYGVP----------AVANG 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 277 RPhlhcgdheheegeethdhEHEEHEHEHGGPWIDLKSE----RYDFKTELNDPFagfqKLRAQASYTDYQHD------- 345
Cdd:COG4774 206 RP------------------VDVDRSTFYGQPDDYSDSEtdsaTLRLEHDFNDNW----TLRNALRYSDYDRDyrntypt 263
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 346 ------EIEEGAIATRFQNKGYDGRIELVHNpiASWEGV-----IGAQLGQQKLDLTGEEAFMAP--------------- 399
Cdd:COG4774 264 ggnatgTVTRSAYRRDQDNDTLSNQTDLTGK--FDTGGVkhtllAGVEYSREDSDNARYSGGGTAptvnlynpvygapvt 341
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 400 ----------TTTKKWSVFALE----HKQWKdvhFELSARADQQEIDVDD----NSKQDFDGSAFSYAGAANWEFVPNyk 461
Cdd:COG4774 342 gptlggadndSRTDTTGLYLQDtislTDRWS---LLAGLRYDRFDTDYTDrttgATTSSYDDSAFSPRAGLVYKPTPN-- 416
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 462 LSFVASHqerlplAQELYANGGhfaTNTYELGNDQLSKEKSNNVELGLHFD--NNKLDYHLHVYHNWFDDYIYAQTLDry 539
Cdd:COG4774 417 LSLYASY------STSFNPGGG---APSLSNAGQALDPEKSRQYEVGVKWDllDGRLSLTAALFRIEKTNVRTTDPAN-- 485
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 540 kdfRLVQYTQDKARFYGAEGEIGYQITPMYKISAFGDYVRGKI------DAEGN-APRIP--AGRLGTKVDADFgDGFSG 610
Cdd:COG4774 486 ---PGVYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEItksanaANVGNrLPNVPrhSASLWTTYDLPL-PGLTL 561
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 611 SAEYYHVFNQDKIAAYETETEGYNMLNLGVAYSGQygakTDYRVYMKANNLLDDTVYQHASFLSNI-PQVGRNFTVGVDF 689
Cdd:COG4774 562 GGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLN----KNLTLRLNVNNLTDKRYYASAYGSGYVtPGAPRTVLLSASY 637
|
..
gi 1335750474 690 SF 691
Cdd:COG4774 638 RF 639
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
47-689 |
7.11e-27 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 116.36 E-value: 7.11e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 47 DFAVADTVVDQKHLS-QGAATIGDALSSEVGIYANQFGAGSSRP--VIRGQdGPRVKVLQNSSENidVSTLSPDHAVIVD 123
Cdd:TIGR01783 1 DIPQSVSVITRQELEdQQAGSLSEALQRVPGVVVGGSGGTTQFGniTIRGF-GLEVDIDNVYLDG--VPLLSRGNLAIVD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 124 PVLAKQVEVIRGPSTLLFGAGTVGGLVNVIDNKiPTQMPENGYEGQVG--LRYNTGSDeklasAGVTVGLGSQVALRVEG 201
Cdd:TIGR01783 78 PAMVERVEVLRGPASLLYGGSAPGGVINIVTKR-PQDEPKGSVTFGAGtrSGYRTAFD-----LGGPLGADGTFRGRLNG 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 202 LTRDANNYiapnYIHEGEkERRVDNT---FAQGDSVNVGLSWIYDR-----GYTGISYSNRRDQYGLPGHsheyescsAH 273
Cdd:TIGR01783 152 ARQDGDSF----YDGAGE-ETRLGATatdWQLDDRTLLRLGAYYQKerdrgGYGGLPASGGTSGRDLSSD--------RY 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 274 LGGRPHlhcgdheheegeethdheheehehehgGPWIDLKSERYDFktELNDPFAGFQKLRAQASYTDYQHDEIEEGAIA 353
Cdd:TIGR01783 219 LGTSSN---------------------------RNYDDREYLSYGL--SLEYQFNDVWTGKQNLRYSYFDTDSNQVQASG 269
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 354 TRFQNKGYDGRIELVHNPIASWEGVIGAQ------LGQQKLdLTGEEAFMapTTTKKW-SVFALEH-------------- 412
Cdd:TIGR01783 270 YSSDGGLFGRSLTVVNVKQDRVQIDAGLDgefetgPIEHDL-LLGVSYGQ--RTTNRFnNTGYPSDniysltatssartd 346
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 413 --KQWKDVH-----FELSARADQQEIDVD----------DNSKQDF---------DGSAFSYAGAANWEFVPNYKLSFVA 466
Cdd:TIGR01783 347 igDSPKDRAlssttKALNGVALQRILLADkwtltlggryDSVDVKSnngvagstgKRDDSQFTPSLGVAYKPTDDWSLYA 426
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 467 SHQERLplaqelyaNGGHFATNTYELGNDQLSKEKSNNVELGLHFD-NNKLDYHLHVYHNWFDDYIYAQTLDRYKDFRlv 545
Cdd:TIGR01783 427 SYAESF--------KPGGYYPKGAGNSGDILEPEKGKNYELGVRYDlGDSLLATAALFRITKDNQLVQDPVNGTFSVN-- 496
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 546 qytQDKARFYGAEGEIGYQITPMYKISAFGDYVRGKI------DAEGN-APRIPAGRLGTKVDADFGDGFSGSAEYYHVF 618
Cdd:TIGR01783 497 ---AGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFtedtngDTQGNtVPFVPKHTASLWASYAPPVGDNGLTLGGGVQ 573
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 619 NQDKIAAYETET---EGYNMLNLGVAYsgQYGAKTDYRVYMKANNLLDDT----VYQHASFLSNIPQVGRNF--TVGVDF 689
Cdd:TIGR01783 574 YTGKAYVDGGNTgkvPSYTVVDLSVRY--DLTKKKNLTLALNVNNLFDRDyytsGYRWGPSAYIYPGAPRTVglSVSYDF 651
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
7-691 |
1.21e-18 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 90.34 E-value: 1.21e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 7 ILTLSILAAISVPVFA----AESENVEKLETIRIKAHPLEQTSQ-----------DFAVADT-----VVDQKHL-SQGAA 65
Cdd:COG4773 4 LLAGSGLAAAAAGALAqaaaAAAAEATTLPEVTVTGTAEGTGGYtakssstatklDTPLRETpqsvsVVTRQLIeDQGAT 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 66 TIGDALSSEVGIYANQ-FGAGSSRPVIRG-------QDGPRVKVLQNSSenidvstlspdhaviVDPVLAKQVEVIRGPS 137
Cdd:COG4773 84 TLDDALRNVPGVTVSSyDGGGRDSFSIRGfsidnylRDGLPLGGFGGGQ---------------PDTANLERVEVLKGPA 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 138 TLLFGAGTVGGLVNVIdnkipTQMPENGYEGQVGLRYntGS-DEKLASAGVTVGLGS--QVALRVEGLTRDANNYiapny 214
Cdd:COG4773 149 GLLYGAGSPGGLVNLV-----TKRPTAEPQGEVSLSA--GSwDTYRATADVGGPLNEdgTLRYRLNAAYEDGDSF----- 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 215 ihegekerrVDNTFAQGDSVNVGLSW-IYDR-----GYTGISYSNRRDQYGLPGhsheyescsahLGGRPHLhcgdhehe 288
Cdd:COG4773 217 ---------RDGVDNRRTLIAPSLDWdLTDDttltlGAEYQDDDSTGDRGFLPL-----------DGTLLDL-------- 268
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 289 egeethdheheEHEHEHGGPWIDLKSERYDFKTELNDPFAGFQKLRAQASYTDYQHD---------------EIEEGAIA 353
Cdd:COG4773 269 -----------PRSTNLGEPWDYYDTETTTLFAELEHRFNDDWSLRANARYSDSDRDgrsayaygapdaatgTLTRYASA 337
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 354 TRFQNKGYDGRIELVHNpiASWEG-----VIGAQLGQQKLDLTGEEA----FMAP----------------TTTKKWSVF 408
Cdd:COG4773 338 RDGDSRSDSLDANLNGK--FETGGlehtlLVGADYSRYDSDSDSATAgtinIYNPvygnlpepdfdasdtdTTTRQTGLY 415
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 409 ALEHKQWKD-VHFELSARADQQEIDVDD---NSKQDFDGSAFSYAGAANWEFVPNykLSFVAShqerlplaqelYANGgh 484
Cdd:COG4773 416 AQDQISLTDrLSLLLGGRYDWYETDSTNrlgGSTTSYDDSAFTPRAGLVYDLTPG--LSLYAS-----------YSES-- 480
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 485 FATNTY-ELGNDQLSKEKSNNVELGLHFD--NNKLDYHLHVYHnwfddyiyaqtLDryKDFRLVQ-------YTQD-KAR 553
Cdd:COG4773 481 FEPQSGaDNNGNPLDPETGKQYEAGVKGElfDGRLNATLAVFD-----------IT--QKNVATTdpdnpnfYVQVgEVR 547
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 554 FYGAEGEIGYQITPMYKISAFGDYVRGKI-----DAEGNAPR-IPA--GRLGTKVDADFGD----GFSGSAEYyhvfnQD 621
Cdd:COG4773 548 SRGVELELSGELTPGLNLIAGYTYTDAKItkdadALEGKRLTnVPRhtASLWTTYRFPSGAlkglGLGGGVRY-----VG 622
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1335750474 622 KIAAYETET---EGYNMLNLGVAYsgQYGAKTDYRVymKANNLLDDTVYQ-HASFLSNIPQVGRNFTVGVDFSF 691
Cdd:COG4773 623 ERYGDAANTftlPSYTLVDAGARY--DLGKNWTLQL--NVNNLFDKKYYAsSGSRGYVYYGAPRNVRLSLSYKF 692
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
34-260 |
7.56e-17 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 81.46 E-value: 7.56e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 34 IRIKAHPLEQTSQDFAVADTVVDQKHLSQ-GAATIGDALSSEVGIYANQFGA--GSSRPVIRGQDGPRVKVLQN------ 104
Cdd:COG4206 1 VVVTATRLEQSKSDLTGSVTVIDAEELERsGATSLADALRRVPGVQVSSSGGpgSAASISIRGLGSNQTLVLIDgvplnd 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 105 -SSENIDVSTLSPDhavivdpvLAKQVEVIRGPSTLLFGAGTVGGLVNVIdnkipTQMPENGYEGQVGLRYNTGSDEKLA 183
Cdd:COG4206 81 pSLGGVDLSLIPPD--------DIERIEVLKGAASALYGSDAIGGVINIT-----TKKGKKGFKGSVSASYGSFGTRRLS 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 184 SAGVTVGLGSQVALRVEGLTRDANNYIAPNYIHEGEKER-----RVDNTFAQGDSVNVGLSWIY-DRGYTGISYSNRRDQ 257
Cdd:COG4206 148 ASLSGGAGKFSYSLSASYRRSDGYRYNDPDLRNNDGYENtslnaRLGYKLGDNGSLSLSGGYSDsERGYPGAVGSDRNLR 227
|
...
gi 1335750474 258 YGL 260
Cdd:COG4206 228 LSL 230
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
11-691 |
1.00e-15 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 81.13 E-value: 1.00e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 11 SILAAISVPVFAAESENVEKLETIRIKAHPLEQTS-QDFAVADTVVDQKHL-SQGAATIGDALSSEVGIYA-NQFGAG-S 86
Cdd:COG4772 3 RALAAALLLAAAAAAEAATTLETVVVTGSRAAEARlKDVPGSVSVVDREELeNQAATSLREVLRRVPGVNVqEEDGFGlR 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 87 SRPVIRGQDG---PRVKVLQNsseNIDVSTlspdhAVIVDPVL--------AKQVEVIRGPSTLLFGAGTVGGLVNVIDN 155
Cdd:COG4772 83 PNIGIRGLGPrrsRGITLLED---GIPIAP-----APYGDPAAyyfpdlerMERIEVLRGAAALRYGPQTVGGAINFVTR 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 156 KIPTQMpengyEGQVGLRYntGSDEKL---ASAGVTVGlgsQVALRVEGLTRDANNYiapnyihegekeRrvDNTFAQGD 232
Cdd:COG4772 155 TIPTAF-----GGELRVTG--GSFGYRrthASVGGTVG---NFGYLVEYSRKRGDGF------------R--DNSGFDIN 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 233 SVNVGLSW-IYDRGYTGISYSNRRDQYGLPG-------HSHEYEScsahlgGRPHLhcgdheheegeethdheheehehe 304
Cdd:COG4772 211 DFNAKLGYrLSDRQELTLKFQYYDEDANTPGgltdaqfDADPRQS------YRPAD------------------------ 260
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 305 hggpWIDLKSERYDFKTELNdpFAGFQKLRAQASYTD--------YQHDEIEEGAIATRFQNKGYDGR-IELVHNPIASW 375
Cdd:COG4772 261 ----QFDTRRTQLSLRYEHQ--LSDNTTLTTTAYYNDfsrnwyirQNTADPNTPGLGLRGNPRGYRSYgIEPRLTHRFEL 334
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 376 EGV-----IGAQLGQQKLDLTGEEAFMAPT------------TTKKWSVFALEH----KQWK--------DVHFELSARA 426
Cdd:COG4772 335 GGVphtleVGLRYHREEEDRKQYVNTYGQGrsgaglrrdrrfSADALAAYAQNRfeltGRLTltpglryeHIRRDRTDRY 414
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 427 DQQEiDVDDNSKQDFD----GSAFSYAGAANWEFVPNYKLSFVAshqerlPLAQELYANGGhfatntyelGNDQLSKEKS 502
Cdd:COG4772 415 STRT-GGDDSGSNSYSeflpGLGLLYQLTDNLQLYANVSRGFEP------PTFGDLAYGNG---------GNPDLKPEKS 478
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 503 NNVELGLHFD-NNKLDYHLHVYHNWFDDYIYAQTLDRykDFRLVQYTQDKARFYGAEGEIGYQITPM--YKISAFGDY-- 577
Cdd:COG4772 479 WNYELGTRGRiGNGLSAEVALFYIDYDNELGSCSAAG--GDRSTFTNAGETRHQGLELALDYDLLKGggLGLPLFAAYty 556
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 578 VRGKIDA------EGNapRIP-----AGRLGTKVDadfGDGFSGSAEYYHV-------FNQDKIAAYEtETEGYNMLNLG 639
Cdd:COG4772 557 TDAEFTSdfgpvfAGN--RLPyvprhQLTAGLGYE---HGGWTANLNGRYVseqftdaANTVADGSFG-KIPSYTVLDLS 630
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*..
gi 1335750474 640 VAYSgqygAKTDYRVYMKANNLLDDTVYqhASFLSN-----IPQVGRNFTVGVDFSF 691
Cdd:COG4772 631 ASYD----FGKNLSLFAGVNNLFDKRYI--ASRAPNyaagiRPGPPRTVYAGLRLKF 681
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
46-148 |
8.22e-15 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 70.76 E-value: 8.22e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 46 QDFAVADTVVDQKHL-SQGAATIGDALSSEVGIYA-NQFGAGSSRPVIRGQDGPRVKVLQNSSENIDVSTLSPDHAVIvD 123
Cdd:pfam07715 3 RDTPGSVSVVTAEDIeDQGATNLADALRGVPGVSVsSGGGGGGSSISIRGFGSNRVLVLVDGVPLNSGGGGSVDLNSI-D 81
|
90 100
....*....|....*....|....*
gi 1335750474 124 PVLAKQVEVIRGPSTLLFGAGTVGG 148
Cdd:pfam07715 82 PEDIERVEVLKGPASALYGSGAIGG 106
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
3-157 |
7.02e-10 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 62.09 E-value: 7.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 3 FYKNILTLSILAAISVPVFAAESENVE-KLETIRIKAHPLEQTSQDFAVADTVVDQKHLSQGAAT-IGDALSSEVGIYAN 80
Cdd:PRK13513 6 RKTHKAALVIAAAISSQAYAAEKTNTAtPTDTMVVTASGFQQRIQDAPASISVVTREQLENKAYRdVTDALKDVPGVVVT 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 81 qfGAGSSRPV-IRGQ---------DGPRVKVlQNSSENIDVSTLS----PDHAVIvdpvlaKQVEVIRGPSTLLFGAGTV 146
Cdd:PRK13513 86 --GGGSTSDIsIRGMaakytlilvDGKRVDT-RSTRPNSDGSGIEqgwlPPLAAI------ERIEVVRGPMSSLYGSDAM 156
|
170
....*....|.
gi 1335750474 147 GGLVNVIDNKI 157
Cdd:PRK13513 157 GGVINIITRKV 167
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
7-160 |
4.01e-09 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 59.79 E-value: 4.01e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 7 ILTLSILAAISVPVFAAESENVEKLETIRIKAHPLEQTSQDFAVADTVVDQKHLSQGA-ATIGDALSSEVGIyaNQFGAG 85
Cdd:PRK13483 9 ISALCLLPAVFVTHALAQAAPDKTMETVVVTASGYEQQIRDAPASISVITREDLENRFyRDLTDALLDVPGV--VVTGGG 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 86 SSRPV-IRGQ---------DGPRvkvlQNSSEN--------IDVSTLSPDHAVivdpvlaKQVEVIRGPSTLLFGAGTVG 147
Cdd:PRK13483 87 DRTDIsLRGMgsqytlilvDGKR----QSSRETrpnsdgpgVEQAWTPPLAAI-------ERIEVIRGPMSSLYGSDAIG 155
|
170
....*....|...
gi 1335750474 148 GLVNVIDNKIPTQ 160
Cdd:PRK13483 156 GVINIITRKVPNE 168
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
8-156 |
1.96e-07 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 54.26 E-value: 1.96e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 8 LTLSILAAISVPVFAAESENVEKLETIRI-KAHPLEQTSQDFAVADTVVDQKHL-SQGAATIGDALSSEVGIYANQfGAG 85
Cdd:PRK13486 1 MRITTLASVVIPCLGFSASSIAAAEDVMIvSASGYEKKLTNAAASVSVISQEELqSSQYHDLAEALRSVEGVDVES-GTG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 86 SSRPV---IRGQDGPRVKVL-----QNSSENIDVSTLSPDHAVIVDPVLA-KQVEVIRGPSTLLFGAGTVGGLVNVIDNK 156
Cdd:PRK13486 80 KTGGLeisIRGMPASYTLILidgvrQGGSSDVTPNGFSAMNTGFMPPLAAiERIEVIRGPMSTLYGSDAMGGVVNIITRK 159
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
1-172 |
2.19e-06 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 51.16 E-value: 2.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 1 MQFyKNILTLSILAAISVPVFAAESENVEKLETIRIKAHPLEQTSQDFAVADTVVDQKHLSQGAAT-IGDALSSEVGIYA 79
Cdd:PRK13484 1 MKN-KYIIAPGIAVMCSAVISSGYASSDKKEDTLVVTASGFTQQLRNAPASVSVITSEQLQKKPVSdLVDAVKDVEGISI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 80 NqfgAGSSRP--VIRGQDGPRVKVL-----QNSSENidvstlSPD-----HAVIVDPVLA-KQVEVIRGPSTLLFGAGTV 146
Cdd:PRK13484 80 T---GGNEKPdiSIRGLSGDYTLILvdgrrQSGRES------RPNgsggfEAGFIPPVEAiERIEVIRGPMSSLYGSDAI 150
|
170 180
....*....|....*....|....*.
gi 1335750474 147 GGLVNVIDNKIPTQMpengYEGQVGL 172
Cdd:PRK13484 151 GGVINIITKPVNNQT----WDGVLGL 172
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
377-569 |
1.26e-05 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 48.45 E-value: 1.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 377 GVIGAQLGQQKLDLTGEEAFMAPTTTKKWS-VFALEHKQWKDVHFELSARADqqeidvdDNSKQDFDGSafsYAGAANWE 455
Cdd:PRK10641 329 GNISAGVDWQKQTTTPGTGYVPDGYDQRNTgIYLTGQQQIGDVTLEGAARSD-------DNSQFGWHGT---WQTSAGWE 398
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 456 FVPNYKL------SFVAshqerlPLAQELYANGghfatntyelGNDQLSKEKSNNVELGLHFDNNKLDYHLHVYHNWFDD 529
Cdd:PRK10641 399 FIDGYRFiasygtAFKA------PNLGQLYGFY----------GNPNLKPEESKQWEGGFEGLTGPVNWRLSGYRNDIDN 462
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1335750474 530 YI-YAQTLDRYkdfrlvqYTQDKARFYGAE-------GEIGYQITPMY 569
Cdd:PRK10641 463 LIdYDDHTLKY-------YNVGKATIKGVEwtgnfdtGPLTHQVTLDY 503
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
40-223 |
4.09e-05 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 47.06 E-value: 4.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 40 PLEQTSQDFAVadtVVDQKHLSQGAATIGDALSSEVGIYANQFGAGSSRPV--IRG--QDGprvkvlQNSSENIDVSTLS 115
Cdd:PRK10044 75 PIEKTPQSISV---VTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHliIRGfaASG------QSQNNYLDGLKLQ 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 116 PDH--AVIVDPVLAKQVEVIRGPSTLLFGAGTVGGLVNVIdNKIPTQMPENGYEGQVGLR--YNTGSD--EKLASAGVtv 189
Cdd:PRK10044 146 GNFynDAVIDPYMLERAELMRGPVSVLYGKSNPGGLLNMV-SKRPTTEPLKEVQFKMGTDnlFQTGFDfsDALDDDGV-- 222
|
170 180 190
....*....|....*....|....*....|....
gi 1335750474 190 glgsqVALRVEGLTRDANNYiapnyiHEGEKERR 223
Cdd:PRK10044 223 -----YSYRLTGLARSANAQ------QKGSEEQR 245
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
122-207 |
5.39e-05 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 46.67 E-value: 5.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 122 VDPVLAKQVEVIRGPSTLLFGAGTVGGLVNVIdnkipTQMPENGYEGQVGLRYNTGSDEKlasagvtvglgsqvalrvEG 201
Cdd:PRK13528 139 VPPEMVERIEVIRGPAAARYGSGAAGGVVNII-----TKRPTNDWHGSLSLYTNQPESSK------------------EG 195
|
....*.
gi 1335750474 202 LTRDAN 207
Cdd:PRK13528 196 ATRRAN 201
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
14-157 |
1.44e-04 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 45.26 E-value: 1.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 14 AAISVPVFAAEsenvEKLETIRIKAHPLEQTSQDFAVADTVVDQKHLSQGAA-TIGDALSSEVGIYANQFGAGSSRPVIR 92
Cdd:PRK10064 17 ISCAWPVLAVD----DDGETMVVTASAVEQNLKDAPASISVITQEDLQRKPVqNLKDVLKEVPGVQLTNEGDNRKGVSIR 92
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1335750474 93 GQDGPRVKVLqnssenIDVSTLSPDHAVIVD--------PVLA-KQVEVIRGPSTLLFGAGTVGGLVNVIDNKI 157
Cdd:PRK10064 93 GLDSSYTLIL------IDGKRVNSRNAVFRHndfdlnwiPVDAiERIEVVRGPMSSLYGSDALGGVVNIITKKI 160
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
14-207 |
2.26e-04 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 44.41 E-value: 2.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 14 AAISVPVFAAESENVEKLETIRIKA---------HPLEQTSQDFAVADTVVDQKhlsQGAATIGDALSSEVGI---YANQ 81
Cdd:PRK09840 32 LAAEGQTNADDTLVVEASTPSLYAPdqsadpkfsQPLADTTQTITVISEQVIKD---QGATNLTEALRNVPGVgtfFAGE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 82 FGAGSSRPVI--RGQDgprvkvlqnSSENIDVSTLSPDHAVIVDPVLAKQVEVIRGPSTLLFGAGTVGGLVNVIdNKIPT 159
Cdd:PRK09840 109 NGNTTTGDAIymRGFD---------TSNSIYVDGIRDIGSISRDTFNTEQVEVIKGPSGTDYGRSAPTGSINMI-SKQPR 178
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1335750474 160 QmpENGYEGQVGLryntGS-DEKLASAGVTVGLGSQVALRVEGLTRDAN 207
Cdd:PRK09840 179 N--DSGIDASASI----GSaWFRRGTLDVNQVIGDTTAVRLNVMGEKTH 221
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
122-209 |
7.75e-04 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 42.87 E-value: 7.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 122 VDPVLAKQVEVIRGPSTLLFGAGTVGGLVNVIdNKIPTQMPEngYEGQVGLRYN----TGSD--EKLASAGVtvglgsqV 195
Cdd:PRK14050 153 IDPFMLERVEVLKGPASVLYGGSNPGGIVNMV-SKRPLDEPL--YYTEIGINSYgnafTGFDvgDKLSDDGT-------V 222
|
90
....*....|....
gi 1335750474 196 ALRVEGLTRDANNY 209
Cdd:PRK14050 223 RYRVTGKVAGGDNY 236
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
122-168 |
3.21e-03 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 40.78 E-value: 3.21e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 1335750474 122 VDPVLAKQVEVIRGPSTLLFGAGTVGGLVNVIdNKIPTQ-----------MPENGYEG 168
Cdd:PRK13524 141 VPPEMIERIEVLRGPAAARYGNGAAGGVVNII-TKKPTGewhgswntyfnAPEHKAEG 197
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
40-212 |
3.61e-03 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 40.65 E-value: 3.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 40 PLEQTSQDFAvadTVVDQKHLSQGAATIGDALSSEVGIYANQFGAGSSRPV--IRGQDGPRVKVLQNSSENIDvstlSPD 117
Cdd:PRK14049 75 PFLETPQSIS---SVTEQQLKDRNPQTLLETLAYTPGARVGAFGFDPRFDAffVRGFDVTYTGVFRDNLRQPG----ASS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1335750474 118 HAVIVDPVLAKQVEVIRGPSTLLFGAGTVGGLVNVIdNKIPTQMPENGYEGQVGL--RYNTGSDeklaSAGvTVGLGSQV 195
Cdd:PRK14049 148 SIFKTEPYGLEGVSILRGPSSALYGASGAGGLFNLI-TKRPTEEPLREVQVQYGTnnRYQGQFD----FSG-PVNETDPV 221
|
170 180
....*....|....*....|....*..
gi 1335750474 196 ALRVEGLTRDANN----------YIAP 212
Cdd:PRK14049 222 YYRLTGLLRDADTeqvgvpddraYIAP 248
|
|
| |
