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preprotein translocase subunit SecY [Prevotella intermedia]
Protein Classification
preprotein translocase subunit SecY ( domain architecture ID 11415179 )
preprotein translocase subunit SecY plays an essential role to facilitate protein translocation; it is a component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA
List of domain hits
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
4-433
0e+00
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 567.79
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 4 FIE TLKN CW KI ED LRKR L L V T ILFTAI YR F GS F I VL PGI N P GL L EK L QS Q TA GGL MS LL D MFSGGA F S KA SIFALGIMPY 83
Cdd:COG0201 1 MLS TLKN AF KI PE LRKR I L F T LGILIV YR L GS H I PV PGI D P AA L AQ L FA Q QS GGL LG LL N MFSGGA L S RF SIFALGIMPY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 84 I S ASI V MQLL A V AV P YFQKM Q R EGE S G H KKI NW YTR V LT IFIL L F QA PAYLIN L KTQAA G ALATGVNWTV F MISAS I I L A 163
Cdd:COG0201 81 I T ASI I MQLL T V VI P KLEEL Q K EGE E G R KKI TQ YTR Y LT VVLA L L QA FGIALG L RSGPP G GGLVIDPGIL F YLLTV I T L T 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 164 AG S MF IL WLGE R IT DK G V GNG V S I II MV GI I ARLP Q A FF Q EVSSRF T A it SGGLVMFIAEIIILYL V VCAAILLT Q GT R K 243
Cdd:COG0201 161 AG T MF LM WLGE Q IT ER G I GNG I S L II FA GI V ARLP S A LA Q IFELVR T G -- ELSILLLLLLLVLALA V IAFVVFVE Q AQ R R 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 244 IPVQYAK K VVG NKQ YGG ARQ Y I PLK LFA A N V M PIIFA QA L MFI P LA I V Q YSTD S AS -- PVLQSLMDTK S L LY NAI Y VV LI 321
Cdd:COG0201 239 IPVQYAK R VVG RRM YGG QST Y L PLK VNM A G V I PIIFA SS L LLF P AT I A Q FFGG S SG wl QWIANYLSPG S P LY IVL Y AL LI 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 322 VA FTYFYTAIT L NP TQM A EDM K RNN GFIPG VK PGK N TAEY I D S V M TRLT GP G SV F I A F IA VM P ALA G - LLN V Q dsfg QF F 400
Cdd:COG0201 319 IF FTYFYTAIT F NP EEI A DNL K KSG GFIPG IR PGK P TAEY L D K V L TRLT LV G AI F L A L IA IL P EIL G a ITG V P ---- FY F 394
410 420 430
....*....|....*....|....*....|...
gi 1276668479 401 GGTSLLI L VGV VI D SLQ QIES H L M MRHY D G L L N 433
Cdd:COG0201 395 GGTSLLI V VGV AL D TMK QIES Q L L MRHY E G F L K 427
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
4-433
0e+00
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 567.79
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 4 FIE TLKN CW KI ED LRKR L L V T ILFTAI YR F GS F I VL PGI N P GL L EK L QS Q TA GGL MS LL D MFSGGA F S KA SIFALGIMPY 83
Cdd:COG0201 1 MLS TLKN AF KI PE LRKR I L F T LGILIV YR L GS H I PV PGI D P AA L AQ L FA Q QS GGL LG LL N MFSGGA L S RF SIFALGIMPY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 84 I S ASI V MQLL A V AV P YFQKM Q R EGE S G H KKI NW YTR V LT IFIL L F QA PAYLIN L KTQAA G ALATGVNWTV F MISAS I I L A 163
Cdd:COG0201 81 I T ASI I MQLL T V VI P KLEEL Q K EGE E G R KKI TQ YTR Y LT VVLA L L QA FGIALG L RSGPP G GGLVIDPGIL F YLLTV I T L T 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 164 AG S MF IL WLGE R IT DK G V GNG V S I II MV GI I ARLP Q A FF Q EVSSRF T A it SGGLVMFIAEIIILYL V VCAAILLT Q GT R K 243
Cdd:COG0201 161 AG T MF LM WLGE Q IT ER G I GNG I S L II FA GI V ARLP S A LA Q IFELVR T G -- ELSILLLLLLLVLALA V IAFVVFVE Q AQ R R 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 244 IPVQYAK K VVG NKQ YGG ARQ Y I PLK LFA A N V M PIIFA QA L MFI P LA I V Q YSTD S AS -- PVLQSLMDTK S L LY NAI Y VV LI 321
Cdd:COG0201 239 IPVQYAK R VVG RRM YGG QST Y L PLK VNM A G V I PIIFA SS L LLF P AT I A Q FFGG S SG wl QWIANYLSPG S P LY IVL Y AL LI 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 322 VA FTYFYTAIT L NP TQM A EDM K RNN GFIPG VK PGK N TAEY I D S V M TRLT GP G SV F I A F IA VM P ALA G - LLN V Q dsfg QF F 400
Cdd:COG0201 319 IF FTYFYTAIT F NP EEI A DNL K KSG GFIPG IR PGK P TAEY L D K V L TRLT LV G AI F L A L IA IL P EIL G a ITG V P ---- FY F 394
410 420 430
....*....|....*....|....*....|...
gi 1276668479 401 GGTSLLI L VGV VI D SLQ QIES H L M MRHY D G L L N 433
Cdd:COG0201 395 GGTSLLI V VGV AL D TMK QIES Q L L MRHY E G F L K 427
SecY
pfam00344 SecY;
74-414
1.58e-126
SecY;
Pssm-ID: 459771
Cd Length: 322
Bit Score: 369.46
E-value: 1.58e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 74 S I FALGIMPYI S ASI V MQLL A V a V PYFQKMQR EGE S G H KKIN W YTR V LT IFIL L F QA PAYLI nlktqaag A L ATGVNWTV 153
Cdd:pfam00344 1 S L FALGIMPYI T ASI I MQLL G V - V ISLEELKK EGE E G R KKIN Q YTR Y LT VVLA L I QA IGIVL -------- S L GVYGGGGG 71
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 154 F MISASII L A AG S MF IL WLGE R IT DK G V GNG V S I II MV GI I ARLP Q AF FQEVSSR F TAITSGG L v MFIAEI II LYL V VCA 233
Cdd:pfam00344 72 F YLLIVLQ L T AG T MF LM WLGE Q IT KY G I GNG I S L II FA GI V ARLP S AF SGALIAL F RLGARSI L - PNLLLL II TLA V IAL 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 234 AIL L T Q GT R K IPVQYAK K VVG nkqyg G ARQ Y I PLKL FA A N V M PIIFA QA L MFI P LA I V Q YST dsa SPVLQSLM D TK S L LY 313
Cdd:pfam00344 151 VVY L Q Q AE R R IPVQYAK R VVG ----- G QSS Y L PLKL NY A G V I PIIFA SS L LSF P AT I A Q FFG --- LQFIAAAL D PG S P LY 222
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 314 NAI Y VV LI VA F T YFYTAIT L NP TQM AE DM K RNN GFIPG VK PGK N TA E Y I D S V MT R L T GP G SV F IAF IAV M P A L A G L L NVQ 393
Cdd:pfam00344 223 TVL Y AL LI IF F A YFYTAIT F NP KDI AE NL K KQG GFIPG IR PGK P TA K Y L D R V IP R I T LL G AL F LGI IAV L P D L L G A L TGV 302
330 340
....*....|....*....|.
gi 1276668479 394 DS fgq F FGGTSLLI L VGV VI D 414
Cdd:pfam00344 303 PF --- G FGGTSLLI V VGV AL D 320
3a0501s007
TIGR00967 preprotein translocase, SecY subunit; Members of this protein family are the SecY component of ...
18-428
1.35e-102
preprotein translocase, SecY subunit; Members of this protein family are the SecY component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA. This model does not discriminate bacterial from archaeal forms. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273369
Cd Length: 410
Bit Score: 311.53
E-value: 1.35e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 18 R KR LL V T ILFTAIY R F G S FI VL PGI NPGLLEK L QS Q TAG gl MS LL DM FSGGA FSKA SIFALGI M PYI S ASI VM QLL AVA V 97
Cdd:TIGR00967 1 R EK LL F T LGLLVLF R I G T FI PI PGI DASAFQN L IQ Q NPI -- FG LL NT FSGGA LGQI SIFALGI S PYI T ASI II QLL TGD V 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 98 P YFQKM Q - R EGE S G HK KIN WY TR V LT IFILLF Q APAYLINLKTQAA G ALATGVNWTVF misas I I L AA GSM FIL WLGE R I 176
Cdd:TIGR00967 79 P PLLQL Q k K EGE I G RR KIN QL TR Y LT LILAFI Q SLGIVMTGMYGYV G DPGAFFYLLIV ----- I Q L TT GSM IVM WLGE Q I 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 177 T DK G V GNG V S II I MV GI I A RL P QAFF Q EVSS R FTAITSG ---- GLVM F IAEI I ILYL V VCAAILLT Q GT RKIP V Q Y AK KV 252
Cdd:TIGR00967 154 T KY G I GNG I S LL I FA GI A A TI P SGLL Q PTEV R QSKVRDL isfl QNLP F LLYL I ATII V FAVVVFVQ Q AR RKIP I Q S AK RQ 233
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 253 V G NK qy G GARQ Y I PLKL FA A N V M P I IFA Q AL MFI P LA I V Q Y -- S TDSASPV L QSLM -- DTKSLLYNAI Y VV LI VA F TY FY 328
Cdd:TIGR00967 234 G G RR -- G SQST Y L PLKL NY A G V I P V IFA S AL LSN P AT I S Q F ln S NQGGAWF L NPIL sl SLSDPIGAIL Y LI LI IF F SF FY 311
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 329 TAIT LNP TQ MA EDM K RNNG FIPG VK PGK N T AE Y IDS V MT RLT GP GS V F IAF IA VM P ALA G - LLNVQD S F G qf F GGTSLLI 407
Cdd:TIGR00967 312 VELQ LNP ED MA KNL K KQGM FIPG IR PGK M T EK Y LKR V IP RLT FV GS L F LGL IA LL P NFL G a IGGLPT S K G -- L GGTSLLI 389
410 420
....*....|....*....|.
gi 1276668479 408 L VGV V ID SLQ Q I ES H L MM R H Y 428
Cdd:TIGR00967 390 V VGV A ID TYK Q L ES E L IS R N Y 410
secY
CHL00161 preprotein translocase subunit SecY; Validated
15-431
7.23e-94
preprotein translocase subunit SecY; Validated
Pssm-ID: 214379
Cd Length: 417
Bit Score: 289.21
E-value: 7.23e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 15 ED L RK RLL V T ILFTAIY R F G S FI VL PGI NPGL L EKLQ S QTA gg L MS LL DM FSGG A F SKASI FALGI M PYI S ASI VM QLL A 94
Cdd:CHL00161 8 DE L LN RLL F T LGLLLLI R L G T FI PV PGI DHTQ L YPSL S NNP -- L LN LL NT FSGG G F FVIGL FALGI L PYI N ASI II QLL T 85
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 95 VAV P YFQ K M Q R E - GE S G HK KIN W YTR V LT IFILLF Q APAYLIN LK TQA agalatg V NW - TVFMISASII L AA GSM FI LWL 172
Cdd:CHL00161 86 SII P SLE K L Q K E e GE A G RR KIN Q YTR Y LT LGWAII Q SIGISFW LK PYL ------- F NW n LLLALEIVLA L TS GSM IV LWL 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 173 G E R IT D KG V GNG V S II I MVG I IAR LP QAFFQEVS S RFTA IT SGGLVMFI aei IILYLVVCAA I L L TQGT RKIP VQY AK KV 252
Cdd:CHL00161 159 S E L IT E KG L GNG S S LL I FFN I VSN LP KLLQSLLF S LSAN IT ILSILLLL --- FLFFITLIGI I F L QEAI RKIP LIS AK QL 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 253 VGNKQYG g ARQ Y I PL K L FA A N VMPIIFA Q AL MFI P LAIVQYSTDSA - S P V L QSLMDTK S -- L LY NAI Y V VLI VA F T YFY T 329
Cdd:CHL00161 236 GKSSRLA - SNS Y L PL R L NQ A G VMPIIFA S AL LVL P GYLTNILLNQF l L P L L SLFLQLA S fk I LY LVL Y F VLI LF F S YFY S 314
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 330 A I T LNP TQMA E DMKRNNGF IPG VK PGK N T AE Y IDSVMT RLT GP G SV F I AFIA VM P A L AGLLNVQDS F g QFF G G TSLLILV 409
Cdd:CHL00161 315 T I V LNP KDIS E NLQKMAVS IPG IR PGK A T TK Y LKKTLN RLT LL G AL F L AFIA LL P N L IESVLNLSV F - KGL G T TSLLILV 393
410 420
....*....|....*....|..
gi 1276668479 410 GV V ID SLQ QI ESH L MMRH Y DGL 431
Cdd:CHL00161 394 GV A ID TSR QI QTY L ISNN Y ENM 415
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
4-433
0e+00
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 567.79
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 4 FIE TLKN CW KI ED LRKR L L V T ILFTAI YR F GS F I VL PGI N P GL L EK L QS Q TA GGL MS LL D MFSGGA F S KA SIFALGIMPY 83
Cdd:COG0201 1 MLS TLKN AF KI PE LRKR I L F T LGILIV YR L GS H I PV PGI D P AA L AQ L FA Q QS GGL LG LL N MFSGGA L S RF SIFALGIMPY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 84 I S ASI V MQLL A V AV P YFQKM Q R EGE S G H KKI NW YTR V LT IFIL L F QA PAYLIN L KTQAA G ALATGVNWTV F MISAS I I L A 163
Cdd:COG0201 81 I T ASI I MQLL T V VI P KLEEL Q K EGE E G R KKI TQ YTR Y LT VVLA L L QA FGIALG L RSGPP G GGLVIDPGIL F YLLTV I T L T 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 164 AG S MF IL WLGE R IT DK G V GNG V S I II MV GI I ARLP Q A FF Q EVSSRF T A it SGGLVMFIAEIIILYL V VCAAILLT Q GT R K 243
Cdd:COG0201 161 AG T MF LM WLGE Q IT ER G I GNG I S L II FA GI V ARLP S A LA Q IFELVR T G -- ELSILLLLLLLVLALA V IAFVVFVE Q AQ R R 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 244 IPVQYAK K VVG NKQ YGG ARQ Y I PLK LFA A N V M PIIFA QA L MFI P LA I V Q YSTD S AS -- PVLQSLMDTK S L LY NAI Y VV LI 321
Cdd:COG0201 239 IPVQYAK R VVG RRM YGG QST Y L PLK VNM A G V I PIIFA SS L LLF P AT I A Q FFGG S SG wl QWIANYLSPG S P LY IVL Y AL LI 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 322 VA FTYFYTAIT L NP TQM A EDM K RNN GFIPG VK PGK N TAEY I D S V M TRLT GP G SV F I A F IA VM P ALA G - LLN V Q dsfg QF F 400
Cdd:COG0201 319 IF FTYFYTAIT F NP EEI A DNL K KSG GFIPG IR PGK P TAEY L D K V L TRLT LV G AI F L A L IA IL P EIL G a ITG V P ---- FY F 394
410 420 430
....*....|....*....|....*....|...
gi 1276668479 401 GGTSLLI L VGV VI D SLQ QIES H L M MRHY D G L L N 433
Cdd:COG0201 395 GGTSLLI V VGV AL D TMK QIES Q L L MRHY E G F L K 427
SecY
pfam00344 SecY;
74-414
1.58e-126
SecY;
Pssm-ID: 459771
Cd Length: 322
Bit Score: 369.46
E-value: 1.58e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 74 S I FALGIMPYI S ASI V MQLL A V a V PYFQKMQR EGE S G H KKIN W YTR V LT IFIL L F QA PAYLI nlktqaag A L ATGVNWTV 153
Cdd:pfam00344 1 S L FALGIMPYI T ASI I MQLL G V - V ISLEELKK EGE E G R KKIN Q YTR Y LT VVLA L I QA IGIVL -------- S L GVYGGGGG 71
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 154 F MISASII L A AG S MF IL WLGE R IT DK G V GNG V S I II MV GI I ARLP Q AF FQEVSSR F TAITSGG L v MFIAEI II LYL V VCA 233
Cdd:pfam00344 72 F YLLIVLQ L T AG T MF LM WLGE Q IT KY G I GNG I S L II FA GI V ARLP S AF SGALIAL F RLGARSI L - PNLLLL II TLA V IAL 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 234 AIL L T Q GT R K IPVQYAK K VVG nkqyg G ARQ Y I PLKL FA A N V M PIIFA QA L MFI P LA I V Q YST dsa SPVLQSLM D TK S L LY 313
Cdd:pfam00344 151 VVY L Q Q AE R R IPVQYAK R VVG ----- G QSS Y L PLKL NY A G V I PIIFA SS L LSF P AT I A Q FFG --- LQFIAAAL D PG S P LY 222
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 314 NAI Y VV LI VA F T YFYTAIT L NP TQM AE DM K RNN GFIPG VK PGK N TA E Y I D S V MT R L T GP G SV F IAF IAV M P A L A G L L NVQ 393
Cdd:pfam00344 223 TVL Y AL LI IF F A YFYTAIT F NP KDI AE NL K KQG GFIPG IR PGK P TA K Y L D R V IP R I T LL G AL F LGI IAV L P D L L G A L TGV 302
330 340
....*....|....*....|.
gi 1276668479 394 DS fgq F FGGTSLLI L VGV VI D 414
Cdd:pfam00344 303 PF --- G FGGTSLLI V VGV AL D 320
3a0501s007
TIGR00967 preprotein translocase, SecY subunit; Members of this protein family are the SecY component of ...
18-428
1.35e-102
preprotein translocase, SecY subunit; Members of this protein family are the SecY component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA. This model does not discriminate bacterial from archaeal forms. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273369
Cd Length: 410
Bit Score: 311.53
E-value: 1.35e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 18 R KR LL V T ILFTAIY R F G S FI VL PGI NPGLLEK L QS Q TAG gl MS LL DM FSGGA FSKA SIFALGI M PYI S ASI VM QLL AVA V 97
Cdd:TIGR00967 1 R EK LL F T LGLLVLF R I G T FI PI PGI DASAFQN L IQ Q NPI -- FG LL NT FSGGA LGQI SIFALGI S PYI T ASI II QLL TGD V 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 98 P YFQKM Q - R EGE S G HK KIN WY TR V LT IFILLF Q APAYLINLKTQAA G ALATGVNWTVF misas I I L AA GSM FIL WLGE R I 176
Cdd:TIGR00967 79 P PLLQL Q k K EGE I G RR KIN QL TR Y LT LILAFI Q SLGIVMTGMYGYV G DPGAFFYLLIV ----- I Q L TT GSM IVM WLGE Q I 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 177 T DK G V GNG V S II I MV GI I A RL P QAFF Q EVSS R FTAITSG ---- GLVM F IAEI I ILYL V VCAAILLT Q GT RKIP V Q Y AK KV 252
Cdd:TIGR00967 154 T KY G I GNG I S LL I FA GI A A TI P SGLL Q PTEV R QSKVRDL isfl QNLP F LLYL I ATII V FAVVVFVQ Q AR RKIP I Q S AK RQ 233
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 253 V G NK qy G GARQ Y I PLKL FA A N V M P I IFA Q AL MFI P LA I V Q Y -- S TDSASPV L QSLM -- DTKSLLYNAI Y VV LI VA F TY FY 328
Cdd:TIGR00967 234 G G RR -- G SQST Y L PLKL NY A G V I P V IFA S AL LSN P AT I S Q F ln S NQGGAWF L NPIL sl SLSDPIGAIL Y LI LI IF F SF FY 311
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 329 TAIT LNP TQ MA EDM K RNNG FIPG VK PGK N T AE Y IDS V MT RLT GP GS V F IAF IA VM P ALA G - LLNVQD S F G qf F GGTSLLI 407
Cdd:TIGR00967 312 VELQ LNP ED MA KNL K KQGM FIPG IR PGK M T EK Y LKR V IP RLT FV GS L F LGL IA LL P NFL G a IGGLPT S K G -- L GGTSLLI 389
410 420
....*....|....*....|.
gi 1276668479 408 L VGV V ID SLQ Q I ES H L MM R H Y 428
Cdd:TIGR00967 390 V VGV A ID TYK Q L ES E L IS R N Y 410
secY
CHL00161 preprotein translocase subunit SecY; Validated
15-431
7.23e-94
preprotein translocase subunit SecY; Validated
Pssm-ID: 214379
Cd Length: 417
Bit Score: 289.21
E-value: 7.23e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 15 ED L RK RLL V T ILFTAIY R F G S FI VL PGI NPGL L EKLQ S QTA gg L MS LL DM FSGG A F SKASI FALGI M PYI S ASI VM QLL A 94
Cdd:CHL00161 8 DE L LN RLL F T LGLLLLI R L G T FI PV PGI DHTQ L YPSL S NNP -- L LN LL NT FSGG G F FVIGL FALGI L PYI N ASI II QLL T 85
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 95 VAV P YFQ K M Q R E - GE S G HK KIN W YTR V LT IFILLF Q APAYLIN LK TQA agalatg V NW - TVFMISASII L AA GSM FI LWL 172
Cdd:CHL00161 86 SII P SLE K L Q K E e GE A G RR KIN Q YTR Y LT LGWAII Q SIGISFW LK PYL ------- F NW n LLLALEIVLA L TS GSM IV LWL 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 173 G E R IT D KG V GNG V S II I MVG I IAR LP QAFFQEVS S RFTA IT SGGLVMFI aei IILYLVVCAA I L L TQGT RKIP VQY AK KV 252
Cdd:CHL00161 159 S E L IT E KG L GNG S S LL I FFN I VSN LP KLLQSLLF S LSAN IT ILSILLLL --- FLFFITLIGI I F L QEAI RKIP LIS AK QL 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 253 VGNKQYG g ARQ Y I PL K L FA A N VMPIIFA Q AL MFI P LAIVQYSTDSA - S P V L QSLMDTK S -- L LY NAI Y V VLI VA F T YFY T 329
Cdd:CHL00161 236 GKSSRLA - SNS Y L PL R L NQ A G VMPIIFA S AL LVL P GYLTNILLNQF l L P L L SLFLQLA S fk I LY LVL Y F VLI LF F S YFY S 314
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 330 A I T LNP TQMA E DMKRNNGF IPG VK PGK N T AE Y IDSVMT RLT GP G SV F I AFIA VM P A L AGLLNVQDS F g QFF G G TSLLILV 409
Cdd:CHL00161 315 T I V LNP KDIS E NLQKMAVS IPG IR PGK A T TK Y LKKTLN RLT LL G AL F L AFIA LL P N L IESVLNLSV F - KGL G T TSLLILV 393
410 420
....*....|....*....|..
gi 1276668479 410 GV V ID SLQ QI ESH L MMRH Y DGL 431
Cdd:CHL00161 394 GV A ID TSR QI QTY L ISNN Y ENM 415
secY
PRK12417 preprotein translocase subunit SecY; Reviewed
19-433
2.65e-39
preprotein translocase subunit SecY; Reviewed
Pssm-ID: 237095
Cd Length: 404
Bit Score: 145.91
E-value: 2.65e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 19 K RL L V T ILFTA IY RF GS F I VL P GIN pgllekl QSQTA GG LM S L L DMFS --- GG AFSKAS IF A LG IM P YISAS I VM QL LAV 95
Cdd:PRK12417 14 K KI L F T CFILF IY IL GS N I SI P FVS ------- YNDML GG HE S F L KIAA ant GG DLRTLN IF S LG LG P WMTSM I IL QL FSY 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 96 A v PYFQK M QREG E SG H KK inwy T R V LT IF I LLF Q AP A YLIN L KTQAAGALAT gvnwtvf MISASI IL AA G S MF IL WL GER 175
Cdd:PRK12417 87 R - KRDGL M KQTI E EQ H YR ---- E R I LT LI I AVI Q SL A VILS L PSKERISQTN ------- ILLNTL IL VT G T MF LV WL SDL 154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 176 ITDK G V G n G VSI I IM V GI I ARL PQ AFFQEVSSRFTA I TSGG L VMF I A e III LY LVV caail L TQ gt RK IP VQYAKKVVGN 255
Cdd:PRK12417 155 NARY G I G - G PMP I VL V SM I KSI PQ DVIEYIDASHIV I ILLI L LVI I T - LFF LY FIE ----- L VE -- YR IP YNDIMNHNRF 225
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 256 K Q Y ggar Q Y IPL KL FA A NV MPI IFAQA L MFI P LA I VQ ----- YSTD S ASPVLQSLMDTK S L L YNAI Y VV L IVAFT YF YTA 330
Cdd:PRK12417 226 K M Y ---- S Y LSI KL NP A GG MPI MYSMS L LVF P QY I II lilsi FPNN S GISADMDMLSFG S P L GVTV Y LI L QFLLS YF FSF 301
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 331 ITL N PT Q M A E DM KRNNGF IPGV K PGK N T AE Y IDSVMT R LTGP G SV F IAF IA VM P ALAG L LNVQD S FGQF F G G t SLLIL VG 410
Cdd:PRK12417 302 VNI N TK Q I A K DM LKSGNY IPGV Y PGK D T ER Y LNYIAR R FSWF G AL F VTV IA GI P LYFT L FDPHL S TEIY F S G - QFMMF VG 380
410 420
....*....|....*....|...
gi 1276668479 411 VVIDSLQQ I ESH L MMRH Y DG LLN 433
Cdd:PRK12417 381 MSFNIADE I RAL L YFDK Y KP LLN 403
PRK08568
PRK08568 preprotein translocase subunit SecY; Reviewed
17-426
7.93e-20
preprotein translocase subunit SecY; Reviewed
Pssm-ID: 236293
Cd Length: 462
Bit Score: 91.44
E-value: 7.93e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 17 LRKR L LV T ILFTAI Y RFGSF I V L P GI npglleklq SQ TAGG L MS LL DMFSG G A F sk ASIFA LGI M P YIS A S I VM QLL AVA 96
Cdd:PRK08568 26 FKEK L KW T AIVLIL Y FILTN I P L Y GI --------- SQ SSQD L FE LL RIIFA G S F -- GTLLQ LGI G P IVT A G I IL QLL VGS 94
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 97 vp YFQKMQREGESGHKKINWYTRV L T I FILLFQ A PAYLI -- NLKTQAAG A LATGVNWTV F misas II L AA G SMF I LW L G E 174
Cdd:PRK08568 95 -- KLINLDLSDPEDRALFQGLQKL L A I VMIALE A APFVL ag AFGPATGL A STPLLALLI F ----- LQ L FL G GIL I IL L D E 167
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 175 RITDK G V G N G V S II I MV G IIARLPQAF F QEVSSR ----------- F T AITSG ------------- G L VMF I AE I I I LYL V 230
Cdd:PRK08568 168 LVSKW G I G S G I S LF I LA G VSQTIFVGL F NWLTGG qglpvgfipal F S AITSG nltlalllttrgl L L LGL I TT I V I FLI V 247
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 231 V CA aillt QGT R - K IP VQYA kkvvgnk QYG GAR QYI PLK LFAAN V M P I I FAQ AL --------- MFIP L A I V --- Q Y STDS 297
Cdd:PRK08568 248 V YL ----- ESM R v E IP LSHG ------- RVR GAR GRY PLK FIYVS V L P V I LVR AL qaniqlfgq LLQR L G I P ilg T Y DSSG 315
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 298 ASP V ------------ LQSLMD -- TKSLL Y NAIYV VL IVA F TY F YTAI T - L N P TQM A EDMKRNNGF IPG V kpg KNTAEY I 362
Cdd:PRK08568 316 ASP I sglayylspphs PYDWIQ dp LRAII Y ALFMI VL SIL F AI F WVET T g L D P KTQ A RQLQNSGMQ IPG F --- RRNPKV I 392
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1276668479 363 DS V MT R ---- L T GP G SVFIAFI AV MPA L A G L L N vqdsfgqff GGT S LL IL V GV V ------ I DSL Q QI E SHLMM R 426
Cdd:PRK08568 393 EK V LE R yipp V T VI G GAIVGLL AV LAD L L G A L G --------- GGT G LL LT V SI V yqlyee I ARE Q LM E MYPLL R 457
PTZ00219
PTZ00219 Sec61 alpha subunit; Provisional
69-283
8.93e-03
Sec61 alpha subunit; Provisional
Pssm-ID: 185519 [Multi-domain]
Cd Length: 474
Bit Score: 38.45
E-value: 8.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 69 A FSKASIFA LGI M P YISA S I VMQLLA VA -- VPYF Q KMQREGE -- S G HK K I nwytrv L TIF I L L FQ A P AY LI nlktqa A G A 144
Cdd:PTZ00219 72 A SNRGTLME LGI S P IVTS S M VMQLLA GS ki IDVD Q NNKEDRA lf E G AQ K L ------ L GLL I T L GE A V AY VW ------ S G M 139
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 145 LATGVNWTVFMISAS I I - L AAGSMFILW L G E RITDK - G V G N G V S II I MVG I ----------------------------- 193
Cdd:PTZ00219 140 YGDISEIGAGNAILI I L q L FFAGIVVIL L D E LLQKG y G L G S G I S LF I ATN I cetiiwkafspttintgrgtefegaiial 219
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276668479 194 ---------- IAR L PQ AF FQEVSSRF T AITSGG LV M fiae IIIL Y L vvcaaillt QG T R - KI P VQYA K K vvgnkqy G G AR 262
Cdd:PTZ00219 220 fhllftrsdk LRA L KE AF YRPHLPNL T NLLATV LV F ---- LVVI Y F --------- QG F R v DL P LKSQ K V ------- R G QQ 279
250 260
....*....|....*....|.
gi 1276668479 263 Q YI P L KLF AANVM PII FAQ AL 283
Cdd:PTZ00219 280 Q SY P I KLF YTSNI PII LQT AL 300
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
