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Conserved domains on  [gi|1274918280|gb|ATS04250|]
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hypothetical protein CS374_04110 [Porphyromonas gingivalis]

Protein Classification

OmpA family protein( domain architecture ID 13801009)

OmpA family membrane protein acts as a porin with low permeability that allows slow penetration of small solutes, similar to peptidoglycan-associated lipoprotein that is involved in maintenance of the integrity of the cell cell envelope

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3868 pfam12984
Domain of unknown function, B. Theta Gene description (DUF3868); Based on Bacteroides ...
 4-109 6.73e-40

Domain of unknown function, B. Theta Gene description (DUF3868); Based on Bacteroides thetaiotaomicron gene BT_1065, a putative uncharacterized protein As seen in gene expression experiments (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE2231), It appears to be upregulated in the presence of host or other bacterial species vs when in culture.


:

Pssm-ID: 432918  Cd Length: 109  Bit Score: 139.54  E-value: 6.73e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274918280   4 IQLTLIALFAAVAGLV--AQNAYEGVISYK-ISLDKTGNKVVLNGAADMSNLKLKSTQMIIVTPILRSEDGTSRVEFPSV 80
Cdd:pfam12984   1 KKKTFILLSLAICGLVaqAQNAYEGVISVKpHQLEVRGDSVFVNMDIDLENVKLKSKQMVILTPILRSQDGTELQQLPKV 80

                          90       100
                  ....*....|....*....|....*....
gi 1274918280  81 VITGRNRTKALKREIAFSSALPQAKHAAQ 109
Cdd:pfam12984  81 VIKGRNRYKAYKRNLALRSAKESKSSNTA 109
OmpA_C-like super family cl30079
Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; ...
 195-285 1.69e-10

Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.


The actual alignment was detected with superfamily member cd07185:

Pssm-ID: 453091 [Multi-domain]  Cd Length: 106  Bit Score: 57.95  E-value: 1.69e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274918280 195 INFKVNKADVLPEYRnnkaelEKIKEFVSTVKANPNYSVnkmIIEGFASPEASIAHNKALSERRAKRLAEELVRKYGKTl 274
Cdd:cd07185     4 IYFDFGSAELTPEAK------PLLDKLAEVLKKNPDAKI---RIEGHTDSRGSDAYNQELSERRAEAVADYLVSKGVDA- 73

                          90
                  ....*....|.
gi 1274918280 275 PNITTEFGGED 285
Cdd:cd07185    74 SRITAVGYGES 84
PEP_TPR_lipo super family cl37187
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ...
 356-460 1.05e-05

putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.


The actual alignment was detected with superfamily member TIGR02917:

Pssm-ID: 274350 [Multi-domain]  Cd Length: 899  Bit Score: 48.16  E-value: 1.05e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274918280 356 LEEAREIIKTAPKELsEAEMYRVAMSYPEG-HQERLFALNTTLKYFPESVTGRINLAVAAFKGGDAQQAIALLSPI---- 430
Cdd:TIGR02917 281 RETLQDALKSAPEYL-PALLLAGASEYQLGnLEQAYQYLNQILKYAPNSHQARRLLASIQLRLGRVDEAIATLSPAlgld 359

                          90       100       110
                  ....*....|....*....|....*....|
gi 1274918280 431 QTEKGVSNILGAAYARTGDFARAETFFRKA 460
Cdd:TIGR02917 360 PDDPAALSLLGEAYLALGDFEKAAEYLAKA 389
 
Name Accession Description Interval E-value
DUF3868 pfam12984
Domain of unknown function, B. Theta Gene description (DUF3868); Based on Bacteroides ...
 4-109 6.73e-40

Domain of unknown function, B. Theta Gene description (DUF3868); Based on Bacteroides thetaiotaomicron gene BT_1065, a putative uncharacterized protein As seen in gene expression experiments (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE2231), It appears to be upregulated in the presence of host or other bacterial species vs when in culture.


Pssm-ID: 432918  Cd Length: 109  Bit Score: 139.54  E-value: 6.73e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274918280   4 IQLTLIALFAAVAGLV--AQNAYEGVISYK-ISLDKTGNKVVLNGAADMSNLKLKSTQMIIVTPILRSEDGTSRVEFPSV 80
Cdd:pfam12984   1 KKKTFILLSLAICGLVaqAQNAYEGVISVKpHQLEVRGDSVFVNMDIDLENVKLKSKQMVILTPILRSQDGTELQQLPKV 80

                          90       100
                  ....*....|....*....|....*....
gi 1274918280  81 VITGRNRTKALKREIAFSSALPQAKHAAQ 109
Cdd:pfam12984  81 VIKGRNRYKAYKRNLALRSAKESKSSNTA 109
OmpA_C-like cd07185
Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; ...
 195-285 1.69e-10

Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.


Pssm-ID: 143586 [Multi-domain]  Cd Length: 106  Bit Score: 57.95  E-value: 1.69e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274918280 195 INFKVNKADVLPEYRnnkaelEKIKEFVSTVKANPNYSVnkmIIEGFASPEASIAHNKALSERRAKRLAEELVRKYGKTl 274
Cdd:cd07185     4 IYFDFGSAELTPEAK------PLLDKLAEVLKKNPDAKI---RIEGHTDSRGSDAYNQELSERRAEAVADYLVSKGVDA- 73

                          90
                  ....*....|.
gi 1274918280 275 PNITTEFGGED 285
Cdd:cd07185    74 SRITAVGYGES 84
OmpA COG2885
Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall ...
 195-275 1.44e-09

Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442131 [Multi-domain]  Cd Length: 294  Bit Score: 59.03  E-value: 1.44e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274918280 195 INFKVNKADVLPEYRnnkaelEKIKEFVSTVKANPNYSVnkmIIEGFASPEASIAHNKALSERRAKRLAEELVRK----- 269
Cdd:COG2885   189 VYFDFDSAELTPEAK------AALDELAALLKENPDLRI---EIEGHTDSRGSDAYNLALSERRAEAVKDYLVSKgipas 259

                          90
                  ....*....|..
gi 1274918280 270 ------YGKTLP 275
Cdd:COG2885   260 ritavgYGESRP 271
PEP_TPR_lipo TIGR02917
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ...
 356-460 1.05e-05

putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.


Pssm-ID: 274350 [Multi-domain]  Cd Length: 899  Bit Score: 48.16  E-value: 1.05e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274918280 356 LEEAREIIKTAPKELsEAEMYRVAMSYPEG-HQERLFALNTTLKYFPESVTGRINLAVAAFKGGDAQQAIALLSPI---- 430
Cdd:TIGR02917 281 RETLQDALKSAPEYL-PALLLAGASEYQLGnLEQAYQYLNQILKYAPNSHQARRLLASIQLRLGRVDEAIATLSPAlgld 359

                          90       100       110
                  ....*....|....*....|....*....|
gi 1274918280 431 QTEKGVSNILGAAYARTGDFARAETFFRKA 460
Cdd:TIGR02917 360 PDDPAALSLLGEAYLALGDFEKAAEYLAKA 389
Spy COG3914
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ...
 386-476 2.83e-04

Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443119 [Multi-domain]  Cd Length: 658  Bit Score: 43.44  E-value: 2.83e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274918280 386 HQERLFALNTTLKYFPESVTGRINLAVAAFKGGDAQQAIAL------LSPIQTEkgVSNILGAAYARTGDFARAETFFRK 459
Cdd:COG3914    94 YEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAAlrralaLNPDFAE--AYLNLGEALRRLGRLEEAIAALRR 171

                          90
                  ....*....|....*....
gi 1274918280 460 AVA--EGDANAQRNLDMLL 476
Cdd:COG3914   172 ALEldPDNAEALNNLGNAL 190
 
Name Accession Description Interval E-value
DUF3868 pfam12984
Domain of unknown function, B. Theta Gene description (DUF3868); Based on Bacteroides ...
 4-109 6.73e-40

Domain of unknown function, B. Theta Gene description (DUF3868); Based on Bacteroides thetaiotaomicron gene BT_1065, a putative uncharacterized protein As seen in gene expression experiments (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE2231), It appears to be upregulated in the presence of host or other bacterial species vs when in culture.


Pssm-ID: 432918  Cd Length: 109  Bit Score: 139.54  E-value: 6.73e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274918280   4 IQLTLIALFAAVAGLV--AQNAYEGVISYK-ISLDKTGNKVVLNGAADMSNLKLKSTQMIIVTPILRSEDGTSRVEFPSV 80
Cdd:pfam12984   1 KKKTFILLSLAICGLVaqAQNAYEGVISVKpHQLEVRGDSVFVNMDIDLENVKLKSKQMVILTPILRSQDGTELQQLPKV 80

                          90       100
                  ....*....|....*....|....*....
gi 1274918280  81 VITGRNRTKALKREIAFSSALPQAKHAAQ 109
Cdd:pfam12984  81 VIKGRNRYKAYKRNLALRSAKESKSSNTA 109
OmpA_C-like cd07185
Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; ...
 195-285 1.69e-10

Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.


Pssm-ID: 143586 [Multi-domain]  Cd Length: 106  Bit Score: 57.95  E-value: 1.69e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274918280 195 INFKVNKADVLPEYRnnkaelEKIKEFVSTVKANPNYSVnkmIIEGFASPEASIAHNKALSERRAKRLAEELVRKYGKTl 274
Cdd:cd07185     4 IYFDFGSAELTPEAK------PLLDKLAEVLKKNPDAKI---RIEGHTDSRGSDAYNQELSERRAEAVADYLVSKGVDA- 73

                          90
                  ....*....|.
gi 1274918280 275 PNITTEFGGED 285
Cdd:cd07185    74 SRITAVGYGES 84
OmpA COG2885
Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall ...
 195-275 1.44e-09

Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442131 [Multi-domain]  Cd Length: 294  Bit Score: 59.03  E-value: 1.44e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274918280 195 INFKVNKADVLPEYRnnkaelEKIKEFVSTVKANPNYSVnkmIIEGFASPEASIAHNKALSERRAKRLAEELVRK----- 269
Cdd:COG2885   189 VYFDFDSAELTPEAK------AALDELAALLKENPDLRI---EIEGHTDSRGSDAYNLALSERRAEAVKDYLVSKgipas 259

                          90
                  ....*....|..
gi 1274918280 270 ------YGKTLP 275
Cdd:COG2885   260 ritavgYGESRP 271
PEP_TPR_lipo TIGR02917
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ...
 356-460 1.05e-05

putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.


Pssm-ID: 274350 [Multi-domain]  Cd Length: 899  Bit Score: 48.16  E-value: 1.05e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274918280 356 LEEAREIIKTAPKELsEAEMYRVAMSYPEG-HQERLFALNTTLKYFPESVTGRINLAVAAFKGGDAQQAIALLSPI---- 430
Cdd:TIGR02917 281 RETLQDALKSAPEYL-PALLLAGASEYQLGnLEQAYQYLNQILKYAPNSHQARRLLASIQLRLGRVDEAIATLSPAlgld 359

                          90       100       110
                  ....*....|....*....|....*....|
gi 1274918280 431 QTEKGVSNILGAAYARTGDFARAETFFRKA 460
Cdd:TIGR02917 360 PDDPAALSLLGEAYLALGDFEKAAEYLAKA 389
Spy COG3914
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ...
 386-476 2.83e-04

Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443119 [Multi-domain]  Cd Length: 658  Bit Score: 43.44  E-value: 2.83e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274918280 386 HQERLFALNTTLKYFPESVTGRINLAVAAFKGGDAQQAIAL------LSPIQTEkgVSNILGAAYARTGDFARAETFFRK 459
Cdd:COG3914    94 YEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAAlrralaLNPDFAE--AYLNLGEALRRLGRLEEAIAALRR 171

                          90
                  ....*....|....*....
gi 1274918280 460 AVA--EGDANAQRNLDMLL 476
Cdd:COG3914   172 ALEldPDNAEALNNLGNAL 190
BepA COG4783
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ...
 366-476 3.11e-04

Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443813 [Multi-domain]  Cd Length: 139  Bit Score: 40.95  E-value: 3.11e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274918280 366 APKELSEAEMYRVAMSYPEGHQerlfALNTTLKYFPESVTGRINLAVAAFKGGDAQQAIALL------SPiqTEKGVSNI 439
Cdd:COG4783     4 AEALYALAQALLLAGDYDEAEA----LLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLhealelDP--DEPEARLN 77

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1274918280 440 LGAAYARTGDFARAETFFRKAVAE--GDANAQRNLDMLL 476
Cdd:COG4783    78 LGLALLKAGDYDEALALLEKALKLdpEHPEAYLRLARAY 116
NrfG COG4235
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ...
 392-470 1.93e-03

Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443378 [Multi-domain]  Cd Length: 131  Bit Score: 38.45  E-value: 1.93e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274918280 392 ALNTTLKYFPESVTGRINLAVAAFKGGDAQQAIALLSPIQ----TEKGVSNILGAAYARTGDFARAETFFRKAVAEGDAN 467
Cdd:COG4235    39 AYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALaldpDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPAD 118


                  ...
gi 1274918280 468 AQR 470
Cdd:COG4235   119 APA 121
Spy COG3914
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ...
 392-462 1.97e-03

Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443119 [Multi-domain]  Cd Length: 658  Bit Score: 40.75  E-value: 1.97e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1274918280 392 ALNTTLKYFPESVTGRINLAVAAFKGGDAQQAIAL------LSPIQTEkgVSNILGAAYARTGDFARAETFFRKAVA 462
Cdd:COG3914   134 ALRRALALNPDFAEAYLNLGEALRRLGRLEEAIAAlrraleLDPDNAE--ALNNLGNALQDLGRLEEAIAAYRRALE 208
LapB COG2956
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ...
 392-471 2.56e-03

Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442196 [Multi-domain]  Cd Length: 275  Bit Score: 39.71  E-value: 2.56e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274918280 392 ALNTTLKYFPESVTGRINLAVAAFKGGDAQQAIALLSPIQTEK----GVSNILGAAYARTGDFARAETFFRKAVAEGDAN 467
Cdd:COG2956   166 ALEKALKLDPDCARALLLLAELYLEQGDYEEAIAALERALEQDpdylPALPRLAELYEKLGDPEEALELLRKALELDPSD 245


                  ....
gi 1274918280 468 AQRN 471
Cdd:COG2956   246 DLLL 249
TPR COG0457
Tetratricopeptide (TPR) repeat [General function prediction only];
397-472 7.47e-03

Tetratricopeptide (TPR) repeat [General function prediction only];


Pssm-ID: 440225 [Multi-domain]  Cd Length: 245  Bit Score: 38.06  E-value: 7.47e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274918280 397 LKYFPESVTGRINLAVAAFKGGDAQQAIALLspiqtEKGVS---------NILGAAYARTGDFARAETFFRKAVAE--GD 465
Cdd:COG0457     1 LELDPDDAEAYNNLGLAYRRLGRYEEAIEDY-----EKALEldpddaealYNLGLAYLRLGRYEEALADYEQALELdpDD 75


                  ....*..
gi 1274918280 466 ANAQRNL 472
Cdd:COG0457    76 AEALNNL 82
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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