|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 672.82 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 1 MLKILTPTIFLLLSTWLTPSKHLWSTSLLHSLVIATASLSWLISSTETGSSFLGTYMATDPLSTPLLVLTCWLLPLMIIA 80
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 81 SQNHVATEPVNRQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 161 LLVALLVFQTSAGTLSFLTISSITPTPLDSWASKAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 241 GYGMMRILVILEPLTKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAH 320
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVWTIALTGLG 400
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1199278046 401 TLITAGYSLYMFLMTQRGPLPNHLLSLDPSHSREHLLITLHLLPLLLLIFKPELTWGW 458
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGW 458
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 666.23 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 1 MLKILTPTIFLLLSTWLTPSKHLWSTSLLHSLVIATASLSWLISSTETgSSFLGTYMATDPLSTPLLVLTCWLLPLMIIA 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSET-MNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 81 SQNHVATEPVNRQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00068 80 SQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 161 LLVALLVFQTSAGTLSFLTISSITPTPLDSWASKAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 241 GYGMMRILVILEPLTKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAH 320
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVWTIALTGLG 400
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1199278046 401 TLITAGYSLYMFLMTQRGPLPNHLLSLDPSHSREHLLITLHLLPLLLLIFKPELTWGWM 459
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGMF 458
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 654.96 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 1 MLKILTPTIFLLLSTWLTPSKHLWSTSLLHSLVIATASLSWLISSTETgSSFLGTYMATDPLSTPLLVLTCWLLPLMIIA 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYP-TKNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 81 SQNHVATEPVNRQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00124 80 SQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 161 LLVALLVFQTSAGTLSFLTISSITPTPLDSWASKAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 241 GYGMMRILVILEPLTKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAH 320
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVWTIALTGLG 400
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1199278046 401 TLITAGYSLYMFLMTQRGPLPNHLLSLDPSHSREHLLITLHLLPLLLLIFKPELTWGW 458
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-434 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 634.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 1 MLKILTPTIFLLLSTWLTPSKHLWSTSLLHSLVIATASLSWLISSTETGSSFlGTYMATDPLSTPLLVLTCWLLPLMIIA 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNF-SLLFFSDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 81 SQNHVATEPVNRQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00110 80 SQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 161 LLVALLVFQTSAGTLSFLTISSITPTPLDSWASKAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 241 GYGMMRILVILEPLTKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAH 320
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVWTIALTGLG 400
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430
....*....|....*....|....*....|....
gi 1199278046 401 TLITAGYSLYMFLMTQRGPLPNHLLSLDPSHSRE 434
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTRE 433
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 532.59 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 3 KILTPTIFLLLSTWLTPSKHLWSTSLLHSLVIATASLSWLISSTETGSSFLGTYMATDPLSTPLLVLTCWLLPLMIIASQ 82
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 83 NHVATEPVNRQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLL 162
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 163 VALLVFQTSAGTLSFLTISSITPTpldSWASKAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 242
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 243 GMMRILVILEPLTKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGL 322
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 323 TSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVWTIALTGLGTL 402
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1199278046 403 ITAGYSLYMFLMTQRGPLPNHLLSLDPSHSREHLLITLHLLPLLLLIFKPEL 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNL 449
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-434 |
2.06e-167 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 479.09 E-value: 2.06e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 1 MLKILTPTIFLLLSTWLTPSKHLWSTSLLHSLVIATASLSWLISSTETGSSFLGTYMATDPLSTPLLVLTCWLLPLMIIA 80
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 81 SQNHVATEPVNRQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 161 LLVALLVFQTSAGTLSFLTISSITPTPLDSWASKAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 241 GYGMMRILVIL-EPLTKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIA 319
Cdd:MTH00044 241 GYGLIRLINLFsLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 320 HGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVWTIALTGL 399
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430
....*....|....*....|....*....|....*
gi 1199278046 400 GTLITAGYSLYMFLMTQRGPLPNHLLSLDPSHSRE 434
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSRE 435
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
53-459 |
1.94e-125 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 370.71 E-value: 1.94e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 53 LGTYMATDPLSTPLLVLTCWLLPLMIIASQNHVatEPVNRQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLI 132
Cdd:MTH00150 16 LSELFSVDSMSSLLISLSLWISGLMMLASQKSV--KLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 133 IITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVFQTSAGTLSFLTISSITPTPLDSWAskaWWVACLLAFLVKMPLYG 212
Cdd:MTH00150 94 LILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMGL---WGLLVFLAFLVKLPMYP 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 213 AHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVILEPLTKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSV 292
Cdd:MTH00150 171 FHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSV 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 293 SHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPP 372
Cdd:MTH00150 251 GHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPP 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 373 LPNLMGELMIISSLFNWSVWTIALTGLGTLITAGYSLYMFLMTQRGPLPNHLLSLDPSHSREHLLITLHLLPLLLLIFKP 452
Cdd:MTH00150 331 SLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKS 410
|
....*..
gi 1199278046 453 ELTWGWM 459
Cdd:MTH00150 411 DLLFMWI 417
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-434 |
9.76e-124 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 367.17 E-value: 9.76e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 1 MLKILTPTIFLLLSTWLtpskhLWSTSLLHSLVIATASLSWLISSTETGSSFLGTYMATDPLSTPLLVLTCWLLPLMIIA 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFL-----KNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 81 SQNHVATepVNRQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00163 76 SESVYKK--NNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 161 LLVALLVFQTSAGTLSFLTISSItptpldSWASKAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00163 154 LLVGIFYLYNNSGSLSFFLLNFF------GSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 241 GYGMMRILVILEPLTKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAH 320
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGH 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVWTIALTGLG 400
Cdd:MTH00163 308 GLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLL 387
|
410 420 430
....*....|....*....|....*....|....
gi 1199278046 401 TLITAGYSLYMFLMTQRGPLPNHLLSLDPSHSRE 434
Cdd:MTH00163 388 SFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVRE 421
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-459 |
2.67e-115 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 345.96 E-value: 2.67e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 1 MLKILTPTIFLLLSTwLTPSKHLWSTSLLHSLVIATASLSWLISSTeTGSSFLGTYMATDPLSTPLLVLTCWLLPLMIIA 80
Cdd:MTH00014 1 MLKLIMPLISLLLLP-LIKYPWSWALTFSTLLLLSLFTLLNLYPMS-APYSMFTESLSSDMLSAPLITLTLWITALMILA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 81 SQNHVATEpvNRQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00014 79 SFKIFQNN--KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLP 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 161 LLVALLVFQTSAGTLSFLTISSITPTPLdswASKAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00014 157 LLMSILLIFYTNNSLSMLMSSMEPPSIY---LMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 241 GYGMMRILVILEPLTKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAH 320
Cdd:MTH00014 234 GYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAH 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVWTIALTGLG 400
Cdd:MTH00014 314 GLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAIT 393
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1199278046 401 TLITAGYSLYMFLMTQRGPLPNHLLSLDPSHSREHLLITLHLLPLLLLIFKPELTWGWM 459
Cdd:MTH00014 394 SFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNWL 452
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
8-434 |
1.16e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 336.57 E-value: 1.16e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 8 TIFLLLSTWLTPSKHLWSTsLLHSLVIATASLSWLISSTETGSSFLGTYMATDPLSTPLLVLTCWLLPLMIIASQNHVat 87
Cdd:MTH00205 5 GVFSLLIILFVLKFKDWSF-FSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVF-- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 88 EPVNRQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLV 167
Cdd:MTH00205 82 KSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFF 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 168 FQTSAGTLSFLTISSITPTpldSWASKAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI 247
Cdd:MTH00205 162 LNSLNFSLSMFFNFPLNFS---DFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRI 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 248 LVILEPLTKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSAL 327
Cdd:MTH00205 239 TSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGM 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 328 FCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVWTIALTGLGTLITAGY 407
Cdd:MTH00205 319 FALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAY 398
|
410 420
....*....|....*....|....*..
gi 1199278046 408 SLYMFLMTQRGPLPNHLLSLDPSHSRE 434
Cdd:MTH00205 399 SLYLYSQSQHGKVSSQISSFLAISERE 425
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
56-434 |
2.18e-95 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 295.84 E-value: 2.18e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 56 YMATDPLSTPLLVLTCWLLPLMIIASQNHVAtepvNRQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIIT 135
Cdd:COG1008 77 HLGVDGISLPLVLLTALLTPLAILASWNEIK----KRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 136 RWGNQmERLNAGTYFLFYTLAGSLPLLVALLVFQTSAGTLSFLtISSITPTPLDSWASKAWWVACLLAFLVKMPLYGAHL 215
Cdd:COG1008 153 IWGGE-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFD-IAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHT 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 216 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVILEPL-TKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSH 294
Cdd:COG1008 231 WLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSH 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 295 MGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLP 374
Cdd:COG1008 311 MGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTS 390
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 375 NLMGELMIISSLFNWSVWTIALTGLGTLITAGYSLYMFLMTQRGPLPNHLLSLDPSHSRE 434
Cdd:COG1008 391 GFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRE 450
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
56-434 |
2.21e-86 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 272.85 E-value: 2.21e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 56 YMATDPLSTPLLVLTCWLLPLMIIASQNHVatepVNRQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIIT 135
Cdd:PRK05846 77 HLGVDGISLLLVVLTALLTPLAVLASWEEI----KKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 136 RWGNQmERLNAGTYFLFYTLAGSLPLLVALL----VFQTSAGTLSFLTISSitpTPLDSWASKAWWVACLLAFLVKMPLY 211
Cdd:PRK05846 153 VWGGK-NRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDIADLLN---LPLPPGVQYWLFLAFFIAFAVKMPMF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 212 GAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVILEPL-TKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYS 290
Cdd:PRK05846 229 PLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 291 SVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLAL 370
Cdd:PRK05846 309 SISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGL 388
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1199278046 371 PPLPNLMGELMIISSLFNWSVWTIALTGLGTLITAGYSLYMFLMTQRGPLPNHLLSLDPSHSRE 434
Cdd:PRK05846 389 PGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRE 452
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-423 |
5.25e-82 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 261.03 E-value: 5.25e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 57 MATDPLSTPLLVLTCWLLPLMIIASQNHVAtepvNRQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITR 136
Cdd:TIGR01972 73 LGVDGISLLLVLLTALLTLLAILASWESIQ----KRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 137 WGNQmERLNAGTYFLFYTLAGSLPLLVALLVFQTSAGtLSFlTISSITPTPLDSWASKAWWVACLLAFLVKMPLYGAHLW 216
Cdd:TIGR01972 149 WGGP-NRIYAAMKFFLYTLAGSLLMLLAILGLYFLGG-GTF-DLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 217 LPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI-LVILEPLTKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHM 295
Cdd:TIGR01972 226 LPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHM 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 296 GLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPN 375
Cdd:TIGR01972 306 GFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSG 385
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1199278046 376 LMGELMIISSLFNWSVWTIALTGLGTLITAGYSLYMFLMTQRGPLPNH 423
Cdd:TIGR01972 386 FVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNP 433
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
56-425 |
2.07e-74 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 241.51 E-value: 2.07e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 56 YMATDPLSTPLLVLTCWLLPLMIIASQNHVATepvnRQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIIT 135
Cdd:MTH00204 78 VFAVDGVSLFFILLTTLLIPICILISWKSIKF----LFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIG 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 136 RWGNQMERLNAGTYFLFYTLAGSLPLLVALLVFQTSAGTLSFLTISSITptpLDSWASKAWWVACLLAFLVKMPLYGAHL 215
Cdd:MTH00204 154 IWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIK---LPLSIQKWLLVGFFLSLAVKIPQIPFHI 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 216 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVILEPLTKELSYPFII-LALWGIVMTGSICLRQTDLKSLIAYSSVSH 294
Cdd:MTH00204 231 WLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVmLSVIAVIYGSLTTCRQVDFKRLIAYSSVAH 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 295 MGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLP 374
Cdd:MTH00204 311 MGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSC 390
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1199278046 375 NLMGELMIISSLFNWSVWTIALTGLGTLITAGYSLYMFLMTQRGPLPNHLL 425
Cdd:MTH00204 391 NFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLL 441
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-401 |
4.04e-71 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 226.81 E-value: 4.04e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 113 ATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVFQTSAGTLSFLTISSITPTPLDSWA 192
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 193 SKAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVILEPLTKELSYPFIILALWGIVM 272
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 273 TGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLA-NTNYERTHSRTMLLARGLQM 351
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1199278046 352 ALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVWTIALTGLGT 401
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
9-412 |
9.61e-70 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 229.17 E-value: 9.61e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 9 IFLLLSTWLTPSKHLWSTSLLHSLVIATASLSWLISSTETGS---------------SFLGTYMATDPLSTPLLVLTCWL 73
Cdd:MTH00217 13 ILHLLIIPRDNIVRLKKIALEWSLLTLTATILLWASFDGEGQfqaikkfewipgiepVFGPVVFAVDGISIFFLILTALL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 74 LPLMIIASQNHVATepvnRQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFY 153
Cdd:MTH00217 93 TPICILISWNSIKF----LIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFY 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 154 TLAGSLPLLVALLVFQTSAGTLSFLTISSITptpLDSWASKAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLA 233
Cdd:MTH00217 169 TFIGSVFMLLGIFTLYSYAGTTDYQALCCLK---IEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILA 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 234 AVLLKLGGYGMMRILVILEPLTKELSYPFI-ILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTG 312
Cdd:MTH00217 246 GVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVA 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 313 ALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVW 392
Cdd:MTH00217 326 AIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYI 405
|
410 420
....*....|....*....|
gi 1199278046 393 TIALTGLGTLITAGYSLYMF 412
Cdd:MTH00217 406 VGVLASLGMVLSAGYSIYLY 425
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
58-410 |
1.61e-64 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 216.33 E-value: 1.61e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 58 ATDPLSTPLLVLTCWLLPLMIIASQNHVATepvnRQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITRW 137
Cdd:MTH00226 99 AVDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIW 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 138 GNQMERLNAGTYFLFYTLAGSLPLLVALLVFQTSAGTLSFLTISSITPTPLDSwASKAWWVACLLAFLVKMPLYGAHLWL 217
Cdd:MTH00226 175 GSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSEQ-TQKWIFLGIFLAMAVKIPIFPFHIWL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 218 PKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVILEPLTKELSYPFII-LALWGIVMTGSICLRQTDLKSLIAYSSVSHMG 296
Cdd:MTH00226 254 PKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIaMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 297 LVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNL 376
Cdd:MTH00226 334 LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
330 340 350
....*....|....*....|....*....|....
gi 1199278046 377 MGELMIISSLFNWSVWTIALTGLGTLITAGYSLY 410
Cdd:MTH00226 414 IGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
57-411 |
2.03e-55 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 192.17 E-value: 2.03e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 57 MATDPLSTPLLVLTCWLLPLMIIASQNhVATEPvnrqRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITR 136
Cdd:PRK12561 55 LGVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 137 WGNQmERLNAGTYFLFYTLAGSLPLLVALLVFQTSAGTLSF----LTISSItPTPLDSWAskawWVACLLAFLVKMPLYG 212
Cdd:PRK12561 130 WGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFdlaeLGAKSY-PLALELLL----YAGFLIAFGVKLPIFP 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 213 AHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVILEPLTKELSYP-FIILALWGIVMTGSICLRQTDLKSLIAYSS 291
Cdd:PRK12561 204 LHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPaLAILGVVNIIYGALNAFAQDNVKRRLAYSS 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 292 VSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALP 371
Cdd:PRK12561 284 VSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALP 363
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1199278046 372 PLPNLMGELMII---------SSLFNwsVWTIALTGLGTLITAGYSLYM 411
Cdd:PRK12561 364 GMSGFVSELTVFlgitssdvySSTFR--TITILLAAVGLILTPIYLLSM 410
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
32-416 |
1.28e-50 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 177.26 E-value: 1.28e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 32 LVIATASLSWLISSTETGSSFLGTYMAT-------DPLSTPLLVLTCWLLPLMIIASQNHVATEPvnRQRLYISLLISLQ 104
Cdd:COG0651 40 LLALALALLLQVLAGGPLVYALGGWPAPfgivlvaDRLSALFLLLTALVALAVLLYSIGYMRHER--RGRRFYPLFLLLL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 105 MLLILAFSATEMIMFYVMFEATLIPTLIIITRWGNQmERLNAGTYFLFYTLAGSLPLLVALLVFQTSAGTLSFLTISSIT 184
Cdd:COG0651 118 AGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARL 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 185 PTpLDSWASKAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVIL--EPLTKELSYPF 262
Cdd:COG0651 197 AE-LDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLL 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 263 IILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRT 342
Cdd:COG0651 276 LVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRD 355
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1199278046 343 MLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFN-WSVWTIALTGLGTLITAGYSLYMFLMTQ 416
Cdd:COG0651 356 LDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEaGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
95-410 |
8.55e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 169.32 E-value: 8.55e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 95 LYISLLIslqMLLILAFSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVfqtsagt 174
Cdd:MTH00094 66 ILSNLLI---LICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK------- 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 175 lSFLTISSITPTPLDSWASKawwVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVILEPL 254
Cdd:MTH00094 136 -NFFFFSLCYFDFFLSWEMF---FILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 255 tkeLSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTN 334
Cdd:MTH00094 212 ---YNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEF 288
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1199278046 335 YERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVWTIALTGLGTLITAGYSLY 410
Cdd:MTH00094 289 YHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLF 364
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-411 |
8.13e-45 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 163.72 E-value: 8.13e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 59 TDPLSTPLLVLTCWLLPLMIIASQnhvatePVN-RQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITRW 137
Cdd:PRK02546 85 ADGLSMPLILLTGFITTLAVLAAW------PVTfKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIW 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 138 GNQmERLNAGTYFLFYTLAGSLPLLVALLVFQTSAGTLSFlTISSITPTPLDSWASKAWWVACLLAFLVKMPLYGAHLWL 217
Cdd:PRK02546 159 GGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTF-DMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 218 PKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVILEPLTKELSYP-FIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMG 296
Cdd:PRK02546 237 PDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMG 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 297 LVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNL 376
Cdd:PRK02546 317 FVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGF 396
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1199278046 377 MGELMIISSLFNWSVWT-------IALTGLGTLITAGYSLYM 411
Cdd:PRK02546 397 VAELMVFVGFATSDAYTlpfrvvvVFLAAVGVILTPIYLLSM 438
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
60-411 |
9.46e-43 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 157.80 E-value: 9.46e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 60 DPLSTPLLVLTCWLLPLMIIASQnhvatePVNRQ-RLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITRWG 138
Cdd:CHL00011 83 DGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 139 NQmERLNAGTYFLFYTLAGSLPLLVALL---VFQTSAGTLSFLTISSIT-PTPLDswasKAWWVACLLAFLVKMPLYGAH 214
Cdd:CHL00011 157 GK-KRLYSATKFILYTAGGSIFLLIGVLgmgLYGSNEPTLNFETLANQSyPVALE----ILFYIGFLIAYAVKLPIIPLH 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 215 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVILEPLTKELSYPF-IILALWGIVMTGSICLRQTDLKSLIAYSSVS 293
Cdd:CHL00011 232 TWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWlVIVGAIQIIYAASTSLGQRNLKKRIAYSSVS 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 294 HMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERThsRTMLLAR--GLQMALPLMAAWWFISSLANLALP 371
Cdd:CHL00011 312 HMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMASLALP 389
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1199278046 372 PLPNLMGELM----IISS---LFNWSVWTIALTGLGTLITAGYSLYM 411
Cdd:CHL00011 390 GMSGFVAELIvffgIITSqkyLLMPKILITFVMAIGMILTPIYLLSM 436
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
60-429 |
1.41e-38 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 146.38 E-value: 1.41e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 60 DPLSTPLLVLTCWLLPLMIIASQnhvatEPVNRQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITRWGN 139
Cdd:PRK06473 78 DGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 140 QmERLNAGTYFLFYTLAGSLPLLVALL--VFQTSAGTLSFLTISSITptpLDSWASKAWWVACLLAFLVKMPLYGAHLWL 217
Cdd:PRK06473 153 Q-RRGYAATKFLLYTAISGILILVSFLglVWLSGASSFDYEPLRSHT---LPLSTQLLLLAPILVGFGIKIPLVPFHTWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 218 PKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVILEPLTKELSYPFiiLALWGIV--MTGSIC-LRQTDLKSLIAYSSVSH 294
Cdd:PRK06473 229 PDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPW--LATWAVVsvLYGASCaIAQKDMKKMVAYSSIGH 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 295 MGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGL---QMALPLMAAWWFISSLANLALP 371
Cdd:PRK06473 307 MGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIP 386
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1199278046 372 PLPNLMGELMIISSLFNWSVWTIALTGLGTLITAGYSLYMFLMTQRGPLPNHLLSLDP 429
Cdd:PRK06473 387 GMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPR 444
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
57-424 |
6.15e-30 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 121.74 E-value: 6.15e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 57 MATDPLSTPLLVLTCWLLPLMIIASqnhvaTEPVNRQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITR 136
Cdd:PRK07363 75 LGVDGLSLPLLVLNSLLTWIAIYSI-----GENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAI 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 137 WGNQmERLNAGTYFLFYTLAGSLPLLVALLVFQTSAGTLSFlTISSITPTPLDSWASKAWWVACLLAFLVKMPLYGAHLW 216
Cdd:PRK07363 150 WGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSF-DYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 217 LPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVILEPLTKELSYPfiILALWGI--VMTGS-ICLRQTDLKSLIAYSSVS 293
Cdd:PRK07363 228 LPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTisVIYGAlSAIAQKDIKRMVAYSSIG 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 294 HMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQ---MALPLMAAWWFISSLANLAL 370
Cdd:PRK07363 306 HMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMnpiRGLPLTSALLVLAGMASAGI 385
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1199278046 371 PPLPNLMGELMIISSLFNWSVWTIALTGLGTLITAGYSLYMFLMTQRGPLPNHL 424
Cdd:PRK07363 386 PGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKL 439
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-110 |
1.96e-27 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 105.68 E-value: 1.96e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 1 MLKILTPTIFLLLSTWLTPSKHLWSTSLLHSLVIATASLSWLISSTETGSSFLGTYMATDPLSTPLLVLTCWLLPLMIIA 80
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 1199278046 81 SQNHVATEPVNRQRLYISLLISLQMLLILA 110
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-407 |
6.46e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 113.05 E-value: 6.46e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 58 ATDPLSTPLLVLTCwllpLMIIASQNHVATEPVNRQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITRW 137
Cdd:PRK08375 74 RADSLSALFLLVTS----ILAIAALLYAIGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 138 GNQmERLNAGTYFLFYTLAGSLPLLVALLVFQTSAGTLSFLTISSITPtpldswASKAWWVA---CLLAFLVKMPLYGAH 214
Cdd:PRK08375 150 GDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAfgfVLLALALKAAVFPLH 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 215 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILV----ILEPLTKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYS 290
Cdd:PRK08375 223 TWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFtvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 291 SVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLAL 370
Cdd:PRK08375 303 TVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGV 382
|
330 340 350
....*....|....*....|....*....|....*...
gi 1199278046 371 PPLPNLMGELMIISSLFN-WSVWTIALTGLGTLITAGY 407
Cdd:PRK08375 383 PPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
60-399 |
1.71e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 111.99 E-value: 1.71e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 60 DPLSTPLLVLTCWLLPLMIIASQNHVATEPVNRqrLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITRWGN 139
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPE--WYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 140 QMERLNAGTYFLFYTLAGSLPLLVALLVFQTSAGTLSFLTIS----------SITPTPLDSWASKAWWVACLLAFLVKMP 209
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSakirglsfplTGGLAGNPPLALGVALALALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 210 LYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIL-------VILEPLTKELSYPFIILALWGIVMTGSICLRQTD 282
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 283 LKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFI 362
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350
....*....|....*....|....*....|....*..
gi 1199278046 363 SSLANLALPPLPNLMGELMIISSLFNWSVWTIALTGL 399
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLL 435
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
31-396 |
1.66e-24 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 105.78 E-value: 1.66e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 31 SLVIATASLSWLISSTETGSSF-LGTYMATDPLSTPLLVLTCWLLPLMIIASQNHVATEPVN------RQRLYISLLISL 103
Cdd:PRK06458 38 ITLTLILALWLVFTVPDAGEIFaAGLWFFIDDLNVFFLALIGVVGFLTSLYSIGYMRHEVEHgelspvTLRLYYGMYQLF 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 104 QMLLILAFSATEMIMFYVMFEATLIPT--LIIITRWGNQMERlnAGTYFLFYTLAGSLPLLVALLVFqTSAGTLSFLTIS 181
Cdd:PRK06458 118 LFTMLLALTSNNLGLMWVAIEATTLSSalLVGIYRTRASLEA--AWKYIIICSVGVAFALFGTILVY-ANAATVMGDGEM 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 182 SITPTPLDSWAS-------KAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVILE-- 252
Cdd:PRK06458 195 AILWTELLKHASlldptlmKLAFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaa 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 253 PLTKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLAN 332
Cdd:PRK06458 275 IGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASG 354
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1199278046 333 TNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVWTIAL 396
Cdd:PRK06458 355 NVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAI 418
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-404 |
1.39e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 93.86 E-value: 1.39e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 91 NRQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITrWGNQMERLNAGTYFLFYTLAGSLPLLV-ALLVFQ 169
Cdd:PRK07234 91 AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIgAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 170 TSaGTLSFLTISSITPTPLdswaskawwVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILV 249
Cdd:PRK07234 170 AN-GTFAFSGLATADPEAF---------ALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCAL 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 250 ILEPLTKELSYPFIILALWGIVmtgsICLRQTDLKSLIAYSSVSHMGLVAAGILIqtpwgftgALILMIAHGLTSSALFC 329
Cdd:PRK07234 240 DVPGLDLIVRIFGVGTALLGVL----FALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFL 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 330 LANTNYERTHS--RTMLLARGLQMALplmaawwfisSLANLALPPLPNLMG---ELMIISSLFNWSVWTIALTGLGTLIT 404
Cdd:PRK07234 308 CAGALPSRNFTelISQMLGIGKWIPL----------TMASFSIAGFPLLAGfvsKVLTLKNLLPWQAIALNLAAVGTAAS 377
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
9-413 |
1.94e-18 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 87.48 E-value: 1.94e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 9 IFLLLSTWLTPSKHLWSTSLLHSLVIATASLSWLISSTETGSSFLGTYmATDPLSTPLLVLTCWLLPLMIIASQNHVATE 88
Cdd:COG1007 19 VLLLLDLFLPRRSRRLLAGLALLGLLLALALLLLALGGGTGTAFGGMF-VVDGFALFFKLLILLAALLVLLLSRDYLERR 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 89 PVNRQRLYISLLISL--QMLLIlafSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGT-YFLFYTLAGSLPLL-VA 164
Cdd:COG1007 98 GLLRGEFYALLLFATlgMMLMA---SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGFLLYgIS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 165 LLVFQTsaGTLSFLTISS-ITPTPLDSWASKAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLlKLGGYG 243
Cdd:COG1007 175 LLYGAT--GSLNLAGIAAaLAAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFA 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 244 M-MRILVI-LEPLTKELSYPFIILALwgIVMT-GSIC-LRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIA 319
Cdd:COG1007 252 AlLRLLVEaFPGLAADWQLLLAVLAV--LSMTvGNLAaLAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLA 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 320 HGLTSSALF-CLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVWTIALTG 398
Cdd:COG1007 330 YLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIA 409
|
410 420
....*....|....*....|
gi 1199278046 399 -LGTLITAGYSL----YMFL 413
Cdd:COG1007 410 vLNSVISAYYYLrvvkAMYF 429
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
9-387 |
1.27e-17 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 85.55 E-value: 1.27e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 9 IFLLLSTWLTP----SKHLWSTSLLHSLVIATA------SLSWLISSTETGSSF-----LGTYMATDPLSTPLLVLTCWL 73
Cdd:PRK08667 10 ILLLLAAAVIPlvfrHKRKRVWQSVLWLVIAIAlllfagSLQLFTGNPLDIPLWgiapgLDITFHIDRLAAFFIILIGLV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 74 LPLMIIASQNHVATEPVNRQRLYISLLISLQML-LILAFSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLF 152
Cdd:PRK08667 90 SLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFV 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 153 YTLAGSLPLLVALLVFQTSAGTLSFLTISSitPTPLDSWAskawWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVL 232
Cdd:PRK08667 170 MTQLSTVFLMLGIIVLFIQTGSFELSPLGA--SAGILSLV----FLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALM 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 233 AAVLLKLGGYGMMRILVILepLTKELSYPFIILALWGI-VMTGSI-CLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGF 310
Cdd:PRK08667 244 SGVMLKVAVYGLVRFLMDV--LSPELWWGVLILLAGSIsALLGVIyALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGV 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 311 TG-----------ALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGE 379
Cdd:PRK08667 322 YGldtlallalggALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASE 401
|
....*...
gi 1199278046 380 LMIISSLF 387
Cdd:PRK08667 402 LLLYESFF 409
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
170-414 |
1.50e-17 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 84.81 E-value: 1.50e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 170 TSAGTLSFLTISSITPTpLDSWASKAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILV 249
Cdd:PRK08676 183 LGTGTLNWTELAAHASL-LSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSA 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 250 ILEP--LTKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSAL 327
Cdd:PRK08676 262 LLRQsgAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGL 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 328 FCLANTnYERTHSRTMLLARGLQMALPLMAAWWFI-SSLANLALPPLPNLMGELMIISSLFNWSVWTIALTgLGTLITAG 406
Cdd:PRK08676 342 FFSAGI-LHRQYRSDRFDRIFDVFRLQPVAAWGVIlGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAV-LLLLLLAA 419
|
....*...
gi 1199278046 407 YSLYMFLM 414
Cdd:PRK08676 420 SSFAIFLL 427
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
111-386 |
4.43e-17 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 83.89 E-value: 4.43e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 111 FSATEMIMFYVMFEATLIPTLIIITRwGNQMERLNAGTYFLFYTLaGSLPLLVALLVFQTSAGTLSFLTISSITPTplDS 190
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVLSAI-GAYAMLYAIFLIYAKTGTFDFADISQGLIN--DT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 191 WASKAWWVACLL--AFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVILePLTKELS--------- 259
Cdd:PRK08668 191 STGFALIVFLFLlaFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVL-PGTKLFSefgtyrgvp 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 260 ---YPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYE 336
Cdd:PRK08668 270 lfnYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIY 349
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1199278046 337 RTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSL 386
Cdd:PRK08668 350 RTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL 399
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-410 |
9.91e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 82.32 E-value: 9.91e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 109 LAFSATEMIMFYVMFEATLIPTLIIITRwGNQMERLNAGTYFLFYTLAGSLPLLVALLVFQTSAGTLSFLTISsITPTPL 188
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLA-VRLDEL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 189 DSWASKAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVILEPlTKELSYPFIILALW 268
Cdd:PRK12665 204 PSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLLMVVALL 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 269 GIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARG 348
Cdd:PRK12665 283 TMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGG 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1199278046 349 LQMALPLMAAWWFISSLaNLA-LPPLPNLMGELMIISS-LFNWSVWTIALTGlGTLITAGYSLY 410
Cdd:PRK12665 363 LAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKVALLEAgAEDGTWLAWALVA-GGVVTSLLTLY 424
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
99-409 |
2.81e-16 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 81.63 E-value: 2.81e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 99 LLISLQMLLILAFS-ATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTyfLFYTLAGSLPLLVALLVFQTSAGTLSf 177
Cdd:PRK12650 114 LLMTAFMAAMLLLVlADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQTGTTS- 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 178 ltISSITPTPldSWASKAWW---VACLLAFLV--KMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVILE 252
Cdd:PRK12650 191 --LSGILHSD--VWAEKPGLttvVAVLIAVAAftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFH 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 253 PLTKeLSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLAN 332
Cdd:PRK12650 267 DVAV-WNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIG 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 333 TNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNL-----MGELMIISSLFNWSVWTIALT-GLGTLITAG 406
Cdd:PRK12650 346 VVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFvskegMLTAFLEAPGGNAGVVLLLVGaALGAVFTFA 425
|
...
gi 1199278046 407 YSL 409
Cdd:PRK12650 426 YSA 428
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
96-415 |
3.55e-16 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 80.97 E-value: 3.55e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 96 YISLLISLQMLLILAFSateMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVFQTSAGTL 175
Cdd:COG1009 116 YLLLFMAAMLGLVLSDN---LLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 176 SFLTISSITPTPLDSWASkawWVACLLAFLVKM------PLygaHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRIL 248
Cdd:COG1009 193 NFSELLAAAPTILSSPLL---TLILLLLLLGAFgksaqfPL---HFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLS 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 249 VILEpLTKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQtpwGFTGALILMIAHGLTSSALF 328
Cdd:COG1009 266 PLFA-LSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLF 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 329 CLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVWTIALTGLGTL---ITA 405
Cdd:COG1009 342 LGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTA 421
|
330
....*....|
gi 1199278046 406 GYSLYMFLMT 415
Cdd:COG1009 422 FYSFRLFFLV 431
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
100-387 |
4.22e-16 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 80.70 E-value: 4.22e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 100 LISLQMLLIlafsATEMIMFYVMFEA-TLIPTLIIITrwgNQMERLNAGTYFLFYTLA--GSLPLLVALLVFQTSAGTLS 176
Cdd:PRK06521 123 LASMVLVLL----ADDAFSFLVAWETmSLSSWFLVIA---NHREAEIRRAGFLYLLMAhaGALAILLAFGLLARESGSYD 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 177 FLTISSITPTPLdsWASkawwVACLLAFL---VKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVILEP 253
Cdd:PRK06521 196 FAAMRAAHLSPF--WAS----LVFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLG 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 254 lTKELSYPFIILALWGI--VMTGSICLRQTDLKSLIAYSSVSHMGLV-----------AAGILIQTPWGFTGALILMIAH 320
Cdd:PRK06521 270 -APGWWWGVLVLALGAIsaVLGVLYALAEHDLKRLLAYSTIENIGIIfvglglamvfiAYGMPLLAALALTAALYHLLNH 348
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1199278046 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLF 387
Cdd:PRK06521 349 ALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLL 415
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
76-407 |
3.18e-15 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 77.50 E-value: 3.18e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 76 LMIIASQNHVATEPVNRQRLyisllislqMLLILAFSATEMIM------FYVMFEATLIpTLIIITRWGNQMERLNAGTY 149
Cdd:PRK08377 93 IMSIFSLKAVEVEPIDKYAM---------LFLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMK 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 150 FLFYTLAGSLPLLVALLVFQTSAGTLSFLTISSITPTpLDSWASKAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGS 229
Cdd:PRK08377 163 YIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGT-IDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPIT 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 230 MVLAAVLLKLGGYGMMRILVILEPLTKELSYP--FIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTP 307
Cdd:PRK08377 242 VMFSAFVVKAGLYAMARILYLMQNANGWSSVLklVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQ 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 308 WGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLF 387
Cdd:PRK08377 322 AGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGL 401
|
330 340
....*....|....*....|.
gi 1199278046 388 NWS-VWTIALTGLGTLITAGY 407
Cdd:PRK08377 402 SAGyTWPVALVLGASVVEAVY 422
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
116-402 |
3.21e-15 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 78.04 E-value: 3.21e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 116 MIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVFQTSAGTLSFLTISSITptplDSWASKA 195
Cdd:PRK12647 117 LITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLASG----DVIREHP 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 196 WWVACLLAFLV----KMPLYGAHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRilviLEPLTKELSYPFIILALWG- 269
Cdd:PRK12647 193 LYLAILLLVLGgaftKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGg 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 270 --IVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLAR 347
Cdd:PRK12647 268 ltMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLG 347
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1199278046 348 GLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVWTIALTGLGTL 402
Cdd:PRK12647 348 GLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
120-404 |
3.72e-15 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 77.30 E-value: 3.72e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 120 YVMFEATLIPTLIIITrWGNQMERLNAGTYFLFYTLAGSLPLLVALLVFQTSAGTLSFLTISSITPTPLDSWASKAWWVA 199
Cdd:PRK12663 134 YVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 200 CLLAFLVKMPLYGAHlWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVILEPLTKELSYPFIILALWGIVMTGSI-CL 278
Cdd:PRK12663 213 FLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALgAL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 279 RQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAA 358
Cdd:PRK12663 292 AYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGA 371
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1199278046 359 WWFISSLANLALPPLPNLMGELMII-SSLFNWSVWTIALTGLGTLIT 404
Cdd:PRK12663 372 LFLILIFAIGGLPPFSGFWGKVLLVqGALDNGAYILLALMLITSLIT 418
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
91-402 |
1.16e-13 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 72.70 E-value: 1.16e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 91 NRQRLYISLLISLQMLLILAFSATeMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFyTLAGSLPLLVALLVFQT 170
Cdd:PRK06525 111 GTGRYYAFLLLFIGAMAGLVYSST-LLGLLLFFEITGLCSWALISYYQSPKALRSALKALLI-THIGSLGLYLAAATLFL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 171 SAGTLSFLTISSITPTpldswaSKAW-WVACLLAFLVKMPLYGAHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRIL 248
Cdd:PRK06525 189 QTGTFALSALSGLHGS------LKYLvFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAI 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 249 VILEPLTKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQ---TPWGFTGALILMIAHGLTSS 325
Cdd:PRK06525 262 QSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKS 341
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1199278046 326 ALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVWTIALTGLGTL 402
Cdd:PRK06525 342 LFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
91-431 |
1.82e-13 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 72.87 E-value: 1.82e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 91 NRQRLYISLLISL-QMLLILAfsATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVFQ 169
Cdd:PRK12646 108 NLPRFYFYLTLFMfSMIGIVL--SDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLY 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 170 TSAGTLsflTISSITpTPLDSWASKAWWVACLLAFLV----KMPLYGAHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGM 244
Cdd:PRK12646 186 IMTGTN---NITEIL-GQADHIKNHGLFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLL 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 245 MRILVILEpLTKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAA-----GILIQTPWG---------F 310
Cdd:PRK12646 261 FRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAmvgigGGYAQHQQDaiasiyvfvL 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 311 TGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWS 390
Cdd:PRK12646 340 FAALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTG 419
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1199278046 391 -------VWTIALTGLG---TLITAGYSLYMFLMTQRGPLPNHLLSLDPSH 431
Cdd:PRK12646 420 qlsqfslISMIIIVFIGviaSIFTFTYALYMVKEVFWGKYDSKVFTKKNIH 470
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
90-394 |
2.10e-13 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 71.49 E-value: 2.10e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 90 VNRQRLYISLLISlqmllILAFSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVFQ 169
Cdd:MTH00062 72 VSRFFLFLSLIFS-----ILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 170 TSAGTLSFLTISSitptpLDSWASKAWWVACLLaFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILV 249
Cdd:MTH00062 147 LVNGSFNFSDWGS-----DDSVSLIVYYVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCG 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 250 ILEPLTKELSYPFIILALWGIVMTGSICLrqtDLKSLIAYSSVSHMgLVAAGILIQTPWGFTG-ALILMIAHGLTSSALF 328
Cdd:MTH00062 221 FIFSGSFLGYLFLCCLFSVFFLITACSEL---DGKRWLAFLSLSHI-LVPVLGLFVGDWSSINlSFFYCLGHGLSAGLVF 296
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1199278046 329 CLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVWTI 394
Cdd:MTH00062 297 LLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLL 362
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-398 |
3.01e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 71.67 E-value: 3.01e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 96 YISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFY-TLAGSLPLL-VALLVFQTSAG 173
Cdd:PRK08376 123 YYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVgSLASSMVLLgIALLYGQYGTL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 174 TLSFLTIS-SITPTPLDswasKAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLaaVLLKLGG-YGMMRILVIL 251
Cdd:PRK08376 203 NMAYLAVKmSENPTVVA----KIALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSI 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 252 EPLT---KELSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMG---------LVAAGILIQTPWGFT---GALIL 316
Cdd:PRK08376 277 YGPAinlATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEIalaGGIYH 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 317 MIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISS--LFNWSVWTI 394
Cdd:PRK08376 357 IVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESsaLFNPILGVI 436
|
....
gi 1199278046 395 ALTG 398
Cdd:PRK08376 437 AMIG 440
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
113-410 |
6.18e-13 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 71.11 E-value: 6.18e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 113 ATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVFQTSAGTLSfltISSITPTPLDSWA 192
Cdd:PRK12644 125 SDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYR---LSELLADPPTGPA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 193 SKAWWVACLLAFLVKMPLYGAHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRilviLEPLTKELS---YPFIILALW 268
Cdd:PRK12644 202 VSVAVVLILVGALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVAR----LAPGFADVPvwrPTVLVLGLA 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 269 GIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARG 348
Cdd:PRK12644 277 TMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSG 356
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1199278046 349 LQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFN------WSVWTIALTGLGTLITAGYSLY 410
Cdd:PRK12644 357 LGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHdgalgpAGPVVLAGIVLGSILTVAYSLR 424
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
149-418 |
3.84e-12 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 68.38 E-value: 3.84e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 149 YFLFYTLAGSLpLLVALLVFQTSAGTLSFLTISSITPTpldswaskAWWVAcLLAFLVKMPLYGAHLWLPKAHVEAPIAG 228
Cdd:PRK12668 148 YLLVHVLGGVL-LLAGILLHYAETGSFAFGAIAGLGGT--------AAWLI-LIGFGVNAAFPPLHAWLPDAYPEATVTG 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 229 SMVLAAVLLKLGGYGMMRILvilePLTKELSYPFIILALWGIVMTgsicLRQTDLKSLIAYSSVSHMGLVAAGILIQTPW 308
Cdd:PRK12668 218 SVFLSAFTTKTAVYALARAF----PGTELLIYIGAAMAVYGVFFA----LLENDLRRLLSYHIVSQVGYMVAGIGIGTAL 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 309 GFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSL-- 386
Cdd:PRK12668 290 AINGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMIISAAge 369
|
250 260 270
....*....|....*....|....*....|....*.
gi 1199278046 387 --FNWSVWTIALTGLGTLITAGYSL--YMFLMTQRG 418
Cdd:PRK12668 370 dhYVWVWLLLLLASAGTFLHFGIKLpyFAFFGGDSG 405
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-413 |
5.89e-12 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 67.54 E-value: 5.89e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 1 MLKILTPTIFLLLSTWLTPSKHLWSTSLLHSLVIATASLSWLISSTETGSSFLGTYMATDP---LSTPLLVLTCWLLPLM 77
Cdd:PRK05777 14 ELILLGAAVVLLLIDAFVRRHSRRATLAVLALLLALVALLFVLGAAGGGTAFGGMLVVDGFalfLKGLILLASLLALLLA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 78 IIASQNHVATEpvnrqrLYISLLISL--QMLLIlafSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAG-TYFLFYT 154
Cdd:PRK05777 94 RPYLEDRGRGE------FYLLVLFALlgMMVMV---SANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAiKYFVLGA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 155 LAGSLPLLVALLVFqTSAGTLSFLTIS-SITPTPLDSWASKAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLA 233
Cdd:PRK05777 165 LASGFLLYGMSLLY-GATGSLSFAGIAkALADGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 234 AVLlKLGGYGM-MRILV-ILEPLTKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFT 311
Cdd:PRK05777 244 TAP-KIAAFAVlLRLLVvAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 312 GALILMIAHGLTSSALF----CLANTNYERTHSRTMllaRGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLF 387
Cdd:PRK05777 323 AVLFYLLAYLFMTLGAFgvisLLRRKGGEAESISDF---AGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAV 399
|
410 420 430
....*....|....*....|....*....|.
gi 1199278046 388 NWSVWTIALTG-LGTLITAGYSL----YMFL 413
Cdd:PRK05777 400 EAGLWWLAVIGvLNSAIGAFYYLrvikLMYF 430
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-414 |
1.17e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 66.38 E-value: 1.17e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 96 YISLLISLQMLLILAfsaTEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVFQTSAGTL 175
Cdd:PRK06589 121 FFNLTILIGVLIALS---SDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNL 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 176 SFLTISSItptpldswaSKAWWVACLLAF---LVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILV--- 249
Cdd:PRK06589 198 DFVSGGLF---------SKNQSIILLLMFiygIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLyif 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 250 ---ILEPLTKELSYpFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSA 326
Cdd:PRK06589 269 glsYLQRIFAEFNW-LIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKIC 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 327 LFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFN----WSVWTIALTGLGTL 402
Cdd:PRK06589 348 LFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEqnqpWLSIIVMLVVIASS 427
|
330
....*....|..
gi 1199278046 403 ITAgySLYMFLM 414
Cdd:PRK06589 428 ILS--ALYLLKI 437
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
110-402 |
1.52e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 66.13 E-value: 1.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 110 AFSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLpLLVALLVFQTSAGTLSFLTISsITPTPLD 189
Cdd:PRK07691 124 AFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLINVVSSAF-FVVAVAILYSVVGTLNMADIS-VKIAELS 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 190 SWASKAWWVACLLAFLV---KMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVILEPLTKELSYPFI-IL 265
Cdd:PRK07691 202 AGQTGLITVVAILFLFVfatKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLIlIL 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 266 ALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLL 345
Cdd:PRK07691 282 ALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKK 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1199278046 346 ARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFN----WSVWTIALTGLGTL 402
Cdd:PRK07691 362 MGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEagfyVSGIIVLLSSLLVL 422
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-393 |
1.84e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 62.83 E-value: 1.84e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 201 LLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI--------LVILEPLtkeLSYPFIILALWGIVM 272
Cdd:PRK12662 216 MVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkanFVFTTLP---FNNVFMILAALAIVF 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 273 TGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANT---NYERTHSRTMLlarGL 349
Cdd:PRK12662 293 GSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL---NL 369
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1199278046 350 QMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVWT 393
Cdd:PRK12662 370 WKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWI 413
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
2-409 |
3.94e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 61.50 E-value: 3.94e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 2 LKILTPTIFLLLSTWL---------TPSKHLWSTSLLHSLVIATASLSWLISSTETGSSFLGTYMAT-DPLST--PLLVL 69
Cdd:TIGR01770 1 LIAILPEIILLLGAFIlllyglfysRKKRNPLLLKNLSYIVLLSALVSLFLTLQYAAYLFTGFSFFIvDNFALliKLILL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 70 TCWLLPLMIIASQNHVatEPVNRQRLYISLLISLQMLLILAfSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAG-T 148
Cdd:TIGR01770 81 LSTLLTFFFALSYLSK--EKINKFEFYILLLFALLGIFLLV-SSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGlK 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 149 YFLFYTLAGSLPLLVALLVFqTSAGTLSFLTISSI-TPTPLDSWASKAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIA 227
Cdd:TIGR01770 158 YFILGAFSSGLLLFGISLIY-GFTGSLNFEDLLLFlSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 228 GSMVLAAVLLKLGGYGMMRILV-ILEPLTKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQT 306
Cdd:TIGR01770 237 VTAFFSIVPKIAIFAVFLRLFLyILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGT 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 307 PWGFTGALILMIAHGLTSSALF-CLANT-NYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIIS 384
Cdd:TIGR01770 317 LEGIKAVLFYIFIYALMSLGAFgVLSLLrSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFF 396
|
410 420
....*....|....*....|....*.
gi 1199278046 385 SLFNWSVWTIALTG-LGTLITAGYSL 409
Cdd:TIGR01770 397 ALLKSGLYWLAVIAvLTSVIGAFYYL 422
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
157-388 |
1.16e-09 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 60.61 E-value: 1.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 157 GSLPLLVALLVFQTSAGTLSFLTISSITPT-PLDSwaskAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAV 235
Cdd:PRK08042 146 GTLLLAIACWLLWQRYGTLDLRLLDMRMQQlPLGS----DIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 236 LLKLGGYGMMRILVILEPLTKELSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLV-------AAGILIQTP- 307
Cdd:PRK08042 222 VMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgagVTGIALEQPa 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 308 ---WGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIIS 384
Cdd:PRK08042 302 liaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQ 381
|
....
gi 1199278046 385 SLFN 388
Cdd:PRK08042 382 SFFK 385
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
143-403 |
6.75e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 57.94 E-value: 6.75e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 143 RLNAGTYFLFYTLAGSLPLLVALLVFQTSAGTLSFLTISSITPT--PLDSWASKAWWVACLLAFLVKMPLYGAHLWLPKA 220
Cdd:PRK12666 157 RVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQlpAADRALLEAGAALLLVVFLIKAAMWPLNFWLPPA 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 221 HVEA--PIAGsmvLAAVLLKLGGYGMMRILVILEPLTKELSYPFIILALWGIVM----TGSI-CLRQTDLKSLIAYSSVS 293
Cdd:PRK12666 237 YAAAsaPVAA---LFAIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGGLatlaFGAIgVLAAQRLRRLAAYLVLV 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 294 HMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLAN-----------------TNYERTHSRTMLLARGLQMALPLM 356
Cdd:PRK12666 314 SSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADlverqrgaaadrlavtpELYDLDEEEEEEVGVAIPATMALL 393
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1199278046 357 AAWWFISSLANLALPPLPNLMGELMIISSLFN-------WSVWTIAL-TGLGTLI 403
Cdd:PRK12666 394 GLLFFICALALAGLPPLSGFLGKFALLQALLNppgagaaWWLWALVLlSGLAALI 448
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
94-409 |
1.33e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 57.15 E-value: 1.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 94 RLYISLLISLQMLLILAFSATEMIMFyVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVFQTSAG 173
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 174 TLSFLTISSiTPTPLDSWASKAWWVACLLAFLVKMPLYGA----HLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRIl 248
Cdd:PRK12649 191 TYDIATILQ-DSELIENIKGHPLFLITLILIFIGAAAKSAqgpfYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARI- 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 249 vilEPLTKELSYPFIILALWGI---VMTGSICLRQTDLKSLIAYSSVSH----MGLVAAGILIQTPWGFTGALILMIAHG 321
Cdd:PRK12649 268 ---HPIFSGTEAWFILVSGTGMitmVLAGFLAFRQTDIKAILAYSTISQlaylMTMYGYTTYHEPGLGVAAATFHLLNHA 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 322 LTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSL--------FNWSVWT 393
Cdd:PRK12649 345 TFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYETSvemgaligGPFTIII 424
|
330
....*....|....*.
gi 1199278046 394 IALTGLGTLITAGYSL 409
Cdd:PRK12649 425 PAVAVLGGVFTFAYSI 440
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
60-383 |
1.55e-08 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 56.89 E-value: 1.55e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 60 DPLSTPLLVLTCWLLPLMIIASQNHVATEP-VNRQRLYISLLISLQMLLIlafSATEMIMFYVMFEATLIPTLIIITRWG 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYLSLFTFLMMVLV---TSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 139 NQMERLNAGTYFLFYTLAGSLPLLVALLVFQTSAGTLSFLTIS--SITPTPLDSWASK--------AWWVACLLAFLV-- 206
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggSVGSGIMDRGYYGggayesplAPFAIIGILLLIgc 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 207 --KMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILvilePLTKELSYPFIILALWGIV---MTGSICLRQT 281
Cdd:MTH00032 236 igKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQN 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 282 DLKSLIAYSSVSHMGLVAAGILIQTPWGFtgALILMIAHGLTSSALFCLA-----NTNYERTHSRTMllaRGLQMALPLM 356
Cdd:MTH00032 312 DLKKVIAYSTCSQLGYMVLIIGIEGSHNV--GLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSIPFT 386
|
330 340
....*....|....*....|....*..
gi 1199278046 357 AAWWFISSLANLALPPLPNLMGELMII 383
Cdd:MTH00032 387 YTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
263-385 |
1.48e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 53.50 E-value: 1.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 263 IILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRT 342
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1199278046 343 MLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISS 385
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQA 392
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
100-406 |
1.62e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 53.11 E-value: 1.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 100 LISLQMLLILafSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAG-TYFLFYTLAGSLPLLVALLVFQTSAGT-LSF 177
Cdd:MTH00196 1 MVALGILCLI--SSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGlKYFVLGALSSGLFLFGCALLCGTTGGLhLSY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 178 LTISSITPTPLDSWASKAWWVACLLAFLVKMPLYGAHLWLPKAHVEAPIAgSMVLAAVLLKLGgygmmrILVILEPLTKE 257
Cdd:MTH00196 79 INLVLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTK-TTALLAIVPKLG------IFSILVSIGLN 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 258 LSYpFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLA---NTN 334
Cdd:MTH00196 152 VNI-LLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIIlalNVY 230
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1199278046 335 yerthsRTMLLA-RGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVWTIALTGLGTLITAG 406
Cdd:MTH00196 231 ------KNLIIEfSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAG 297
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
197-418 |
3.16e-06 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 49.64 E-value: 3.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 197 WVACLLAFLVKM---------PLygaHLWLPKAhVEAPI-------AGSMVLAAVLLklggygmmriLVILEPLTKELSY 260
Cdd:PRK07376 224 WLALLLCILVFLgpmaksaqfPL---HVWLPDA-MEGPTpisalihAATMVAAGVFL----------VARMYPVFEQFPA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 261 PFIILALWGIV---MTGSICLRQTDLKSLIAYSSVSHMG--LVAAGIliqtpWGFTGALILMIAHGLTSSALFCLANT-- 333
Cdd:PRK07376 290 VMTVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGymVMAMGC-----GAYSAGLFHLMTHAYFKAMLFLGSGSvi 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 334 -------NYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVwtiALTGLGTL---I 403
Cdd:PRK07376 365 hgmeevvGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANP---ALWFVGFLtagM 441
|
250
....*....|....*
gi 1199278046 404 TAGYSLYMFLMTQRG 418
Cdd:PRK07376 442 TAFYMFRMYFLTFEG 456
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
31-415 |
3.89e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 46.22 E-value: 3.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 31 SLVIATASLSWLI------SSTET--------GSSFLGTY--MATDPLSTPLLVLTCWLLPLMIIASQNHVATEP-VNRQ 93
Cdd:MTH00020 34 SCLIISLSWSFLIfyeilfNSSTTyiklwrwlDSDLLTVYfgLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPhIPRF 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 94 RLYISLLISLQMLLIlafSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVFQTSAG 173
Cdd:MTH00020 114 MSYLSLFTFLMVVLV---TSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFG 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 174 TLSFLTISSITPtpldSWASKAWWVACLLAFLV---KMPLYGAHLWLPKAH-----VEAPI-AGSMVLAAVLLklggygm 244
Cdd:MTH00020 191 SLDFSSVFNMVV----SAPSSDITLICLFLFIGavgKSAQLGLHTWLPDAMegptpVSALIhAATMVTAGVFL------- 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 245 mriLVILEPLTKELSYPFIILALWG---IVMTGSICLRQTDLKSLIAYSSVSHMG--LVAAGIliqtpWGFTGALILMIA 319
Cdd:MTH00020 260 ---LIRSSPLFEQAPLALIIVTIVGsltVFFAATVGLVQNDLKKVIAYSTCSQLGymVVACGL-----SHYSISLFHLMN 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 320 HGLTSSALFCLANTN-YERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVWTIA--L 396
Cdd:MTH00020 332 HAFFKALLFLSAGSViHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAywL 411
|
410
....*....|....*....
gi 1199278046 397 TGLGTLITAGYSLYMFLMT 415
Cdd:MTH00020 412 GCFSALLTAFYSIRLIYLT 430
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
116-424 |
7.99e-05 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 45.30 E-value: 7.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 116 MIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVFQTSAGTLS----FLTISSITPTPLDSW 191
Cdd:PRK12645 132 LIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSiremIANADEIQNSPLFIP 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 192 ASkawwVACLLAFLVKMPLYGAHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRilviLEPLTKELSYPFIILALWGI 270
Cdd:PRK12645 212 AM----ILILLGAFTKSAQFPFYIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVAR----FTPIFAGSQVWFWTVTLVGL 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 271 VMT--GSI-CLRQTDLKSLIAYSSVSHMGLV-------AAGILIQTPWG------FTGALILMIAHGLTSSALFCLANTN 334
Cdd:PRK12645 283 ITLfwGSLnAVKQTDLKGILAFSTVSQLGLImsllgigAASLHYQGDDSkiyaaaITAAIFHLINHATFKGSLFMIVGIV 362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 335 YERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISS--------LFNWSVWTI---ALTGLGTLI 403
Cdd:PRK12645 363 DHETGTRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESmlnateanLFSLDTWGVlfpVIAWVASVF 442
|
330 340
....*....|....*....|..
gi 1199278046 404 TAGYSLYMFLMTQRGPL-PNHL 424
Cdd:PRK12645 443 TFVYSIIFIFKTFFGKYkPEQL 464
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
96-404 |
1.42e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 44.40 E-value: 1.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 96 YISLLISLQML-LILAFSATEMIMFYVMFEATLIPTLIIITRWGNQMErlnAGTYFLFYTLAGSLPLLVALLVFQTSAGT 174
Cdd:PRK06459 73 WLSSLYILTILgMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKR---PAFVFMAFGELSTVLILAGFAWAFIISGT 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 175 LSFLTISSITPTPLDSwaskawwvaclLAFLVKMPLYGAHL--WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVILE 252
Cdd:PRK06459 150 TNFSYLPSPVPLILAS-----------FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQ 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 253 PLTKE-LSYPFIILALWGIVMTGSICLRQTDLKSLIAYSSVSHMG--LVAAGILIQTPWGFT--------GALILMIAHG 321
Cdd:PRK06459 219 TIPIGyFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGaiLVALGLYMVTKQLITsiehfsliTVILYSFAHS 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 322 LTSSALFCLANTnyerTHSRTMLLARGLQMALPLMAAWWFISSLAnlALPPLPNLMGELMIISSLFNWSVWTIALTGLGT 401
Cdd:PRK06459 299 VAKTGLFLSSGL----QEKQSITYSKKIRNRWIELGLTLLASSLS--GLLPNIGGVASWLLLESLFMFAYVLHNVISILF 372
|
...
gi 1199278046 402 LIT 404
Cdd:PRK06459 373 IVT 375
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
102-428 |
5.37e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 42.07 E-value: 5.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 102 SLQMLLILAFSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLPLLVALLVFQTSAgtlsflTIS 181
Cdd:MTH00011 14 TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFPS------LLK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 182 SITPTPLdswaskawwvacLLAFLVKMPLYGAHLWLPkaHVEAPIAGSMVLAavllkLGGYGMMRILVILEPLTKELSYP 261
Cdd:MTH00011 88 NITALML------------LVSLMLKLGMAPCHFWFP--SVMSSISWTLCLI-----LSTWQKIAPLSILFFFTSHNILP 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 262 FII-LALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAagiLIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHS 340
Cdd:MTH00011 149 MMTsMAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMT---MISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKF 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 341 RTMLLARGlqmalPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWSVWTIALTgLGTLITAGYSLYMFLMTQRGPL 420
Cdd:MTH00011 226 NSKISSMS-----QTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLV-LIVGSLMNLFYYLNLIFNFMYL 299
|
....*...
gi 1199278046 421 PNHLLSLD 428
Cdd:MTH00011 300 SPTFSSLK 307
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
81-415 |
7.62e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 41.86 E-value: 7.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 81 SQNHVATEPvnRQRLYISLLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00211 99 SLWYMSSEP--NINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIG 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 161 LLVALLVFqtsAGTLSFLTISSITPTPLDSWAskaWWVACLLAFLVKMPLYGAHLWLPKAhVEAPIAGS-------MVLA 233
Cdd:MTH00211 177 LLLSMVWL---LLNLNSWEISQLFILNLDLTL---FLLGLLLAAMGKSAQFGFHPWLPSA-MEGPTPVSallhsstMVVA 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 234 AVLLklggygMMRilviLEPLTKELSYPFIILALWGIVMT--GSIC-LRQTDLKSLIAYSSVSHMGLVAAGILIQTPW-- 308
Cdd:MTH00211 250 GVFL------LIR----LSPLFQNNQLILGAVLLLGALTMlfGALCaLTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQla 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 309 -------GFTGALILM----IAHGLTSSALFclantnyerthsRTMllaRGLQMALPLMAAWWFISSLANLALPPLPNLM 377
Cdd:MTH00211 320 flhicthAFFKAMLFMcsgsIIHGLNNEQDI------------RKM---GGLSKNLPFTSSCLFLGSLALMGFPFLSGFF 384
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1199278046 378 GELMIISSLF--NWSVWTIALTGLGTLITAGYSLYMFLMT 415
Cdd:MTH00211 385 SKDLILESMNgsYLNAWALLLTLLATSLTAAYSFRLIFLS 424
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
201-414 |
1.11e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 41.02 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 201 LLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGMMRILVilepLTKELSYPFIILALWGIVMTGSICLRQ 280
Cdd:MTH00144 91 LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLLSNFL----DLYWLAYLLCVISVLSALVGSIGGLNQ 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 281 TDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTssaLFCLANTNYERTHSRTMLLARGLQMALPLMaaww 360
Cdd:MTH00144 166 TQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFL---FFSLWSGDSGSMKDLGSLKPSYKTGLSIIS---- 238
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1199278046 361 FISSLAnlALPPLPNLMGELMIISSLFNWSVW-TIALTGLGTLITAGYSLYMFLM 414
Cdd:MTH00144 239 LLLSLG--GLPPFLGFCSKLLVLISSMESSPLlLILLLLLGSLISLFFYLSVFFS 291
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
157-396 |
1.36e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 41.05 E-value: 1.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 157 GSLPLLVALLVFQTSAGTLSFltissitpTPLDSWASKA----WWVACLLAFLVKMPL-----YGAHLWLPKAhVEAPIA 227
Cdd:PRK07390 183 GDLLLLMGVVALSPLAGTLNF--------SDLAAWAATAnldpLTATLLGLALIAGPTgkcaqFPLHLWLDEA-MEGPNP 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 228 GSMVLAAVLLKLGGYgmmrILVILEPLTkELSyPFIILALWGI-----VMTGSICLRQTDLKSLIAYSSVSHMGLVAAGI 302
Cdd:PRK07390 254 ASILRNSVVVATGAW----VLIKLQPVL-ALS-PVALTVLIVIgtvtaIGASLVAIAQIDIKRALSYSTSAYLGLVFIAV 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 303 LIQTPwgfTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMI 382
Cdd:PRK07390 328 GLQQP---DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRL 404
|
250
....*....|....
gi 1199278046 383 ISSLFNWSVWTIAL 396
Cdd:PRK07390 405 ADGLWAVSPWLVGV 418
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
140-413 |
2.64e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 40.07 E-value: 2.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 140 QMERLNAGTYFLFYTLAGSLPLLVALLVFQTsAGTLSFLTISSITPTPLDSWASKAWWVACLLAFLVKMPLYGAHLWLPK 219
Cdd:PRK08168 147 PFARLAAHKKFIADRLAELLLLAAAALAYLE-VGSLSLSALWAHLAAQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQ 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 220 AhVEAPIAGSMVLAAVLLKLGGYgmmrILVILEPLTKELSYPFIILALWGI---VMTGSICLRQTDLKSLIAYSSVSHMG 296
Cdd:PRK08168 226 V-MEAPTPVSALLHAGVVNLGGF----VLIRFAPLLEQAPPARWLLVLVGLataVLAGLVMLTRISIKVRLAWSTVAQMG 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 297 LvaagILIQTPWG-FTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMAA-------------WWFI 362
Cdd:PRK08168 301 F----MLLECGLGlYELALLHLVAHSLYKAHAFLSASEAVRDTRLRRLQGPQSAAGVVSLLLApllsaalvlllqsLLPL 376
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1199278046 363 SSLANLALPPLPNLMGELMIISSLFNWSVWTIALTGLGTLitAGYSLYMFL 413
Cdd:PRK08168 377 GAWPWWWSAVLALAWAPLLWQPCASGASTLSGLGLGLLLV--AGLTALAFL 425
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
157-415 |
4.36e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 39.61 E-value: 4.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 157 GSLPLLVALLVFQTSAGTLSFLTISSITPTPLDSwasKAWWVACLLAFLV---KMPLYGAHLWLPKAH-----VEAPI-A 227
Cdd:MTH00210 174 GDIGLVLAMIMILKEFGTLEFSTISSLLVTNINK---ESLTIICLLLFIGavgKSAQLGLHTWLPDAMegptpVSALIhA 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 228 GSMVLAAVLLklggygMMRILVILEPLTKELSYPFIILALWGIvMTGSICLRQTDLKSLIAYSSVSHMGL--VAAGILiq 305
Cdd:MTH00210 251 ATMVTAGVFL------IIRSGPLFEGSPLALTIVTILGALTAF-FAATVGVVQNDLKKVIAYSTCSQLGYmvMVCGIS-- 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 306 tpwGFTGALILMIAHGLTSSALFCLANTN-YERTHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIIS 384
Cdd:MTH00210 322 ---NYSTSLFHLMNHAFFKALLFLSAGSViHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILE 398
|
250 260 270
....*....|....*....|....*....|...
gi 1199278046 385 SLFNWSVWTIA--LTGLGTLITAGYSLYMFLMT 415
Cdd:MTH00210 399 LTYDKYYIAFAywLGSFSALLTAFYSIRLIYLT 431
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
99-427 |
6.24e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 38.80 E-value: 6.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 99 LLISLQMLLILAFSATEMIMFYVMFEATLIPTLIIITRWGNQMERLNAGTYFLFYTLAGSLpLLVALLVFQTSAGTLSFL 178
Cdd:MTH00200 9 FILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASAL-LLFGGLLNAWTSGQWGIS 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 179 TISSITPTPLdswaskawwvaCLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLlKLGGygmmriLVILEPLTKEL 258
Cdd:MTH00200 88 EMLGPLSETL-----------ILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQ-KLAP------FALLIQLAPAL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 259 SYPFI-ILALWGIVMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAhgltSSALFCLANTNyer 337
Cdd:MTH00200 150 NSNILlLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVII----TLTVFLLLNLL--- 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199278046 338 tHSRTMLLARGLQMALPLMAAWWFISSLANLALPPLPNLMGELMIISSLFNWS-VWTIALTGLGTLITAGYSLYMFLMTQ 416
Cdd:MTH00200 223 -NSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGlFIYATILLLGSLLSLFFYLRLSYLTL 301
|
330
....*....|.
gi 1199278046 417 RGPLPNHLLSL 427
Cdd:MTH00200 302 LTLSPNQINMM 312
|
|
| |
