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Conserved domains on  [gi|1142892701|gb|AQL39232|]
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carboxylesterase [Pseudomonas syringae pv. actinidiae ICMP 9853]

Protein Classification

alpha/beta hydrolase( domain architecture ID 10785415)

alpha/beta hydrolase family protein catalyzes the hydrolysis of substrates with different chemical composition or physicochemical properties using a nucleophile-His-acid catalytic triad

CATH:  3.40.50.1820
EC:  3.-.-.-
Gene Ontology:  GO:0016787
PubMed:  19508187|12369917|37582413

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
YpfH COG0400
Predicted esterase [General function prediction only];
10-219 1.86e-59

Predicted esterase [General function prediction only];


:

Pssm-ID: 440169 [Multi-domain]  Cd Length: 200  Bit Score: 185.50  E-value: 1.86e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701  10 SGTVDACVIWLHGLGADRYDFLPVAEALQgsLTTARFVLPQAPTRAVtvnggYEMPSWYDIKAMsseARAIDHDQMEASA 89
Cdd:COG0400     1 GGPAAPLVVLLHGYGGDEEDLLPLAPELA--LPGAAVLAPRAPVPEG-----PGGRAWFDLSFL---EGREDEEGLAAAA 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701  90 LQVISLIEQ-QRDSGIDPSRIFLAGFSQGGAVVLHVGyRRWQGPLGGVLALSTYAPTFNKDMTLSDSQKRIPAYCLHGQH 168
Cdd:COG0400    71 EALAAFIDElEARYGIDPERIVLAGFSQGAAMALSLA-LRRPELLAGVVALSGYLPGEEALPAPEAALAGTPVFLAHGTQ 149

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1142892701 169 DEVVHYPMGRAVYDHLKAQGVTVGWQEYPMGHQVLPQEIHDIGVWLAEKLR 219
Cdd:COG0400   150 DPVIPVERAREAAEALEAAGADVTYREYPGGHEISPEELADARAWLAERLA 200
 
Name Accession Description Interval E-value
YpfH COG0400
Predicted esterase [General function prediction only];
10-219 1.86e-59

Predicted esterase [General function prediction only];


Pssm-ID: 440169 [Multi-domain]  Cd Length: 200  Bit Score: 185.50  E-value: 1.86e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701  10 SGTVDACVIWLHGLGADRYDFLPVAEALQgsLTTARFVLPQAPTRAVtvnggYEMPSWYDIKAMsseARAIDHDQMEASA 89
Cdd:COG0400     1 GGPAAPLVVLLHGYGGDEEDLLPLAPELA--LPGAAVLAPRAPVPEG-----PGGRAWFDLSFL---EGREDEEGLAAAA 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701  90 LQVISLIEQ-QRDSGIDPSRIFLAGFSQGGAVVLHVGyRRWQGPLGGVLALSTYAPTFNKDMTLSDSQKRIPAYCLHGQH 168
Cdd:COG0400    71 EALAAFIDElEARYGIDPERIVLAGFSQGAAMALSLA-LRRPELLAGVVALSGYLPGEEALPAPEAALAGTPVFLAHGTQ 149

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1142892701 169 DEVVHYPMGRAVYDHLKAQGVTVGWQEYPMGHQVLPQEIHDIGVWLAEKLR 219
Cdd:COG0400   150 DPVIPVERAREAAEALEAAGADVTYREYPGGHEISPEELADARAWLAERLA 200
Abhydrolase_2 pfam02230
Phospholipase/Carboxylesterase; This family consists of both phospholipases and ...
 1-210 6.43e-34

Phospholipase/Carboxylesterase; This family consists of both phospholipases and carboxylesterases with broad substrate specificity, and is structurally related to alpha/beta hydrolases pfam00561.


Pssm-ID: 396693 [Multi-domain]  Cd Length: 217  Bit Score: 120.56  E-value: 6.43e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701   1 MSEPLIIQPSGTVDACVIWLHGLGADrydflPVAEALQGSLTTA----RFVLPQAPTRAVTVNGGYEMPSWYDIKAMSSE 76
Cdd:pfam02230   1 NGCAEVVSPRDPAQATVIFLHGLGDS-----GHGWADAAKTEAPlpniKFIFPHGPEIPVTLNGGMRMPAWFDLVGLSPN 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701  77 ARAiDHDQMEASALQVISLIEQQRDSGIDPSRIFLAGFSQGGAVVLHVGYrRWQGPLGGVLALSTYAP---TFNKDMTLS 153
Cdd:pfam02230  76 AKE-DEAGIKNSAETIEELIDAEQKKGIPSSRIIIGGFSQGAMLALYSAL-TLPLPLGGIVAFSGFLPlptKFPSHPNLV 153

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1142892701 154 DsqKRIPAYCLHGQHDEVVHYPMGRAVYDHLKAQGVTVGWQEYP-MGHQVLPQEIHDI 210
Cdd:pfam02230 154 T--KKTPIFLIHGEEDPVVPLALGKLAKEYLKTSLNKVELKIYEgLAHSICGREMQDI 209
PRK11460 PRK11460
putative hydrolase; Provisional
 8-191 2.34e-05

putative hydrolase; Provisional


Pssm-ID: 183144 [Multi-domain]  Cd Length: 232  Bit Score: 43.87  E-value: 2.34e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701   8 QPSGTVDACVIWLHGLGADRYDFLPVAEALQGSLTTARFVLPQAPTRAvtvnGGYEMPSWYDIKAMSSEARAidhdqmEA 87
Cdd:PRK11460   10 SPDKPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPS----GNGAGRQWFSVQGITEDNRQ------AR 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701  88 SALQVISLIE----QQRDSGIDPSRIFLAGFSQGGAVVLHvGYRRWQGPLGGVLALS-TYAptfnkdmTLSDSQkriPAY 162
Cdd:PRK11460   80 VAAIMPTFIEtvryWQQQSGVGASATALIGFSQGAIMALE-AVKAEPGLAGRVIAFSgRYA-------SLPETA---PTA 148

                         170       180       190
                  ....*....|....*....|....*....|...
gi 1142892701 163 C----LHGQHDEVVHYPMGRAVYDHLKAQGVTV 191
Cdd:PRK11460  149 TtihlIHGGEDPVIDVAHAVAAQEALISLGGDV 181
 
Name Accession Description Interval E-value
YpfH COG0400
Predicted esterase [General function prediction only];
10-219 1.86e-59

Predicted esterase [General function prediction only];


Pssm-ID: 440169 [Multi-domain]  Cd Length: 200  Bit Score: 185.50  E-value: 1.86e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701  10 SGTVDACVIWLHGLGADRYDFLPVAEALQgsLTTARFVLPQAPTRAVtvnggYEMPSWYDIKAMsseARAIDHDQMEASA 89
Cdd:COG0400     1 GGPAAPLVVLLHGYGGDEEDLLPLAPELA--LPGAAVLAPRAPVPEG-----PGGRAWFDLSFL---EGREDEEGLAAAA 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701  90 LQVISLIEQ-QRDSGIDPSRIFLAGFSQGGAVVLHVGyRRWQGPLGGVLALSTYAPTFNKDMTLSDSQKRIPAYCLHGQH 168
Cdd:COG0400    71 EALAAFIDElEARYGIDPERIVLAGFSQGAAMALSLA-LRRPELLAGVVALSGYLPGEEALPAPEAALAGTPVFLAHGTQ 149

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1142892701 169 DEVVHYPMGRAVYDHLKAQGVTVGWQEYPMGHQVLPQEIHDIGVWLAEKLR 219
Cdd:COG0400   150 DPVIPVERAREAAEALEAAGADVTYREYPGGHEISPEELADARAWLAERLA 200
Abhydrolase_2 pfam02230
Phospholipase/Carboxylesterase; This family consists of both phospholipases and ...
 1-210 6.43e-34

Phospholipase/Carboxylesterase; This family consists of both phospholipases and carboxylesterases with broad substrate specificity, and is structurally related to alpha/beta hydrolases pfam00561.


Pssm-ID: 396693 [Multi-domain]  Cd Length: 217  Bit Score: 120.56  E-value: 6.43e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701   1 MSEPLIIQPSGTVDACVIWLHGLGADrydflPVAEALQGSLTTA----RFVLPQAPTRAVTVNGGYEMPSWYDIKAMSSE 76
Cdd:pfam02230   1 NGCAEVVSPRDPAQATVIFLHGLGDS-----GHGWADAAKTEAPlpniKFIFPHGPEIPVTLNGGMRMPAWFDLVGLSPN 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701  77 ARAiDHDQMEASALQVISLIEQQRDSGIDPSRIFLAGFSQGGAVVLHVGYrRWQGPLGGVLALSTYAP---TFNKDMTLS 153
Cdd:pfam02230  76 AKE-DEAGIKNSAETIEELIDAEQKKGIPSSRIIIGGFSQGAMLALYSAL-TLPLPLGGIVAFSGFLPlptKFPSHPNLV 153

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1142892701 154 DsqKRIPAYCLHGQHDEVVHYPMGRAVYDHLKAQGVTVGWQEYP-MGHQVLPQEIHDI 210
Cdd:pfam02230 154 T--KKTPIFLIHGEEDPVVPLALGKLAKEYLKTSLNKVELKIYEgLAHSICGREMQDI 209
COG4099 COG4099
Predicted peptidase [General function prediction only];
92-200 3.11e-10

Predicted peptidase [General function prediction only];


Pssm-ID: 443275 [Multi-domain]  Cd Length: 235  Bit Score: 58.06  E-value: 3.11e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701  92 VISLIEQ-QRDSGIDPSRIFLAGFSQGGAVVLHVGYR---RWQG--PLGGVLALSTYAPTfnkdmtlsdsqKRIPAYCLH 165
Cdd:COG4099   109 VLALLDDlIAEYRIDPDRIYLTGLSMGGYGTWDLAARypdLFAAavPICGGGDPANAANL-----------KKVPVWIFH 177

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1142892701 166 GQHDEVVHYPMGRAVYDHLKAQGVTVGWQEYP-MGH 200
Cdd:COG4099   178 GAKDDVVPVEESRAMVEALKAAGADVKYTEYPgVGH 213
Aes COG0657
Acetyl esterase/lipase [Lipid transport and metabolism];
95-200 8.90e-10

Acetyl esterase/lipase [Lipid transport and metabolism];


Pssm-ID: 440422 [Multi-domain]  Cd Length: 207  Bit Score: 56.42  E-value: 8.90e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701  95 LIEQQRDSGIDPSRIFLAGFSQGGAVVLHVGYR---RWQGPLGGVLALstYAPTfnkDMTLSDSQKRI----PAYCLHGQ 167
Cdd:COG0657    74 LRANAAELGIDPDRIAVAGDSAGGHLAAALALRardRGGPRPAAQVLI--YPVL---DLTASPLRADLaglpPTLIVTGE 148

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1142892701 168 HDEVVhyPMGRAVYDHLKAQGVTVGWQEYP-MGH 200
Cdd:COG0657   149 ADPLV--DESEALAAALRAAGVPVELHVYPgGGH 180
DAP2 COG1506
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
103-219 1.08e-07

Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];


Pssm-ID: 441115 [Multi-domain]  Cd Length: 234  Bit Score: 50.79  E-value: 1.08e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701 103 GIDPSRIFLAGFSQGGAVVLHVGYR---RWQG--PLGGVLALSTYAPTFN-----------------KDMTLSDSQKRI- 159
Cdd:COG1506    89 YVDPDRIGIYGHSYGGYMALLAAARhpdRFKAavALAGVSDLRSYYGTTReyterlmggpwedpeayAARSPLAYADKLk 168

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1142892701 160 -PAYCLHGQHDEVVHYPMGRAVYDHLKAQGVTVGWQEYP-MGHQVL----PQEIHDIGVWLAEKLR 219
Cdd:COG1506   169 tPLLLIHGEADDRVPPEQAERLYEALKKAGKPVELLVYPgEGHGFSgagaPDYLERILDFLDRHLK 234
PldB COG2267
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];
9-216 1.40e-07

Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];


Pssm-ID: 441868 [Multi-domain]  Cd Length: 221  Bit Score: 50.39  E-value: 1.40e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701   9 PSGTVDACVIWLHGLGADRYDFLPVAEALQGS-LTTARFVLPqaptravtvngGYempswydikAMSSEARA--IDHDQM 85
Cdd:COG2267    23 PAGSPRGTVVLVHGLGEHSGRYAELAEALAAAgYAVLAFDLR-----------GH---------GRSDGPRGhvDSFDDY 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701  86 EASALQVISLIEQQRDSgidpsRIFLAGFSQGGAVVLHVGYRRWQGPLGGVLA--------LSTYAPTFNKDMTLSDSQK 157
Cdd:COG2267    83 VDDLRAALDALRARPGL-----PVVLLGHSMGGLIALLYAARYPDRVAGLVLLapayradpLLGPSARWLRALRLAEALA 157

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1142892701 158 RI--PAYCLHGQHDEVVHYPMGRAVYDHLKAQgvtVGWQEYP-MGHQVL-----PQEIHDIGVWLAE 216
Cdd:COG2267   158 RIdvPVLVLHGGADRVVPPEAARRLAARLSPD---VELVLLPgARHELLneparEEVLAAILAWLER 221
Fes COG2382
Enterochelin esterase or related enzyme [Inorganic ion transport and metabolism];
17-200 4.65e-07

Enterochelin esterase or related enzyme [Inorganic ion transport and metabolism];


Pssm-ID: 441948 [Multi-domain]  Cd Length: 314  Bit Score: 49.47  E-value: 4.65e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701  17 VIWLHGLGADRYDFL---PVAEALQgSLTTARfVLPqaPTRAVTVNGGYEMPSWYDIKAMSSEARAIDHDqmeasalqVI 93
Cdd:COG2382   115 LYLLDGGGGDEQDWFdqgRLPTILD-NLIAAG-KIP--PMIVVMPDGGDGGDRGTEGPGNDAFERFLAEE--------LI 182

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701  94 SLIEQQRDSGIDPSRIFLAGFSQGGAVVLHVGYRRWQGpLGGVLALSTYAPTFNKDMTLSDSQKRIPAYCLH-------- 165
Cdd:COG2382   183 PFVEKNYRVSADPEHRAIAGLSMGGLAALYAALRHPDL-FGYVGSFSGSFWWPPGDADRGGWAELLAAGAPKkplrfyld 261

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1142892701 166 -GQHDEVvhYPMGRAVYDHLKAQGVTVGWQEYPMGH 200
Cdd:COG2382   262 vGTEDDL--LEANRALAAALKAKGYDVEYREFPGGH 295
DLH COG0412
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];
77-200 2.34e-06

Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440181 [Multi-domain]  Cd Length: 226  Bit Score: 46.88  E-value: 2.34e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701  77 ARAIDHDQMEASALQVISLIEQQrdSGIDPSRIFLAGFSQGGAVVLHVGYRRwqgplGGVLALSTYAPTFNKDMTLSDSQ 156
Cdd:COG0412    81 MGALDPELLAADLRAALDWLKAQ--PEVDAGRVGVVGFCFGGGLALLAAARG-----PDLAAAVSFYGGLPADDLLDLAA 153

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1142892701 157 K-RIPAYCLHGQHDEVVHYPMGRAVYDHLKAQGVTVGWQEYP-MGH 200
Cdd:COG0412   154 RiKAPVLLLYGEKDPLVPPEQVAALEAALAAAGVDVELHVYPgAGH 199
PRK11460 PRK11460
putative hydrolase; Provisional
 8-191 2.34e-05

putative hydrolase; Provisional


Pssm-ID: 183144 [Multi-domain]  Cd Length: 232  Bit Score: 43.87  E-value: 2.34e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701   8 QPSGTVDACVIWLHGLGADRYDFLPVAEALQGSLTTARFVLPQAPTRAvtvnGGYEMPSWYDIKAMSSEARAidhdqmEA 87
Cdd:PRK11460   10 SPDKPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPS----GNGAGRQWFSVQGITEDNRQ------AR 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701  88 SALQVISLIE----QQRDSGIDPSRIFLAGFSQGGAVVLHvGYRRWQGPLGGVLALS-TYAptfnkdmTLSDSQkriPAY 162
Cdd:PRK11460   80 VAAIMPTFIEtvryWQQQSGVGASATALIGFSQGAIMALE-AVKAEPGLAGRVIAFSgRYA-------SLPETA---PTA 148

                         170       180       190
                  ....*....|....*....|....*....|...
gi 1142892701 163 C----LHGQHDEVVHYPMGRAVYDHLKAQGVTV 191
Cdd:PRK11460  149 TtihlIHGGEDPVIDVAHAVAAQEALISLGGDV 181
LpqC COG3509
Acetyl xylan esterase AxeA and related esterases, LpqC family [Carbohydrate transport and ...
 17-182 1.10e-04

Acetyl xylan esterase AxeA and related esterases, LpqC family [Carbohydrate transport and metabolism];


Pssm-ID: 442732 [Multi-domain]  Cd Length: 284  Bit Score: 41.91  E-value: 1.10e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701  17 VIWLHGLG------ADRYDFLPVAEAlqgslttARF--VLPQAPTRAVTvnggyemPSWyDIKAMSSEARAIDhdqmEAS 88
Cdd:COG3509    56 VVALHGCGgsaadfAAGTGLNALADR-------EGFivVYPEGTGRAPG-------RCW-NWFDGRDQRRGRD----DVA 116

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701  89 ALqvISLIEQ-QRDSGIDPSRIFLAGFSQGGAVVLHVGYR---RWQGplGGVLALSTYAPTFNKDMTlsdSQKRIPAYCL 164
Cdd:COG3509   117 FI--AALVDDlAARYGIDPKRVYVTGLSAGGAMAYRLACEypdVFAA--VAPVAGLPYGAASDAACA---PGRPVPVLVI 189

                         170
                  ....*....|....*...
gi 1142892701 165 HGQHDEVVHYPMGRAVYD 182
Cdd:COG3509   190 HGTADPTVPYAGAEETLA 207
COG4188 COG4188
Predicted dienelactone hydrolase [General function prediction only];
17-122 4.06e-04

Predicted dienelactone hydrolase [General function prediction only];


Pssm-ID: 443342 [Multi-domain]  Cd Length: 326  Bit Score: 40.48  E-value: 4.06e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701  17 VIWLHGLGADRYDFLPVAEAL--QGslttarFV--LPQAP--TRAVTVNGGYEMPSWYDIKAMSSEARAIDH--DQMEAS 88
Cdd:COG4188    65 VVLSHGLGGSREGYAYLAEHLasHG------YVvaAPDHPgsNAADLSAALDGLADALDPEELWERPLDLSFvlDQLLAL 138

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1142892701  89 ALQVISLIEQqrdsgIDPSRIFLAGFSQGGAVVL 122
Cdd:COG4188   139 NKSDPPLAGR-----LDLDRIGVIGHSLGGYTAL 167
FrsA COG1073
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; ...
 61-182 4.53e-04

Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms];


Pssm-ID: 440691 [Multi-domain]  Cd Length: 253  Bit Score: 40.28  E-value: 4.53e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142892701  61 GYEMPSWYDIKAmssearAIDHdqmeasalqvislIEQQRdsGIDPSRIFLAGFSQGGAVVLHV--------------GY 126
Cdd:COG1073    84 EEGSPERRDARA------AVDY-------------LRTLP--GVDPERIGLLGISLGGGYALNAaatdprvkavildsPF 142

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1142892701 127 --------RRWQGPLGGVLALSTYAPT------FNKDMTLSDSQKRI--PAYCLHGQHDEVVHYPMGRAVYD 182
Cdd:COG1073   143 tsledlaaQRAKEARGAYLPGVPYLPNvrlaslLNDEFDPLAKIEKIsrPLLFIHGEKDEAVPFYMSEDLYE 214
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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