|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-455 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 721.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 1 LIPTFMLFPTIWLTSPKWLWTTTTAHSLLIAFISLTWLKWTSETGWASSNMYLATDPLSIPLLVLTCWLLPLMILASQNH 80
Cdd:MTH00127 5 LIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILASQNH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 81 INPEPISRQRLYISLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVA 160
Cdd:MTH00127 85 TAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 161 LLLLQQSTGTLSMLVLQYSQPLQLSSWGHMIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGM 240
Cdd:MTH00127 165 LLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGM 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 241 MRMMVMLDPLSKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVS 320
Cdd:MTH00127 245 MRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTS 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 321 SMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSPWTVLLTGLGTLIT 400
Cdd:MTH00127 325 SALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLIT 404
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 1137303815 401 AGYSLYMFLMSQRGQVPNHITGLQPFHTREHLLMTLHLIPVILLVTKPELMWGWC 455
Cdd:MTH00127 405 AGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-454 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 685.49 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 1 LIPTFMLFPTIWLTSPKWLWTTTTAHSLLIAFISLTWLKWTSETgWASSNMYLATDPLSIPLLVLTCWLLPLMILASQNH 80
Cdd:MTH00068 5 IIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSET-MNFTNKYFGIDQISSPLLILTCWLLPLMILASQNH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 81 INPEPISRQRLYISLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVA 160
Cdd:MTH00068 84 LKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 161 LLLLQQSTGTLSMLVLQYSQPLQLSSWGHMIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGM 240
Cdd:MTH00068 164 LLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGI 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 241 MRMMVMLDPLSKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVS 320
Cdd:MTH00068 244 LRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTS 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 321 SMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSPWTVLLTGLGTLIT 400
Cdd:MTH00068 324 SALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLIT 403
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1137303815 401 AGYSLYMFLMSQRGQVPNHITGLQPFHTREHLLMTLHLIPVILLVTKPELMWGW 454
Cdd:MTH00068 404 AAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-454 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 678.84 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 1 LIPTFMLFPTIWLTSPKWLWTTTTAHSLLIAFISLTWLKWTSETGwASSNMYLATDPLSIPLLVLTCWLLPLMILASQNH 80
Cdd:MTH00124 5 ILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPT-KNLTQWLGIDQISAPLLVLSCWLLPLMILASQNH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 81 INPEPISRQRLYISLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVA 160
Cdd:MTH00124 84 LQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPLLIA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 161 LLLLQQSTGTLSMLVLQYSQPLQLSSWGHMIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGM 240
Cdd:MTH00124 164 ILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGI 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 241 MRMMVMLDPLSKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVS 320
Cdd:MTH00124 244 IRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTS 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 321 SMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSPWTVLLTGLGTLIT 400
Cdd:MTH00124 324 SMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLATLIT 403
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1137303815 401 AGYSLYMFLMSQRGQVPNHITGLQPFHTREHLLMTLHLIPVILLVTKPELMWGW 454
Cdd:MTH00124 404 ASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 651.96 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 1 LIPTFMLFPTIWLTSPKWLWTTTTAHSLLIAFISLTWLKWTSETGWASSNMYlATDPLSIPLLVLTCWLLPLMILASQNH 80
Cdd:MTH00110 5 IIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLF-FSDSLSTPLLILTTWLLPLMLMASQHH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 81 INPEPISRQRLYISLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVA 160
Cdd:MTH00110 84 LSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 161 LLLLQQSTGTLSMLVLQYSQPLQLSSWGHMIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGM 240
Cdd:MTH00110 164 LLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGM 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 241 MRMMVMLDPLSKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVS 320
Cdd:MTH00110 244 MRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTS 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 321 SMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSPWTVLLTGLGTLIT 400
Cdd:MTH00110 324 SMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNMLIT 403
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1137303815 401 AGYSLYMFLMSQRGQVPNHITGLQPFHTREHLLMTLHLIPVILLVTKPELMWGWCY 456
Cdd:MTH00110 404 ALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
1-451 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 564.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 1 LIPTFMLFPTIWLTSPKWLWTTTTAHSLLIAFISLTWLKWTSETGWASSNMYLATDPLSIPLLVLTCWLLPLMILASQNH 80
Cdd:MTH00206 3 LIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNH 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 81 INPEPISRQRLYISLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVA 160
Cdd:MTH00206 83 MKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 161 LLLLQQSTGTLSMLVLQYSQplqLSSWGHMIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGM 240
Cdd:MTH00206 163 LLFLQNSLGSLSLYILYFSK---LTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGM 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 241 MRMMVMLDPLSKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVS 320
Cdd:MTH00206 240 MRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVS 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 321 SMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSPWTVLLTGLGTLIT 400
Cdd:MTH00206 320 SALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFT 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1137303815 401 AGYSLYMFLMSQRGQVPNHITGLQPFHTREHLLMTLHLIPVILLVTKPELM 451
Cdd:MTH00206 400 AIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-451 |
1.07e-167 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 479.47 E-value: 1.07e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 1 LIPTFMLFPTIWLTSPKWLWTTTTAHSLLIAFISLTWLKWTSETGWASSNMYLATDPLSIPLLVLTCWLLPLMILASQNH 80
Cdd:MTH00044 5 ILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASINH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 81 INPEPISRQRLYISLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVA 160
Cdd:MTH00044 85 LSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLIS 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 161 LLLLQQSTGTLSMLVLQYSQPLQLSSWGHMIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGM 240
Cdd:MTH00044 165 LIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 241 MRMMVMLD-PLSKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLV 319
Cdd:MTH00044 245 IRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLV 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 320 SSMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSPWTVLLTGLGTLI 399
Cdd:MTH00044 325 SSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVF 404
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1137303815 400 TAGYSLYMFLMSQRGQVPNHITGLQPFHTREHLLMTLHLIPVILLVTKPELM 451
Cdd:MTH00044 405 GAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNII 456
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
45-455 |
1.51e-125 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 370.71 E-value: 1.51e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 45 GWASSNMYLATDPLSIPLLVLTCWLLPLMILASQNHINPepISRQRLYISLLASLQTFLIMAFGATEIIMFYIMFEATLI 124
Cdd:MTH00150 12 SYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKL--RNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 125 PTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQYSQPLQLSSWghmIWWAGCLIAFLVKM 204
Cdd:MTH00150 90 PTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLLVFLAFLVKL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 205 PLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPFIILALWGIIMTGSICLRQTDLKSLIA 284
Cdd:MTH00150 167 PMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 285 YSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANL 364
Cdd:MTH00150 247 YSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINM 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 365 ALPPLPNLMGELTIITTLFNWSPWTVLLTGLGTLITAGYSLYMFLMSQRGQVPNHITGLQPFHTREHLLMTLHLIPVILL 444
Cdd:MTH00150 327 AAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLL 406
|
410
....*....|.
gi 1137303815 445 VTKPELMWGWC 455
Cdd:MTH00150 407 ILKSDLLFMWI 417
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-454 |
3.42e-124 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 368.33 E-value: 3.42e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 1 LIPTFMLFPTIWLTSPKWLwttttAHSLLIAFISLTWLKWTSETGWASSNMYLATDPLSIPLLVLTCWLLPLMILASQNH 80
Cdd:MTH00163 5 LFMLLFLIPLCFLKNSWWL-----VQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 81 INPEPISRQRLYISLLasLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVA 160
Cdd:MTH00163 80 YKKNNYSNLFLFLILF--LLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 161 LLLLQQSTGTLSMLVLQYSqplqlsSWGHMIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGM 240
Cdd:MTH00163 158 IFYLYNNSGSLSFFLLNFF------GSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGL 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 241 MRMMVMLDPLSKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVS 320
Cdd:MTH00163 232 LRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCS 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 321 SMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSPWTVLLTGLGTLIT 400
Cdd:MTH00163 312 SGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFS 391
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1137303815 401 AGYSLYMFLMSQRGQVPNHITGLQPFHTREHLLMTLHLIPVILLVTKPELMWGW 454
Cdd:MTH00163 392 AAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
1.54e-116 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 349.04 E-value: 1.54e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 1 LIPTFMLFPtIWLTSPKWLWTTTTAHSLLIAFISLTWLKWTSeTGWASSNMYLATDPLSIPLLVLTCWLLPLMILASQNH 80
Cdd:MTH00014 5 IMPLISLLL-LPLIKYPWSWALTFSTLLLLSLFTLLNLYPMS-APYSMFTESLSSDMLSAPLITLTLWITALMILASFKI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 81 INPEPISRqrLYISLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVA 160
Cdd:MTH00014 83 FQNNKAPK--TFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 161 LLLLQQSTGTLSMLVLQYSQPLQLSSwghMIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGM 240
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 241 MRMMVMLDPLSKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVS 320
Cdd:MTH00014 238 LRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCS 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 321 SMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSPWTVLLTGLGTLIT 400
Cdd:MTH00014 318 SALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLA 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1137303815 401 AGYSLYMFLMSQRGQVPNHITGLQPFHTREHLLMTLHLIPVILLVTKPELMWGW 454
Cdd:MTH00014 398 AAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNW 451
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
24-450 |
5.84e-112 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 337.34 E-value: 5.84e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 24 TAHSLLIAFISLTWLKWTSETGWASSNMYLATDPLSIPLLVLTCWLLPLMILASQNHInpEPISRQRLYISLLASLQTFL 103
Cdd:MTH00205 24 FSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVF--KSNKNSKLFTVSVIMLLLIL 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 104 IMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLvlqYSQPLQ 183
Cdd:MTH00205 102 ILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMF---FNFPLN 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 184 LSSWGHMIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPFIILAL 263
Cdd:MTH00205 179 FSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISL 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 264 WGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILAR 343
Cdd:MTH00205 259 WGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNK 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 344 GLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSPWTVLLTGLGTLITAGYSLYMFLMSQRGQVPNHITGL 423
Cdd:MTH00205 339 GVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSF 418
|
410 420
....*....|....*....|....*..
gi 1137303815 424 QPFHTREHLLMTLHLIPVILLVTKPEL 450
Cdd:MTH00205 419 LAISEREYYILILHWFPLNILILKLKI 445
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
52-444 |
1.03e-92 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 288.90 E-value: 1.03e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 52 YLATDPLSIPLLVLTCWLLPLMILASQNHINPepisRQRLYISLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIIT 131
Cdd:COG1008 77 HLGVDGISLPLVLLTALLTPLAILASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 132 RWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQYSQpLQLSSWGHMIWWAGCLIAFLVKMPLYGVHL 211
Cdd:COG1008 153 IWGGE-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAA-APLPLTAQLLLFLAFFIAFAVKVPMFPFHT 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 212 WLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPL-SKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSH 290
Cdd:COG1008 231 WLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSH 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 291 MGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPLP 370
Cdd:COG1008 311 MGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTS 390
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1137303815 371 NLMGELTIITTLFNWSPWTVLLTGLGTLITAGYSLYMFlmsQR---GQVPNHITGLQPFHTREHLLMTLHLIPVILL 444
Cdd:COG1008 391 GFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY---QRvffGPLKEELAELPDLNPRELAVLAPLAALILLL 464
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-444 |
4.40e-85 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 269.38 E-value: 4.40e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 50 NMYLATDPLSIPLLVLTCWLLPLMILASQNHINPepisRQRLYISLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLII 129
Cdd:PRK05846 75 SYHLGVDGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 130 ITRWGnQTERLNAGTYFLFYTLAGSLPL----LVALLLLQQSTGTLSMLVLQYsqpLQLSSWGHMIWWAGCLIAFLVKMP 205
Cdd:PRK05846 151 IGVWG-GKNRIYAATKFFLYTLLGSLLMlvaiIYLVVVYYNATGTFDIADLLN---LPLPPGVQYWLFLAFFIAFAVKMP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 206 LYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPL-SKELAYPFIILALWGIIMTGSICLRQTDLKSLIA 284
Cdd:PRK05846 227 MFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIA 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 285 YSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANL 364
Cdd:PRK05846 307 YSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASL 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 365 ALPPLPNLMGELTIITTLFNWSPWTVLLTGLGTLITAGYSLYMFLMSQRGQVPNHITGLQPFHTREHLLMTLHLIPVILL 444
Cdd:PRK05846 387 GLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVALLLLL 466
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
53-444 |
5.75e-80 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 255.63 E-value: 5.75e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 53 LATDPLSIPLLVLTCWLLPLMILASQNHINpepiSRQRLYISLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITR 132
Cdd:TIGR01972 73 LGVDGISLLLVLLTALLTLLAILASWESIQ----KRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 133 WGNQTeRLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQYSQPLqlSSWGHMIWWAGCLIAFLVKMPLYGVHLW 212
Cdd:TIGR01972 149 WGGPN-RIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFDLLELLNLPL--PFGVQTWLFLAFFIAFAVKVPLFPLHTW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 213 LPKAHVEAPVAGSMVLAAVLLKLGGYGMMRM-MVMLDPLSKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHM 291
Cdd:TIGR01972 226 LPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHM 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 292 GLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPLPN 371
Cdd:TIGR01972 306 GFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSG 385
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1137303815 372 LMGELTIITTLFNWSPWTVLLTGLGTLITAGYSLYMFLMSQRGQVPN-HITGLQPFHTREHLLMTLHLIPVILL 444
Cdd:TIGR01972 386 FVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNpEVAEFPDLNGREIAVLAPLVVLILFL 459
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
11-408 |
1.44e-72 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 236.49 E-value: 1.44e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 11 IWLTSPKWLWTTTTAHSLLIA-------FISLTWLKWTSETGWASSNMYLATDPLSIPLLVLTCWLLPLMILASQNHINp 83
Cdd:MTH00217 27 LKKIALEWSLLTLTATILLWAsfdgegqFQAIKKFEWIPGIEPVFGPVVFAVDGISIFFLILTALLTPICILISWNSIK- 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 84 epiSRQRLYISLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLL 163
Cdd:MTH00217 106 ---FLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFT 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 164 LQQSTGTLSMlvlQYSQPLQLSSWGHMIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRM 243
Cdd:MTH00217 183 LYSYAGTTDY---QALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRF 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 244 MVMLDPLSKELAYPFI-ILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSM 322
Cdd:MTH00217 260 SWPLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSA 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 323 LFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSPWTVLLTGLGTLITAG 402
Cdd:MTH00217 340 LFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAG 419
|
....*.
gi 1137303815 403 YSLYMF 408
Cdd:MTH00217 420 YSIYLY 425
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
28-444 |
1.66e-72 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 236.50 E-value: 1.66e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 28 LLIAFISLTWLKWTSETGWASSN--------MYLATDPLSIPLLVLTCWLLPLMILASQNHINpepiSRQRLYISLLASL 99
Cdd:MTH00204 46 LWGAFDGEGQFQFINLIEWIISPtlnfqwgpLVFAVDGVSLFFILLTTLLIPICILISWKSIK----FLFKEFLLCLLFL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 100 QTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQYS 179
Cdd:MTH00204 122 EVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNI 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 180 Q-PLQLSSWGhmiwWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPF 258
Cdd:MTH00204 202 KlPLSIQKWL----LVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPL 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 259 II-LALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSR 337
Cdd:MTH00204 278 IVmLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTR 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 338 TMILARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSPWTVLLTGLGTLITAGYSLYMFLMSQRGQVP 417
Cdd:MTH00204 358 LIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGS 437
|
410 420
....*....|....*....|....*..
gi 1137303815 418 NHITGLQPFHTREHLLMTLHLIPVILL 444
Cdd:MTH00204 438 NYLLFSRDLNRRELLAILPLIIAIFLL 464
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
109-397 |
5.76e-68 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 218.72 E-value: 5.76e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 109 ATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQYSQPLQLSSWG 188
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 189 HMIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPFIILALWGIIM 268
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 269 TGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLA-NTAYERTHSRTMILARGLQV 347
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1137303815 348 IFPLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSPWTVLLTGLGT 397
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
51-430 |
1.77e-64 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 215.94 E-value: 1.77e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 51 MYLATDPLSIPLLVLTCWLLPLMILASQNHINpepiSRQRLYISLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIII 130
Cdd:MTH00226 96 LVFAVDGISIYFIILTGFIVPCSILISWHSVK----YLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLIL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 131 TRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVL---QYSQPLQLSSWghmiWWAGCLIAFLVKMPLY 207
Cdd:MTH00226 172 GIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLascSHVVSEQTQKW----IFLGIFLAMAVKIPIF 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 208 GVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPL-SKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYS 286
Cdd:MTH00226 248 PFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYS 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 287 SVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLAL 366
Cdd:MTH00226 328 SVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAV 407
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1137303815 367 PPLPNLMGELTIITTLFNWSPWTVLLTGLGTLITAGYSLYMFLMSQRGQVPNHITGLQPFHTRE 430
Cdd:MTH00226 408 PPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRRE 471
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-407 |
9.07e-56 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 192.94 E-value: 9.07e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 53 LATDPLSIPLLVLTCWLLPLMILASQNhINPEPisrqRLYISLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITR 132
Cdd:PRK12561 55 LGVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 133 WGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQQSTG--TLSMLVL---QYSQPLQLsswghmIWWAGCLIAFLVKMPLY 207
Cdd:PRK12561 130 WGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDtfTFDLAELgakSYPLALEL------LLYAGFLIAFGVKLPIF 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 208 GVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMV-MLDPLSKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYS 286
Cdd:PRK12561 203 PLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYS 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 287 SVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLAL 366
Cdd:PRK12561 283 SVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLAL 362
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1137303815 367 PPLPNLMGELTI---ITTLFNWSPW----TVLLTGLGTLITAGYSLYM 407
Cdd:PRK12561 363 PGMSGFVSELTVflgITSSDVYSSTfrtiTILLAAVGLILTPIYLLSM 410
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
17-412 |
1.27e-47 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 169.17 E-value: 1.27e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 17 KWLWTTTTAHSLLIAFISLTWLKWTSET------GW-ASSNMYLATDPLSIPLLVLTCWLLPLMILASQNHINPEpiSRQ 89
Cdd:COG0651 29 QRALSLLASLALLALALALLLQVLAGGPlvyalgGWpAPFGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHE--RRG 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 90 RLYISLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQQSTG 169
Cdd:COG0651 107 RRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATG 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 170 TLSMLVLQYSQPLQLSSWGHMIWWAgCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDP 249
Cdd:COG0651 186 TLNMADLAARLAELDPGLLLAAFAL-LLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFG 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 250 --LSKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLA 327
Cdd:COG0651 265 adPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAA 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 328 NTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSPWTVLLTGL-GTLITAGYSLY 406
Cdd:COG0651 345 GAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLlSSLLTLAYFVR 424
|
....*.
gi 1137303815 407 MFLMSQ 412
Cdd:COG0651 425 IFGRAQ 430
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
50-454 |
5.69e-44 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 161.02 E-value: 5.69e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 50 NMYLATDPLSIPLLVLTCWLLPLMILASQnhinpEPISRQRLYISLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLII 129
Cdd:PRK06473 72 SYHLGVDGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 130 ITRWGNQtERLNAGTYFLFYT-LAGSLPLLVALLLLQQSTGTLSMLVLQYSQPLQLSSwgHMIWWAGCLIAFLVKMPLYG 208
Cdd:PRK06473 147 IAIWGGQ-RRGYAATKFLLYTaISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLST--QLLLLAPILVGFGIKIPLVP 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 209 VHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPFiiLALWGII--MTGSIC-LRQTDLKSLIAY 285
Cdd:PRK06473 224 FHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPW--LATWAVVsvLYGASCaIAQKDMKKMVAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 286 SSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGL---QVIFPLTATWWFLANLA 362
Cdd:PRK06473 302 SSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMA 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 363 NLALPPLPNLMGELTIITTLFNWSPWTVLLTGLGTLITAGYSLYMFLMSQRGQVPNHITGLQPFHTREHLLMTLHLIPVI 442
Cdd:PRK06473 382 SAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPRVLWSERLPALVLAVLIV 461
|
410
....*....|..
gi 1137303815 443 LLVTKPELMWGW 454
Cdd:PRK06473 462 VLGIQPSWLVRW 473
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
102-406 |
5.88e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 156.22 E-value: 5.88e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 102 FLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLllqqstgtLSMLVLQYSQP 181
Cdd:MTH00094 74 ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL--------KNFFFFSLCYF 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 182 LQLSSWGHMIWwagCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELaypFIIL 261
Cdd:MTH00094 146 DFFLSWEMFFI---LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFVYNNF---WIIF 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 262 ALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMIL 341
Cdd:MTH00094 220 SLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYF 299
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1137303815 342 ARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSPWTVLLTGLGTLITAGYSLY 406
Cdd:MTH00094 300 MNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLF 364
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-451 |
2.25e-42 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 157.18 E-value: 2.25e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 53 LATDPLSIPLLVLTCWLLPLMILASQnhinpePIS-RQRLYISLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIIT 131
Cdd:PRK02546 83 VGADGLSMPLILLTGFITTLAVLAAW------PVTfKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLA 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 132 RWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLS--MLVL---QYSQPLQLsswghmIWWAGCLIAFLVKMPL 206
Cdd:PRK02546 157 IWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTfdMTALaakDFGLGFQL------LCYAGLLIAYGVKLPI 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 207 YGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYP-FIILALWGIIMTGSICLRQTDLKSLIAY 285
Cdd:PRK02546 230 VPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLGVVNIIYAALTSFAQRNLKRKIAY 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 286 SSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHsrTMIL------ARGLQVIFPLtatwWFLA 359
Cdd:PRK02546 310 SSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTH--TLMLdemggvGQKMRKMFAM----WTAC 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 360 NLANLALPPLPNLMGELTIITTLFNWSPWT-------VLLTGLGTLITAGYSLYM----FLMSQRGQVPNHiTGLQPFHT 428
Cdd:PRK02546 384 SLASLALPGMSGFVAELMVFVGFATSDAYTlpfrvvvVFLAAVGVILTPIYLLSMlreiFFGPENKELVSH-EKLVDAEP 462
|
410 420
....*....|....*....|...
gi 1137303815 429 REHLLMTLHLIPVILLVTKPELM 451
Cdd:PRK02546 463 REVFIIACLLVPIIGIGLYPKLV 485
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
53-407 |
1.09e-41 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 154.72 E-value: 1.09e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 53 LATDPLSIPLLVLTCWLLPLMILASQnhinpePISRQ-RLYISLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIIT 131
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 132 RWGNQtERLNAGTYFLFYTLAGSLPLLVALLLL-----QQSTGTLSMLVLQySQPLQLSswghMIWWAGCLIAFLVKMPL 206
Cdd:CHL00011 154 MWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMglygsNEPTLNFETLANQ-SYPVALE----ILFYIGFLIAYAVKLPI 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 207 YGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPF-IILALWGIIMTGSICLRQTDLKSLIAY 285
Cdd:CHL00011 228 IPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWlVIVGAIQIIYAASTSLGQRNLKKRIAY 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 286 SSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERThsRTMILAR--GLQVIFPLTATWWFLANLAN 363
Cdd:CHL00011 308 SSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMAS 385
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1137303815 364 LALPPLPNLMGELT----IITT---LFNWSPWTVLLTGLGTLITAGYSLYM 407
Cdd:CHL00011 386 LALPGMSGFVAELIvffgIITSqkyLLMPKILITFVMAIGMILTPIYLLSM 436
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
37-403 |
8.55e-30 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 121.36 E-value: 8.55e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 37 WLKWTSETGWASSnmyLATDPLSIPLLVLTCWLLPLMILASQnhinpEPISRQRLYISLLASLQTFLIMAFGATEIIMFY 116
Cdd:PRK07363 62 YLPWNEPLGLSYS---LGVDGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFF 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 117 IMFEATLIPTLIIITRWGNQtERLNAGTYFLFYT-LAGSLPLLVALLLLQQSTGTLSMLVLQYSQPLQLSSwgHMIWWAG 195
Cdd:PRK07363 134 LFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTaVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNT--QLILLTG 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 196 CLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPfiILALWGII--MTGS-I 272
Cdd:PRK07363 211 LLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTIsvIYGAlS 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 273 CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQVI---F 349
Cdd:PRK07363 289 AIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgL 368
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1137303815 350 PLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSPWTVLLTGLGTLITAGY 403
Cdd:PRK07363 369 PLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY 422
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-106 |
1.42e-29 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 111.46 E-value: 1.42e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 1 LIPTFMLFPTIWLTSPKWLWTTTTAHSLLIAFISLTWLKWTSETGWASSNMYLATDPLSIPLLVLTCWLLPLMILASQNH 80
Cdd:pfam01059 5 LLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILASQKH 84
|
90 100
....*....|....*....|....*.
gi 1137303815 81 INPEPISRQRLYISLLASLQTFLIMA 106
Cdd:pfam01059 85 LKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
197-444 |
8.79e-26 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 109.63 E-value: 8.79e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 197 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLD-PLSKELAYP-FIILALWGIIMTGSICL 274
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaAIGSDFPGRlLLIFGLLSVLVAAFFLL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 275 RQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQVIFPLTAT 354
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGW 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 355 WWFLANLANLALPPLPNLMGELTIITTLFNWSPWT---VLLTGLGTLITAgyslyMFLMSQRgqvpnHITGLQPFHTREH 431
Cdd:PRK06458 381 GLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLiaiLLLLLLTLAFAA-----LVRRVAG-----MVFGEPPEAVNRG 450
|
250
....*....|...
gi 1137303815 432 LLMTLHLIPVILL 444
Cdd:PRK06458 451 DLGWLTTSPMFVH 463
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
53-403 |
2.33e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 108.43 E-value: 2.33e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 53 LATDPLSIPLLVLTCWLLPLMILASQnhinPEPISRQRLYISLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITR 132
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAI----GYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAM 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 133 WGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQYSQPlqlSSWGHMIWWAGCLIAFLVKMPLYGVHLW 212
Cdd:PRK08375 149 GGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA---ENPTVVTAFGFVLLALALKAAVFPLHTW 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 213 LPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMV----MLDPLSKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSV 288
Cdd:PRK08375 225 LPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFtvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTV 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 289 SHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPP 368
Cdd:PRK08375 305 SQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPP 384
|
330 340 350
....*....|....*....|....*....|....*.
gi 1137303815 369 LPNLMGELTIITTLFN-WSPWTVLLTGLGTLITAGY 403
Cdd:PRK08375 385 TSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-395 |
9.84e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 106.59 E-value: 9.84e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 1 LIPTFMLFPTIWLTSPKWLWTTTTAHSLLIAFISLTWLKWTSET------GW-ASSNMYLATDPLSIPLLVLTCWLLPLM 73
Cdd:PRK12667 19 LLPLLSILLKGNRKIQKIYALLVSLITLILSILLFIQVYSSNKPivylfgGWpAPIGIVYEVDLLGALLGLLTALVMFLI 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 74 ILASQNHInpEPISRQRLYISLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAG 153
Cdd:PRK12667 99 LIYSYWYL--EHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVG 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 154 SLPLLVALLLLQQSTGTLSMLVL-----QYSQPLQLSSWGHMIWWAG-----CLIAFLVKMPLYGVHLWLPKAHVEAPVA 223
Cdd:PRK12667 177 TTLYFLALAFLYATFGTLNMADLsakirGLSFPLTGGLAGNPPLALGvalalALWAFTIKAAIFPNHFWLPDAHPAAPSP 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 224 GSMVLAAVLLKLGGYGMMRMMVM-------LDPLSKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAG 296
Cdd:PRK12667 257 VSAMLSGLVVNVGAYAIIRFLYTifgispsLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFM 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 297 GILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPLPNLMGEL 376
Cdd:PRK12667 337 GIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKL 416
|
410
....*....|....*....
gi 1137303815 377 TIITTLFNWSPWTVLLTGL 395
Cdd:PRK12667 417 LLFNALLESGFYLPALVLL 435
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
197-428 |
2.86e-19 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 90.20 E-value: 2.86e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 197 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPFIILALwGIIMTGSIC--- 273
Cdd:PRK08676 213 FIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsm 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 274 LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQVIFPLTA 353
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAA 371
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1137303815 354 TWWFLANLANLALPPLPNLMGELTIITTLFNWSPWTVLLTgLGTLITAGYSLYMFLMSQRGQVPNHITGLQPFHT 428
Cdd:PRK08676 372 WGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAV-LLLLLLAASSFAIFLLKAFTRVSEGNADRPVFRT 445
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
87-403 |
1.51e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 87.70 E-value: 1.51e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 87 SRQRLYISLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITrWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQ 166
Cdd:PRK07234 91 AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 167 STGTLSMLVLQYSQPLQLSswghmiwwagcLIA--FLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMM 244
Cdd:PRK07234 170 ANGTFAFSGLATADPEAFA-----------LIAlgLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 245 VMLDPLSKELAYPFIILALWGIImtgsICLRQTDLKSLIAYSSVSHMGLVAGGILIqtpwgfsgAIILMIAHGLVSSMLF 324
Cdd:PRK07234 239 LDVPGLDLIVRIFGVGTALLGVL----FALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLF 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 325 CLANTAYERTHS--RTMILARGlqvifpltaTWWFLAnLANLALPPLPNLMGELTIITTLFNWSPWTVLLTGLGTLITAG 402
Cdd:PRK07234 307 LCAGALPSRNFTelISQMLGIG---------KWIPLT-MASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNLAAVGTAA 376
|
.
gi 1137303815 403 Y 403
Cdd:PRK07234 377 S 377
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
103-383 |
1.76e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 82.09 E-value: 1.76e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 103 LIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQYSQPL 182
Cdd:PRK08667 124 MLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGI 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 183 QLSSWghmiwwAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRmmVMLDPLSKELAYPFIIL- 261
Cdd:PRK08667 204 LSLVF------LLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVR--FLMDVLSPELWWGVLILl 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 262 -----ALWGIIMTgsicLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSG-----------AIILMIAHGLVSSMLFC 325
Cdd:PRK08667 276 agsisALLGVIYA----LKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGldtlallalggALFHSLNHALFKSLLFL 351
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1137303815 326 LANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLF 383
Cdd:PRK08667 352 TAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
107-369 |
3.29e-16 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 80.81 E-value: 3.29e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 107 FGATEIIMFYIMFEATLIPTLIIITrWGNQTERLNAGTYFLFYTLaGSLPLLVALLLLQQSTGTLSMLVLqySQPLQLSS 186
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVLSAI-GAYAMLYAIFLIYAKTGTFDFADI--SQGLINDT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 187 WGHMIWWAGCLI--AFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLdPLSK------------ 252
Cdd:PRK08668 191 STGFALIVFLFLlaFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVL-PGTKlfsefgtyrgvp 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 253 ELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYE 332
Cdd:PRK08668 270 LFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIY 349
|
250 260 270
....*....|....*....|....*....|....*..
gi 1137303815 333 RTHSRTMILARGLQVIFPLTATWWFLANLANLALPPL 369
Cdd:PRK08668 350 RTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPM 386
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
101-406 |
6.21e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 80.01 E-value: 6.21e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 101 TFLI------MAFGATEIIMFYIMFEATLIPTLIIITRwGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSML 174
Cdd:PRK12665 116 TYLIlvagvsNAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 175 vlQYSQPLQ-LSSWGHMIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPlSKE 253
Cdd:PRK12665 195 --DLAVRLDeLPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGG 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 254 LAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYER 333
Cdd:PRK12665 272 LDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQ 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1137303815 334 THSRTMILARGLQVIFPLTATWWFLANLaNLA-LPPLPNLMGELTIITT-LFNWSPWTVLLTGlGTLITAGYSLY 406
Cdd:PRK12665 352 AGSSSLRRLGGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKVALLEAgAEDGTWLAWALVA-GGVVTSLLTLY 424
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
92-449 |
1.68e-15 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 78.45 E-value: 1.68e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 92 YISLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITrWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTL 171
Cdd:PRK12663 110 FPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 172 SMLVLQysqpLQLSSWGH----MIWWAGCLIAFLVKMPLYGVHlWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVML 247
Cdd:PRK12663 189 NMAHIA----MRLNDMGDtatlTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLL 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 248 DPLSKELAYPFIILALWGIIMTGSI-CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCL 326
Cdd:PRK12663 264 FPQERELLHPLLATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLI 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 327 ANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSPWTVLLTGLGTLITAGYSLY 406
Cdd:PRK12663 344 AGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLF 423
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1137303815 407 -MFLMSQRGQVPNHITGLQPFHTREHLLMTLHLIPVILLVTKPE 449
Cdd:PRK12663 424 rIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILAVVVIAMGIAAE 467
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
210-398 |
3.30e-13 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 71.87 E-value: 3.30e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 210 HLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRMmvmlDPLSKELAYPFIILALWG---IIMTGSICLRQTDLKSLIAY 285
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARL----NPVLGGTPLWQTILPLFGgltMLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 286 SSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLA 365
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
170 180 190
....*....|....*....|....*....|...
gi 1137303815 366 LPPLPNLMGELTIITTLFNWSPWTVLLTGLGTL 398
Cdd:PRK12647 370 LPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
197-403 |
7.30e-13 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 70.18 E-value: 7.30e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 197 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLS--KELAYPFIILALWGIIMTGSICL 274
Cdd:PRK08377 213 IFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAELSAL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 275 RQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQVIFPLTAT 354
Cdd:PRK08377 293 RQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTAL 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1137303815 355 WWFLANLANLALPPLPNLMGELTIITTLFNWS-PWTVLLTGLGTLITAGY 403
Cdd:PRK08377 373 ALTIGALSTVGIPLFNVFWSKFRIILAGLSAGyTWPVALVLGASVVEAVY 422
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
109-405 |
1.50e-12 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 70.07 E-value: 1.50e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 109 ATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTyfLFYTLAGSLPLLVALLLLQQSTGTLSMlvlqySQPLQLSSWG 188
Cdd:PRK12650 129 ADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQTGTTSL-----SGILHSDVWA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 189 HMIWWAGcLIAFLVKMPLYG------VHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRmmvmLDPLSKELA---YPFI 259
Cdd:PRK12650 202 EKPGLTT-VVAVLIAVAAFTksaqfpFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLR----FSPVFHDVAvwnWLLI 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 260 ILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTM 339
Cdd:PRK12650 277 IVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDI 356
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1137303815 340 ILARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLF-----NWSPWTVLLT-GLGTLITAGYSL 405
Cdd:PRK12650 357 RRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLeapggNAGVVLLLVGaALGAVFTFAYSA 428
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
167-398 |
5.47e-12 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 67.31 E-value: 5.47e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 167 STGTLSMLVLQysqplQLSSWGHMIWWAGCLIAFLVKMPLYGVHLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRMMV 245
Cdd:PRK06525 189 QTGTFALSALS-----GLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQ 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 246 MLDPLSKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQ---TPWGFSGAIILMIAHGLVSSM 322
Cdd:PRK06525 263 SMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSL 342
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1137303815 323 LFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSPWTVLLTGLGTL 398
Cdd:PRK06525 343 FFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
210-410 |
1.13e-11 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 66.71 E-value: 1.13e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 210 HLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRMMVMLDpLSKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSV 288
Cdd:COG1009 231 HFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFA-LSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTV 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 289 SHMGLVAGGILIQtpwGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPP 368
Cdd:COG1009 309 SQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPP 385
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1137303815 369 LPNLMGELTIITTLF---NWSPWTVLLTGLGTLITAGYSLYMFLM 410
Cdd:COG1009 386 FAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFL 430
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
6-456 |
2.61e-11 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 65.52 E-value: 2.61e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 6 MLFPTIWLTSPKWLWTTTTAHSLLIAFIsLTWLKWTSETGWASSNMYLAtDPLSIPLLVLTCWLLPLMILASQNHINPEP 85
Cdd:COG1007 21 LLLDLFLPRRSRRLLAGLALLGLLLALA-LLLLALGGGTGTAFGGMFVV-DGFALFFKLLILLAALLVLLLSRDYLERRG 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 86 ISRQRLYISLLASLQTFLIMAfGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGT-YFLFYTLAgSLPLLVALLLL 164
Cdd:COG1007 99 LLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALS-SGFLLYGISLL 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 165 QQSTGTLSMLVLqySQPLQLSSWGHMIWWAGC---LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLlKLGGYGM- 240
Cdd:COG1007 177 YGATGSLNLAGI--AAALAAGGANSPLLLLGLvlvLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAl 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 241 MRMMVM-LDPLSKELAYPFIILALwgIIMT-GSIC-LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHG 317
Cdd:COG1007 254 LRLLVEaFPGLAADWQLLLAVLAV--LSMTvGNLAaLAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYL 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 318 LVSSMLF-CLANTAYERTHSRTMILARGLQVIFPLTAtWWFLANLANLA-LPPLPNLMGELTIITTLFNWSPWTVLLTG- 394
Cdd:COG1007 332 FMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLA-LAMTIFLLSLAgIPPTAGFFGKFYVFSAAVEAGLYWLAVIAv 410
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1137303815 395 LGTLITAGYSL----YMFLMSQRGQVPNHITGLQpfhtreHLLMTLHLIPVILLVTKPELMWGWCY 456
Cdd:COG1007 411 LNSVISAYYYLrvvkAMYFDEPEEEAPISAPPGL------RVALVIAALLVLLLGIFPGPLLDLAA 470
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
82-410 |
5.16e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 64.45 E-value: 5.16e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 82 NPEPISRQRLYISLLASLQTFLIMAfgaTEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVAL 161
Cdd:PRK06589 111 NIDSSSRFLFFFNLTILIGVLIALS---SDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAV 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 162 LLLQQSTGTLSMlvlqysQPLQLSSWGHMIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMM 241
Cdd:PRK06589 188 ILIYTKTGNLDF------VSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIY 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 242 RMMVMLDPLSKELAY-----PFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAH 316
Cdd:PRK06589 262 KILLYIFGLSYLQRIfaefnWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSH 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 317 GLVSSMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFN----WSPWTVLL 392
Cdd:PRK06589 342 SFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEqnqpWLSIIVML 421
|
330
....*....|....*...
gi 1137303815 393 TGLGTLITAgySLYMFLM 410
Cdd:PRK06589 422 VVIASSILS--ALYLLKI 437
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
197-398 |
1.47e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 63.04 E-value: 1.47e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 197 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPFI-ILALWGIIMtGSI-CL 274
Cdd:PRK07691 216 LFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLIlILALLTIIF-GVIgAV 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 275 RQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQVIFPLTAT 354
Cdd:PRK07691 295 AYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGW 374
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1137303815 355 WWFLANLANLALPPLPNLMGELTIITTLFN----WSPWTVLLTGLGTL 398
Cdd:PRK07691 375 MFFIAALSLAGIPPLSGFYGKFFIVEGTFEagfyVSGIIVLLSSLLVL 422
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
115-400 |
1.48e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 63.19 E-value: 1.48e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 115 FYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQYSQPLQLSSWGhMIWWA 194
Cdd:PRK08376 146 FFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVA-KIALA 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 195 GCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLaaVLLKLGG-YGMMRMMVMLDPLS---KELAYPFIILALWGIIMTG 270
Cdd:PRK08376 225 LFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAinlATVGWVIIILGCLTMFVGV 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 271 SICLRQTDLKSLIAYSSVSHMG---------LVAGGILIQTPWGF---SGAIILMIAHGLVSSMLFCLANTAYERTHSRT 338
Cdd:PRK08376 303 AMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEialAGGIYHIVNHALYKALLFLTAGAVIYETGTRN 382
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1137303815 339 MILARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSPWTVLLTGLGTLIT 400
Cdd:PRK08376 383 LNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLT 444
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
166-405 |
6.07e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 61.38 E-value: 6.07e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 166 QSTGTLSMLVLqySQPLQLSSWGHMIWWAGcLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMV 245
Cdd:PRK08042 159 QRYGTLDLRLL--DMRMQQLPLGSDIWLLG-VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSL 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 246 MLDPLSKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLV-----AG--GILIQTP----WGFSGAIILMI 314
Cdd:PRK08042 236 LGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgAGvtGIALEQPaliaLGLVGGLYHLL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 315 AHGLVSSMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSPWTVLLTG 394
Cdd:PRK08042 316 NHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVAR 395
|
250
....*....|..
gi 1137303815 395 -LGTLITAGYSL 405
Cdd:PRK08042 396 lLGPLLAVGLAI 407
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
204-369 |
1.31e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 60.29 E-value: 1.31e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 204 MPLygvHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRmmVMLDPL-SKELAYPFIILALWGIIMTGSI--CLRQTDLK 280
Cdd:PRK06521 227 VPL---HVWLPRAHPAAPSHVSALMSGVMLKVAIYGILR--VVFDLLgAPGWWWGVLVLALGAISAVLGVlyALAEHDLK 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 281 SLIAYSSVSHMGLV-----------AGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQVIF 349
Cdd:PRK06521 302 RLLAYSTIENIGIIfvglglamvfiAYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRM 381
|
170 180
....*....|....*....|
gi 1137303815 350 PLTATWWFLANLANLALPPL 369
Cdd:PRK06521 382 PWTAWAFLIGCLAISALPPL 401
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
90-407 |
7.38e-09 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 58.23 E-value: 7.38e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 90 RLYISLLASLQTFLIMAFGATEIIMfYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTG 169
Cdd:PRK12646 111 RFYFYLTLFMFSMIGIVLSDNTILM-YVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTG 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 170 TLSMLVLqYSQPLQLSSWGHMIWWAGC-LIAFLVKMPLYGVHLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRMMVML 247
Cdd:PRK12646 190 TNNITEI-LGQADHIKNHGLFIPMIFMfLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLL 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 248 DpLSKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVA-----GGILIQTPWG----------FSGAIIL 312
Cdd:PRK12646 268 G-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMamvgiGGGYAQHQQDaiasiyvfvlFAALFHL 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 313 MiAHGLVSSMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSP----- 387
Cdd:PRK12646 347 M-NHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQlsqfs 425
|
330 340
....*....|....*....|....*
gi 1137303815 388 --WTVLLTGLG---TLITAGYSLYM 407
Cdd:PRK12646 426 liSMIIIVFIGviaSIFTFTYALYM 450
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
197-327 |
2.58e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 55.90 E-value: 2.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 197 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMM-----VMLDPLSKELAYPFIILALWGIIMTGS 271
Cdd:PRK12662 216 MVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkANFVFTTLPFNNVFMILAALAIVFGSV 295
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1137303815 272 ICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLA 327
Cdd:PRK12662 296 LAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVS 351
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
52-341 |
4.81e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 54.93 E-value: 4.81e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 52 YLATDPLSIPLLVLTCWLLPLMIlasqnhinpepISRQRLYISLLaslqtFLIMAFGATEIIMFYIMFEATLIPTLIIIT 131
Cdd:MTH00062 49 YLILLVLFLGLYSQVMFYNLLSG-----------VSRFFLFLSLI-----FSILCFCVNNSLLFWFFYELSIIPLLYLLF 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 132 RWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQYSqplqlSSWGHMIWWAGCLIaFLVKMPLYGVHL 211
Cdd:MTH00062 113 SESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSD-----DSVSLIVYYVLSFM-FITKVPLFPFHT 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 212 WLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPFIILALWGIIMTGSICLrqtDLKSLIAYSSVSHM 291
Cdd:MTH00062 187 WLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVFFLITACSEL---DGKRWLAFLSLSHI 263
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1137303815 292 GLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMIL 341
Cdd:MTH00062 264 LVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVL 313
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
183-410 |
1.06e-07 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 54.26 E-value: 1.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 183 QLSSWGHMIWWAGCLIAFLVKM---------PLygvHLWLPKAhVEAPV-------AGSMVLAAVLLklggygMMRMmvm 246
Cdd:PRK07376 214 ELVSSGAVSGWLALLLCILVFLgpmaksaqfPL---HVWLPDA-MEGPTpisalihAATMVAAGVFL------VARM--- 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 247 lDPLSKELAYPFIILALWGII---MTGSICLRQTDLKSLIAYSSVSHMG--LVAGGIliqtpWGFSGAIILMIAHGLVSS 321
Cdd:PRK07376 281 -YPVFEQFPAVMTVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGymVMAMGC-----GAYSAGLFHLMTHAYFKA 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 322 MLFCLANT---------AYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSPwtvLL 392
Cdd:PRK07376 355 MLFLGSGSvihgmeevvGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANP---AL 431
|
250
....*....|....*....
gi 1137303815 393 TGLGTLiTAGYS-LYMFLM 410
Cdd:PRK07376 432 WFVGFL-TAGMTaFYMFRM 449
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
90-369 |
2.23e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 53.29 E-value: 2.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 90 RLYISLLASLQTFLIMAFGATEIIMFyIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTG 169
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 170 TLSMLVLQYSQPLQLSSWGHMIWWAGCLIAFL------VKMPLYgvhLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMR 242
Cdd:PRK12649 191 TYDIATILQDSELIENIKGHPLFLITLILIFIgaaaksAQGPFY---IWLPNA-MEAPTPVSAFLhSATMVKAGVYLVAR 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 243 MmvmlDPLSKELAYPFIILALWGII---MTGSICLRQTDLKSLIAYSSVS---HMGLVAGGILIQTP-WGFSGAIILMIA 315
Cdd:PRK12649 267 I----HPIFSGTEAWFILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISqlaYLMTMYGYTTYHEPgLGVAAATFHLLN 342
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1137303815 316 HGLVSSMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPL 369
Cdd:PRK12649 343 HATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPL 396
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
259-368 |
4.98e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 51.96 E-value: 4.98e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 259 IILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRT 338
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110
....*....|....*....|....*....|
gi 1137303815 339 MILARGLQVIFPLTATWWFLANLANLALPP 368
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
20-320 |
8.99e-07 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 50.97 E-value: 8.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 20 WTTTTAHSLLIAFISLTWLKWTSETGWASSNMYLATDP---LSIPLLVLTCWLLPLMILASQNHINPEpisrqrLYISLL 96
Cdd:PRK05777 37 RATLAVLALLLALVALLFVLGAAGGGTAFGGMLVVDGFalfLKGLILLASLLALLLARPYLEDRGRGE------FYLLVL 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 97 ASLQTFLIMAFgATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAG-TYFLFYTLAgSLPLLVALLLLQQSTGTLSMLV 175
Cdd:PRK05777 111 FALLGMMVMVS-ANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAiKYFVLGALA-SGFLLYGMSLLYGATGSLSFAG 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 176 LQYSqpLQLSSWGHMIWWAGC---LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLlKLGGYGM-MRMMVM-LDPL 250
Cdd:PRK05777 189 IAKA--LADGSGNSLLLLFGLvflLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLLVVaFGGL 265
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 251 SKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVS 320
Cdd:PRK05777 266 SEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
16-452 |
1.33e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 50.33 E-value: 1.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 16 PKWLWTTTTAHSLLIAFISL-TWLKWTSETGWASSNMYLATDPLSIPLLVLTCWLLplMILASQNHINPEPISRQRLYIS 94
Cdd:TIGR01770 30 NPLLLKNLSYIVLLSALVSLfLTLQYAAYLFTGFSFFIVDNFALLIKLILLLSTLL--TFFFALSYLSKEKINKFEFYIL 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 95 LLASLQTFLIMAFgATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSML 174
Cdd:TIGR01770 108 LLFALLGIFLLVS-SNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFE 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 175 VL-QYSQPLQLSSWGHMIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMV-MLDPLSK 252
Cdd:TIGR01770 187 DLlLFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLyILFGFSE 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 253 ELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLF-CLANT-A 330
Cdd:TIGR01770 267 AWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgVLSLLrS 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 331 YERTHSRTMILARGLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFNWSPWT-VLLTGLGTLITAGYSL---- 405
Cdd:TIGR01770 347 YKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWlAVIAVLTSVIGAFYYLrvvk 426
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1137303815 406 YMFLmsqrgQVPNHITGLQPFHTREHLLMTLHLIPVILLVTKPELMW 452
Cdd:TIGR01770 427 VMYF-----DKPERRIPSNPQSKAQSLLLSISALFILFLGLFPSLIL 468
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
134-399 |
1.46e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 50.62 E-value: 1.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 134 GNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQYSQPlQLSSWGHMIWWAGC---LIAFLVKMPLYGVH 210
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIA-QLPAADRALLEAGAallLVVFLIKAAMWPLN 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 211 LWLPKAHVEA--PVAGsmvLAAVLLKLGGYGMMRM-MVMLDPLSKELAYPFIILALWGIIMT---GSI-CLRQTDLKSLI 283
Cdd:PRK12666 231 FWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLsTLLFGPEAGASAGFGQDWLLPGGLATlafGAIgVLAAQRLRRLA 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 284 AYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLAN-----------------TAYERTHSRTMILARGLQ 346
Cdd:PRK12666 308 AYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADlverqrgaaadrlavtpELYDLDEEEEEEVGVAIP 387
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1137303815 347 VIFPLTATWWFLANLANLALPPLPNLMGELTIITTLFN----WSPW----TVLLTGLGTLI 399
Cdd:PRK12666 388 ATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLNppgaGAAWwlwaLVLLSGLAALI 448
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
197-406 |
4.05e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 49.54 E-value: 4.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 197 LIAFLVKMPLYGVHLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRMMvmldPLSKELA---YPFIILALWGIIMTGSI 272
Cdd:PRK12644 210 LVGALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLA----PGFADVPvwrPTVLVLGLATMLLGGWR 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 273 CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQVIFPLT 352
Cdd:PRK12644 285 ALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVL 364
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 353 ATWWFLANLANLALPPLPNLMGELTIITTLFN------WSPWTVLLTGLGTLITAGYSLY 406
Cdd:PRK12644 365 AVVAALAAASMAGLPPLLGFVAKEAALEAVLHdgalgpAGPVVLAGIVLGSILTVAYSLR 424
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
53-369 |
2.73e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 46.49 E-value: 2.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 53 LATDPLSIPLLVLTCWLLPLMILASQNHINPEP-ISRQRLYISLLaslqTFLIMAFGATE-IIMFYIMFEATLIPTLIII 130
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYLSLF----TFLMMVLVTSDnYLQLFIGWEGVGVCSYLLV 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 131 TRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQ-------------YSQPLQLSSWGHmiwWAGCL 197
Cdd:MTH00032 152 AFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsvgsgimdrgyYGGGAYESPLAP---FAIIG 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 198 IAFLV----KMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMvmldPLSKELAYPFIILALWGII---MTG 270
Cdd:MTH00032 229 ILLLIgcigKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 271 SICLRQTDLKSLIAYSSVSHMGLVAggILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTH--SRTMILARGLQVI 348
Cdd:MTH00032 305 TVGLVQNDLKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvdEQDMRKMGGLIHS 382
|
330 340
....*....|....*....|.
gi 1137303815 349 FPLTATWWFLANLANLALPPL 369
Cdd:MTH00032 383 IPFTYTMMLIGSFSIMGLPYL 403
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
187-411 |
8.65e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 44.49 E-value: 8.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 187 WGHMIWWAGCLI--AFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLlKLGgygMMRMMVMLDPLSkELAYPFIILALW 264
Cdd:MTH00144 79 NLSFSWFSMSLLllGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVA---PLFLLSNFLDLY-WLAYLLCVISVL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 265 GIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILiqtpWGFSGAIILMIAHGLVSSMLFCLANtaYERTHSRTMILARG 344
Cdd:MTH00144 154 SALVGSIGGLNQTQVRALLAYSSISHTGWMLVAIL----HGSWLMWMYFLIYIVSSGFLFFSLW--SGDSGSMKDLGSLK 227
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1137303815 345 LQVIFPLTATWWFLAnLAnlALPPLPNLMGELTIITTLFNWSPWTVLLTG-LGTLITAGYSLYMFLMS 411
Cdd:MTH00144 228 PSYKTGLSIISLLLS-LG--GLPPFLGFCSKLLVLISSMESSPLLLILLLlLGSLISLFFYLSVFFSS 292
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
168-380 |
2.30e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 43.63 E-value: 2.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 168 TGTLSMLVLQYSQPLQLSSWGhmiwwagcliaFLVKMPLYGVHL--WLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRmMV 245
Cdd:PRK06459 147 SGTTNFSYLPSPVPLILASFG-----------FIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILK-MT 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 246 MLDPLSKELAYPFIILALWGI-IMTGSICLRQTD-LKSLIAYSSVSHMG--LVAGGILIQTPWGFS--------GAIILM 313
Cdd:PRK06459 215 ILTQTIPIGYFGLTILAIGAFsILFGALYAYVSEnVKGLLAFSTIENNGaiLVALGLYMVTKQLITsiehfsliTVILYS 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 314 IAHGLVSSMLFCLANTAYERTHSR------------TMILARGLQVIFPL---TATWWFLANLANLALpPLPNLMGELTI 378
Cdd:PRK06459 295 FAHSVAKTGLFLSSGLQEKQSITYskkirnrwielgLTLLASSLSGLLPNiggVASWLLLESLFMFAY-VLHNVISILFI 373
|
..
gi 1137303815 379 IT 380
Cdd:PRK06459 374 VT 375
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
210-392 |
3.23e-04 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 42.97 E-value: 3.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 210 HLWLPKAhVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDpLSkelayPFIILALWGI-----IMTGSICLRQTDLKSLIA 284
Cdd:PRK07390 241 HLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQPVLA-LS-----PVALTVLIVIgtvtaIGASLVAIAQIDIKRALS 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 285 YSSVSHMGLVAGGILIQTPwgfSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQVIFPLTATWWFLANLANL 364
Cdd:PRK07390 314 YSTSAYLGLVFIAVGLQQP---DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLV 390
|
170 180
....*....|....*....|....*...
gi 1137303815 365 ALPPLPNLMGELTIITTLFNWSPWTVLL 392
Cdd:PRK07390 391 ALLPLGGFWALLRLADGLWAVSPWLVGV 418
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
276-405 |
1.96e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 40.56 E-value: 1.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 276 QTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQVIFPLTATw 355
Cdd:PRK12648 292 QHDLKGLLAYSTISHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLRRLMPITAT- 370
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1137303815 356 wfLANLANLALPPLPNLMGEL--------TIITTLFNWSPWTV-LLTGLGTLITAGYSL 405
Cdd:PRK12648 371 --LAMVAAAAMAGVPLLNGFLskemffaeTLDTHLLGSLDWLLpVAATLAGAFSVAYSL 427
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
208-405 |
3.33e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 39.68 E-value: 3.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 208 GVHLWLPKAhVEAPV-------AGSMVLAAVLLklggygMMRMMVMLDPLSKELAYPFIILALwGIIMTGSICLRQTDLK 280
Cdd:MTH00020 228 GLHTWLPDA-MEGPTpvsalihAATMVTAGVFL------LIRSSPLFEQAPLALIIVTIVGSL-TVFFAATVGLVQNDLK 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 281 SLIAYSSVSHMG--LVAGGIliqtpWGFSGAIILMIAHGLVSSMLFCLANTA-YERTHSRTMILARGLQVIFPLTATWWF 357
Cdd:MTH00020 300 KVIAYSTCSQLGymVVACGL-----SHYSISLFHLMNHAFFKALLFLSAGSViHALSDEQDMRKMGGLISFLPLTYIFFL 374
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1137303815 358 LANLANLALPPLPNLMGELTIITTLF--NWSPWTVLLTGLGTLITAGYSL 405
Cdd:MTH00020 375 IGSLSLMGFPYLTGFYSKDLILELAFgqYYLIFAYWLGCFSALLTAFYSI 424
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
108-324 |
6.37e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 38.47 E-value: 6.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 108 GATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAG-TYFLFYTLAgSLPLLVALLLLQQSTGTLSMLVLQYSQPLQLSS 186
Cdd:MTH00196 11 SSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGlKYFVLGALS-SGLFLFGCALLCGTTGGLHLSYINLVLNSGQSF 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 187 WGHMIWWAGCLI--AFLVKMPLYGVHLWLPKAHVEAPVagsmVLAAVLLKLGGYGMMRMMVMLDPLskelAYPFIILALW 264
Cdd:MTH00196 90 SSVSVPIGYLLIivALLFKLSVAPFHMWAPDVYEGAPT----KTTALLAIVPKLGIFSILVSIGLN----VNILLIGGLF 161
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 265 GIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLF 324
Cdd:MTH00196 162 SLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
195-411 |
7.20e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 38.78 E-value: 7.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 195 GCLIAFLVKMPLYGVHLWLPKAhVEAPVAGS-------MVLAAVLLklggygMMRMMVMLDPLSKELAYPFIILALwGII 267
Cdd:MTH00211 209 GLLLAAMGKSAQFGFHPWLPSA-MEGPTPVSallhsstMVVAGVFL------LIRLSPLFQNNQLILGAVLLLGAL-TML 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 268 MTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPwgfSGAIILMIAHGLVSSMLF----CLANTAYERTHSRTMilaR 343
Cdd:MTH00211 281 FGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQP---QLAFLHICTHAFFKAMLFmcsgSIIHGLNNEQDIRKM---G 354
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1137303815 344 GLQVIFPLTATWWFLANLANLALPPLPNLMGELTIITTLF--NWSPWTVLLTGLGTLITAGYSLYMFLMS 411
Cdd:MTH00211 355 GLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNgsYLNAWALLLTLLATSLTAAYSFRLIFLS 424
|
|
| |
