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Conserved domains on  [gi|1131356538|gb|APU68274|]
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hypothetical protein GRFL_1550 [Gramella flava JLT2011]

Protein Classification

arsenate reductase family protein( domain architecture ID 10003639)

arsenate reductase family protein belongs to the thioredoxin fold superfamily, and may catalyze the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ArsC COG1393
Arsenate reductase or related protein, glutaredoxin family [Inorganic ion transport and ...
 22-129 3.26e-31

Arsenate reductase or related protein, glutaredoxin family [Inorganic ion transport and metabolism];


:

Pssm-ID: 441003  Cd Length: 115  Bit Score: 107.49  E-value: 3.26e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1131356538  22 IFYLSTCDTCKRILKDIEAP-ADFILQDIKKDPITAEQLEKMKDLSG-SYEALFSRRARLYKERNLKDQQLKEEDYKKLI 99
Cdd:COG1393     4 IYGNPNCSTSRKALAWLEEAgIEYEFIDYLKTPPTAEELKELLAKLGlGVEELLNTRGTTYRELGLKDKALSEEEALALM 83

                          90       100       110
                  ....*....|....*....|....*....|
gi 1131356538 100 LEHYTFLKRPVIINDQKIFIGNTAKTTQEA 129
Cdd:COG1393    84 LEHPSLIKRPIVVTGDKALVGFPPEEVLAL 113
 
Name Accession Description Interval E-value
ArsC COG1393
Arsenate reductase or related protein, glutaredoxin family [Inorganic ion transport and ...
 22-129 3.26e-31

Arsenate reductase or related protein, glutaredoxin family [Inorganic ion transport and metabolism];


Pssm-ID: 441003  Cd Length: 115  Bit Score: 107.49  E-value: 3.26e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1131356538  22 IFYLSTCDTCKRILKDIEAP-ADFILQDIKKDPITAEQLEKMKDLSG-SYEALFSRRARLYKERNLKDQQLKEEDYKKLI 99
Cdd:COG1393     4 IYGNPNCSTSRKALAWLEEAgIEYEFIDYLKTPPTAEELKELLAKLGlGVEELLNTRGTTYRELGLKDKALSEEEALALM 83

                          90       100       110
                  ....*....|....*....|....*....|
gi 1131356538 100 LEHYTFLKRPVIINDQKIFIGNTAKTTQEA 129
Cdd:COG1393    84 LEHPSLIKRPIVVTGDKALVGFPPEEVLAL 113
ArsC_family cd02977
Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins ...
 22-120 2.14e-16

Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.


Pssm-ID: 239275  Cd Length: 105  Bit Score: 69.44  E-value: 2.14e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1131356538  22 IFYLSTCDTCKRILKDIEAP-ADFILQDIKKDPITAEQLEKM-KDLSGSYEALFSRRARLYKERNLKD-QQLKEEDYKKL 98
Cdd:cd02977     3 IYGNPNCSTSRKALAWLEEHgIEYEFIDYLKEPPTKEELKELlAKLGLGVEDLFNTRGTPYRKLGLADkDELSDEEALEL 82

                          90       100
                  ....*....|....*....|..
gi 1131356538  99 ILEHYTFLKRPVIINDQKIFIG 120
Cdd:cd02977    83 MAEHPKLIKRPIVVDGDRLLVG 104
ArsC pfam03960
ArsC family; This family is related to glutaredoxins pfam00462.
 23-120 3.70e-14

ArsC family; This family is related to glutaredoxins pfam00462.


Pssm-ID: 427617  Cd Length: 109  Bit Score: 63.77  E-value: 3.70e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1131356538  23 FYLSTCDTCKRILKDIEA---PADFIlqDIKKDPITAEQLEKMKDLSG-SYEALFSRRARLYKERNLKDQQLKEEDYKKL 98
Cdd:pfam03960   1 YGSPNCSTCRKALAWLEEhgiEYQEI--DYLETPPSKEELKDILAKLGdGVEALLNTRGTTYRELNLDKEDLSEDELLEL 78

                          90       100
                  ....*....|....*....|..
gi 1131356538  99 ILEHYTFLKRPVIINDQKIFIG 120
Cdd:pfam03960  79 ILEHPSLIRRPIVVDGGKLLVG 100
arsC_related TIGR01617
transcriptional regulator, Spx/MgsR family; This model represents a portion of the proteins ...
 22-117 1.40e-06

transcriptional regulator, Spx/MgsR family; This model represents a portion of the proteins within the larger set covered by pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B. [Regulatory functions, DNA interactions]


Pssm-ID: 273720  Cd Length: 117  Bit Score: 44.34  E-value: 1.40e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1131356538  22 IFYLSTCDTCKRILKDIEAPA-DFILQDIKKDPITAEQLEKMKDLSG-SYEALFSRRARLYKERNLKD--QQLKEEDYKK 97
Cdd:TIGR01617   3 VYGSPNCTTCKKARRWLEANGiEYQFIDIGEDGPTREELLDILSLLEdGIDPLLNTRGQSYRALNTSNtfLDLSDKEALE 82

                          90       100
                  ....*....|....*....|
gi 1131356538  98 LILEHYTFLKRPVIINDQKI 117
Cdd:TIGR01617  83 LLAEDPALLRRPLIVDTKNR 102
PRK12559 PRK12559
transcriptional regulator Spx; Provisional
 19-120 1.20e-05

transcriptional regulator Spx; Provisional


Pssm-ID: 79035  Cd Length: 131  Bit Score: 42.01  E-value: 1.20e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1131356538  19 MQHIFYLSTCDTCKRILKDIEA-PADFILQDIKKDPITAEQLEKMKDLS--GSYEaLFSRRARLYKERNLKDQQLKEEDY 95
Cdd:PRK12559    1 MVVLYTTASCASCRKAKAWLEEnQIDYTEKNIVSNSMTVDELKSILRLTeeGATE-IISTRSKTFQDLNINIEELSLNEF 79

                          90       100
                  ....*....|....*....|....*
gi 1131356538  96 KKLILEHYTFLKRPVIINDQKIFIG 120
Cdd:PRK12559   80 YKLIIEHPLMLRRPIMLDEKRLQIG 104
 
Name Accession Description Interval E-value
ArsC COG1393
Arsenate reductase or related protein, glutaredoxin family [Inorganic ion transport and ...
 22-129 3.26e-31

Arsenate reductase or related protein, glutaredoxin family [Inorganic ion transport and metabolism];


Pssm-ID: 441003  Cd Length: 115  Bit Score: 107.49  E-value: 3.26e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1131356538  22 IFYLSTCDTCKRILKDIEAP-ADFILQDIKKDPITAEQLEKMKDLSG-SYEALFSRRARLYKERNLKDQQLKEEDYKKLI 99
Cdd:COG1393     4 IYGNPNCSTSRKALAWLEEAgIEYEFIDYLKTPPTAEELKELLAKLGlGVEELLNTRGTTYRELGLKDKALSEEEALALM 83

                          90       100       110
                  ....*....|....*....|....*....|
gi 1131356538 100 LEHYTFLKRPVIINDQKIFIGNTAKTTQEA 129
Cdd:COG1393    84 LEHPSLIKRPIVVTGDKALVGFPPEEVLAL 113
ArsC_family cd02977
Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins ...
 22-120 2.14e-16

Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.


Pssm-ID: 239275  Cd Length: 105  Bit Score: 69.44  E-value: 2.14e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1131356538  22 IFYLSTCDTCKRILKDIEAP-ADFILQDIKKDPITAEQLEKM-KDLSGSYEALFSRRARLYKERNLKD-QQLKEEDYKKL 98
Cdd:cd02977     3 IYGNPNCSTSRKALAWLEEHgIEYEFIDYLKEPPTKEELKELlAKLGLGVEDLFNTRGTPYRKLGLADkDELSDEEALEL 82

                          90       100
                  ....*....|....*....|..
gi 1131356538  99 ILEHYTFLKRPVIINDQKIFIG 120
Cdd:cd02977    83 MAEHPKLIKRPIVVDGDRLLVG 104
ArsC pfam03960
ArsC family; This family is related to glutaredoxins pfam00462.
 23-120 3.70e-14

ArsC family; This family is related to glutaredoxins pfam00462.


Pssm-ID: 427617  Cd Length: 109  Bit Score: 63.77  E-value: 3.70e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1131356538  23 FYLSTCDTCKRILKDIEA---PADFIlqDIKKDPITAEQLEKMKDLSG-SYEALFSRRARLYKERNLKDQQLKEEDYKKL 98
Cdd:pfam03960   1 YGSPNCSTCRKALAWLEEhgiEYQEI--DYLETPPSKEELKDILAKLGdGVEALLNTRGTTYRELNLDKEDLSEDELLEL 78

                          90       100
                  ....*....|....*....|..
gi 1131356538  99 ILEHYTFLKRPVIINDQKIFIG 120
Cdd:pfam03960  79 ILEHPSLIRRPIVVDGGKLLVG 100
ArsC_Yffb cd03035
Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein ...
 27-120 5.94e-12

Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.


Pssm-ID: 239333  Cd Length: 105  Bit Score: 57.99  E-value: 5.94e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1131356538  27 TCDTCKRILKDIEA---PADFIlqDIKKDPITAEQLEKMKDLSGsYEALFSRRARLYkeRNLKDQQ---LKEEDYKKLIL 100
Cdd:cd03035     8 NCDTVKKARKWLEArgvAYTFH--DYRKDGLDAATLERWLAKVG-WETLLNKRGTTW--RKLDDAQkaaLDAAKAIALML 82

                          90       100
                  ....*....|....*....|
gi 1131356538 101 EHYTFLKRPVIINDQKIFIG 120
Cdd:cd03035    83 EHPSLIKRPVLETGGKVLVG 102
ArsC_Spx cd03032
Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding ...
 19-120 4.91e-09

Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.


Pssm-ID: 239330  Cd Length: 115  Bit Score: 50.70  E-value: 4.91e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1131356538  19 MQHIFYLSTCDTC---KRILKDIEAPadFILQDIKKDPITAEQLEKMKDLS-GSYEALFSRRARLYKERNLKDQQLKEED 94
Cdd:cd03032     1 MIKLYTSPSCSSCrkaKQWLEEHQIP--FEERNLFKQPLTKEELKEILSLTeNGVEDIISTRSKAFKNLNIDIDELSLSE 78

                          90       100
                  ....*....|....*....|....*.
gi 1131356538  95 YKKLILEHYTFLKRPVIINDQKIFIG 120
Cdd:cd03032    79 LIRLISEHPSLLRRPIIIDEKRLQIG 104
ArsC_like cd03036
Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a ...
 22-120 1.73e-08

Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.


Pssm-ID: 239334  Cd Length: 111  Bit Score: 49.16  E-value: 1.73e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1131356538  22 IFYLSTCDTCKRILKDI-EAPADFILQDIKKDPITAEQLEKMKDLSG-SYEALFSRRARLYKERNLKDQ--QLKEEDYKK 97
Cdd:cd03036     3 FYEYPKCSTCRKAKKWLdEHGVDYTAIDIVEEPPSKEELKKWLEKSGlPLKKFFNTSGKSYRELGLKDKlpSLSEEEALE 82

                          90       100
                  ....*....|....*....|...
gi 1131356538  98 LILEHYTFLKRPVIINDQKIFIG 120
Cdd:cd03036    83 LLSSDGMLIKRPFVVDDDKVLVG 105
arsC_related TIGR01617
transcriptional regulator, Spx/MgsR family; This model represents a portion of the proteins ...
 22-117 1.40e-06

transcriptional regulator, Spx/MgsR family; This model represents a portion of the proteins within the larger set covered by pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B. [Regulatory functions, DNA interactions]


Pssm-ID: 273720  Cd Length: 117  Bit Score: 44.34  E-value: 1.40e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1131356538  22 IFYLSTCDTCKRILKDIEAPA-DFILQDIKKDPITAEQLEKMKDLSG-SYEALFSRRARLYKERNLKD--QQLKEEDYKK 97
Cdd:TIGR01617   3 VYGSPNCTTCKKARRWLEANGiEYQFIDIGEDGPTREELLDILSLLEdGIDPLLNTRGQSYRALNTSNtfLDLSDKEALE 82

                          90       100
                  ....*....|....*....|
gi 1131356538  98 LILEHYTFLKRPVIINDQKI 117
Cdd:TIGR01617  83 LLAEDPALLRRPLIVDTKNR 102
ArsC_ArsC cd03034
Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded ...
 51-128 5.81e-06

Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.


Pssm-ID: 239332  Cd Length: 112  Bit Score: 42.19  E-value: 5.81e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1131356538  51 KDPITAEQLEKM-KDLSGSYEALFSRRARLYKERNLKDQQLKEEDYKKLILEHYTFLKRPVIINDQKIFIGNTAKTTQE 128
Cdd:cd03034    33 KTPPTAAELRELlAKLGISPRDLLRTKEAPYKELGLADPELSDEELIDAMAAHPILIERPIVVTGDGAVLGRPPEAVLE 111
PRK12559 PRK12559
transcriptional regulator Spx; Provisional
 19-120 1.20e-05

transcriptional regulator Spx; Provisional


Pssm-ID: 79035  Cd Length: 131  Bit Score: 42.01  E-value: 1.20e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1131356538  19 MQHIFYLSTCDTCKRILKDIEA-PADFILQDIKKDPITAEQLEKMKDLS--GSYEaLFSRRARLYKERNLKDQQLKEEDY 95
Cdd:PRK12559    1 MVVLYTTASCASCRKAKAWLEEnQIDYTEKNIVSNSMTVDELKSILRLTeeGATE-IISTRSKTFQDLNINIEELSLNEF 79

                          90       100
                  ....*....|....*....|....*
gi 1131356538  96 KKLILEHYTFLKRPVIINDQKIFIG 120
Cdd:PRK12559   80 YKLIIEHPLMLRRPIMLDEKRLQIG 104
spxA PRK13344
transcriptional regulator Spx; Reviewed
 19-120 1.56e-05

transcriptional regulator Spx; Reviewed


Pssm-ID: 183988  Cd Length: 132  Bit Score: 41.87  E-value: 1.56e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1131356538  19 MQHIFYLSTCDTCKRILKDIEA-PADFILQDIKKDPITAEQ-LEKMKDLSGSYEALFSRRARLYKERNLKDQQLKEEDYK 96
Cdd:PRK13344    1 MIKIYTISSCTSCKKAKTWLNAhQLSYKEQNLGKEPLTKEEiLAILTKTENGIESIVSSKNRYAKALDCDIEELSVNEVI 80

                          90       100
                  ....*....|....*....|....
gi 1131356538  97 KLILEHYTFLKRPVIINDQKIFIG 120
Cdd:PRK13344   81 DLIQENPRILKSPILIDDKRLQVG 104
arsC TIGR00014
arsenate reductase (glutaredoxin); This model describes a distinct clade, including ArsC ...
 22-120 7.61e-05

arsenate reductase (glutaredoxin); This model describes a distinct clade, including ArsC itself, of the broader ArsC family described by Pfam pfam03960. This clade is almost completely restricted to the Proteobacteria. An anion-translocating ATPase has been identified as the product of the arsenical resistance operon of resistance plasmid R773. When expressed in Escherichia coli this ATP-driven oxyanion pump catalyses extrusion of the oxyanions arsenite, antimonite and arsenate. The pump is composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate. [Cellular processes, Detoxification]


Pssm-ID: 272855  Cd Length: 114  Bit Score: 39.36  E-value: 7.61e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1131356538  22 IFYLSTCDTCKRIL-----KDIEAPADFILqdikKDPITAEQLEKMKDLSG--SYEALFSRRARLYKERNLKDQQLKEED 94
Cdd:TIGR00014   3 IYHNPRCSKSRNTLalledKGIEPEVVKYL----KNPPTKSELEAIFAKLGltVAREMIRTKEALYKELGLSDPNLSDQE 78

                          90       100
                  ....*....|....*....|....*.
gi 1131356538  95 YKKLILEHYTFLKRPVIINDQKIFIG 120
Cdd:TIGR00014  79 LLDAMVAHPILLERPIVVAGDGARIG 104
spxA PRK01655
transcriptional regulator Spx; Reviewed
 19-120 3.63e-04

transcriptional regulator Spx; Reviewed


Pssm-ID: 179316  Cd Length: 131  Bit Score: 37.74  E-value: 3.63e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1131356538  19 MQHIFYLSTCDTCKRI---LKDIEAPadFILQDIKKDPITAEQLEKMKDLSGS-YEALFSRRARLYKERNLKDQQLKEED 94
Cdd:PRK01655    1 MVTLFTSPSCTSCRKAkawLEEHDIP--FTERNIFSSPLTIDEIKQILRMTEDgTDEIISTRSKVFQKLNVDVESLSLQD 78

                          90       100
                  ....*....|....*....|....*.
gi 1131356538  95 YKKLILEHYTFLKRPVIINDQKIFIG 120
Cdd:PRK01655   79 LIKLISDNPGLLRRPIIIDEKRLQVG 104
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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