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Conserved domains on  [gi|1097203197|gb|APA36862|]
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chitin synthase, partial [Ramularia geranii]

Protein Classification

glycosyltransferase family 2 protein; glycosyltransferase family protein( domain architecture ID 10483250)

glycosyltransferase family 2 protein catalyzes the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds; glycosyltransferase family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Chitin_synth_1 pfam01644
Chitin synthase; This region is found commonly in chitin synthases classes I, II and III. ...
 1-86 1.84e-51

Chitin synthase; This region is found commonly in chitin synthases classes I, II and III. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases.


:

Pssm-ID: 426363  Cd Length: 163  Bit Score: 158.11  E-value: 1.84e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1097203197   1 KKIVVCIVSDGRAKINPRTRSVLAAMGIYQDGIAKQQVNGKDVTAHIYEYTTQMTLEIKKGIVGVKKGNTPVQILFCLKE 80
Cdd:pfam01644  38 KKVVVCIVSDGRNKINPRTLDLLAALGVYQEGIAKNDVNGKPVTAHLFEYTTQLSVDEDLKFKGNEKGIVPVQIIFCLKE 117


                  ....*.
gi 1097203197  81 KNQKKI 86
Cdd:pfam01644 118 KNAKKI 123
 
Name Accession Description Interval E-value
Chitin_synth_1 pfam01644
Chitin synthase; This region is found commonly in chitin synthases classes I, II and III. ...
 1-86 1.84e-51

Chitin synthase; This region is found commonly in chitin synthases classes I, II and III. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases.


Pssm-ID: 426363  Cd Length: 163  Bit Score: 158.11  E-value: 1.84e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1097203197   1 KKIVVCIVSDGRAKINPRTRSVLAAMGIYQDGIAKQQVNGKDVTAHIYEYTTQMTLEIKKGIVGVKKGNTPVQILFCLKE 80
Cdd:pfam01644  38 KKVVVCIVSDGRNKINPRTLDLLAALGVYQEGIAKNDVNGKPVTAHLFEYTTQLSVDEDLKFKGNEKGIVPVQIIFCLKE 117


                  ....*.
gi 1097203197  81 KNQKKI 86
Cdd:pfam01644 118 KNAKKI 123
 
Name Accession Description Interval E-value
Chitin_synth_1 pfam01644
Chitin synthase; This region is found commonly in chitin synthases classes I, II and III. ...
 1-86 1.84e-51

Chitin synthase; This region is found commonly in chitin synthases classes I, II and III. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases.


Pssm-ID: 426363  Cd Length: 163  Bit Score: 158.11  E-value: 1.84e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1097203197   1 KKIVVCIVSDGRAKINPRTRSVLAAMGIYQDGIAKQQVNGKDVTAHIYEYTTQMTLEIKKGIVGVKKGNTPVQILFCLKE 80
Cdd:pfam01644  38 KKVVVCIVSDGRNKINPRTLDLLAALGVYQEGIAKNDVNGKPVTAHLFEYTTQLSVDEDLKFKGNEKGIVPVQIIFCLKE 117


                  ....*.
gi 1097203197  81 KNQKKI 86
Cdd:pfam01644 118 KNAKKI 123
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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