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Conserved domains on  [gi|1072812961|gb|AOT60380|]
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Putative oxidoreductase [Streptomyces rubrolavendulae]

Protein Classification

geranylgeranyl reductase family protein( domain architecture ID 11493467)

geranylgeranyl reductase family protein may be involved in chlorophyll and bacteriochlorophyll biosynthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 11-334 2.82e-105

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


:

Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 313.49  E-value: 2.82e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAMGIDISEEagwsRNKGLRIIGGGARLQ 90
Cdd:TIGR02032   2 DVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYKPCGGALSPRALEELDLPGELIVNL----VRGARFFSPNGDSVE 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  91 LDWPelasyPDYGLVRKRDDFDEQLARQAQKAGARL-YERCNVGEPVVEPRTGRITgvhaklgeDKTPVTFRAPLVVAAD 169
Cdd:TIGR02032  78 IPIE-----TELAYVIDRDAFDEQLAERAQEAGAELrLGTRVLDVEIHDDRVVVIV--------RGSEGTVTAKIVIGAD 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 170 GNSSRLSLAMGlHRREDRPMGVAVRTYFTTPrhDDDYLESWLELWDRRGPGPdrllPGYGWIFGMGDGTSNVGLGILnss 249
Cdd:TIGR02032 145 GSRSIVAKKLG-LKKEPREYGVAARAEVEMP--DEEVDEDFVEVYIDRGIVP----GGYGWVFPKGDGTANVGVGSR--- 214

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 250 SAFRELDWREVLKAWCASMPEdwgfTPDNMTTPIRGAALPMAFNRQPHYTRGLLLVGDAGGLVNPFNGEGIAYAMESGQL 329
Cdd:TIGR02032 215 SAEEGEDPKKYLKDFLARRPE----LKDAETVEVCGALIPIGRPDEKLVRGNVLLVGDAAGHVNPLTGEGIYYAMRSGDI 290


                  ....*
gi 1072812961 330 AADVI 334
Cdd:TIGR02032 291 AAEVV 295
 
Name Accession Description Interval E-value
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 11-334 2.82e-105

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 313.49  E-value: 2.82e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAMGIDISEEagwsRNKGLRIIGGGARLQ 90
Cdd:TIGR02032   2 DVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYKPCGGALSPRALEELDLPGELIVNL----VRGARFFSPNGDSVE 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  91 LDWPelasyPDYGLVRKRDDFDEQLARQAQKAGARL-YERCNVGEPVVEPRTGRITgvhaklgeDKTPVTFRAPLVVAAD 169
Cdd:TIGR02032  78 IPIE-----TELAYVIDRDAFDEQLAERAQEAGAELrLGTRVLDVEIHDDRVVVIV--------RGSEGTVTAKIVIGAD 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 170 GNSSRLSLAMGlHRREDRPMGVAVRTYFTTPrhDDDYLESWLELWDRRGPGPdrllPGYGWIFGMGDGTSNVGLGILnss 249
Cdd:TIGR02032 145 GSRSIVAKKLG-LKKEPREYGVAARAEVEMP--DEEVDEDFVEVYIDRGIVP----GGYGWVFPKGDGTANVGVGSR--- 214

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 250 SAFRELDWREVLKAWCASMPEdwgfTPDNMTTPIRGAALPMAFNRQPHYTRGLLLVGDAGGLVNPFNGEGIAYAMESGQL 329
Cdd:TIGR02032 215 SAEEGEDPKKYLKDFLARRPE----LKDAETVEVCGALIPIGRPDEKLVRGNVLLVGDAAGHVNPLTGEGIYYAMRSGDI 290


                  ....*
gi 1072812961 330 AADVI 334
Cdd:TIGR02032 291 AAEVV 295
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
17-359 1.30e-66

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 214.06  E-value: 1.30e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  17 AGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAMGIDiSEEAGWSRNKGLRIIGGgarlqlDWPEL 96
Cdd:COG0644     1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKICGGGLLPRALEELEPLGLD-EPLERPVRGARFYSPGG------KSVEL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  97 ASYPDYGLVRKRDDFDEQLARQAQKAGARLYERCNVGEPVVEPrtGRITgVHAKLGEdktpvTFRAPLVVAADGNSSRLS 176
Cdd:COG0644    74 PPGRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDD--GRVV-VRTGDGE-----EIRADYVVDADGARSLLA 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 177 LAMGLHRREDRP--MGVAVRTYFTTPRHDDDYLESWLELWDRRGPGpdrllpGYGWIFGMGDGTSNVGlgilnsssafre 254
Cdd:COG0644   146 RKLGLKRRSDEPqdYALAIKEHWELPPLEGVDPGAVEFFFGEGAPG------GYGWVFPLGDGRVSVG------------ 207

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 255 ldwrevlkawcasmpedwgftpdnmttpirgaaLPMAFNRQPHYTRGLLLVGDAGGLVNPFNGEGIAYAMESGQLAADVI 334
Cdd:COG0644   208 ---------------------------------IPLGGPRPRLVGDGVLLVGDAAGFVDPLTGEGIHLAMKSGRLAAEAI 254

                         330       340
                  ....*....|....*....|....*
gi 1072812961 335 VQAHARatDAQRERALHTYPQVLKD 359
Cdd:COG0644   255 AEALEG--GDFSAEALAEYERRLRE 277
PLN00093 PLN00093
geranylgeranyl diphosphate reductase; Provisional
 12-367 2.12e-16

geranylgeranyl diphosphate reductase; Provisional


Pssm-ID: 177713 [Multi-domain]  Cd Length: 450  Bit Score: 80.95  E-value: 2.12e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  12 VIVVGAGPAGSTTAYYLAKAGLDVLLLEKTaFPREKVCGdGLTPratkqLVAMG-IDISEEAGWSRNKGLRIIGGgARLQ 90
Cdd:PLN00093   42 VAVIGGGPAGACAAETLAKGGIETFLIERK-LDNAKPCG-GAIP-----LCMVGeFDLPLDIIDRKVTKMKMISP-SNVA 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  91 LDWPE-LASYPDYGLVRkRDDFDEQLARQAQKAGAR----LYERCNVGEPVVEPRTgritgVHAKLGEDK----TPVTFR 161
Cdd:PLN00093  114 VDIGKtLKPHEYIGMVR-REVLDSFLRERAQSNGATlingLFTRIDVPKDPNGPYV-----IHYTSYDSGsgagTPKTLE 187

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 162 APLVVAADGNSSRLSLAMGLHrreDRPMGVAVRTYFTTPRHDDDYLESWLELWDRRGPGPDRllpgYGWIFGMGDGTSnV 241
Cdd:PLN00093  188 VDAVIGADGANSRVAKDIDAG---DYDYAIAFQERIKIPDDKMEYYEDLAEMYVGDDVSPDF----YGWVFPKCDHVA-V 259

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 242 GLGILNSSSAFRELD--WREVLKAWCASmpedwgftpdnmTTPIRGAALPMAFNRQPHYTRG-LLLVGDAGGLVNPFNGE 318
Cdd:PLN00093  260 GTGTVVNKPAIKKYQraTRNRAKDKIAG------------GKIIRVEAHPIPEHPRPRRVRGrVALVGDAAGYVTKCSGE 327

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*....
gi 1072812961 319 GIAYAMESGQLAADVIVQAHARATDAQRERALHTYPQVLKDTYGGYYTL 367
Cdd:PLN00093  328 GIYFAAKSGRMCAEAIVEGSENGTRMVDEADLREYLRKWDKKYWPTYKV 376
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 10-324 1.57e-12

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 68.12  E-value: 1.57e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  10 ADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTA----FPRekvcGDGLTPRATKQLVAMGIDISEEAGWSRNKGLRIIGG 85
Cdd:pfam01494   2 TDVLIVGGGPAGLMLALLLARAGVRVVLVERHAttsvLPR----AHGLNQRTMELLRQAGLEDRILAEGVPHEGMGLAFY 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  86 GARLQLDWPELASYPDYGLVrKRDDFDEQLARQAQKAGARLYErcnVGEPVVEPRTGriTGVHAKL--GEDKTPVTFRAP 163
Cdd:pfam01494  78 NTRRRADLDFLTSPPRVTVY-PQTELEPILVEHAEARGAQVRF---GTEVLSLEQDG--DGVTAVVrdRRDGEEYTVRAK 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 164 LVVAADGNSSRLSLAMGLHRREDRP-----MGVAVRTYFTTPRHDDDYLESWLELWDRRG----PGPDRLLPGYGWIFGM 234
Cdd:pfam01494 152 YLVGCDGGRSPVRKTLGIEFEGFEGvpfgsLDVLFDAPDLSDPVERAFVHYLIYAPHSRGfmvgPWRSAGRERYYVQVPW 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 235 GDGTSNVGlgilnsssafRELDWREVLKAWcasmPEDWGfTPDNMTTPIRGAALPMAFNRQPHYTRG-LLLVGDAGGLVN 313
Cdd:pfam01494 232 DEEVEERP----------EEFTDEELKQRL----RSIVG-IDLALVEILWKSIWGVASRVATRYRKGrVFLAGDAAHIHP 296

                         330
                  ....*....|.
gi 1072812961 314 PFNGEGIAYAM 324
Cdd:pfam01494 297 PTGGQGLNTAI 307
 
Name Accession Description Interval E-value
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 11-334 2.82e-105

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 313.49  E-value: 2.82e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAMGIDISEEagwsRNKGLRIIGGGARLQ 90
Cdd:TIGR02032   2 DVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYKPCGGALSPRALEELDLPGELIVNL----VRGARFFSPNGDSVE 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  91 LDWPelasyPDYGLVRKRDDFDEQLARQAQKAGARL-YERCNVGEPVVEPRTGRITgvhaklgeDKTPVTFRAPLVVAAD 169
Cdd:TIGR02032  78 IPIE-----TELAYVIDRDAFDEQLAERAQEAGAELrLGTRVLDVEIHDDRVVVIV--------RGSEGTVTAKIVIGAD 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 170 GNSSRLSLAMGlHRREDRPMGVAVRTYFTTPrhDDDYLESWLELWDRRGPGPdrllPGYGWIFGMGDGTSNVGLGILnss 249
Cdd:TIGR02032 145 GSRSIVAKKLG-LKKEPREYGVAARAEVEMP--DEEVDEDFVEVYIDRGIVP----GGYGWVFPKGDGTANVGVGSR--- 214

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 250 SAFRELDWREVLKAWCASMPEdwgfTPDNMTTPIRGAALPMAFNRQPHYTRGLLLVGDAGGLVNPFNGEGIAYAMESGQL 329
Cdd:TIGR02032 215 SAEEGEDPKKYLKDFLARRPE----LKDAETVEVCGALIPIGRPDEKLVRGNVLLVGDAAGHVNPLTGEGIYYAMRSGDI 290


                  ....*
gi 1072812961 330 AADVI 334
Cdd:TIGR02032 291 AAEVV 295
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
17-359 1.30e-66

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 214.06  E-value: 1.30e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  17 AGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAMGIDiSEEAGWSRNKGLRIIGGgarlqlDWPEL 96
Cdd:COG0644     1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKICGGGLLPRALEELEPLGLD-EPLERPVRGARFYSPGG------KSVEL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  97 ASYPDYGLVRKRDDFDEQLARQAQKAGARLYERCNVGEPVVEPrtGRITgVHAKLGEdktpvTFRAPLVVAADGNSSRLS 176
Cdd:COG0644    74 PPGRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDD--GRVV-VRTGDGE-----EIRADYVVDADGARSLLA 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 177 LAMGLHRREDRP--MGVAVRTYFTTPRHDDDYLESWLELWDRRGPGpdrllpGYGWIFGMGDGTSNVGlgilnsssafre 254
Cdd:COG0644   146 RKLGLKRRSDEPqdYALAIKEHWELPPLEGVDPGAVEFFFGEGAPG------GYGWVFPLGDGRVSVG------------ 207

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 255 ldwrevlkawcasmpedwgftpdnmttpirgaaLPMAFNRQPHYTRGLLLVGDAGGLVNPFNGEGIAYAMESGQLAADVI 334
Cdd:COG0644   208 ---------------------------------IPLGGPRPRLVGDGVLLVGDAAGFVDPLTGEGIHLAMKSGRLAAEAI 254

                         330       340
                  ....*....|....*....|....*
gi 1072812961 335 VQAHARatDAQRERALHTYPQVLKD 359
Cdd:COG0644   255 AEALEG--GDFSAEALAEYERRLRE 277
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 8-353 3.58e-21

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 93.46  E-value: 3.58e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961   8 HTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAMGI--DISEEAGWSRNKGLRIIGG 85
Cdd:COG0654     2 MRTDVLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGRGIALSPRSLELLRRLGLwdRLLARGAPIRGIRVRDGSD 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  86 GARL-QLDWPELASYPDYGLvrKRDDFDEQLARQAQKAGARLYERCNVGEpvVEPRTGRITgVHAKLGEdktpvTFRAPL 164
Cdd:COG0654    82 GRVLaRFDAAETGLPAGLVV--PRADLERALLEAARALGVELRFGTEVTG--LEQDADGVT-VTLADGR-----TLRADL 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 165 VVAADGNSSRlslamglhrredrpmgvaVRTYFTTPRHDDDYLESWLelwdrrgpgpdrllpgygwIFGMgdgtsnvglg 244
Cdd:COG0654   152 VVGADGARSA------------------VRRLLGIGFTGRDYPQRAL-------------------WAGV---------- 184

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 245 ilnsssafrELDWREVLKAWCASMPEdwgftpdnMTTPIRGAALPMAFNRQPHYTRG-LLLVGDAGGLVNPFNGEGIAYA 323
Cdd:COG0654   185 ---------RTELRARLAAAGPRLGE--------LLELSPRSAFPLRRRRAERWRRGrVVLLGDAAHTMHPLGGQGANLA 247

                         330       340       350
                  ....*....|....*....|....*....|
gi 1072812961 324 MESGQLAADVIVQAHARATDaqrERALHTY 353
Cdd:COG0654   248 LRDAAALAWKLAAALRGRDD---EAALARY 274
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
8-335 1.04e-16

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 81.10  E-value: 1.04e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961   8 HTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREK------VCGDGLTPRATKQLVAM---------------GI 66
Cdd:COG0665     1 ATADVVVIGGGIAGLSTAYHLARRGLDVTVLERGRPGSGAsgrnagQLRPGLAALADRALVRLarealdlwrelaaelGI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  67 D--------------------ISEEAGWSRNKGLRI-IGGGARLQLDWPELASYPDYGLVRKRDDFD-------EQLARQ 118
Cdd:COG0665    81 DcdfrrtgvlylarteaelaaLRAEAEALRALGLPVeLLDAAELREREPGLGSPDYAGGLYDPDDGHvdpaklvRALARA 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 119 AQKAGARLYERCNVGEpvVEPRTGRITGVHAKLGedktpvTFRAP-LVVAADGNSSRLSLAMGLhrredRPMGVAVRTYF 197
Cdd:COG0665   161 ARAAGVRIREGTPVTG--LEREGGRVTGVRTERG------TVRADaVVLAAGAWSARLLPMLGL-----RLPLRPVRGYV 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 198 TTPRHDDDYLESWLeLWDRRG---PGPD-RLLPGYGWIFGMGDGTSNVGLGILNSSSA---FRELDWREVLKAWCASMPe 270
Cdd:COG0665   228 LVTEPLPDLPLRPV-LDDTGVylrPTADgRLLVGGTAEPAGFDRAPTPERLEALLRRLrrlFPALADAEIVRAWAGLRP- 305

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1072812961 271 dwgFTPDNMttPIRGAAlpmafnrqPHYTRGLLLVGdagglvnpFNGEGIAYAMESGQLAADVIV 335
Cdd:COG0665   306 ---MTPDGL--PIIGRL--------PGAPGLYVATG--------HGGHGVTLAPAAGRLLADLIL 349
PLN00093 PLN00093
geranylgeranyl diphosphate reductase; Provisional
 12-367 2.12e-16

geranylgeranyl diphosphate reductase; Provisional


Pssm-ID: 177713 [Multi-domain]  Cd Length: 450  Bit Score: 80.95  E-value: 2.12e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  12 VIVVGAGPAGSTTAYYLAKAGLDVLLLEKTaFPREKVCGdGLTPratkqLVAMG-IDISEEAGWSRNKGLRIIGGgARLQ 90
Cdd:PLN00093   42 VAVIGGGPAGACAAETLAKGGIETFLIERK-LDNAKPCG-GAIP-----LCMVGeFDLPLDIIDRKVTKMKMISP-SNVA 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  91 LDWPE-LASYPDYGLVRkRDDFDEQLARQAQKAGAR----LYERCNVGEPVVEPRTgritgVHAKLGEDK----TPVTFR 161
Cdd:PLN00093  114 VDIGKtLKPHEYIGMVR-REVLDSFLRERAQSNGATlingLFTRIDVPKDPNGPYV-----IHYTSYDSGsgagTPKTLE 187

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 162 APLVVAADGNSSRLSLAMGLHrreDRPMGVAVRTYFTTPRHDDDYLESWLELWDRRGPGPDRllpgYGWIFGMGDGTSnV 241
Cdd:PLN00093  188 VDAVIGADGANSRVAKDIDAG---DYDYAIAFQERIKIPDDKMEYYEDLAEMYVGDDVSPDF----YGWVFPKCDHVA-V 259

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 242 GLGILNSSSAFRELD--WREVLKAWCASmpedwgftpdnmTTPIRGAALPMAFNRQPHYTRG-LLLVGDAGGLVNPFNGE 318
Cdd:PLN00093  260 GTGTVVNKPAIKKYQraTRNRAKDKIAG------------GKIIRVEAHPIPEHPRPRRVRGrVALVGDAAGYVTKCSGE 327

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*....
gi 1072812961 319 GIAYAMESGQLAADVIVQAHARATDAQRERALHTYPQVLKDTYGGYYTL 367
Cdd:PLN00093  328 GIYFAAKSGRMCAEAIVEGSENGTRMVDEADLREYLRKWDKKYWPTYKV 376
PRK06185 PRK06185
FAD-dependent oxidoreductase;
1-205 1.29e-13

FAD-dependent oxidoreductase;


Pssm-ID: 235729 [Multi-domain]  Cd Length: 407  Bit Score: 72.20  E-value: 1.29e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961   1 MTETLsehTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTA-FPREkVCGDGLTPRATKQLVAMG-IDISEEAGWSRNK 78
Cdd:PRK06185    1 MAEVE---TTDCCIVGGGPAGMMLGLLLARAGVDVTVLEKHAdFLRD-FRGDTVHPSTLELMDELGlLERFLELPHQKVR 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  79 GLRIIGGGARLQL-DWPELASYPDYGLVRKRDDFDEQLARQAQK-AGARLYERCNVGEPVVEPrtGRITGVHAKLGEDkt 156
Cdd:PRK06185   77 TLRFEIGGRTVTLaDFSRLPTPYPYIAMMPQWDFLDFLAEEASAyPNFTLRMGAEVTGLIEEG--GRVTGVRARTPDG-- 152

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1072812961 157 PVTFRAPLVVAADGNSSRLSLAMGLH-RREDRPMGVavrTYFTTPRHDDD 205
Cdd:PRK06185  153 PGEIRADLVVGADGRHSRVRALAGLEvREFGAPMDV---LWFRLPREPDD 199
PRK10015 PRK10015
oxidoreductase; Provisional
 5-389 6.69e-13

oxidoreductase; Provisional


Pssm-ID: 182194 [Multi-domain]  Cd Length: 429  Bit Score: 70.01  E-value: 6.69e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961   5 LSEHTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAMGIDISE--EAGWSRNKgLRI 82
Cdd:PRK10015    1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAASApvERKVTREK-ISF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  83 IGGGARLQLDW----PELASYPDYGLVRKRddFDEQLARQAQKAGARLYERCNVGEPVVEprTGRITGVHAklGEDktpv 158
Cdd:PRK10015   80 LTEESAVTLDFhreqPDVPQHASYTVLRNR--LDPWLMEQAEQAGAQFIPGVRVDALVRE--GNKVTGVQA--GDD---- 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 159 TFRAPLVVAADGNSSRLSLAMGLHRRED---RPMGVAVRTYFTTPRHDDDYLESWLE--LWDRRGPGPDRLLPG------ 227
Cdd:PRK10015  150 ILEANVVILADGVNSMLGRSLGMVPASDphhYAVGVKEVIGLTPEQINDRFNITGEEgaAWLFAGSPSDGLMGGgflytn 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 228 -----YGWIFGMGD---GTSNVG--LGILNSSSAFRELDWREVLKAWCASMPEDWGFtpdnmttpirgAALPMAFNrqph 297
Cdd:PRK10015  230 kdsisLGLVCGLGDiahAQKSVPqmLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGL-----------AMVPQLVN---- 294

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 298 ytRGLLLVGDAGGL-VN-PFNGEGIAYAMESGQLAADVIVQAHARA--------------------TDAQRERAL----- 350
Cdd:PRK10015  295 --DGVMIVGDAAGFcLNlGFTVRGMDLAIASAQAAATTVIAAKERAdfsasslaqykreleqscvmRDMQHFRKIpalme 372

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....
gi 1072812961 351 -----HTYPQVLKDTYGGYYTLGRGFVKLIGNpKVMKIAAQRGL 389
Cdd:PRK10015  373 nprlfSQYPRMVADIMNDMFTIDGKPNQPVRK-MIMGHAKKIGL 415
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 10-324 1.57e-12

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 68.12  E-value: 1.57e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  10 ADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTA----FPRekvcGDGLTPRATKQLVAMGIDISEEAGWSRNKGLRIIGG 85
Cdd:pfam01494   2 TDVLIVGGGPAGLMLALLLARAGVRVVLVERHAttsvLPR----AHGLNQRTMELLRQAGLEDRILAEGVPHEGMGLAFY 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  86 GARLQLDWPELASYPDYGLVrKRDDFDEQLARQAQKAGARLYErcnVGEPVVEPRTGriTGVHAKL--GEDKTPVTFRAP 163
Cdd:pfam01494  78 NTRRRADLDFLTSPPRVTVY-PQTELEPILVEHAEARGAQVRF---GTEVLSLEQDG--DGVTAVVrdRRDGEEYTVRAK 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 164 LVVAADGNSSRLSLAMGLHRREDRP-----MGVAVRTYFTTPRHDDDYLESWLELWDRRG----PGPDRLLPGYGWIFGM 234
Cdd:pfam01494 152 YLVGCDGGRSPVRKTLGIEFEGFEGvpfgsLDVLFDAPDLSDPVERAFVHYLIYAPHSRGfmvgPWRSAGRERYYVQVPW 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 235 GDGTSNVGlgilnsssafRELDWREVLKAWcasmPEDWGfTPDNMTTPIRGAALPMAFNRQPHYTRG-LLLVGDAGGLVN 313
Cdd:pfam01494 232 DEEVEERP----------EEFTDEELKQRL----RSIVG-IDLALVEILWKSIWGVASRVATRYRKGrVFLAGDAAHIHP 296

                         330
                  ....*....|.
gi 1072812961 314 PFNGEGIAYAM 324
Cdd:pfam01494 297 PTGGQGLNTAI 307
PRK10157 PRK10157
putative oxidoreductase FixC; Provisional
 5-359 5.39e-11

putative oxidoreductase FixC; Provisional


Pssm-ID: 182273 [Multi-domain]  Cd Length: 428  Bit Score: 64.16  E-value: 5.39e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961   5 LSEHTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREK-VCGDGLTPRATKQLVAmgiDISEEAGWSR---NKGL 80
Cdd:PRK10157    1 MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKnVTGGRLYAHSLEHIIP---GFADSAPVERlitHEKL 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  81 RIIGGGARLQLDW----PELASYPDYGLVRKRddFDEQLARQAQKAGARLYERCNVgEPVVEpRTGRITGVHAKlGEdkt 156
Cdd:PRK10157   78 AFMTEKSAMTMDYcngdETSPSQRSYSVLRSK--FDAWLMEQAEEAGAQLITGIRV-DNLVQ-RDGKVVGVEAD-GD--- 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 157 pvTFRAPLVVAADGNSSRLSLAMGLHRR-EDRPMGVAVRTYFTTPRhddDYLESWLELWDRRGPG------PDRLLPGYG 229
Cdd:PRK10157  150 --VIEAKTVILADGVNSILAEKLGMAKRvKPTDVAVGVKELIELPK---SVIEDRFQLQGNQGAAclfagsPTDGLMGGG 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 230 WIFgmgDGTSNVGLGILNSSSAFREldwrevLKAWCASMPEDWGFTPdnMTTP-IRGAAL--------PMA-FNRQPHYT 299
Cdd:PRK10157  225 FLY---TNENTLSLGLVCGLHHLHD------AKKSVPQMLEDFKQHP--AVAPlIAGGKLveysahvvPEAgINMLPELV 293

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1072812961 300 R-GLLLVGDAGGLVNP--FNGEGIAYAMESGQLAADVIVQAHARAtDAQRERaLHTYPQVLKD 359
Cdd:PRK10157  294 GdGVLIAGDAAGMCMNlgFTIRGMDLAIAAGEAAAKTVLSAMKSD-DFSKQK-LAEYRQHLES 354
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 11-332 6.12e-11

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 63.19  E-value: 6.12e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPRE-------KVCGDGLTPRATKQLVAM---------------GIDI 68
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGSgasgrnaGLIHPGLRYLEPSELARLalealdlweeleeelGIDC 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  69 -------------SEEAGWSRNKGLRIIGGGARLQLD-------WPELAS------YPDYGLVRkRDDFDEQLARQAQKA 122
Cdd:pfam01266  81 gfrrcgvlvlardEEEEALEKLLAALRRLGVPAELLDaeelrelEPLLPGlrgglfYPDGGHVD-PARLLRALARAAEAL 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 123 GARLYERCnvgePVVE-PRTGRITGVHaklgedkTPVTFRApLVVAAdGNSSRLslamgLHRREDRPMGVAVRTY-FTTP 200
Cdd:pfam01266 160 GVRIIEGT----EVTGiEEEGGVWGVV-------TTGEADA-VVNAA-GAWADL-----LALPGLRLPVRPVRGQvLVLE 221

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 201 RHDDDYLESWLELWDRRGPG-------PDRLLPGYGWIFGMGDGTSNVGLGILNSSSAFREL--DWREVLKAWCASMPed 271
Cdd:pfam01266 222 PLPEALLILPVPITVDPGRGvylrpraDGRLLLGGTDEEDGFDDPTPDPEEIEELLEAARRLfpALADIERAWAGLRP-- 299

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1072812961 272 wgfTPDNMttPIRGaalpmafnrqPHYTRGLLLVGDAGGLvnpfngeGIAYAMESGQLAAD 332
Cdd:pfam01266 300 ---LPDGL--PIIG----------RPGSPGLYLATGHGGH-------GLTLAPGIGKLLAE 338
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
 7-170 4.61e-10

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 61.00  E-value: 4.61e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961   7 EHTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPR-----------------EKVCG---------------DGLT 54
Cdd:COG1053     1 DHEYDVVVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRGghtaaaqgginaagtnvQKAAGedspeehfydtvkggDGLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  55 ------------PRATKQLVAMGIDiseeagWSRNKGLRIIGGGARLqldWPELASYPDYG---LVRKrddfdeqLARQA 119
Cdd:COG1053    81 dqdlvealaeeaPEAIDWLEAQGVP------FSRTPDGRLPQFGGHS---VGRTCYAGDGTghaLLAT-------LYQAA 144

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1072812961 120 QKAGARLYERCNVGEPVVEprTGRITGVHAKlGEDKTPVTFRAPLVVAADG 170
Cdd:COG1053   145 LRLGVEIFTETEVLDLIVD--DGRVVGVVAR-DRTGEIVRIRAKAVVLATG 192
TIGR00292 TIGR00292
thiazole biosynthesis enzyme; This enzyme is involved in the biosynthesis of the thiamine ...
 10-170 1.72e-08

thiazole biosynthesis enzyme; This enzyme is involved in the biosynthesis of the thiamine precursor thiazole, and is repressed by thiamine. This family includes c-thi1, a Citrus gene induced during natural and ethylene induced fruit maturation and is highly homologous to plant and yeast thi genes involved in thiamine biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine]


Pssm-ID: 273001  Cd Length: 254  Bit Score: 55.23  E-value: 1.72e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  10 ADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRAtkqlvamgIDISEEagwsrnkglriigggARL 89
Cdd:TIGR00292  22 SDVIIVGAGPSGLTAAYYLAKNGLKVCVLERSLAFGGGSWGGGMLFSK--------IVVEKP---------------AHE 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  90 QLDWPELASYP--DYGLVRKRDDFDEQLARQAQKAGARLYERCNVGEPVVEPRTGRITGV--------HAKLGEDktPVT 159
Cdd:TIGR00292  79 ILDEFGIRYEDegDGYVVADSAEFISTLASKALQAGAKIFNGTSVEDLITRDDTVGVAGVvinwsaieLAGLHVD--PLT 156

                         170
                  ....*....|.
gi 1072812961 160 FRAPLVVAADG 170
Cdd:TIGR00292 157 QRSRVVVDATG 167
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
11-71 4.56e-08

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 54.36  E-value: 4.56e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTA----------------FPrEKVCGDGLTPRATKQLVAMGIDISEE 71
Cdd:COG0492     2 DVVIIGAGPAGLTAAIYAARAGLKTLVIEGGEpggqlattkeienypgFP-EGISGPELAERLREQAERFGAEILLE 77
COG2509 COG2509
FAD-dependent dehydrogenase [General function prediction only];
11-40 1.11e-07

FAD-dependent dehydrogenase [General function prediction only];


Pssm-ID: 441999 [Multi-domain]  Cd Length: 466  Bit Score: 53.58  E-value: 1.11e-07
                          10        20        30
                  ....*....|....*....|....*....|
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 40
Cdd:COG2509    32 DVVIVGAGPAGLFAALELAEAGLKPLVLER 61
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 9-40 1.74e-07

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 53.31  E-value: 1.74e-07
                          10        20        30
                  ....*....|....*....|....*....|..
gi 1072812961   9 TADVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 40
Cdd:COG1233     3 MYDVVVIGAGIGGLAAAALLARAGYRVTVLEK 34
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 11-42 3.69e-07

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 52.14  E-value: 3.69e-07
                          10        20        30
                  ....*....|....*....|....*....|..
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTA 42
Cdd:COG1232     3 RVAVIGGGIAGLTAAYRLAKAGHEVTVLEASD 34
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
14-56 3.80e-07

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 47.14  E-value: 3.80e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1072812961  14 VVGAGPAGSTTAYYLAKAGLDVLLLEKtafpREKVCGDGLTPR 56
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEK----RDRLGGNAYSYR 39
mhpA PRK06183
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
2-211 7.41e-07

bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;


Pssm-ID: 235727 [Multi-domain]  Cd Length: 500  Bit Score: 51.06  E-value: 7.41e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961   2 TETLSEHTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEK--TAFPRekvcgdgltPRAT-------KQLVAMGID----- 67
Cdd:PRK06183    3 AQHPDAHDTDVVIVGAGPVGLTLANLLGQYGVRVLVLERwpTLYDL---------PRAVgiddealRVLQAIGLAdevlp 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  68 ISEEAGwsrnkGLRIIGGGARLQLDWpELASYPDYGLvRKRDDFDEQLARQAQKAGARLYERCNV--GEPVV--EPRTGR 143
Cdd:PRK06183   74 HTTPNH-----GMRFLDAKGRCLAEI-ARPSTGEFGW-PRRNAFHQPLLEAVLRAGLARFPHVRVrfGHEVTalTQDDDG 146

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1072812961 144 ITgVHAKlGEDKTPVTFRAPLVVAADGNSSrlslamglhrredrpmgvAVRTYFTTPRHDDDYLESWL 211
Cdd:PRK06183  147 VT-VTLT-DADGQRETVRARYVVGCDGANS------------------FVRRTLGVPFEDLTFPERWL 194
solA PRK11259
N-methyl-L-tryptophan oxidase;
11-40 1.03e-06

N-methyl-L-tryptophan oxidase;


Pssm-ID: 236887 [Multi-domain]  Cd Length: 376  Bit Score: 50.60  E-value: 1.03e-06
                          10        20        30
                  ....*....|....*....|....*....|
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 40
Cdd:PRK11259    5 DVIVIGLGSMGSAAGYYLARRGLRVLGLDR 34
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
8-39 1.14e-06

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 50.69  E-value: 1.14e-06
                          10        20        30
                  ....*....|....*....|....*....|..
gi 1072812961   8 HTADVIVVGAGPAGSTTAYYLAKAGLDVLLLE 39
Cdd:COG1231     6 RGKDVVIVGAGLAGLAAARELRKAGLDVTVLE 37
PLN02985 PLN02985
squalene monooxygenase
 3-175 1.15e-06

squalene monooxygenase


Pssm-ID: 178566 [Multi-domain]  Cd Length: 514  Bit Score: 50.67  E-value: 1.15e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961   3 ETLSEHTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAMGI-DISEEAGWSRNKGLR 81
Cdd:PLN02985   37 EERKDGATDVIIVGAGVGGSALAYALAKDGRRVHVIERDLREPERMMGEFMQPGGRFMLSKLGLeDCLEGIDAQKATGMA 116

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  82 IIGGGARLQLDWP-ELASYPDYGLVR--KRDDFDEQLARQAQKAGARLYERCNVGEPVVEprTGRITGVHAK--LGEDKT 156
Cdd:PLN02985  117 VYKDGKEAVAPFPvDNNNFPYEPSARsfHNGRFVQRLRQKASSLPNVRLEEGTVKSLIEE--KGVIKGVTYKnsAGEETT 194

                         170
                  ....*....|....*....
gi 1072812961 157 PVtfrAPLVVAADGNSSRL 175
Cdd:PLN02985  195 AL---APLTVVCDGCYSNL 210
PRK08773 PRK08773
UbiH/UbiF family hydroxylase;
8-343 1.19e-06

UbiH/UbiF family hydroxylase;


Pssm-ID: 181552 [Multi-domain]  Cd Length: 392  Bit Score: 50.25  E-value: 1.19e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961   8 HTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGL-----TPRATKQLVAMGIdiseeagWSRNKGLRI 82
Cdd:PRK08773    5 SRRDAVIVGGGVVGAACALALADAGLSVALVEGREPPRWQADQPDLrvyafAADNAALLDRLGV-------WPAVRAARA 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  83 ----------IGGGARLQLDWPELASyPDYGLVRKRDDFDEQLARQAQKAGARLYERCNVGEpvVEPRTgriTGVHAKLG 152
Cdd:PRK08773   78 qpyrrmrvwdAGGGGELGFDADTLGR-EQLGWIVENDLLVDRLWAALHAAGVQLHCPARVVA--LEQDA---DRVRLRLD 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 153 EDKtpvTFRAPLVVAADGNSSRLSLAMGL--HRREDRPMGVAVRTYFTTPRHDddyleswlELWDRRGP-GPDRLLPgyg 229
Cdd:PRK08773  152 DGR---RLEAALAIAADGAASTLRELAGLpvSRHDYAQRGVVAFVDTEHPHQA--------TAWQRFLPtGPLALLP--- 217

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 230 wifgMGDGTSNVgLGILNSSSAFRELDW------REVLKAWCASMPEdwgftpdnmttpIRGAALPMAF--NRQ--PHYT 299
Cdd:PRK08773  218 ----FADGRSSI-VWTLPDAEAERVLALdeaafsRELTQAFAARLGE------------VRVASPRTAFplRRQlvQQYV 280

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1072812961 300 RG-LLLVGDAGGLVNPFNGEGIAYAMESGQLAADVIVQAHARATD 343
Cdd:PRK08773  281 SGrVLTLGDAAHVVHPLAGQGVNLGLRDVAALQQLVRQAHARRAD 325
soxA_mon TIGR01377
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ...
 11-58 1.95e-06

sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]


Pssm-ID: 130444 [Multi-domain]  Cd Length: 380  Bit Score: 49.83  E-value: 1.95e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFP--REKVCGDGLTPRAT 58
Cdd:TIGR01377   2 DVIVVGAGIMGCFAAYHLAKHGKKTLLLEQFDLPhsRGSSHGQSRIIRKA 51
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 11-170 2.22e-06

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 49.59  E-value: 2.22e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKT--------------AFPREKVCGDGLTP-------------RATKQLVA 63
Cdd:pfam00890   1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEKGqpfggatawssggiDALGNPPQGGIDSPelhptdtlkgldeLADHPYVE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  64 MGIDISEEA-GWSRNKGLRIIGGGARLqLDWPEL------ASYPDYGLVRKRDDFD-----EQLARQAQKAGARLYERCN 131
Cdd:pfam00890  81 AFVEAAPEAvDWLEALGVPFSRTEDGH-LDLRPLgglsatWRTPHDAADRRRGLGTghallARLLEGLRKAGVDFQPRTA 159

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1072812961 132 VGEPVVEPrtGRITGVHAKLGEDKTPVTFRAP--LVVAADG 170
Cdd:pfam00890 160 ADDLIVED--GRVTGAVVENRRNGREVRIRAIaaVLLATGG 198
PTZ00367 PTZ00367
squalene epoxidase; Provisional
 11-175 2.94e-06

squalene epoxidase; Provisional


Pssm-ID: 240384 [Multi-domain]  Cd Length: 567  Bit Score: 49.46  E-value: 2.94e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPR-EKVCGDGLTP---RATKQL----VAMGIDISEEagwsrnkGLRI 82
Cdd:PTZ00367   35 DVIIVGGSIAGPVLAKALSKQGRKVLMLERDLFSKpDRIVGELLQPggvNALKELgmeeCAEGIGMPCF-------GYVV 107

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  83 I-GGGARLQLDWPELASypdyGLVRKRDDFDEQLAR---QAQKAGARLYERCNVGepVVEPRTG---RITGVHAKLGEDK 155
Cdd:PTZ00367  108 FdHKGKQVKLPYGAGAS----GVSFHFGDFVQNLRShvfHNCQDNVTMLEGTVNS--LLEEGPGfseRAYGVEYTEAEKY 181

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1072812961 156 ----TP----------------VTFRAPLVVAADGNSSRL 175
Cdd:PTZ00367  182 dvpeNPfredppsanpsattvrKVATAPLVVMCDGGMSKF 221
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 11-40 4.61e-06

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 48.71  E-value: 4.61e-06
                          10        20        30
                  ....*....|....*....|....*....|
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 40
Cdd:COG2072     8 DVVVIGAGQAGLAAAYHLRRAGIDFVVLEK 37
PRK06184 PRK06184
hypothetical protein; Provisional
 8-173 6.34e-06

hypothetical protein; Provisional


Pssm-ID: 235728 [Multi-domain]  Cd Length: 502  Bit Score: 48.44  E-value: 6.34e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961   8 HTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAMGI-DiseeagwsrnkglRIIGGG 86
Cdd:PRK06184    2 TTTDVLIVGAGPTGLTLAIELARRGVSFRLIEKAPEPFPGSRGKGIQPRTQEVFDDLGVlD-------------RVVAAG 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  87 ARlqldWPELASYPDYGLVRKRDDFDEQLARQA---------------QKAGARLYE---RCNVGEPVVEPRTGRiTGVH 148
Cdd:PRK06184   69 GL----YPPMRIYRDDGSVAESDMFAHLEPTPDepyplplmvpqwrteRILRERLAElghRVEFGCELVGFEQDA-DGVT 143

                         170       180
                  ....*....|....*....|....*
gi 1072812961 149 AKLGEDKTPVTFRAPLVVAADGNSS 173
Cdd:PRK06184  144 ARVAGPAGEETVRARYLVGADGGRS 168
PRK07208 PRK07208
hypothetical protein; Provisional
 11-42 7.92e-06

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 47.96  E-value: 7.92e-06
                          10        20        30
                  ....*....|....*....|....*....|..
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTA 42
Cdd:PRK07208    6 SVVIIGAGPAGLTAAYELLKRGYPVTVLEADP 37
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 11-112 8.13e-06

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 47.31  E-value: 8.13e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEktafpREKVC-GDGLTPraTKQLVAMGIDISEEAGW-----SRNKGLRIIG 84
Cdd:pfam07992   2 DVVVIGGGPAGLAAALTLAQLGGKVTLIE-----DEGTCpYGGCVL--SKALLGAAEAPEIASLWadlykRKEEVVKKLN 74

                          90       100
                  ....*....|....*....|....*...
gi 1072812961  85 GGARLQLDWPELASYPDYGLVRKRDDFD 112
Cdd:pfam07992  75 NGIEVLLGTEVVSIDPGAKKVVLEELVD 102
Lycopene_cycl pfam05834
Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. ...
 11-349 1.30e-05

Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclization of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare.


Pssm-ID: 310433 [Multi-domain]  Cd Length: 380  Bit Score: 47.03  E-value: 1.30e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  11 DVIVVGAGPAGSTTAYYL--AKAGLDVLLLEKTA---FPREKV-CGDGLTPRATKQLVamgidiseEAGWSrnkGLRI-I 83
Cdd:pfam05834   1 DVVIIGAGPAGLSLAARLaaAKPGLSVVLIEPGPsllRPNNYVwSDEFEDLGALEDCV--------GHSWP---GTRVhF 69

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  84 GGGARLQLDWPelasypdYGLVRkRDDFDEQLARQAQKAGARLYercnvgepvvEPRTGRITGVHAKLGEDKTP--VTFR 161
Cdd:pfam05834  70 DDGKPILIGRA-------YGRVS-SKRLEEEMLQRCVENGVIRL----------NAKVESVEADPVGESLVVCEggRTIR 131

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 162 APLVVAADGN-SSRLSLAMGLHrredRPMGVAVRTyfTTPRHDDDYleswLELWDRRGPGPDRlLPGYGWIFGMGDGTSN 240
Cdd:pfam05834 132 ARLVFDARGLgSLPPGRTLGYQ----TFYGVEVEV--DNPPFDPDV----MVLMDARVPQPLK-GPTFLYALPLDPDRLL 200

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 241 VGLGILNSSSAFRELDWREVLKAWCASM--------PEDWGFTPDNMTTPIRG-AALPMAFnrqphytrglllvGDAGGL 311
Cdd:pfam05834 201 VEETYLSSGPVLPFDALKKRLAAYLRALgirilevvEEEQGVIPMTLGGDLPNtPQKVLRI-------------GAAAGM 267

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1072812961 312 VNPFNGEGIAYAMESGQLAADVIVQA------HARATDA--QRERA 349
Cdd:pfam05834 268 VHPATGYSVARSLRLAPKLASAIAAAlrlsspSARAWRDlwPRERW 313
Thi4 pfam01946
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.
 1-44 1.93e-05

Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.


Pssm-ID: 460393  Cd Length: 232  Bit Score: 45.54  E-value: 1.93e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1072812961   1 MTETLSEHTADVIVVGAGPAGSTTAYYLAKA-GLDVLLLEKTAFP 44
Cdd:pfam01946   9 FEDLDDYAESDVVIVGAGSSGLTAAYYLAKNrGLKVAIIERSVSP 53
FAD_oxidored pfam12831
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ...
 11-166 2.07e-05

FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.


Pssm-ID: 432816 [Multi-domain]  Cd Length: 420  Bit Score: 46.45  E-value: 2.07e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFprekvCGdGLtprATKQLVA--MGIdiseeagwsRNKGLRIIGGGAR 88
Cdd:pfam12831   1 DVVVVGGGPAGVAAAIAAARAGAKVLLVERRGF-----LG-GM---LTSGLVGpdMGF---------YLNKEQVVGGIAR 62

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  89 lqldwpEL--------ASYPDYGLVRKRDDFDEQLARQA-----QKAGARLYERCNVGEPVVEPrtGRITGVhaKLGEDK 155
Cdd:pfam12831  63 ------EFrqrlrargGLPGPYGLRGGWVPFDPEVAKAVldemlAEAGVTVLLHTRVVGVVKEG--GRITGV--TVETKG 132

                         170
                  ....*....|.
gi 1072812961 156 TPVTFRAPLVV 166
Cdd:pfam12831 133 GRITIRAKVFI 143
BetA COG2303
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ...
 6-39 2.20e-05

Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 441878 [Multi-domain]  Cd Length: 531  Bit Score: 46.74  E-value: 2.20e-05
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1072812961   6 SEHTADVIVVGAGPAGSTTAYYLAK-AGLDVLLLE 39
Cdd:COG2303     1 MLEEYDYVIVGAGSAGCVLANRLSEdAGLRVLLLE 35
GIDA pfam01134
Glucose inhibited division protein A;
11-38 2.51e-05

Glucose inhibited division protein A;


Pssm-ID: 250388 [Multi-domain]  Cd Length: 391  Bit Score: 46.01  E-value: 2.51e-05
                          10        20
                  ....*....|....*....|....*...
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLL 38
Cdd:pfam01134   1 DVIVIGGGHAGCEAALAAARMGAKVLLI 28
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
 11-40 2.74e-05

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 46.23  E-value: 2.74e-05
                          10        20        30
                  ....*....|....*....|....*....|
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 40
Cdd:COG1249     5 DLVVIGAGPGGYVAAIRAAQLGLKVALVEK 34
HdrA COG1148
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
11-43 4.33e-05

Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];


Pssm-ID: 440762 [Multi-domain]  Cd Length: 563  Bit Score: 45.62  E-value: 4.33e-05
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAF 43
Cdd:COG1148   142 RALVIGGGIAGMTAALELAEQGYEVYLVEKEPE 174
PRK12843 PRK12843
FAD-dependent oxidoreductase;
11-43 4.78e-05

FAD-dependent oxidoreductase;


Pssm-ID: 237225 [Multi-domain]  Cd Length: 578  Bit Score: 45.50  E-value: 4.78e-05
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAF 43
Cdd:PRK12843   18 DVIVIGAGAAGMSAALFAAIAGLKVLLVERTEY 50
COG3573 COG3573
Predicted oxidoreductase [General function prediction only];
6-39 6.25e-05

Predicted oxidoreductase [General function prediction only];


Pssm-ID: 442794 [Multi-domain]  Cd Length: 551  Bit Score: 45.17  E-value: 6.25e-05
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1072812961   6 SEHTADVIVVGAGPAGSTTAYYLAKAGLDVLLLE 39
Cdd:COG3573     2 AAMDADVIVVGAGLAGLVAAAELADAGRRVLLLD 35
LhgO COG0579
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
6-40 6.78e-05

L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];


Pssm-ID: 440344 [Multi-domain]  Cd Length: 418  Bit Score: 44.75  E-value: 6.78e-05
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 1072812961   6 SEHTADVIVVGAGPAGSTTAYYLAKA-GLDVLLLEK 40
Cdd:COG0579     1 MMEMYDVVIIGAGIVGLALARELSRYeDLKVLVLEK 36
HI0933_like pfam03486
HI0933-like protein;
11-40 8.50e-05

HI0933-like protein;


Pssm-ID: 427330 [Multi-domain]  Cd Length: 406  Bit Score: 44.49  E-value: 8.50e-05
                          10        20        30
                  ....*....|....*....|....*....|
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 40
Cdd:pfam03486   2 DVIVIGGGAAGLMAAISAAKRGRRVLLIEK 31
PRK09126 PRK09126
FAD-dependent hydroxylase;
8-40 9.21e-05

FAD-dependent hydroxylase;


Pssm-ID: 236385 [Multi-domain]  Cd Length: 392  Bit Score: 44.55  E-value: 9.21e-05
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1072812961   8 HTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 40
Cdd:PRK09126    2 MHSDIVVVGAGPAGLSFARSLAGSGLKVTLIER 34
Trp_halogenase pfam04820
Tryptophan halogenase; Tryptophan halogenase catalyzes the chlorination of tryptophan to form ...
 11-70 1.27e-04

Tryptophan halogenase; Tryptophan halogenase catalyzes the chlorination of tryptophan to form 7-chlorotryptophan. This is the first step in the biosynthesis of pyrrolnitrin, an antibiotic with broad-spectrum anti-fungal activity. Tryptophan halogenase is NADH-dependent.


Pssm-ID: 398475 [Multi-domain]  Cd Length: 457  Bit Score: 44.24  E-value: 1.27e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKA---GLDVLLLEKTAFPREKVcGDGLTPrATKQLVAM-GIDISE 70
Cdd:pfam04820   1 KIVIVGGGTAGWMAAAALARAlkgGLDVTLVESEEIGTVGV-GEATIP-SIRTFNRMlGIDEAE 62
PRK12834 PRK12834
putative FAD-binding dehydrogenase; Reviewed
 7-39 1.85e-04

putative FAD-binding dehydrogenase; Reviewed


Pssm-ID: 183782 [Multi-domain]  Cd Length: 549  Bit Score: 43.73  E-value: 1.85e-04
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1072812961   7 EHTADVIVVGAGPAGSTTAYYLAKAGLDVLLLE 39
Cdd:PRK12834    2 AMDADVIVVGAGLAGLVAAAELADAGKRVLLLD 34
PRK00711 PRK00711
D-amino acid dehydrogenase;
12-44 2.43e-04

D-amino acid dehydrogenase;


Pssm-ID: 234819 [Multi-domain]  Cd Length: 416  Bit Score: 43.25  E-value: 2.43e-04
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1072812961  12 VIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFP 44
Cdd:PRK00711    3 VVVLGSGVIGVTSAWYLAQAGHEVTVIDRQPGP 35
PRK12842 PRK12842
putative succinate dehydrogenase; Reviewed
 1-43 2.45e-04

putative succinate dehydrogenase; Reviewed


Pssm-ID: 237224 [Multi-domain]  Cd Length: 574  Bit Score: 43.14  E-value: 2.45e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1072812961   1 MTETLSEHTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAF 43
Cdd:PRK12842    1 EECMTNELTCDVLVIGSGAGGLSAAITARKLGLDVVVLEKEPV 43
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 12-40 2.76e-04

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 42.81  E-value: 2.76e-04
                          10        20
                  ....*....|....*....|....*....
gi 1072812961  12 VIVVGAGPAGSTTAYYLAKAGLDVLLLEK 40
Cdd:COG0493   124 VAVVGSGPAGLAAAYQLARAGHEVTVFEA 152
PRK06292 PRK06292
dihydrolipoamide dehydrogenase; Validated
 11-40 2.97e-04

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235774 [Multi-domain]  Cd Length: 460  Bit Score: 42.86  E-value: 2.97e-04
                          10        20        30
                  ....*....|....*....|....*....|
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 40
Cdd:PRK06292    5 DVIVIGAGPAGYVAARRAAKLGKKVALIEK 34
PRK07843 PRK07843
3-oxosteroid 1-dehydrogenase;
4-42 3.76e-04

3-oxosteroid 1-dehydrogenase;


Pssm-ID: 236111 [Multi-domain]  Cd Length: 557  Bit Score: 42.72  E-value: 3.76e-04
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1072812961   4 TLSEHTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTA 42
Cdd:PRK07843    2 AMTVQEYDVVVVGSGAAGMVAALTAAHRGLSTVVVEKAP 40
YhiN COG2081
Predicted flavoprotein YhiN [General function prediction only];
13-40 5.65e-04

Predicted flavoprotein YhiN [General function prediction only];


Pssm-ID: 441684 [Multi-domain]  Cd Length: 402  Bit Score: 41.96  E-value: 5.65e-04
                          10        20
                  ....*....|....*....|....*...
gi 1072812961  13 IVVGAGPAGSTTAYYLAKAGLDVLLLEK 40
Cdd:COG2081     1 IVIGAGAAGLMAAITAAERGARVLLLEK 28
NadB COG0029
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ...
 6-42 7.36e-04

Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 439800 [Multi-domain]  Cd Length: 521  Bit Score: 41.63  E-value: 7.36e-04
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 1072812961   6 SEHTADVIVVGAGPAGSTTAYYLAKAGlDVLLLEKTA 42
Cdd:COG0029     1 ERLKTDVLVIGSGIAGLSAALKLAERG-RVTLLTKGE 36
PRK07494 PRK07494
UbiH/UbiF family hydroxylase;
9-180 8.16e-04

UbiH/UbiF family hydroxylase;


Pssm-ID: 181001 [Multi-domain]  Cd Length: 388  Bit Score: 41.43  E-value: 8.16e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961   9 TADVIVVGAGPAGSTTAYYLAKAGLDVLLLektafprekvcgDGLTPRA---TKQLVAMGIDISEEAG-WSRNKG----- 79
Cdd:PRK07494    7 HTDIAVIGGGPAGLAAAIALARAGASVALV------------APEPPYAdlrTTALLGPSIRFLERLGlWARLAPhaapl 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  80 --LRIIGGGARLqLDWPELA-SYPDYGLvrkrDDFDEQLARQAQKAG--ARLYERCNVGEPVVEPRTGRITGVHAKLG-E 153
Cdd:PRK07494   75 qsMRIVDATGRL-IRAPEVRfRAAEIGE----DAFGYNIPNWLLNRAleARVAELPNITRFGDEAESVRPREDEVTVTlA 149

                         170       180
                  ....*....|....*....|....*..
gi 1072812961 154 DKTpvTFRAPLVVAADGNSSRLSLAMG 180
Cdd:PRK07494  150 DGT--TLSARLVVGADGRNSPVREAAG 174
PRK07233 PRK07233
hypothetical protein; Provisional
 14-44 1.15e-03

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 41.03  E-value: 1.15e-03
                          10        20        30
                  ....*....|....*....|....*....|.
gi 1072812961  14 VVGAGPAGSTTAYYLAKAGLDVLLLEKTAFP 44
Cdd:PRK07233    4 IVGGGIAGLAAAYRLAKRGHEVTVFEADDQL 34
PRK05714 PRK05714
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
 10-353 1.21e-03

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional


Pssm-ID: 168201 [Multi-domain]  Cd Length: 405  Bit Score: 40.97  E-value: 1.21e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  10 ADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDG-LTPRATKqLVAMGIDISEEAG-W--------SRNKG 79
Cdd:PRK05714    3 ADLLIVGAGMVGSALALALQGSGLEVLLLDGGPLSVKPFDPQApFEPRVSA-LSAASQRILERLGaWdgiaarraSPYSE 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  80 LRIIGGGARLQLDWPELASYPDY--GLVRKR---DDFDEQLARQAQK--AGARLYERCNVGEP-VVEPRTGRitgvhakl 151
Cdd:PRK05714   82 MQVWDGSGTGQIHFSAASVHAEVlgHIVENRvvqDALLERLHDSDIGllANARLEQMRRSGDDwLLTLADGR-------- 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 152 gedktpvTFRAPLVVAADGNSSrlslamglhrredrpmgvAVRTYFTTPRHDDDYLESWLeLWDRRGPGPDRllpGYGWI 231
Cdd:PRK05714  154 -------QLRAPLVVAADGANS------------------AVRRLAGCATREWDYLHHAI-VTSVRCSEPHR---ATAWQ 204

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 232 FGMGDGtsnvglgilnsSSAFRELDwREVLKAWCASMpedWGFTPDN------MTTPIRGAALPMAFN------------ 293
Cdd:PRK05714  205 RFTDDG-----------PLAFLPLE-RDGDEHWCSIV---WSTTPEEaerlmaLDDDAFCAALERAFEgrlgevlsadpr 269

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1072812961 294 -----RQPHYTR----GLLLVGDAGGLVNPFNGEGIAYAMESGQLAADVIVQAHARATDAQRERALHTY 353
Cdd:PRK05714  270 lcvplRQRHAKRyvepGLALIGDAAHTIHPLAGQGVNLGFLDAAVLAEVLLHAAERGERLADVRVLSRF 338
PRK05335 PRK05335
tRNA (uracil-5-)-methyltransferase Gid; Reviewed
 12-39 1.26e-03

tRNA (uracil-5-)-methyltransferase Gid; Reviewed


Pssm-ID: 235416  Cd Length: 436  Bit Score: 40.90  E-value: 1.26e-03
                          10        20
                  ....*....|....*....|....*...
gi 1072812961  12 VIVVGAGPAGSTTAYYLAKAGLDVLLLE 39
Cdd:PRK05335    5 VNVIGAGLAGSEAAWQLAKRGVPVELYE 32
PRK07804 PRK07804
L-aspartate oxidase; Provisional
 7-40 1.28e-03

L-aspartate oxidase; Provisional


Pssm-ID: 236102 [Multi-domain]  Cd Length: 541  Bit Score: 41.11  E-value: 1.28e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1072812961   7 EHTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 40
Cdd:PRK07804   14 RDAADVVVVGSGVAGLTAALAARRAGRRVLVVTK 47
COG3349 COG3349
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ...
 11-44 1.30e-03

Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];


Pssm-ID: 442577 [Multi-domain]  Cd Length: 445  Bit Score: 40.99  E-value: 1.30e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFP 44
Cdd:COG3349     5 RVVVVGGGLAGLAAAVELAEAGFRVTLLEARPRL 38
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
 12-68 1.35e-03

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 40.93  E-value: 1.35e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1072812961  12 VIVVGAGPAGSTTAYYLAKAGLDVLLLEKtafpREKVCG------------DGLTPRATKQLVAMGIDI 68
Cdd:PRK11749  143 VAVIGAGPAGLTAAHRLARKGYDVTIFEA----RDKAGGllrygipefrlpKDIVDREVERLLKLGVEI 207
PRK12814 PRK12814
putative NADPH-dependent glutamate synthase small subunit; Provisional
 12-68 1.38e-03

putative NADPH-dependent glutamate synthase small subunit; Provisional


Pssm-ID: 139246 [Multi-domain]  Cd Length: 652  Bit Score: 40.87  E-value: 1.38e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  12 VIVVGAGPAGSTTAYYLAKAGLDVLLLE---------KTAFPR----EKVCGDGLTPratkqLVAMGIDI 68
Cdd:PRK12814  196 VAIIGAGPAGLTAAYYLLRKGHDVTIFDaneqaggmmRYGIPRfrlpESVIDADIAP-----LRAMGAEF 260
PRK12844 PRK12844
3-ketosteroid-delta-1-dehydrogenase; Reviewed
 7-42 1.43e-03

3-ketosteroid-delta-1-dehydrogenase; Reviewed


Pssm-ID: 183787 [Multi-domain]  Cd Length: 557  Bit Score: 40.89  E-value: 1.43e-03
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 1072812961   7 EHTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTA 42
Cdd:PRK12844    4 DETYDVVVVGSGGGGMCAALAAADSGLEPLIVEKQD 39
PLN02976 PLN02976
amine oxidase
 12-58 1.91e-03

amine oxidase


Pssm-ID: 215527 [Multi-domain]  Cd Length: 1713  Bit Score: 40.62  E-value: 1.91e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 1072812961   12 VIVVGAGPAGSTTAYYLAKAGLDVLLLEKtafpREKVCGDGLTPRAT 58
Cdd:PLN02976   696 IIVVGAGPAGLTAARHLQRQGFSVTVLEA----RSRIGGRVYTDRSS 738
PRK05249 PRK05249
Si-specific NAD(P)(+) transhydrogenase;
11-40 1.94e-03

Si-specific NAD(P)(+) transhydrogenase;


Pssm-ID: 235373 [Multi-domain]  Cd Length: 461  Bit Score: 40.14  E-value: 1.94e-03
                          10        20        30
                  ....*....|....*....|....*....|
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 40
Cdd:PRK05249    7 DLVVIGSGPAGEGAAMQAAKLGKRVAVIER 36
PRK06847 PRK06847
hypothetical protein; Provisional
 11-201 2.24e-03

hypothetical protein; Provisional


Pssm-ID: 235874 [Multi-domain]  Cd Length: 375  Bit Score: 39.86  E-value: 2.24e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTafPREKVCGDGLTP-----RATKQLvamGI--DISEEAGWSRNKGLRII 83
Cdd:PRK06847    6 KVLIVGGGIGGLSAAIALRRAGIAVDLVEID--PEWRVYGAGITLqgnalRALREL---GVldECLEAGFGFDGVDLFDP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  84 GGGARLQLDWPELASyPDY----GLVRKRddFDEQLARQAQKAGARLYERCNVGEpvVEPRTGRITgvhaklgedktpVT 159
Cdd:PRK06847   81 DGTLLAELPTPRLAG-DDLpgggGIMRPA--LARILADAARAAGADVRLGTTVTA--IEQDDDGVT------------VT 143

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1072812961 160 F------RAPLVVAADGNSSRLSLAMGLHRREDRPMGVAV-RTYFttPR 201
Cdd:PRK06847  144 FsdgttgRYDLVVGADGLYSKVRSLVFPDEPEPEYTGQGVwRAVL--PR 190
PRK12409 PRK12409
D-amino acid dehydrogenase small subunit; Provisional
 12-44 2.96e-03

D-amino acid dehydrogenase small subunit; Provisional


Pssm-ID: 237093 [Multi-domain]  Cd Length: 410  Bit Score: 39.62  E-value: 2.96e-03
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1072812961  12 VIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFP 44
Cdd:PRK12409    4 IAVIGAGITGVTTAYALAQRGYQVTVFDRHRYA 36
TrmFO COG1206
Folate-dependent tRNA-U54 methylase TrmFO/GidA [Translation, ribosomal structure and ...
 11-39 3.15e-03

Folate-dependent tRNA-U54 methylase TrmFO/GidA [Translation, ribosomal structure and biogenesis]; Folate-dependent tRNA-U54 methylase TrmFO/GidA is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 440819  Cd Length: 436  Bit Score: 39.66  E-value: 3.15e-03
                          10        20
                  ....*....|....*....|....*....
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLE 39
Cdd:COG1206     3 PVTVIGGGLAGSEAAWQLAERGVPVRLYE 31
PRK06370 PRK06370
FAD-containing oxidoreductase;
11-63 3.28e-03

FAD-containing oxidoreductase;


Pssm-ID: 235787 [Multi-domain]  Cd Length: 463  Bit Score: 39.42  E-value: 3.28e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEktafpREKVCGD----GLTPraTKQLVA 63
Cdd:PRK06370    7 DAIVIGAGQAGPPLAARAAGLGMKVALIE-----RGLLGGTcvntGCVP--TKTLIA 56
carotene-cycl TIGR01790
lycopene cyclase family protein; This family includes lycopene beta and epsilion cyclases ...
 11-370 3.74e-03

lycopene cyclase family protein; This family includes lycopene beta and epsilion cyclases (which form beta and delta carotene, respectively) from bacteria and plants as well as the plant capsanthin/capsorubin and neoxanthin cyclases which appear to have evolved from the plant lycopene cyclases. The plant lycopene epsilon cyclases also transform neurosporene to alpha zeacarotene.


Pssm-ID: 130850 [Multi-domain]  Cd Length: 388  Bit Score: 39.34  E-value: 3.74e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDVLLLE---KTAFP-REKVCGDGLTpratkqlvAMGIDISEEAGWSrnKGLRIIGGG 86
Cdd:TIGR01790   1 DLAVIGGGPAGLAIALELARPGLRVQLIEphpPIPGNhTYGVWDDDLS--------DLGLADCVEHVWP--DVYEYRFPK 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  87 ARLQLDWPelasypdYGLVrKRDDFDEQLARQAQKAGARLYERCNVGepvVEPRTGRITGVHAKLGEdktpvTFRAPLVV 166
Cdd:TIGR01790  71 QPRKLGTA-------YGSV-DSTRLHEELLQKCPEGGVLWLERKAIH---AEADGVALSTVYCAGGQ-----RIQARLVI 134

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 167 AADGNSSRLSL-----------AMGLHRREDRP---MGVAVRTYFTTPRHDDDYLESWLELWDRRGP-GPDRLLPgygwi 231
Cdd:TIGR01790 135 DARGFGPLVQYvrfplnvgfqvAYGVEARLSRPphgPSSMVIMDARVDQLAAPELKGYRPTFLYAMPlGSTRVFI----- 209

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961 232 fgmgDGTSNVGLGILNSSSAFRELDWREVLKAWCASMP--EDWGFTPdnMTTPIrgaalpmafnrqPHYTRGLLLVGDAG 309
Cdd:TIGR01790 210 ----EETSLADRPALPRDRLRQRILARLNAQGWQIKTIeeEEWGALP--VGLPG------------PFLPQRVAAFGAAA 271

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1072812961 310 GLVNPFNGEGIAYAMESGQLAADVIVQAHARATDAQRERALHTYPQVLKDTyGGYYTLGRG 370
Cdd:TIGR01790 272 GMVHPTTGYSVARALSDAPGLAAAIAQALCQSSELATAAWDGLWPTERRRQ-RYFRLLGRM 331
PRK07121 PRK07121
FAD-binding protein;
8-42 4.35e-03

FAD-binding protein;


Pssm-ID: 180854 [Multi-domain]  Cd Length: 492  Bit Score: 39.10  E-value: 4.35e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1072812961   8 HTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTA 42
Cdd:PRK07121   19 DEADVVVVGFGAAGACAAIEAAAAGARVLVLERAA 53
PRK07364 PRK07364
FAD-dependent hydroxylase;
4-184 4.70e-03

FAD-dependent hydroxylase;


Pssm-ID: 236001 [Multi-domain]  Cd Length: 415  Bit Score: 39.23  E-value: 4.70e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961   4 TLSEHTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEktAFPREKVcgdgLTPRATKQLVAMGIDISEEAG-WSrnKGLRI 82
Cdd:PRK07364   13 STRSLTYDVAIVGGGIVGLTLAAALKDSGLRIALIE--AQPAEAA----AAKGQAYALSLLSARIFEGIGvWE--KILPQ 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072812961  83 IGGGARLQL-DwpelASYPdyGLVR-KRDDFDEQ-LARQAQKAG--ARLYERCNVGEPVVEPRTGRITGVHAK------- 150
Cdd:PRK07364   85 IGKFRQIRLsD----ADYP--GVVKfQPTDLGTEaLGYVGEHQVllEALQEFLQSCPNITWLCPAEVVSVEYQqdaatvt 158

                         170       180       190
                  ....*....|....*....|....*....|....
gi 1072812961 151 LGEDKTPVTFRAPLVVAADGNSSRLSLAMGLHRR 184
Cdd:PRK07364  159 LEIEGKQQTLQSKLVVAADGARSPIRQAAGIKTK 192
PRK15317 PRK15317
alkyl hydroperoxide reductase subunit F; Provisional
 11-35 5.05e-03

alkyl hydroperoxide reductase subunit F; Provisional


Pssm-ID: 237942 [Multi-domain]  Cd Length: 517  Bit Score: 38.99  E-value: 5.05e-03
                          10        20
                  ....*....|....*....|....*
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAGLDV 35
Cdd:PRK15317  213 DVLVVGGGPAGAAAAIYAARKGIRT 237
PRK12831 PRK12831
putative oxidoreductase; Provisional
 12-39 5.45e-03

putative oxidoreductase; Provisional


Pssm-ID: 183780 [Multi-domain]  Cd Length: 464  Bit Score: 38.85  E-value: 5.45e-03
                          10        20
                  ....*....|....*....|....*...
gi 1072812961  12 VIVVGAGPAGSTTAYYLAKAGLDVLLLE 39
Cdd:PRK12831  143 VAVIGSGPAGLTCAGDLAKMGYDVTIFE 170
PRK12771 PRK12771
putative glutamate synthase (NADPH) small subunit; Provisional
 12-40 5.87e-03

putative glutamate synthase (NADPH) small subunit; Provisional


Pssm-ID: 237198 [Multi-domain]  Cd Length: 564  Bit Score: 39.09  E-value: 5.87e-03
                          10        20
                  ....*....|....*....|....*....
gi 1072812961  12 VIVVGAGPAGSTTAYYLAKAGLDVLLLEK 40
Cdd:PRK12771  140 VAVIGGGPAGLSAAYHLRRMGHAVTIFEA 168
PLN02576 PLN02576
protoporphyrinogen oxidase
 6-50 6.23e-03

protoporphyrinogen oxidase


Pssm-ID: 215314 [Multi-domain]  Cd Length: 496  Bit Score: 38.84  E-value: 6.23e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1072812961   6 SEHTADVIVVGAGPAGSTTAYYLAKA-GLDVLLLEKtafpREKVCG 50
Cdd:PLN02576    9 AASSKDVAVVGAGVSGLAAAYALASKhGVNVLVTEA----RDRVGG 50
PRK11445 PRK11445
FAD-binding protein;
11-68 6.70e-03

FAD-binding protein;


Pssm-ID: 183139 [Multi-domain]  Cd Length: 351  Bit Score: 38.50  E-value: 6.70e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1072812961  11 DVIVVGAGPAGSTTAYYLAKAgLDVLLLEKTAF----PREKVCGDGLTPRATKQLVAMGIDI 68
Cdd:PRK11445    3 DVAIIGLGPAGSALARLLAGK-MKVIAIDKKHQcgteGFSKPCGGLLAPDAQKSFAKDGLTL 63
PRK07190 PRK07190
FAD-binding protein;
5-65 6.76e-03

FAD-binding protein;


Pssm-ID: 235955 [Multi-domain]  Cd Length: 487  Bit Score: 38.64  E-value: 6.76e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1072812961   5 LSEHTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRaTKQLVAMG 65
Cdd:PRK07190    1 MSTQVTDVVIIGAGPVGLMCAYLGQLCGLNTVIVDKSDGPLEVGRADALNAR-TLQLLELV 60
PRK08275 PRK08275
putative oxidoreductase; Provisional
 1-40 7.90e-03

putative oxidoreductase; Provisional


Pssm-ID: 181346 [Multi-domain]  Cd Length: 554  Bit Score: 38.49  E-value: 7.90e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1072812961   1 MTETLSEHTADVIVVGAGPAGSTTAY--YLAKAGLDVLLLEK 40
Cdd:PRK08275    1 DAMNTQEVETDILVIGGGTAGPMAAIkaKERNPALRVLLLEK 42
PRK13984 PRK13984
putative oxidoreductase; Provisional
 12-44 8.25e-03

putative oxidoreductase; Provisional


Pssm-ID: 172486 [Multi-domain]  Cd Length: 604  Bit Score: 38.59  E-value: 8.25e-03
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1072812961  12 VIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFP 44
Cdd:PRK13984  286 VAIVGSGPAGLSAAYFLATMGYEVTVYESLSKP 318
FadH2 COG0446
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ...
 12-68 8.81e-03

NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];


Pssm-ID: 440215 [Multi-domain]  Cd Length: 322  Bit Score: 37.87  E-value: 8.81e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1072812961  12 VIVVGAGPAGSTTAYYLAKAGLDVLLLEKTA--FPRekvCGDGLTPRATKQLVAMGIDI 68
Cdd:COG0446   127 AVVIGGGPIGLELAEALRKRGLKVTLVERAPrlLGV---LDPEMAALLEEELREHGVEL 182
gltD PRK12810
glutamate synthase subunit beta; Reviewed
 12-40 9.09e-03

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 38.22  E-value: 9.09e-03
                          10        20
                  ....*....|....*....|....*....
gi 1072812961  12 VIVVGAGPAGSTTAYYLAKAGLDVLLLEK 40
Cdd:PRK12810  146 VAVVGSGPAGLAAADQLARAGHKVTVFER 174
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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