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Conserved domains on  [gi|1070452064|gb|AOS04677|]
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polysaccharide biosynthesis protein GumF [Xanthomonas oryzae pv. oryzae]

Protein Classification

acyltransferase family protein( domain architecture ID 10007593)

acyltransferase family protein similar to Mesorhizobium japonicum nodulation protein NolL, which may act as an acetyltransferase that modifies the fucose of the nod factor

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
NolL COG3594
Fucose 4-O-acetylase or related acetyltransferase [Carbohydrate transport and metabolism];
10-289 1.72e-34

Fucose 4-O-acetylase or related acetyltransferase [Carbohydrate transport and metabolism];


:

Pssm-ID: 442813  Cd Length: 270  Bit Score: 127.39  E-value: 1.72e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070452064  10 TRDWQIDAAKAVAIALVVLGHASGMP-------PAYKLFAYSFHVPLFFVLSGWVGERFGQRalTGATVAKLGRTLLVPY 82
Cdd:COG3594     6 KRDPWIDNAKGILIILVVLGHAIGPLigdgdwlRALYLFIYSFHMPLFFFISGYFSKPSRNG--FKKFLKKKFKRLLVPY 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070452064  83 LAFFMVAYALWLLSAAMDGHAghpqtrplwhpltglLWANGSRLYVLPALWFLPALFVTMLAYIALRARLSAAAVAAISL 162
Cdd:COG3594    84 LIFQLIYSLFKFLVEGGEPLD---------------LSLLLLLLDPNGALWFLPALFVWRLLLPLLRRLRRWPLLIALAI 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070452064 163 TLALAWAGWfpslqLRLPLALDVLPVALFFIAIGGWLSRFA-EALRSLgaqvWALALLPLAAVWWWLAGWNGQVDVNNLQ 241
Cdd:COG3594   149 GLLAGYLPS-----IGLPLSLDRTLVFLPFFLLGYLLRKYHlERLRRL----RVLLLAVAVFLAAALLGFNRYLLLGSRS 219
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1070452064 242 FGQ--SAAVFLLVSLLGTAMTFCVAYFI-RGMRWVQWIGTNTLLILCTHTL 289
Cdd:COG3594   220 YGNwyGPLLRLLVALLGILLVLALLALLpRRRTWLTYLGRNTLYIYLLHGF 270
 
Name Accession Description Interval E-value
NolL COG3594
Fucose 4-O-acetylase or related acetyltransferase [Carbohydrate transport and metabolism];
10-289 1.72e-34

Fucose 4-O-acetylase or related acetyltransferase [Carbohydrate transport and metabolism];


Pssm-ID: 442813  Cd Length: 270  Bit Score: 127.39  E-value: 1.72e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070452064  10 TRDWQIDAAKAVAIALVVLGHASGMP-------PAYKLFAYSFHVPLFFVLSGWVGERFGQRalTGATVAKLGRTLLVPY 82
Cdd:COG3594     6 KRDPWIDNAKGILIILVVLGHAIGPLigdgdwlRALYLFIYSFHMPLFFFISGYFSKPSRNG--FKKFLKKKFKRLLVPY 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070452064  83 LAFFMVAYALWLLSAAMDGHAghpqtrplwhpltglLWANGSRLYVLPALWFLPALFVTMLAYIALRARLSAAAVAAISL 162
Cdd:COG3594    84 LIFQLIYSLFKFLVEGGEPLD---------------LSLLLLLLDPNGALWFLPALFVWRLLLPLLRRLRRWPLLIALAI 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070452064 163 TLALAWAGWfpslqLRLPLALDVLPVALFFIAIGGWLSRFA-EALRSLgaqvWALALLPLAAVWWWLAGWNGQVDVNNLQ 241
Cdd:COG3594   149 GLLAGYLPS-----IGLPLSLDRTLVFLPFFLLGYLLRKYHlERLRRL----RVLLLAVAVFLAAALLGFNRYLLLGSRS 219
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1070452064 242 FGQ--SAAVFLLVSLLGTAMTFCVAYFI-RGMRWVQWIGTNTLLILCTHTL 289
Cdd:COG3594   220 YGNwyGPLLRLLVALLGILLVLALLALLpRRRTWLTYLGRNTLYIYLLHGF 270
Acyl_transf_3 pfam01757
Acyltransferase family; This family includes a range of acyltransferase enzymes. This domain ...
15-327 6.79e-10

Acyltransferase family; This family includes a range of acyltransferase enzymes. This domain is found in a wide range of acyltransferase enzymes, including, mainly, bacterial proteins which catalyze the transfer of acyl groups, other than amino-acyl, from one compound to another, such as Glucans biosynthesis protein C (OPGC) or protein OatA from Listeria monocytogenes serovar 1/2a and Staphylococcus aureus, an integral membrane protein which is responsible for O-acetylation at the C6-hydroxyl group of N-acetylmuramyl residues, forming the corresponding N,6-O-diacetylmuramic acid of the peptidoglycan, a modification that determines lysozyme resistance. This domain is also present in eukaryotic proteins, namely O-acyltransferase like protein (OACYL) from mouse and RHY1 (Regulator of hypoxia-inducible factor 1) and NRF6 (Nose resistant to fluoxetine protein 6) from Caenorhabditis elegans.


Pssm-ID: 426413 [Multi-domain]  Cd Length: 330  Bit Score: 59.49  E-value: 6.79e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070452064  15 IDAAKAVAIALVVLGHASGMPPAYK------------LFAYSFHVPLFFVLSGWV--GERFGQRALTGATVAKLGRtLLV 80
Cdd:pfam01757   4 LDLLRGIAILLVVIGHVLLAFGYGGfglplelallflVFLGRFGVPLFFFISGYLlaALRRRRRSLFKFIKKRLLR-LLI 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070452064  81 PYLAFFMVAYALWLLSAamdghagHPQTRPLWHPLTGLLWANGSRLYVLPALWFLPALFVTMLAY---IALRARLSAAAV 157
Cdd:pfam01757  83 PYLLWSLLYALLLLLVA-------GLSVGGALLLLLLLNNGPLFFLGVNGHLWFLSALFVFYLLLpllLRLLRKLKKSLL 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070452064 158 AAISLTLALAWAGWFPSLQLRLPLALDVLPV--ALFFIAIGGWLSRFAEALRSLGAQVWALALLPLAAV---WWWLAGWN 232
Cdd:pfam01757 156 LLLLLLLLLLFLLYILILLVGVPFTVLVLFIflYLPFFLLGALLARYRKRIRSKRLKLLIIILLALALLaliLLLLFLFG 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070452064 233 GQVDVNNLQFGQSAAVFLLVSLLGTAMTFCVAYFIRGMRWVQWIGTNTLLILCTHTLVFLVATSVVARTGLIarsaIGTP 312
Cdd:pfam01757 236 LDPLALEFYGYPSLLLLLLGILLLLLLALLLANLRSLRRLLSYLGKYSFGIYLIHPPILLLLGKLLGLLGLP----LLPI 311
                         330
                  ....*....|....*
gi 1070452064 313 AWALGLSAFAITMSV 327
Cdd:pfam01757 312 LLFLLLLVLTLLVSV 326
 
Name Accession Description Interval E-value
NolL COG3594
Fucose 4-O-acetylase or related acetyltransferase [Carbohydrate transport and metabolism];
10-289 1.72e-34

Fucose 4-O-acetylase or related acetyltransferase [Carbohydrate transport and metabolism];


Pssm-ID: 442813  Cd Length: 270  Bit Score: 127.39  E-value: 1.72e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070452064  10 TRDWQIDAAKAVAIALVVLGHASGMP-------PAYKLFAYSFHVPLFFVLSGWVGERFGQRalTGATVAKLGRTLLVPY 82
Cdd:COG3594     6 KRDPWIDNAKGILIILVVLGHAIGPLigdgdwlRALYLFIYSFHMPLFFFISGYFSKPSRNG--FKKFLKKKFKRLLVPY 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070452064  83 LAFFMVAYALWLLSAAMDGHAghpqtrplwhpltglLWANGSRLYVLPALWFLPALFVTMLAYIALRARLSAAAVAAISL 162
Cdd:COG3594    84 LIFQLIYSLFKFLVEGGEPLD---------------LSLLLLLLDPNGALWFLPALFVWRLLLPLLRRLRRWPLLIALAI 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070452064 163 TLALAWAGWfpslqLRLPLALDVLPVALFFIAIGGWLSRFA-EALRSLgaqvWALALLPLAAVWWWLAGWNGQVDVNNLQ 241
Cdd:COG3594   149 GLLAGYLPS-----IGLPLSLDRTLVFLPFFLLGYLLRKYHlERLRRL----RVLLLAVAVFLAAALLGFNRYLLLGSRS 219
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1070452064 242 FGQ--SAAVFLLVSLLGTAMTFCVAYFI-RGMRWVQWIGTNTLLILCTHTL 289
Cdd:COG3594   220 YGNwyGPLLRLLVALLGILLVLALLALLpRRRTWLTYLGRNTLYIYLLHGF 270
Acyl_transf_3 pfam01757
Acyltransferase family; This family includes a range of acyltransferase enzymes. This domain ...
15-327 6.79e-10

Acyltransferase family; This family includes a range of acyltransferase enzymes. This domain is found in a wide range of acyltransferase enzymes, including, mainly, bacterial proteins which catalyze the transfer of acyl groups, other than amino-acyl, from one compound to another, such as Glucans biosynthesis protein C (OPGC) or protein OatA from Listeria monocytogenes serovar 1/2a and Staphylococcus aureus, an integral membrane protein which is responsible for O-acetylation at the C6-hydroxyl group of N-acetylmuramyl residues, forming the corresponding N,6-O-diacetylmuramic acid of the peptidoglycan, a modification that determines lysozyme resistance. This domain is also present in eukaryotic proteins, namely O-acyltransferase like protein (OACYL) from mouse and RHY1 (Regulator of hypoxia-inducible factor 1) and NRF6 (Nose resistant to fluoxetine protein 6) from Caenorhabditis elegans.


Pssm-ID: 426413 [Multi-domain]  Cd Length: 330  Bit Score: 59.49  E-value: 6.79e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070452064  15 IDAAKAVAIALVVLGHASGMPPAYK------------LFAYSFHVPLFFVLSGWV--GERFGQRALTGATVAKLGRtLLV 80
Cdd:pfam01757   4 LDLLRGIAILLVVIGHVLLAFGYGGfglplelallflVFLGRFGVPLFFFISGYLlaALRRRRRSLFKFIKKRLLR-LLI 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070452064  81 PYLAFFMVAYALWLLSAamdghagHPQTRPLWHPLTGLLWANGSRLYVLPALWFLPALFVTMLAY---IALRARLSAAAV 157
Cdd:pfam01757  83 PYLLWSLLYALLLLLVA-------GLSVGGALLLLLLLNNGPLFFLGVNGHLWFLSALFVFYLLLpllLRLLRKLKKSLL 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070452064 158 AAISLTLALAWAGWFPSLQLRLPLALDVLPV--ALFFIAIGGWLSRFAEALRSLGAQVWALALLPLAAV---WWWLAGWN 232
Cdd:pfam01757 156 LLLLLLLLLLFLLYILILLVGVPFTVLVLFIflYLPFFLLGALLARYRKRIRSKRLKLLIIILLALALLaliLLLLFLFG 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070452064 233 GQVDVNNLQFGQSAAVFLLVSLLGTAMTFCVAYFIRGMRWVQWIGTNTLLILCTHTLVFLVATSVVARTGLIarsaIGTP 312
Cdd:pfam01757 236 LDPLALEFYGYPSLLLLLLGILLLLLLALLLANLRSLRRLLSYLGKYSFGIYLIHPPILLLLGKLLGLLGLP----LLPI 311
                         330
                  ....*....|....*
gi 1070452064 313 AWALGLSAFAITMSV 327
Cdd:pfam01757 312 LLFLLLLVLTLLVSV 326
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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