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Conserved domains on  [gi|1046311716|gb|ANV75304|]
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Putative phosphate transport regulator [Acetivibrio thermocellus DSM 2360]

Protein Classification

DUF47 domain-containing protein( domain architecture ID 11443566)

DUF47 domain-containing protein may function as a phosphate transport regulator, similar to Bacillus subtilis UPF0111 protein YkaA

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
YkaA COG1392
Phosphate transport regulator YkaA, distantly related to PhoU, UPF0111/DUF47 family [Inorganic ...
4-207 2.88e-59

Phosphate transport regulator YkaA, distantly related to PhoU, UPF0111/DUF47 family [Inorganic ion transport and metabolism];


:

Pssm-ID: 441002 [Multi-domain]  Cd Length: 205  Bit Score: 184.69  E-value: 2.88e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046311716   4 KKDSYYFDTFVELVNYSCQAANLLNQIMNNFkaEELPEKMKEMHDIEHSGDQARHVMIRKLAKEFITPIEREDIMALADA 83
Cdd:COG1392     3 PKEKSFFDLLEEHAEKVVEAAELLVELLEDY--EDVEELAEEIKELEHEADEIKREIREELNKTFITPFDREDILELASA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046311716  84 IDNVTDAIEDVVMRMYMYNITSIRPQAVKMTEIIVKCCNSLKTALGEFINF-RKSQNLHQFIIEVNQLEEEGDRLFTEAT 162
Cdd:COG1392    81 LDDIADYIEDIAGRLVLYKIEELDEELLELAELLVEAAEELVEAVKELRELlKKAEEVLELIIEINRLENEADDLYREAL 160
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1046311716 163 RDLYCNCNDFREVAAWDTTFHYLEKCCDACEDVADAIENVIMKNS 207
Cdd:COG1392   161 AKLFESEKDPIEVIKLKEIYELLEDIADRCEDVADRLEIIVLKNA 205
 
Name Accession Description Interval E-value
YkaA COG1392
Phosphate transport regulator YkaA, distantly related to PhoU, UPF0111/DUF47 family [Inorganic ...
4-207 2.88e-59

Phosphate transport regulator YkaA, distantly related to PhoU, UPF0111/DUF47 family [Inorganic ion transport and metabolism];


Pssm-ID: 441002 [Multi-domain]  Cd Length: 205  Bit Score: 184.69  E-value: 2.88e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046311716   4 KKDSYYFDTFVELVNYSCQAANLLNQIMNNFkaEELPEKMKEMHDIEHSGDQARHVMIRKLAKEFITPIEREDIMALADA 83
Cdd:COG1392     3 PKEKSFFDLLEEHAEKVVEAAELLVELLEDY--EDVEELAEEIKELEHEADEIKREIREELNKTFITPFDREDILELASA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046311716  84 IDNVTDAIEDVVMRMYMYNITSIRPQAVKMTEIIVKCCNSLKTALGEFINF-RKSQNLHQFIIEVNQLEEEGDRLFTEAT 162
Cdd:COG1392    81 LDDIADYIEDIAGRLVLYKIEELDEELLELAELLVEAAEELVEAVKELRELlKKAEEVLELIIEINRLENEADDLYREAL 160
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1046311716 163 RDLYCNCNDFREVAAWDTTFHYLEKCCDACEDVADAIENVIMKNS 207
Cdd:COG1392   161 AKLFESEKDPIEVIKLKEIYELLEDIADRCEDVADRLEIIVLKNA 205
PhoU_div pfam01865
Protein of unknown function DUF47; This family includes prokaryotic proteins of unknown ...
10-205 1.14e-12

Protein of unknown function DUF47; This family includes prokaryotic proteins of unknown function, as well as a protein annotated as the pit accessory protein from Sinorhizobium meliloti. However, the function of this protein is also unknown (Pit stands for Phosphate transport). It is probably distantly related to pfam01895 (personal obs:Yeats C).


Pssm-ID: 280106  Cd Length: 214  Bit Score: 64.33  E-value: 1.14e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046311716  10 FDTFVELVNYSCQAANLLNQIMNNFKA---EELPEKMKEMHDIEHSGDQARHVMIRKLAKEFITPIEREDIMALADAIDN 86
Cdd:pfam01865  10 EKSLQDHLEKVSETVLKLIELFKALLEgdyEDVEELRKEISELEREADEIKREIRLNLRRGAFLPFDRGDLLELIESQDD 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046311716  87 VTDAIEDVVMRMYMYNIT---SIRPQ-------AVKMTEIIVKCCNSLKTALGEfiNFRKSQNLHqfiiEVNQLEEEGDR 156
Cdd:pfam01865  90 ILDMLEDIAMLYTLRKFEfpeEFRDEflamlkkTVEAAHLLAEAIEELERLLEG--AFRGSDIVE----EIKHLEDEIDQ 163
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1046311716 157 LFTEATRDLYCNCN--DFREVAAWDTTFHYLEKCCDACEDVADAIENVIMK 205
Cdd:pfam01865 164 LQRKLIKKLFNREDasNPMEFIILSEIIEKLGNVSDRAEDVADRISIILLE 214
TIGR00153 TIGR00153
TIGR00153 family protein; An apparent homolog with a suggested function is Pit accessory ...
37-98 7.30e-05

TIGR00153 family protein; An apparent homolog with a suggested function is Pit accessory protein from Sinorhizobium meliloti, which may be involved in phosphate (Pi) transport. [Hypothetical proteins, Conserved]


Pssm-ID: 272932  Cd Length: 216  Bit Score: 42.02  E-value: 7.30e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1046311716  37 EELPEKMKEMHDIEHSGDQARHVMIRKLAKEFITPIEREDIMALADAIDNVTDAIEDVVMRM 98
Cdd:TIGR00153  43 EKDEELRKEIIEIEHEADEIKREIRLNLEKGAFLPNDRRDLLELAELLDEILDSLEHAAMLY 104
 
Name Accession Description Interval E-value
YkaA COG1392
Phosphate transport regulator YkaA, distantly related to PhoU, UPF0111/DUF47 family [Inorganic ...
4-207 2.88e-59

Phosphate transport regulator YkaA, distantly related to PhoU, UPF0111/DUF47 family [Inorganic ion transport and metabolism];


Pssm-ID: 441002 [Multi-domain]  Cd Length: 205  Bit Score: 184.69  E-value: 2.88e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046311716   4 KKDSYYFDTFVELVNYSCQAANLLNQIMNNFkaEELPEKMKEMHDIEHSGDQARHVMIRKLAKEFITPIEREDIMALADA 83
Cdd:COG1392     3 PKEKSFFDLLEEHAEKVVEAAELLVELLEDY--EDVEELAEEIKELEHEADEIKREIREELNKTFITPFDREDILELASA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046311716  84 IDNVTDAIEDVVMRMYMYNITSIRPQAVKMTEIIVKCCNSLKTALGEFINF-RKSQNLHQFIIEVNQLEEEGDRLFTEAT 162
Cdd:COG1392    81 LDDIADYIEDIAGRLVLYKIEELDEELLELAELLVEAAEELVEAVKELRELlKKAEEVLELIIEINRLENEADDLYREAL 160
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1046311716 163 RDLYCNCNDFREVAAWDTTFHYLEKCCDACEDVADAIENVIMKNS 207
Cdd:COG1392   161 AKLFESEKDPIEVIKLKEIYELLEDIADRCEDVADRLEIIVLKNA 205
PhoU_div pfam01865
Protein of unknown function DUF47; This family includes prokaryotic proteins of unknown ...
10-205 1.14e-12

Protein of unknown function DUF47; This family includes prokaryotic proteins of unknown function, as well as a protein annotated as the pit accessory protein from Sinorhizobium meliloti. However, the function of this protein is also unknown (Pit stands for Phosphate transport). It is probably distantly related to pfam01895 (personal obs:Yeats C).


Pssm-ID: 280106  Cd Length: 214  Bit Score: 64.33  E-value: 1.14e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046311716  10 FDTFVELVNYSCQAANLLNQIMNNFKA---EELPEKMKEMHDIEHSGDQARHVMIRKLAKEFITPIEREDIMALADAIDN 86
Cdd:pfam01865  10 EKSLQDHLEKVSETVLKLIELFKALLEgdyEDVEELRKEISELEREADEIKREIRLNLRRGAFLPFDRGDLLELIESQDD 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046311716  87 VTDAIEDVVMRMYMYNIT---SIRPQ-------AVKMTEIIVKCCNSLKTALGEfiNFRKSQNLHqfiiEVNQLEEEGDR 156
Cdd:pfam01865  90 ILDMLEDIAMLYTLRKFEfpeEFRDEflamlkkTVEAAHLLAEAIEELERLLEG--AFRGSDIVE----EIKHLEDEIDQ 163
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1046311716 157 LFTEATRDLYCNCN--DFREVAAWDTTFHYLEKCCDACEDVADAIENVIMK 205
Cdd:pfam01865 164 LQRKLIKKLFNREDasNPMEFIILSEIIEKLGNVSDRAEDVADRISIILLE 214
TIGR00153 TIGR00153
TIGR00153 family protein; An apparent homolog with a suggested function is Pit accessory ...
37-98 7.30e-05

TIGR00153 family protein; An apparent homolog with a suggested function is Pit accessory protein from Sinorhizobium meliloti, which may be involved in phosphate (Pi) transport. [Hypothetical proteins, Conserved]


Pssm-ID: 272932  Cd Length: 216  Bit Score: 42.02  E-value: 7.30e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1046311716  37 EELPEKMKEMHDIEHSGDQARHVMIRKLAKEFITPIEREDIMALADAIDNVTDAIEDVVMRM 98
Cdd:TIGR00153  43 EKDEELRKEIIEIEHEADEIKREIRLNLEKGAFLPNDRRDLLELAELLDEILDSLEHAAMLY 104
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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