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Conserved domains on  [gi|1044984804|gb|ANU22364|]
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octanoyltransferase [Planococcus donghaensis]

Protein Classification

biotin/lipoate A/B protein ligase family protein( domain architecture ID 10000572)

biotin/lipoate A/B protein ligase family protein is responsible for attaching biotin and lipoic acid to a specific lysine at the active site of biotin and lipoate-dependent enzymes, respectively

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
LplA COG0095
Lipoate-protein ligase A [Coenzyme transport and metabolism]; Lipoate-protein ligase A is part ...
11-253 1.06e-59

Lipoate-protein ligase A [Coenzyme transport and metabolism]; Lipoate-protein ligase A is part of the Pathway/BioSystem: Lipoate biosynthesis


:

Pssm-ID: 439865  Cd Length: 246  Bit Score: 189.68  E-value: 1.06e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1044984804  11 RFWDQslsaKSRSALESFAADDTLCELVGSGKSAPTIRTWVHDDTVVLGIQDHRLPHIEkgMDVLKDHGFTPIVRNSGGL 90
Cdd:COG0095     1 RLIDS----GSTDPAFNLALDEALLEEVAEGEDPPTLRLWRNPPTVVIGRFQNVLPEVN--LEYVEEHGIPVVRRISGGG 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1044984804  91 AVVLDAGVLNISLVLSEKDNAIDISAGYDLMLELVRELFPEATIEAyEIVgsycpGSYDLSINGQKFAGISQRRIRRGIA 170
Cdd:COG0095    75 AVYHDPGNLNYSLILPEDDVPLSIEESYRKLLEPILEALRKLGVDA-EFS-----GRNDIVVDGRKISGNAQRRRKGAVL 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1044984804 171 VQVYLCVEGSGAQRAEIIRDFYNAGLQneetkFTYPEIKPETmASLSELLGRKITVQEVV---ID-LHDLMGGPTPMSLQ 246
Cdd:COG0095   149 HHGTLLVDGDLEKLAKVLRVPYEKLRD-----KGIKSVRSRV-TNLSELLGTDITREEVKealLEaFAEVLGVLEPGELT 222

                  ....*..
gi 1044984804 247 PDETELY 253
Cdd:COG0095   223 DEELEAA 229
 
Name Accession Description Interval E-value
LplA COG0095
Lipoate-protein ligase A [Coenzyme transport and metabolism]; Lipoate-protein ligase A is part ...
11-253 1.06e-59

Lipoate-protein ligase A [Coenzyme transport and metabolism]; Lipoate-protein ligase A is part of the Pathway/BioSystem: Lipoate biosynthesis


Pssm-ID: 439865  Cd Length: 246  Bit Score: 189.68  E-value: 1.06e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1044984804  11 RFWDQslsaKSRSALESFAADDTLCELVGSGKSAPTIRTWVHDDTVVLGIQDHRLPHIEkgMDVLKDHGFTPIVRNSGGL 90
Cdd:COG0095     1 RLIDS----GSTDPAFNLALDEALLEEVAEGEDPPTLRLWRNPPTVVIGRFQNVLPEVN--LEYVEEHGIPVVRRISGGG 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1044984804  91 AVVLDAGVLNISLVLSEKDNAIDISAGYDLMLELVRELFPEATIEAyEIVgsycpGSYDLSINGQKFAGISQRRIRRGIA 170
Cdd:COG0095    75 AVYHDPGNLNYSLILPEDDVPLSIEESYRKLLEPILEALRKLGVDA-EFS-----GRNDIVVDGRKISGNAQRRRKGAVL 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1044984804 171 VQVYLCVEGSGAQRAEIIRDFYNAGLQneetkFTYPEIKPETmASLSELLGRKITVQEVV---ID-LHDLMGGPTPMSLQ 246
Cdd:COG0095   149 HHGTLLVDGDLEKLAKVLRVPYEKLRD-----KGIKSVRSRV-TNLSELLGTDITREEVKealLEaFAEVLGVLEPGELT 222

                  ....*..
gi 1044984804 247 PDETELY 253
Cdd:COG0095   223 DEELEAA 229
LplA cd16443
lipoate-protein ligase; Lipoate-protein ligase A (LplA) catalyzes the formation of an amide ...
10-229 6.77e-46

lipoate-protein ligase; Lipoate-protein ligase A (LplA) catalyzes the formation of an amide linkage between free lipoic acid and a specific lysine residue of the lipoyl domain in lipoate dependent enzymes, similar to the biotinylation reaction mediated by biotinyl protein ligase (BPL). The two step reaction includes activation of exogenously supplied lipoic acid at the expense of ATP to lipoyl-AMP and then transfer to the epsilon-amino group of a specific lysine residue of the lipoyl domain of the target protein.


Pssm-ID: 319742  Cd Length: 209  Bit Score: 153.18  E-value: 6.77e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1044984804  10 WRFwdqsLSAKSRSALESFAADDTLCELVgSGKSAPTIRTWVHDDTVVLGIQDHRLPHIEkgMDVLKDHGFTPIVRNSGG 89
Cdd:cd16443     1 MRL----IDSSGDPPAENLALDEALLRSV-AAPPTLRLYLWQNPPTVVIGRFQNPLEEVN--LEYAEEDGIPVVRRPSGG 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1044984804  90 LAVVLDAGVLNISLVLSEKDNAIDISagYDLMLELV----RELFPEATIEAyeivgsycPGSYDLSINGQKFAGISQRRI 165
Cdd:cd16443    74 GAVFHDLGNLNYSLILPKEHPSIDES--YRALSQPVikalRKLGVEAEFGG--------VGRNDLVVGGKKISGSAQRRT 143
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1044984804 166 RRGIAVQVYLCVEGSGAQRAEIIRDFYNAGLQNEetkftyPEIKPETMASLSELLGRKITVQEV 229
Cdd:cd16443   144 KGRILHHGTLLVDVDLEKLARVLNVPYEKLKSKG------PKSVRSRVTNLSELLGRDITVEEV 201
BPL_LplA_LipB pfam03099
Biotin/lipoate A/B protein ligase family; This family includes biotin protein ligase, ...
68-177 1.27e-12

Biotin/lipoate A/B protein ligase family; This family includes biotin protein ligase, lipoate-protein ligase A and B. Biotin is covalently attached at the active site of certain enzymes that transfer carbon dioxide from bicarbonate to organic acids to form cellular metabolites. Biotin protein ligase (BPL) is the enzyme responsible for attaching biotin to a specific lysine at the active site of biotin enzymes. Each organizm probably has only one BPL. Biotin attachment is a two step reaction that results in the formation of an amide linkage between the carboxyl group of biotin and the epsilon-amino group of the modified lysine. Lipoate-protein ligase A (LPLA) catalyzes the formation of an amide linkage between lipoic acid and a specific lysine residue in lipoate dependent enzymes. The unusual biosynthesis pathway of lipoic acid is mechanistically intertwined with attachment of the cofactor.


Pssm-ID: 427135  Cd Length: 132  Bit Score: 63.62  E-value: 1.27e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1044984804  68 IEKGMDVLKDHGFTP--------IVRNSGGL----AVVLDA-GVLNISLVLSEKDNAIDISAGYDLMLELVRELFPEATI 134
Cdd:pfam03099   5 IKSTNTYLEELNSSElesggvvvVRRQTGGRgrggNVWHSPkGCLTYSLLLSKEHPNVDPSVLEFYVLELVLAVLEALGL 84
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1044984804 135 EAYEIVGSYCP--GSYDLSINGQKFAGISQRRIRRGIAVQVYLCV 177
Cdd:pfam03099  85 YKPGISGIPCFvkWPNDLYVNGRKLAGILQRSTRGGTLHHGVIGL 129
 
Name Accession Description Interval E-value
LplA COG0095
Lipoate-protein ligase A [Coenzyme transport and metabolism]; Lipoate-protein ligase A is part ...
11-253 1.06e-59

Lipoate-protein ligase A [Coenzyme transport and metabolism]; Lipoate-protein ligase A is part of the Pathway/BioSystem: Lipoate biosynthesis


Pssm-ID: 439865  Cd Length: 246  Bit Score: 189.68  E-value: 1.06e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1044984804  11 RFWDQslsaKSRSALESFAADDTLCELVGSGKSAPTIRTWVHDDTVVLGIQDHRLPHIEkgMDVLKDHGFTPIVRNSGGL 90
Cdd:COG0095     1 RLIDS----GSTDPAFNLALDEALLEEVAEGEDPPTLRLWRNPPTVVIGRFQNVLPEVN--LEYVEEHGIPVVRRISGGG 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1044984804  91 AVVLDAGVLNISLVLSEKDNAIDISAGYDLMLELVRELFPEATIEAyEIVgsycpGSYDLSINGQKFAGISQRRIRRGIA 170
Cdd:COG0095    75 AVYHDPGNLNYSLILPEDDVPLSIEESYRKLLEPILEALRKLGVDA-EFS-----GRNDIVVDGRKISGNAQRRRKGAVL 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1044984804 171 VQVYLCVEGSGAQRAEIIRDFYNAGLQneetkFTYPEIKPETmASLSELLGRKITVQEVV---ID-LHDLMGGPTPMSLQ 246
Cdd:COG0095   149 HHGTLLVDGDLEKLAKVLRVPYEKLRD-----KGIKSVRSRV-TNLSELLGTDITREEVKealLEaFAEVLGVLEPGELT 222

                  ....*..
gi 1044984804 247 PDETELY 253
Cdd:COG0095   223 DEELEAA 229
LplA cd16443
lipoate-protein ligase; Lipoate-protein ligase A (LplA) catalyzes the formation of an amide ...
10-229 6.77e-46

lipoate-protein ligase; Lipoate-protein ligase A (LplA) catalyzes the formation of an amide linkage between free lipoic acid and a specific lysine residue of the lipoyl domain in lipoate dependent enzymes, similar to the biotinylation reaction mediated by biotinyl protein ligase (BPL). The two step reaction includes activation of exogenously supplied lipoic acid at the expense of ATP to lipoyl-AMP and then transfer to the epsilon-amino group of a specific lysine residue of the lipoyl domain of the target protein.


Pssm-ID: 319742  Cd Length: 209  Bit Score: 153.18  E-value: 6.77e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1044984804  10 WRFwdqsLSAKSRSALESFAADDTLCELVgSGKSAPTIRTWVHDDTVVLGIQDHRLPHIEkgMDVLKDHGFTPIVRNSGG 89
Cdd:cd16443     1 MRL----IDSSGDPPAENLALDEALLRSV-AAPPTLRLYLWQNPPTVVIGRFQNPLEEVN--LEYAEEDGIPVVRRPSGG 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1044984804  90 LAVVLDAGVLNISLVLSEKDNAIDISagYDLMLELV----RELFPEATIEAyeivgsycPGSYDLSINGQKFAGISQRRI 165
Cdd:cd16443    74 GAVFHDLGNLNYSLILPKEHPSIDES--YRALSQPVikalRKLGVEAEFGG--------VGRNDLVVGGKKISGSAQRRT 143
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1044984804 166 RRGIAVQVYLCVEGSGAQRAEIIRDFYNAGLQNEetkftyPEIKPETMASLSELLGRKITVQEV 229
Cdd:cd16443   144 KGRILHHGTLLVDVDLEKLARVLNVPYEKLKSKG------PKSVRSRVTNLSELLGRDITVEEV 201
BPL_LplA_LipB cd16435
biotin-lipoate ligase family; This family includes biotin protein ligase (BPL), ...
41-229 2.57e-22

biotin-lipoate ligase family; This family includes biotin protein ligase (BPL), lipoate-protein ligase A (LplA) and octanoyl-[acyl carrier protein]-protein acyltransferase (LipB). Biotin is covalently attached at the active site of certain enzymes that transfer carbon dioxide from bicarbonate to organic acids to form cellular metabolites. Biotin protein ligase (BPL) is the enzyme responsible for attaching biotin to a specific lysine at the active site of biotin enzymes. Biotin attachment is a two step reaction that results in the formation of an amide linkage between the carboxyl group of biotin and the epsilon-amino group of the modified lysine. Lipoate-protein ligase A (LplA) catalyses the formation of an amide linkage between lipoic acid and a specific lysine residue in lipoate dependent enzymes.


Pssm-ID: 319740  Cd Length: 198  Bit Score: 91.44  E-value: 2.57e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1044984804  41 GKSAPTIRTWVHDDTVVLGIQDHRLPHIEkgMDVLKDHGFTPIVRNSGGLAVVLDAGVLNISLVLSeKDNAIDISAGYDL 120
Cdd:cd16435    26 SNQSSTLLLWEHPTTVTLGRLDRELPHLE--LAKKIERGYELVVRNRGGRAVSHDPGQLVFSPVIG-PNVEFMISKFNLI 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1044984804 121 MLELVRELFPEATIEAYEIvgsycPGSYDLSINGQKFAGISQRRIRRGIAVQVYLCVEGSGAQRAEIIRDFYnaglqnee 200
Cdd:cd16435   103 IEEGIRDAIADFGQSAEVK-----WGRNDLWIDNRKVCGIAVRVVKEAIFHGIALNLNQDLENFTEIIPCGY-------- 169
                         170       180
                  ....*....|....*....|....*....
gi 1044984804 201 tkftypeiKPETMASLSELLGRKITVQEV 229
Cdd:cd16435   170 --------KPERVTSLSLELGRKVTVEQV 190
BPL_LplA_LipB pfam03099
Biotin/lipoate A/B protein ligase family; This family includes biotin protein ligase, ...
68-177 1.27e-12

Biotin/lipoate A/B protein ligase family; This family includes biotin protein ligase, lipoate-protein ligase A and B. Biotin is covalently attached at the active site of certain enzymes that transfer carbon dioxide from bicarbonate to organic acids to form cellular metabolites. Biotin protein ligase (BPL) is the enzyme responsible for attaching biotin to a specific lysine at the active site of biotin enzymes. Each organizm probably has only one BPL. Biotin attachment is a two step reaction that results in the formation of an amide linkage between the carboxyl group of biotin and the epsilon-amino group of the modified lysine. Lipoate-protein ligase A (LPLA) catalyzes the formation of an amide linkage between lipoic acid and a specific lysine residue in lipoate dependent enzymes. The unusual biosynthesis pathway of lipoic acid is mechanistically intertwined with attachment of the cofactor.


Pssm-ID: 427135  Cd Length: 132  Bit Score: 63.62  E-value: 1.27e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1044984804  68 IEKGMDVLKDHGFTP--------IVRNSGGL----AVVLDA-GVLNISLVLSEKDNAIDISAGYDLMLELVRELFPEATI 134
Cdd:pfam03099   5 IKSTNTYLEELNSSElesggvvvVRRQTGGRgrggNVWHSPkGCLTYSLLLSKEHPNVDPSVLEFYVLELVLAVLEALGL 84
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1044984804 135 EAYEIVGSYCP--GSYDLSINGQKFAGISQRRIRRGIAVQVYLCV 177
Cdd:pfam03099  85 YKPGISGIPCFvkWPNDLYVNGRKLAGILQRSTRGGTLHHGVIGL 129
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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