|
Name |
Accession |
Description |
Interval |
E-value |
| UgpE |
COG0395 |
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ... |
2-278 |
3.24e-76 |
|
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440164 [Multi-domain] Cd Length: 282 Bit Score: 233.45 E-value: 3.24e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 2 KSRSQSLLMRRIALHAALAPLAVIWLFPLWMMFVFSTMPDNGIFSPDIVLWPSTNFIENFKNLQADTDFVGAMVISVGVA 81
Cdd:COG0395 4 TARRRRRRLGRILLYLLLILLALLFLFPLYWMVVTSFKPPAEIFSGPPSLLPSEFTLENYRAAFTDGPFGRYLLNSLIVA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 82 IIYTFLSVMLTSMAGWALARYRFVGRSIVIAIIIGTITLPFSVVVIPQFIMVaREFRLANTWVALIVPPLF--NSLGVLF 159
Cdd:COG0395 84 VVSTVLSLLLSSLAAYALARFRFRGRKLLFLLILATLMIPGQVLLIPLYLLF-RQLGLLNTYWGLILPYLAfgLPFGIFL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 160 MRQSFSMMPGELFDAARVEGVKEWQIFLRIALPLARPTMAALAIILFLASWNNYLWPLLINSKPGMMTAPVALGTLIGLT 239
Cdd:COG0395 163 LRQFFRSIPRELEEAARIDGASEFRIFWRIVLPLSKPALATVAIFTFIGAWNDFLWPLILLTSPDLRTLPVGLASFQGQY 242
|
250 260 270
....*....|....*....|....*....|....*....
gi 1037396469 240 KVSWGGIMAGAVLLTAPILVIFVALQRHFIAGIAAGAIK 278
Cdd:COG0395 243 GTDWGLLMAAAVIATLPVLILFLFLQRYFVRGLTAGAVK 281
|
|
| PRK10973 |
PRK10973 |
sn-glycerol-3-phosphate ABC transporter permease UgpE; |
27-272 |
2.53e-30 |
|
sn-glycerol-3-phosphate ABC transporter permease UgpE;
Pssm-ID: 182875 [Multi-domain] Cd Length: 281 Bit Score: 114.83 E-value: 2.53e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 27 LFPLWMMFVFSTMPDNGIFSPDIVLWPSTNFIENFKNL------QADTDFVGAMVISVGVAIIYTFLSVMLTSMAGWALA 100
Cdd:PRK10973 24 LFPLYVAFVAATLDKQAVFAVPMTLIPGTHLLENIANIwvngvgNNSAPFGRMLLNSFVMAFSITVGKITVSMLSAFAIV 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 101 RYRFVGRSIVIAIIIGTITLPFSVVVIPQFIMVAReFRLANTWVALIVPPLFNSLGVLFMRQSFSMMPGELFDAARVEGV 180
Cdd:PRK10973 104 WFRFPLRNLFFWMIFITLMLPVEVRIFPTVEVIAN-LKMLDSYAGLTLPLMASATATFLFRQFFMTLPDELVEAARIDGA 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 181 KEWQIFLRIALPLARPTMAALAIILFLASWNNYLWPLLINSKPGMMTAPVALGTLI--GLTKVSWGGIMAGAVLLTAPIL 258
Cdd:PRK10973 183 SPMRFFWDIVLPLSKTNLAALFVITFIYGWNQYLWPLLIITDVSLGTAVAGIKGMIatGEGTTEWNQVMAAMLLTLIPPV 262
|
250
....*....|....
gi 1037396469 259 VIFVALQRHFIAGI 272
Cdd:PRK10973 263 VIVLAMQRAFVRGL 276
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
74-258 |
1.78e-09 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 56.13 E-value: 1.78e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 74 MVISVGVAIIYTFLSVMLTSMAGWALARYRFVGRSIVIAIIIGTITLPFSVVVIPQFIMVAREFRLAN-----TWVALIV 148
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGIlpglgLPALILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 149 PPLFNSLGVLFMRQSFSMMPGELFDAARVEGVKEWQIFLRIALPLARPTMAALAIILFLASWNNYLWPLLINSKPGMMTA 228
Cdd:cd06261 81 LLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGPG 160
|
170 180 190
....*....|....*....|....*....|
gi 1037396469 229 PVALGTLIGLTKVSWGGIMAGAVLLTAPIL 258
Cdd:cd06261 161 TGLLLIFAILFPGDLGVAAAVALILLLLSL 190
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
101-272 |
1.04e-06 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 48.06 E-value: 1.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 101 RYRFVGRSIVIAIIIGTITLPFSVVVIP-QFIMVAREFRLANTWVALIVPPLFNSLGVLFMRQSFSMMPGELFDAARVEG 179
Cdd:pfam00528 11 RRGRRLDRLLRPLIDLLQALPSFVLAILlVVIAILSILGHGILPAIILALLGWAGYARLIRRAALRSLPSDLVEAARALG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 180 VKEWQIFLRIALPLARPTMAALAIILFLASWNNYLWPLLINSKPGMMTAPVALGTLIGLTkvSWGGIMAGAVLLTAPILV 259
Cdd:pfam00528 91 ASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGLGLLLIEAILGYDYP--EIQGPVLAAALILLLLNL 168
|
170
....*....|...
gi 1037396469 260 IFVALQRHFIAGI 272
Cdd:pfam00528 169 LVDILQRLLDPRV 181
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| UgpE |
COG0395 |
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ... |
2-278 |
3.24e-76 |
|
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440164 [Multi-domain] Cd Length: 282 Bit Score: 233.45 E-value: 3.24e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 2 KSRSQSLLMRRIALHAALAPLAVIWLFPLWMMFVFSTMPDNGIFSPDIVLWPSTNFIENFKNLQADTDFVGAMVISVGVA 81
Cdd:COG0395 4 TARRRRRRLGRILLYLLLILLALLFLFPLYWMVVTSFKPPAEIFSGPPSLLPSEFTLENYRAAFTDGPFGRYLLNSLIVA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 82 IIYTFLSVMLTSMAGWALARYRFVGRSIVIAIIIGTITLPFSVVVIPQFIMVaREFRLANTWVALIVPPLF--NSLGVLF 159
Cdd:COG0395 84 VVSTVLSLLLSSLAAYALARFRFRGRKLLFLLILATLMIPGQVLLIPLYLLF-RQLGLLNTYWGLILPYLAfgLPFGIFL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 160 MRQSFSMMPGELFDAARVEGVKEWQIFLRIALPLARPTMAALAIILFLASWNNYLWPLLINSKPGMMTAPVALGTLIGLT 239
Cdd:COG0395 163 LRQFFRSIPRELEEAARIDGASEFRIFWRIVLPLSKPALATVAIFTFIGAWNDFLWPLILLTSPDLRTLPVGLASFQGQY 242
|
250 260 270
....*....|....*....|....*....|....*....
gi 1037396469 240 KVSWGGIMAGAVLLTAPILVIFVALQRHFIAGIAAGAIK 278
Cdd:COG0395 243 GTDWGLLMAAAVIATLPVLILFLFLQRYFVRGLTAGAVK 281
|
|
| MalG |
COG3833 |
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ... |
1-278 |
1.21e-38 |
|
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];
Pssm-ID: 443045 [Multi-domain] Cd Length: 282 Bit Score: 136.82 E-value: 1.21e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 1 MKSRSQSLLMRRIALHAALAPLAVIWLFPLWMMFVFSTMPDNGIFSPDivLWPSTNFIENFKNLQADTDFVGAMVISVGV 80
Cdd:COG3833 4 RKSRKRRRRLKLGLRHLVLIILAIIALFPILWVVSASFNPGGSLYSSS--LIPENFTLENYKKLFTETPFLRWFLNSLIV 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 81 AIIYTFLSVMLTSMAGWALARYRFVGRSIVIAIIIGTITLPFSVVVIPQFIMVAReFRLANTWVALIVPPLFNSLGVLF- 159
Cdd:COG3833 82 AVVTAIISVFLAALAAYAFSRFRFKGRKAGLLALLLLQMFPAFLALVALYLLLSA-LGLLNTLLGLILVYLGGAIPFNTw 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 160 -MRQSFSMMPGELFDAARVEGVKEWQIFLRIALPLARPTMAALAIILFLASWNNYLWPLLINSKPGMMTAPVALGTLI-G 237
Cdd:COG3833 161 lMKGYFDTIPKELDEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDFILASVLLRSPENYTLAVGLYSFVsD 240
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1037396469 238 LTKVSWGGIMAGAVLLTAPILVIFVALQRHFIAGIAAGAIK 278
Cdd:COG3833 241 QRNTNWGVFAAGAVLVAIPIVILFLFLQRYLVSGLTAGGVK 281
|
|
| PRK10973 |
PRK10973 |
sn-glycerol-3-phosphate ABC transporter permease UgpE; |
27-272 |
2.53e-30 |
|
sn-glycerol-3-phosphate ABC transporter permease UgpE;
Pssm-ID: 182875 [Multi-domain] Cd Length: 281 Bit Score: 114.83 E-value: 2.53e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 27 LFPLWMMFVFSTMPDNGIFSPDIVLWPSTNFIENFKNL------QADTDFVGAMVISVGVAIIYTFLSVMLTSMAGWALA 100
Cdd:PRK10973 24 LFPLYVAFVAATLDKQAVFAVPMTLIPGTHLLENIANIwvngvgNNSAPFGRMLLNSFVMAFSITVGKITVSMLSAFAIV 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 101 RYRFVGRSIVIAIIIGTITLPFSVVVIPQFIMVAReFRLANTWVALIVPPLFNSLGVLFMRQSFSMMPGELFDAARVEGV 180
Cdd:PRK10973 104 WFRFPLRNLFFWMIFITLMLPVEVRIFPTVEVIAN-LKMLDSYAGLTLPLMASATATFLFRQFFMTLPDELVEAARIDGA 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 181 KEWQIFLRIALPLARPTMAALAIILFLASWNNYLWPLLINSKPGMMTAPVALGTLI--GLTKVSWGGIMAGAVLLTAPIL 258
Cdd:PRK10973 183 SPMRFFWDIVLPLSKTNLAALFVITFIYGWNQYLWPLLIITDVSLGTAVAGIKGMIatGEGTTEWNQVMAAMLLTLIPPV 262
|
250
....*....|....
gi 1037396469 259 VIFVALQRHFIAGI 272
Cdd:PRK10973 263 VIVLAMQRAFVRGL 276
|
|
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
10-266 |
4.07e-13 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 67.44 E-value: 4.07e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 10 MRRIALHAALAPLAVIWLFPLWMMFVFStmpdngIFSPDIVLWPSTNF-IENFKNLQADTDFVGAMVISVGVAIIYTFLS 88
Cdd:COG1177 4 LGRLLLRLFLALVLLFLYLPILVLVLYS------FNDSWFLTFPPEGFtLRWYAELFSDPRLLDALLNSLLIALLSTLLA 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 89 VMLTSMAGWALARYRFVGRSIVIAIIIGTITLPFSVVVIPQFIMVAReFRLANTWVALIVPPLFNSL--GVLFMRQSFSM 166
Cdd:COG1177 78 TVLGTPAALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSA-LGLSGGLWGLILAHVVFTLpfVVLVVLARLQG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 167 MPGELFDAARVEGVKEWQIFLRIALPLARPTMAALAIILFLASWNNYLWPLLINSkPGMMTAPVALGTLI--GLTKVswg 244
Cdd:COG1177 157 FDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAG-PGVTTLPVYIYSMIrrGISPE--- 232
|
250 260
....*....|....*....|..
gi 1037396469 245 gIMAGAVLLTAPILVIFVALQR 266
Cdd:COG1177 233 -INALSTLLILLSLLLLLLAER 253
|
|
| malG |
PRK10998 |
maltose ABC transporter permease MalG; |
27-278 |
3.36e-11 |
|
maltose ABC transporter permease MalG;
Pssm-ID: 182891 Cd Length: 296 Bit Score: 62.42 E-value: 3.36e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 27 LFPLWMMFVFSTMPDN---GIFSPDIVLWPSTNFIENFKNLQADTDFVGA-------MVISVGVAIIYTFLSVMLTSMAG 96
Cdd:PRK10998 28 MFPLLMVIAISLREGNfatGSLIPEQISWEHWKLALGFSVEHADGRVTPPpfpvllwLWNSVKVAGITAIGIVALSTTCA 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 97 WALARYRFVGRSIVIAIIIGTITLPFSVVVIPQFIMVAR-----EFRLANTWVALIVPPLFN-SLGVLFMRQSFSMMPGE 170
Cdd:PRK10998 108 YAFARMRFKGKATLLKGMLIFQMFPAVLSLVALYALFDRlgqyiPFIGLNTHGGVIFAYLGGiALHVWTIKGYFETIDSS 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 171 LFDAARVEGVKEWQIFLRIALPLARPTMAALAIILFLASWNNYLWPLLINSKPGMMTAPVALGTLIGLTKVSWGGIMAGA 250
Cdd:PRK10998 188 LEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLNPQNYLWGDFAAAA 267
|
250 260
....*....|....*....|....*...
gi 1037396469 251 VLLTAPILVIFVALQRHFIAGIAAGAIK 278
Cdd:PRK10998 268 VLSAIPITVVFLLAQRWLVGGLTAGGVK 295
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
74-258 |
1.78e-09 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 56.13 E-value: 1.78e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 74 MVISVGVAIIYTFLSVMLTSMAGWALARYRFVGRSIVIAIIIGTITLPFSVVVIPQFIMVAREFRLAN-----TWVALIV 148
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGIlpglgLPALILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 149 PPLFNSLGVLFMRQSFSMMPGELFDAARVEGVKEWQIFLRIALPLARPTMAALAIILFLASWNNYLWPLLINSKPGMMTA 228
Cdd:cd06261 81 LLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGPG 160
|
170 180 190
....*....|....*....|....*....|
gi 1037396469 229 PVALGTLIGLTKVSWGGIMAGAVLLTAPIL 258
Cdd:cd06261 161 TGLLLIFAILFPGDLGVAAAVALILLLLSL 190
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
24-213 |
3.24e-08 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 54.01 E-value: 3.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 24 VIWLFPLWMMFVFSTMPdngIFSpdiVLWPS-TNFIENFKNLQADTDFVGAMVISVGVAIIYTFLSVMLTSMAGWALARY 102
Cdd:COG1178 11 LLLLLLALLLALLVLLP---LLA---LLLRAfTDGLANFWALLSDPYLWRALGNTLLLALLVTLLSLLLGVPLAWLLART 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 103 RFVGRSIVIAIIigtiTLPFsvvVIPQFIMV----------------------AREFRLANTWVALIVPPLFN-SLGVLF 159
Cdd:COG1178 85 DFPGRRLLRWLL----LLPL---ALPPYVVAlawialfgpngllntllralfgLEPPDIYGLGGIILVLVLFNyPYVYLL 157
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1037396469 160 MRQSFSMMPGELFDAARVEGVKEWQIFLRIALPLARPTMAALAIILFLASWNNY 213
Cdd:COG1178 158 LRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADF 211
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
59-266 |
7.34e-08 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 52.86 E-value: 7.34e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 59 ENFKNLQADTDFVGAMVISVGVAIIYTFLSVMLTSMAGWALARYRFVGRSIVIAIIIGTITLPFSVVVIPQFIMVAR--E 136
Cdd:COG1178 325 DNYRFVLLDPSLLRALLNSLLLALLAALLAVLLALLLAYLVRRRRGRLARLLDRLAMLPYAVPGIVLGLGLLLLFNRplP 404
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 137 FRLANTWVALIVpplfnSLGVLFM-------RQSFSMMPGELFDAARVEGVKEWQIFLRIALPLARPTMAALAIILFLAS 209
Cdd:COG1178 405 LLLYGTLAILVL-----AYVVRFLpfalrslEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTS 479
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1037396469 210 WNNY-----LWPllinskPGMMTAPVALGTLIGltKVSWGGIMAGAVLLTAPILVIFVALQR 266
Cdd:COG1178 480 MKELsatllLRP------PGFETLAVLIYQLAS--SGRYGEAAALALLLVLVSLLPVLLLER 533
|
|
| CysU |
COG0555 |
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ... |
66-206 |
1.39e-07 |
|
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440321 [Multi-domain] Cd Length: 268 Bit Score: 51.29 E-value: 1.39e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 66 ADTDFVGAMVISVGVAIIYTFLSVMLTSMAGWALARYRFVGRSIVIAIIIGTITLPFSVV------------VIPQFIMV 133
Cdd:COG0555 48 TSPRVLAALKLSLGTALIAALINLVFGLPLAWVLVRYRFPGKRLVDALVDLPFALPTAVAgiallllfgpngWLGQLLAP 127
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1037396469 134 ArEFRLANTWVALIVPPLFNSLG--VLFMRQSFSMMPGELFDAARVEGVKEWQIFLRIALPLARPTMAALAIILF 206
Cdd:COG0555 128 L-GIKVAFTPLGIVLAQTFVSLPfvVRTVQPVLEELDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAF 201
|
|
| PotB |
COG1176 |
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ... |
1-268 |
4.48e-07 |
|
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];
Pssm-ID: 440789 [Multi-domain] Cd Length: 287 Bit Score: 50.15 E-value: 4.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 1 MKSRSQSLLMRRIALHAALAPLAVIWLFPLWMMFVFSTMPDNGIFSPDIVLWpstnfIENFKNLQADTDFVGAMVISVGV 80
Cdd:COG1176 1 MSAALRRRLRPLLLLLPALLWLLLFFVLPLLLLLVYSFTTRDPYGGVVPGFT-----LENYARLFTDPLYLKVLLRTLWI 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 81 AIIYTFLSVMLTSMAGWALARYRFVGRSIVIAIIigtiTLPF--SVVV--------------IPQFIM----VAREFRLA 140
Cdd:COG1176 76 ALLTTLICLLLGYPIAYFLARAPPRWRNLLLLLV----ILPFwtSFLVrtyawivllgrnglLNSLLLalglIDEPLRLL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 141 NTWVALIVPPLFNSL--GVLFMRQSFSMMPGELFDAARVEGVKEWQIFLRIALPLARPTMAALAIILFLASWNNYLWPLL 218
Cdd:COG1176 152 YTEFAVVIGLVYVYLpfMVLPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAFVTPAL 231
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1037396469 219 INSKPGMMtapvaLGTLI---GLTKVSWGGIMAGAVLLTAPILVIFVALQRHF 268
Cdd:COG1176 232 LGGGKVLM-----IGNLIyqqFLSALNWPLAAALAVVLLLIVLLVLLLYLRLL 279
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|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
101-272 |
1.04e-06 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 48.06 E-value: 1.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 101 RYRFVGRSIVIAIIIGTITLPFSVVVIP-QFIMVAREFRLANTWVALIVPPLFNSLGVLFMRQSFSMMPGELFDAARVEG 179
Cdd:pfam00528 11 RRGRRLDRLLRPLIDLLQALPSFVLAILlVVIAILSILGHGILPAIILALLGWAGYARLIRRAALRSLPSDLVEAARALG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 180 VKEWQIFLRIALPLARPTMAALAIILFLASWNNYLWPLLINSKPGMMTAPVALGTLIGLTkvSWGGIMAGAVLLTAPILV 259
Cdd:pfam00528 91 ASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGLGLLLIEAILGYDYP--EIQGPVLAAALILLLLNL 168
|
170
....*....|...
gi 1037396469 260 IFVALQRHFIAGI 272
Cdd:pfam00528 169 LVDILQRLLDPRV 181
|
|
| UgpA |
COG1175 |
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; |
24-213 |
2.72e-04 |
|
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440788 [Multi-domain] Cd Length: 298 Bit Score: 41.66 E-value: 2.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 24 VIWLFPLWMMFVFSTMPDNGIFspdivlwPSTNFI--ENFKNLQADTDFVGAMVISVGVAIIYTFLSVMLTSMAGWALAR 101
Cdd:COG1175 33 VFVLYPLLYTLYLSFTDWNLLG-------PPPEFVglDNYARLFTDPRFWNALGNTLLFTVVSVPLQLVLGLLLALLLNR 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 102 yRFVGRSIVIAIIIGTITLPFSVVVIPQFIMVAREFRLANTWVALI----VPPLFNSLGVLFM-------RQS-FSMM-- 167
Cdd:COG1175 106 -KLRGRGFFRTLFFLPWVISPVVVALIWKWLFNPDYGLLNALLGALglepINWLGDPSLALPAviivtvwKGTgFNMLif 184
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1037396469 168 -------PGELFDAARVEGVKEWQIFLRIALPLARPTMAALAIILFLASWNNY 213
Cdd:COG1175 185 laglqsiPRELYEAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIGALQVF 237
|
|
| modB |
PRK09421 |
molybdate ABC transporter permease subunit; |
73-206 |
6.93e-03 |
|
molybdate ABC transporter permease subunit;
Pssm-ID: 181841 Cd Length: 229 Bit Score: 37.21 E-value: 6.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1037396469 73 AMVISVGVAIIYTFLSVMLTSMAGWALARYRFVGRSIVIAIIIGTITLPFSVV------------VIPQFIMVAREFRLA 140
Cdd:PRK09421 10 AVLLSLKVSSVAVLFSLPFGILVAWLLARCRFPGKSLLDSLLHLPLVLPPVVTgylllismgrrgFIGQWLYEWFGISFA 89
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1037396469 141 NTW--VALIVPPLFNSLGVLFMRQSFSMMPGELFDAARVEGVKEWQIFLRIALPLARPTMAALAIILF 206
Cdd:PRK09421 90 FSWrgAALAAAVMAFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAF 157
|
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