|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-369 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 654.27 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGI 80
Cdd:CHL00025 329 YMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGI 408
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 81 PPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLNTYFINYSGKKSRSFYSISLWGKEEDKKLN 160
Cdd:CHL00025 409 PPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWGKEESKKIN 488
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 161 RNFglvPLLTMNNTKRTSFFGNKTYKISNNVRNQTFITVENFGlNTRTFYYPHESDNTILFPMLVLLLFTLFIGAIGIPF 240
Cdd:CHL00025 489 KLL---LLLTMNNNERVSFFSKKTYKIDGNVRNMIRSFITIFG-NKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPF 564
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 241 NQEGIDFDILSKLLTPSINLLHTNSENF-DWYEFFQNASFSVSIALFGIFIAYCLYKPFYSSKLNLTLLNSFQKWSSKRI 319
Cdd:CHL00025 565 NQEGIDLDILSKWLTPSINLLHQNSNNSvDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINSFVKGGPKRI 644
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1009024813 320 RWEKPINFVYNWSYNRGYIDTFLKKYLTESIRKLAKQTNFFDKRIIDGIT 369
Cdd:CHL00025 645 FLDKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGIT 694
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
120-361 |
9.06e-132 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 376.57 E-value: 9.06e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 120 RIYLLTFEGHLNTYFINYSGKKSRSFYSISLWGKEEDKKLNRNFGLVPLLTMNNTKRTSFFGNKTYKISNNVRN--QTFI 197
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTLLLLTMNNNEKVSFFSKKTYRIDGNVRNmtRPFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 198 TVENFGlNTRTFYYPHESDNTILFPMLVLLLFTLFIGAIGIPFNQEGIDFDILSKLLTPSINLLHTNSENF-DWYEFFQN 276
Cdd:pfam01010 81 TITHFD-NKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNSNNSvDWYEFVTN 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 277 ASFSVSIALFGIFIAYCLYKPFYSSKLNLTLLNSFQKWSSKRIRWEKPINFVYNWSYNRGYIDTFLKKYLTESIRKLAKQ 356
Cdd:pfam01010 160 AIFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLAEL 239
|
....*
gi 1009024813 357 TNFFD 361
Cdd:pfam01010 240 THFFD 244
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-368 |
1.45e-73 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 241.08 E-value: 1.45e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGI 80
Cdd:PRK07376 329 YMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGI 408
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 81 PPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEGhlntyfiNYSGkksrsfysislwgkeEDKKLN 160
Cdd:PRK07376 409 PPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEG-------EFRG---------------NDKELQ 466
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 161 RNfglvplLTMNNTKRTSFFGNKTYKISNNVRNQTfitvenfglntrtfyyPHESDNTILFPMLVLLLFTLFIGAIGIPF 240
Cdd:PRK07376 467 KE------LLAAADAPGHHEGHHEEHGEHHHHSGS----------------PHESPWTMTLPLVVLAVPSVLIGLLGTPW 524
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 241 NQEGIDFdilskLLTPSINLLHtnSENFDWYEFFQNASFSVSIALFGIFIAYCLYkpfYSSKLNL-TLLNSFQKwsskri 319
Cdd:PRK07376 525 NNRFEAF-----LHAPGEALEA--AAHFEWGEFLILAGASVGIALIGITLASLMY---LLKKIDPaAIAERFPP------ 588
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1009024813 320 rwekpinfVYNWSYNRGYIDTFLKKYLTESIRKLAKQTNFFDKRIIDGI 368
Cdd:PRK07376 589 --------LYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGV 629
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-368 |
1.47e-50 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 178.42 E-value: 1.47e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdkSQNMILMGGLTKHVPITKTAFLVGTLSLCGI 80
Cdd:COG1009 313 YMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGALSLAGI 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 81 PPLACFWSKDEILN---DSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFeghlntyfinysgkksrsfysislWGKEEDK 157
Cdd:COG1009 384 PPFAGFFSKEAILEaalEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVF------------------------FGKPRPK 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 158 KLNRnfglvplltmnntkrtsffgnktykisnnvrnqtfitvenfglntrtfyyPHESDNTILFPMLVLLLFTLFIGAIG 237
Cdd:COG1009 440 TPKH--------------------------------------------------PHESPWLMTLPLVVLAVLSLVLGLLL 469
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 238 IPFNQEGIDfdiLSKLLTPSINLLHTnsenfdwyEFFQNASFSVSIAlfGIFIAYCLYkpfyssklnltllnsfqkWSSK 317
Cdd:COG1009 470 PGLLEGLLA---PAAVLGGELHLAHG--------LLLNALPLLLSLL--GIALGYLLY------------------LKRP 518
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1009024813 318 RIRWEKPINFVYNWSYNRGYIDTFLKKYLTESIRKLAKqTNFFDKRIIDGI 368
Cdd:COG1009 519 LPALAERLKPLYRLLANKWYFDELYDALFVKPVRALAR-FLWFDRYVIDGI 568
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-368 |
6.26e-49 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 174.19 E-value: 6.26e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGI 80
Cdd:PRK06590 319 YMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRKMGGLRKKMPVTYATFLIGTLALIGI 390
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 81 PPLACFWSKDEILNDSLLFSPIFA-IIACSTAGLTAFYMFRIYLLTFeghlntyfinysgkksrsfysislwgkeedkkl 159
Cdd:PRK06590 391 PPFAGFFSKDEILEAAFANGHINLfVAGLVGAFLTAFYSFRLIFLVF--------------------------------- 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 160 nrnfglvplltmnntkrtsffgnktykisnnvrnqtfitvenFGLNTRTFYYPHESDNTILFPMLVLLLFTLFIGAIGIP 239
Cdd:PRK06590 438 ------------------------------------------HGKEKEKIHHPHESPAVMTLPLIVLAVLSVFAGALIVP 475
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 240 FnqegidfdiLSKLLTPSINLLHTNSEnfdWYEFFQNASFSVSIALFGIFIAYCLYKpfyssklnltllnsFQKWSSKri 319
Cdd:PRK06590 476 P---------FLGVLPLTTELAHGEAE---HHLPVWVALLPLVVALAGIALAWLLYL--------------KKPTLPT-- 527
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1009024813 320 RWEKPINFVYNWSYNRGYIDTFLKKYLTESIRKLAKqtnFFDKRIIDGI 368
Cdd:PRK06590 528 SIAAPGRFLYTLLRNKYYFDELYEKVFVKPGLALAR---LLWKDGDDGI 573
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
1-368 |
1.26e-37 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 142.81 E-value: 1.26e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGI 80
Cdd:TIGR01974 315 YMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLALIGF 386
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 81 PPLACFWSKDEIL-------NDSLLFspIFAIIAcstAGLTAFYMFRIYLLTFEGhlntyfinysgkKSRsfysislwgk 153
Cdd:TIGR01974 387 PGFAGFFSKDLILeaafasgTHSFLF--VAGLIG---AFLTAFYSFRLIFMVFHG------------KER---------- 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 154 eedkklnrnfglvplltmnntkrtsffgnktykisnnvrnqtfitvenfglnTRTFYYPHESDNTILFPMLVLLLFTLFI 233
Cdd:TIGR01974 440 ----------------------------------------------------HEADAHPHESPLVMLLPLIVLAVGSVFA 467
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 234 GAIGIPFnqegidFDILSklltPSINLLHTNSENFDWYEFFQNASfSVSIALFGIFIAYCLYkpfyssKLNLTLLNSFqk 313
Cdd:TIGR01974 468 GFFIVPL------FEFLK----GVLPTSAEPALEHHHVPALEIWS-PTAVAILGILLAYLLY------LGNPTLPAKI-- 528
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1009024813 314 wsskrirwEKPINFVYNWSYNRGYIDTFLKKYLTESIRKLAKQTNFF-DKRIIDGI 368
Cdd:TIGR01974 529 --------AQRHSGLYRLLLNKWYFDELYDKVFVKPYLFLGKLLWKDpDDKIIDGF 576
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
2-146 |
2.12e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 104.54 E-value: 2.12e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 2 MMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIP 81
Cdd:MTH00151 279 MMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSS--------SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAP 350
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1009024813 82 PLACFWSKDEILnDSLLFSPI----FAIIACSTaGLTAFYMFRIYLLTFEGHLNTYFinYSGKKSRSFY 146
Cdd:MTH00151 351 FLSGFYSKDLIL-ESSLMSPTsllmVLLMFVGV-GLTALYSARLSFCLVWGSMKSSS--LSSKSDEDFY 415
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
1-112 |
4.30e-24 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 100.47 E-value: 4.30e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSL 77
Cdd:pfam00361 185 YMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV--------HTRNIRDYGGLAKTMPILALVFLVAMLSL 256
|
90 100 110
....*....|....*....|....*....|....*
gi 1009024813 78 CGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAG 112
Cdd:pfam00361 257 AGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
1-126 |
6.94e-23 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 100.15 E-value: 6.94e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGI 80
Cdd:MTH00020 312 YMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHAL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGF 383
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1009024813 81 PPLACFWSKDEILNDSLL-FSPIFAI-IACSTAGLTAFYMFRIYLLTF 126
Cdd:MTH00020 384 PYLTGFYSKDLILELAFGqYYLIFAYwLGCFSALLTAFYSIRLIYLTF 431
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
2-123 |
1.88e-22 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 98.68 E-value: 1.88e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 2 MMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIP 81
Cdd:MTH00207 282 MMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSP 353
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1009024813 82 PLACFWSKDEILNDSLLF---SPIFAIIACSTaGLTAFYMFRIYL 123
Cdd:MTH00207 354 FLSGFYSKDLILESSLFYphnSLMILMIFLAT-ALTAAYSTRFTL 397
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
1-132 |
3.57e-22 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 97.77 E-value: 3.57e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGI 80
Cdd:MTH00210 313 YMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV--------SDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGF 384
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1009024813 81 PPLACFWSKDEILndSLLFSPIFAIIA----CSTAGLTAFYMFRIYLLTFEGHLNT 132
Cdd:MTH00210 385 PYLTGFYSKDLIL--ELTYDKYYIAFAywlgSFSALLTAFYSIRLIYLTFITNTNS 438
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
2-142 |
1.28e-21 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 95.98 E-value: 1.28e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 2 MMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIP 81
Cdd:MTH00165 282 MMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNM--------SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFP 353
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1009024813 82 PLACFWSKDEIL-----NDSLLFSPIFAIIACstaGLTAFYMFRIYLLTFEGHLNTYFINYSGKKS 142
Cdd:MTH00165 354 FLSGFYSKDLILemvsmSNLNFFIFFLFFFST---GLTVSYSFRLIYYSMSGDFNLKSLNNLSDES 416
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-122 |
2.38e-21 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 94.44 E-value: 2.38e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSL 77
Cdd:COG0651 310 YILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIGALAL 380
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1009024813 78 CGIPPLACFWSKDEILnDSLLFS--PIFAIIACSTAGLTAFYMFRIY 122
Cdd:COG0651 381 AGLPPLSGFVSKWLLL-QAALEAgaWLLAAVLLLSSLLTLAYFVRIF 426
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-128 |
1.59e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 92.73 E-value: 1.59e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSL 77
Cdd:PRK12667 333 YIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAGLGRKMPIASFAFLIGALSL 403
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1009024813 78 CGIPPLACFWSKdEILNDSLLFS--PIFAIIACSTAGLTAFYMFRIYLLTFEG 128
Cdd:PRK12667 404 VGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
2-126 |
2.10e-20 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 92.73 E-value: 2.10e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 2 MMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIP 81
Cdd:MTH00208 339 MVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTP 410
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1009024813 82 PLACFWSKDEIL-----NDSLLFSPIFAIIACStagLTAFYMFRIYLLTF 126
Cdd:MTH00208 411 FLAGFYSKDLILeaglaSISNLLSIILALIATL---LTAVYSFRIIFFCF 457
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
2-129 |
3.92e-20 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 91.94 E-value: 3.92e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 2 MMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIP 81
Cdd:MTH00211 307 MMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGL--------NNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFP 378
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1009024813 82 PLACFWSKDEIL---NDSLL--FSPIFAIIAcstAGLTAFYMFRIYLLTFEGH 129
Cdd:MTH00211 379 FLSGFFSKDLILesmNGSYLnaWALLLTLLA---TSLTAAYSFRLIFLSLGGY 428
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
1-128 |
4.87e-20 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 91.51 E-value: 4.87e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMML---ALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSmeaivgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSL 77
Cdd:PRK07390 319 YLGLvfiAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT---------TITQDLTELGGLWSRMPATTLAFLVGSAGL 389
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1009024813 78 CGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEG 128
Cdd:PRK07390 390 VALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVFLG 440
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
2-129 |
6.55e-20 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 90.99 E-value: 6.55e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 2 MMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIP 81
Cdd:MTH00004 312 MMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTP 383
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1009024813 82 PLACFWSKD---EILNDSLLFSPIFAIIACSTAgLTAFYMFRIYLLTFEGH 129
Cdd:MTH00004 384 FLSGFYSKDtiiETLNTSYLNAWALLLTLLATS-FTAAYSLRMILLVQTGF 433
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
2-136 |
1.96e-18 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 86.50 E-value: 1.96e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 2 MMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIP 81
Cdd:MTH00066 310 MMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQKALPITTSCLTIGSLALTGTP 381
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1009024813 82 PLACFWSKDEI---LNDSLL--FSPIFAIIACStagLTAFYMFRIY---LLTFEGHLNTYFIN 136
Cdd:MTH00066 382 FLAGFFSKDAIieaMNTSNLnsWALILTLIATS---FTAVYSFRIIyfsSMKFPRSLPLSPIN 441
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
2-143 |
1.96e-18 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 86.62 E-value: 1.96e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 2 MMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIP 81
Cdd:MTH00209 278 MMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHG--------HSQDIRMVGNLWYQMPITSICLNIANLSLCGIP 349
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1009024813 82 PLACFWSKDEILNDSLL--FSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLNTYFINYSGKKSR 143
Cdd:MTH00209 350 FLAGFYSKDLILESMLEsnMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNK 413
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
1-128 |
2.83e-17 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 83.40 E-value: 2.83e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdkSQNMILMGGLTKHVPITKTAFLVGTLSLCGI 80
Cdd:PRK06521 328 YGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATG---------TRDMEKLGGLIRRMPWTAWAFLIGCLAISAL 398
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 81 PPLACFWSKDEILNdSLLFS------------PIFAIIACSTAGLTAFYMFRIYLLTFEG 128
Cdd:PRK06521 399 PPLNGFVSEWLLLQ-SLLSSpglpqwglklavPIAAAMLALTAALAAMCFVKFYGITFLG 457
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
2-121 |
1.90e-16 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 80.65 E-value: 1.90e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 2 MMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIP 81
Cdd:MTH00137 318 MMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTP 389
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1009024813 82 PLACFWSKDEI---LNDSLL--FSPIFAIIACStagLTAFYMFRI 121
Cdd:MTH00137 390 FLAGFFSKDAIieaLNTSHLnaWALTLTLIATS---FTAVYSLRV 431
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
2-129 |
2.01e-16 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 80.67 E-value: 2.01e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 2 MMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIP 81
Cdd:MTH00108 313 MMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNL--------NDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMP 384
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1009024813 82 PLACFWSKD---EILNDS------LLFSpifaIIACStagLTAFYMFRIYLLTFEGH 129
Cdd:MTH00108 385 FLTGFYSKDliiEAANTSytnawaLLIT----LIATS---LTAAYSTRIIFFALLGQ 434
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
1-93 |
4.40e-16 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 79.62 E-value: 4.40e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGM-GSYRSALFHLITHAYSKALLFLGSGSIIHSMEAivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLCG 79
Cdd:MTH00032 327 YMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV-------DEQDMRKMGGLIHSIPFTYTMMLIGSFSIMG 399
|
90
....*....|....
gi 1009024813 80 IPPLACFWSKDEIL 93
Cdd:MTH00032 400 LPYLTGFYSKDLIL 413
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-128 |
8.26e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 78.60 E-value: 8.26e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMG--SYRS-------------ALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPI 65
Cdd:PRK08376 325 YMLLGLGVGlaALGDpamasygeialagGIYHIVNHALYKALLFLTAGAVIYET---------GTRNLNELGGLARTMPK 395
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1009024813 66 TKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEG 128
Cdd:PRK08376 396 TTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-121 |
1.68e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 71.45 E-value: 1.68e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNMILMGGLTKHVPITKTAFLVGTLSL 77
Cdd:PRK08375 309 YILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAI----EVTYG-----TRRLSELSGLGRRMPLTAAAFAVASLSL 379
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1009024813 78 CGIPPLACFWSKDEIL---NDSLLFSPIFAIIACSTagLTAFYMFRI 121
Cdd:PRK08375 380 IGVPPTSGFVSKWYLVvgaVEAGQWLVLAVLLASSL--LALLYFLRI 424
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
1-89 |
8.36e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 63.48 E-value: 8.36e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSL 77
Cdd:PRK08668 310 YILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFAAVIYRT---------GTTKISEMGGLIEKMPFTFAMYLVAIISL 380
|
90
....*....|..
gi 1009024813 78 CGIPPLACFWSK 89
Cdd:PRK08668 381 AGIPPMSGFASK 392
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
1-106 |
1.37e-09 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 59.22 E-value: 1.37e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMGSYRS------ALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAFLVGT 74
Cdd:PRK06525 310 YMFFGLSLAILGSrlalegSIAYIFNHAFAKSLFFLVAGALSYSC---------GTRLLPRLRGVLKKLPLVGVGFCVAA 380
|
90 100 110
....*....|....*....|....*....|..
gi 1009024813 75 LSLCGIPPLACFWSKDEILNDSLLFSPIFAII 106
Cdd:PRK06525 381 LAITGVPPFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
4-128 |
2.13e-09 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 58.62 E-value: 2.13e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 4 LALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGI 80
Cdd:PRK08377 314 LALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALALTIGALSTVGI 384
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1009024813 81 PPLACFWSKDEILNDSL---LFSPIFAIIACSTagLTAFYMFR-IYLLTFEG 128
Cdd:PRK08377 385 PLFNVFWSKFRIILAGLsagYTWPVALVLGASV--VEAVYYFRlIHTMWFKG 434
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
3-89 |
5.95e-09 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 57.43 E-value: 5.95e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 3 MLALGmgsyrSALFHLITHAYSKALLFLGSGSIIHSmeaiVGyspdkSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPP 82
Cdd:PRK08667 329 LLALG-----GALFHSLNHALFKSLLFLTAGSVVHA----TG-----TRNIEKMGGLVKLMPYTSALFLVGAVSIAALPP 394
|
....*..
gi 1009024813 83 LACFWSK 89
Cdd:PRK08667 395 FNGFASE 401
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-121 |
2.40e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 55.59 E-value: 2.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 10 SYRSALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSK 89
Cdd:PRK06589 330 ALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISK 400
|
90 100 110
....*....|....*....|....*....|....*..
gi 1009024813 90 DEIL-----NDSLLFSPIFAIIACSTAGLTAFYMFRI 121
Cdd:PRK06589 401 FLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKI 437
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
3-128 |
2.75e-08 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 55.60 E-value: 2.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 3 MLALGMgsyRSALFHLITHAYSKALLFLGSGSIIHSmeaiVGYspdksQNMILMGGLTKHVPITKTAFLVGTLSLCGIPP 82
Cdd:PRK08042 302 LIALGL---VGGLYHLLNHSLFKSVLFLGAGSVWFR----TGH-----RDIEKLGGIGKKMPVISIAMLVGLMAMAALPP 369
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1009024813 83 LACFWSKDEI------LNDSLLF-----SPIFAIIACSTAGLTAFYMFRIYLLTFEG 128
Cdd:PRK08042 370 LNGFAGEWVIyqsffkLSNSGAFvarllGPLLAVGLAITGALAVMCMAKVYGVTFLG 426
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
13-132 |
7.72e-08 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 54.38 E-value: 7.72e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 13 SALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKD-- 90
Cdd:PRK12646 341 AALFHLMNHAIFKCALFMGVGIIDHEA---------GTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEmf 411
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1009024813 91 --------EILNDSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLNT 132
Cdd:PRK12646 412 ldaltqtgQLSQFSLISMIIIVFIGVIASIFTFTYALYMVKEVFWGKYDS 461
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
2-124 |
1.25e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 53.38 E-value: 1.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 2 MMLaLGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmeaiVGySPDKSQnmilMGGLTKHVPITKTAFLVGTLSLC 78
Cdd:PRK12647 299 VML-LGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE----TG-TRDITK----LGGLRRAMPITAAAALLAALSMA 368
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1009024813 79 GIPPLACFWSKDEILnDSLLFSPIFAIIACSTAGLTAFYMFRIYLL 124
Cdd:PRK12647 369 GLPPLFGFLAKELIY-EALLEAPLWSLILTVAAVLGNALMVAVAFL 413
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-128 |
3.64e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 51.87 E-value: 3.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMG---SYRSALFHLITHAYSKALLFLgsgsIIHSMEAIVGYSPDKSqnmilMGGLTKHVPITKTAFLVGTLSL 77
Cdd:PRK07691 313 VILVGVAMMtesGMIGAIYYLIHDMIVKAALFL----LIGIMIKITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSL 383
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1009024813 78 CGIPPLACFWSKDEILNDSLLF-SPIFAIIACSTAGLTAFYMFRIYLLTFEG 128
Cdd:PRK07691 384 AGIPPLSGFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWG 435
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
1-131 |
4.21e-07 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 51.74 E-value: 4.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSL 77
Cdd:PRK05846 315 FVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVLYDRL---------HTRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1009024813 78 CGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLN 131
Cdd:PRK05846 386 LGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVK 439
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
2-88 |
8.55e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 50.70 E-value: 8.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 2 MMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLC 78
Cdd:PRK06458 320 IAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKY---------GTRDINVIRGLLKVSPLTGWGLMLGALAIA 390
|
90
....*....|
gi 1009024813 79 GIPPLACFWS 88
Cdd:PRK06458 391 GMPPFGVFIS 400
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
1-126 |
1.04e-06 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 50.33 E-value: 1.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMGSY---RSALFHLITHAYSKALLFLGSGSIIhsmeAIVGYSPDKSqnmilMGGLTKHVPITKTAFLVGTLSL 77
Cdd:PRK12663 310 FILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLV----RLTGYRSLQY-----LGGLYRKEPLFGALFLILIFAI 380
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1009024813 78 CGIPPLACFWSKDEILNDSL-LFSPIFAIIACSTAGLTAFYMFRIYLLTF 126
Cdd:PRK12663 381 GGLPPFSGFWGKVLLVQGALdNGAYILLALMLITSLITMYSLFRIFFLAY 430
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-124 |
1.19e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 50.60 E-value: 1.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMGSYR-------SALFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNMILMGGLTKHVPITKTAFLVG 73
Cdd:PRK12649 316 YLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAH--EA-------ATRDIRKLGGLRKEMPITFIVASIA 386
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1009024813 74 TLSLCGIPPLACFWSKDEILNDSL----LFSPIFAII--ACSTAGLTAFYMFRIYLL 124
Cdd:PRK12649 387 ALAMAGIPPLNGFLSKEMFYETSVemgaLIGGPFTIIipAVAVLGGVFTFAYSIKLI 443
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
14-119 |
1.40e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 50.43 E-value: 1.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 14 ALFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEIL 93
Cdd:PRK12650 326 AVVHTLAHALFKSSLFMLIGVVDH--QA-------GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGML 396
|
90 100
....*....|....*....|....*....
gi 1009024813 94 nDSLLFSPIFA---IIACSTAGLTAFYMF 119
Cdd:PRK12650 397 -TAFLEAPGGNagvVLLLVGAALGAVFTF 424
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
4-107 |
2.66e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 49.42 E-value: 2.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 4 LALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGI 80
Cdd:PRK12648 312 LLLGLGSPLAavaAIFHIINHATFKASLFMAAGIIDH--ET-------GTRDMRRLSGLRRLMPITATLAMVAAAAMAGV 382
|
90 100 110
....*....|....*....|....*....|....*.
gi 1009024813 81 PPLACFWSK----DEILNDSLLFS-----PIFAIIA 107
Cdd:PRK12648 383 PLLNGFLSKemffAETLDTHLLGSldwllPVAATLA 418
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
14-129 |
5.44e-06 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 48.38 E-value: 5.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 14 ALFHLITHAYSKALLFLGSGSIIHSmeaiVGyspdkSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEIL 93
Cdd:PRK12645 341 AIFHLINHATFKGSLFMIVGIVDHE----TG-----TRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFF 411
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1009024813 94 NDSL------LFS--------PIFAIIAcstAGLTAFYMFRIYLLTFEGH 129
Cdd:PRK12645 412 ESMLnateanLFSldtwgvlfPVIAWVA---SVFTFVYSIIFIFKTFFGK 458
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
1-89 |
2.77e-05 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 46.04 E-value: 2.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmeaiVGYSpdksqNMILMGGLTKHVPITKTAFLVGTLSL 77
Cdd:PRK12668 278 YMVAGIGIGTalaINGAVAHAFNHILYKGLLFMSAGAVLYR----TGTE-----KLTELGGLYRSMPLTALFCLVGALSI 348
|
90
....*....|..
gi 1009024813 78 CGIPPLACFWSK 89
Cdd:PRK12668 349 SAFPLFSGFVSK 360
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
1-121 |
5.56e-05 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 44.72 E-value: 5.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMGS---YRSALFHLITHAYSKALLFLgsgsIIhsmeAIVGYSPDKSQNMILMGGLTKHVPITKTAFLVGTLSL 77
Cdd:COG1007 307 YLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VI----LLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSL 378
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1009024813 78 CGIPPLACFWSK----DEILNDSLLFspiFAIIACSTAGLTAFYMFRI 121
Cdd:COG1007 379 AGIPPTAGFFGKfyvfSAAVEAGLYW---LAVIAVLNSVISAYYYLRV 423
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-89 |
6.37e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 44.96 E-value: 6.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNMILMGGLTKHVPITKTAFLVGTLSL 77
Cdd:PRK12665 311 YMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVGLI----ERQAG-----SSSLRRLGGLAKASPLLAVLFFVPALNL 381
|
90
....*....|..
gi 1009024813 78 CGIPPLACFWSK 89
Cdd:PRK12665 382 GGIPPFSGFIGK 393
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
1-89 |
9.85e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 44.25 E-value: 9.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMILMGGLTKHVPITKTAFLVGTLSL 77
Cdd:PRK06277 304 YVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAI 374
|
90
....*....|..
gi 1009024813 78 CGIPPLACFWSK 89
Cdd:PRK06277 375 SGVPPFNGFQSK 386
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-121 |
4.72e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 42.12 E-value: 4.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMGS---YRSALFHLITHAYSKallfLGSGSIIHSMEaivgySPDKSQNMIL-MGGLTKHVPITKTAFLVGTLS 76
Cdd:PRK05777 308 YLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLR-----RKGGEAESISdFAGLSKRSPLLAAVMTIFMLS 378
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1009024813 77 LCGIPPLACFWSKdeilndSLLFSPIF-------AIIACSTAGLTAFYMFRI 121
Cdd:PRK05777 379 LAGIPPTAGFWGK------FYVFEAAVeaglwwlAVIGVLNSAIGAFYYLRV 424
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
1-59 |
2.37e-03 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 39.63 E-value: 2.37e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 1009024813 1 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMILMGGL 59
Cdd:PRK08601 304 FMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFNIVKQANEKKSYLWIVVGRV 362
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-121 |
3.45e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 39.33 E-value: 3.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1009024813 1 YMMLALGMGSYR---SALFHLITHAYSKALLFLGSGSIIHsmeaivGYSPDKSQNMIlmgGLTKHVPITKTAFLVGTLSL 77
Cdd:PRK12662 317 YIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISY------HFGTTKLEDCL---NLWKSMPKITLAFVLLSLSL 387
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1009024813 78 CGIPPLACFWSKDEILN---DSLLFSPIFAIIACStaGLTAFYMFRI 121
Cdd:PRK12662 388 IGMPPTSGFVAKWYILDafiKSNAWIGLVVLLVGS--GLSVIYVWKI 432
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
1-36 |
5.33e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 38.53 E-value: 5.33e-03
10 20 30
....*....|....*....|....*....|....*.
gi 1009024813 1 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSII 36
Cdd:PRK08168 301 FMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| |
