|
Name |
Accession |
Description |
Interval |
E-value |
| Gcd14 |
COG2519 |
tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]; tRNA A58 ... |
10-263 |
7.23e-137 |
|
tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]; tRNA A58 N-methylase Trm61 is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 442009 [Multi-domain] Cd Length: 249 Bit Score: 386.05 E-value: 7.23e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 10 GDRVQLTDSKNRHFTVILEEGGKFFTHRGEILHDDLIGAHEGTTVTSGQGTVYLAQRHLLVDYILSMPRGAAVIYPKDAA 89
Cdd:COG2519 2 GDRVLLTDPKGRKYLVRLEEGKKFHTHKGIIDHDDLIGKPEGSVVTTSKGKEFLVLRPTLYDYVLSMKRGTQIIYPKDAG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 90 QIIVEGDIFPGARVLEAGAGSGALSLNLLRAIGPDGKLISYEVREDHIEHAERNVIDFMgaKPDNWDLRLGDLNEATEEs 169
Cdd:COG2519 82 YIIARLDIFPGARVLEAGTGSGALTLALARAVGPEGKVYSYERREDFAEIARKNLERFG--LPDNVELKLGDIREGIDE- 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 170 lgGPVDRVILDMLAPWECLDTVSKVLQPGGVLMVYVATVPQLMKVMEGIREQKcYTEPRAWESLVRDWNVKDLSVRPAHR 249
Cdd:COG2519 159 --GDVDAVFLDMPDPWEALEAVAKALKPGGVLVAYVPTVNQVSKLVEALRESG-FTDIEAVETLLREWKVEGLAVRPEHR 235
|
250
....*....|....
gi 922845115 250 MQAHTAFLVWARRL 263
Cdd:COG2519 236 MVGHTGFLVFARKL 249
|
|
| GCD14_N |
pfam14801 |
tRNA methyltransferase complex GCD14 subunit N-term; This is the N-terminal domain of GCD14, ... |
4-54 |
6.54e-26 |
|
tRNA methyltransferase complex GCD14 subunit N-term; This is the N-terminal domain of GCD14, itself a subunit of the tRNA methyltransferase complex that is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA. The exact function of the N-terminus is not known but it is necessary for maintaining the overall folding and for full enzymatic activity.
Pssm-ID: 434222 Cd Length: 51 Bit Score: 96.41 E-value: 6.54e-26
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 922845115 4 SGPFQVGDRVQLTDSKNRHFTVILEEGGKFFTHRGEILHDDLIGAHEGTTV 54
Cdd:pfam14801 1 RGPFRAGDRVQLTDPKGRKHTITLEPGGEFHTHRGAIRHDDLIGRPEGSVV 51
|
|
| AdoMet_MTases |
cd02440 |
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ... |
102-203 |
4.88e-11 |
|
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).
Pssm-ID: 100107 [Multi-domain] Cd Length: 107 Bit Score: 58.60 E-value: 4.88e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 102 RVLEAGAGSGALSLNLlrAIGPDGKLISYEVREDHIEHAERNVIdfmGAKPDNWDLRLGDLNEATEESlGGPVDRVILDM 181
Cdd:cd02440 1 RVLDLGCGTGALALAL--ASGPGARVTGVDISPVALELARKAAA---ALLADNVEVLKGDAEELPPEA-DESFDVIISDP 74
|
90 100
....*....|....*....|....*...
gi 922845115 182 LAPWEC------LDTVSKVLQPGGVLMV 203
Cdd:cd02440 75 PLHHLVedlarfLEEARRLLKPGGVLVL 102
|
|
| PRK13942 |
PRK13942 |
protein-L-isoaspartate O-methyltransferase; Provisional |
96-223 |
1.93e-04 |
|
protein-L-isoaspartate O-methyltransferase; Provisional
Pssm-ID: 184409 Cd Length: 212 Bit Score: 41.54 E-value: 1.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 96 DIFPGARVLEAGAGSGALSLNLLRAIGPDGKLISYEVREDHIEHAERNVIDfMGAkpDNWDLRLGDLNEATEESlgGPVD 175
Cdd:PRK13942 73 DLKEGMKVLEIGTGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKK-LGY--DNVEVIVGDGTLGYEEN--APYD 147
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 922845115 176 RVILDMLAPwECLDTVSKVLQPGGVLMVYVATVPQ-LMKVME---GIREQKC 223
Cdd:PRK13942 148 RIYVTAAGP-DIPKPLIEQLKDGGIMVIPVGSYSQeLIRVEKdngKIIKKKL 198
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| Gcd14 |
COG2519 |
tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]; tRNA A58 ... |
10-263 |
7.23e-137 |
|
tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]; tRNA A58 N-methylase Trm61 is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 442009 [Multi-domain] Cd Length: 249 Bit Score: 386.05 E-value: 7.23e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 10 GDRVQLTDSKNRHFTVILEEGGKFFTHRGEILHDDLIGAHEGTTVTSGQGTVYLAQRHLLVDYILSMPRGAAVIYPKDAA 89
Cdd:COG2519 2 GDRVLLTDPKGRKYLVRLEEGKKFHTHKGIIDHDDLIGKPEGSVVTTSKGKEFLVLRPTLYDYVLSMKRGTQIIYPKDAG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 90 QIIVEGDIFPGARVLEAGAGSGALSLNLLRAIGPDGKLISYEVREDHIEHAERNVIDFMgaKPDNWDLRLGDLNEATEEs 169
Cdd:COG2519 82 YIIARLDIFPGARVLEAGTGSGALTLALARAVGPEGKVYSYERREDFAEIARKNLERFG--LPDNVELKLGDIREGIDE- 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 170 lgGPVDRVILDMLAPWECLDTVSKVLQPGGVLMVYVATVPQLMKVMEGIREQKcYTEPRAWESLVRDWNVKDLSVRPAHR 249
Cdd:COG2519 159 --GDVDAVFLDMPDPWEALEAVAKALKPGGVLVAYVPTVNQVSKLVEALRESG-FTDIEAVETLLREWKVEGLAVRPEHR 235
|
250
....*....|....
gi 922845115 250 MQAHTAFLVWARRL 263
Cdd:COG2519 236 MVGHTGFLVFARKL 249
|
|
| GCD14_N |
pfam14801 |
tRNA methyltransferase complex GCD14 subunit N-term; This is the N-terminal domain of GCD14, ... |
4-54 |
6.54e-26 |
|
tRNA methyltransferase complex GCD14 subunit N-term; This is the N-terminal domain of GCD14, itself a subunit of the tRNA methyltransferase complex that is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA. The exact function of the N-terminus is not known but it is necessary for maintaining the overall folding and for full enzymatic activity.
Pssm-ID: 434222 Cd Length: 51 Bit Score: 96.41 E-value: 6.54e-26
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 922845115 4 SGPFQVGDRVQLTDSKNRHFTVILEEGGKFFTHRGEILHDDLIGAHEGTTV 54
Cdd:pfam14801 1 RGPFRAGDRVQLTDPKGRKHTITLEPGGEFHTHRGAIRHDDLIGRPEGSVV 51
|
|
| GCD14 |
pfam08704 |
tRNA methyltransferase complex GCD14 subunit; GCD14 is a subunit of the tRNA methyltransferase ... |
74-240 |
3.33e-19 |
|
tRNA methyltransferase complex GCD14 subunit; GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA.
Pssm-ID: 312288 Cd Length: 242 Bit Score: 84.08 E-value: 3.33e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 74 LSMPRGAAVIYPKDAAQIIVEGDIFPGARVLEAGAGSGALSLNLLRAIGPDGKLISYEVredHIEHAERNVIDFMGAKPD 153
Cdd:pfam08704 15 LNLPHRTQILYTPDISLITMMLELRPGSVVCESGTGSGSLSHAIIRTVAPTGHLFTFEF---HEQRADKAREEFREHGID 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 154 NW-DLRLGDL-NEATEESLGGPVDRVILDMLAPWECLDTVSKVLQ-PGGVLMVYVATVPQLMKVMEGIREQKcYTEPRAW 230
Cdd:pfam08704 92 QLvTVTHRDVcKEGFLTEVSGKADAVFLDLPSPWEAVPHAWKALKvEGGRFCSFSPCIEQVQRTCQALAELG-FTEISTL 170
|
170
....*....|
gi 922845115 231 ESLVRDWNVK 240
Cdd:pfam08704 171 EVLLRVYDVR 180
|
|
| AdoMet_MTases |
cd02440 |
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ... |
102-203 |
4.88e-11 |
|
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).
Pssm-ID: 100107 [Multi-domain] Cd Length: 107 Bit Score: 58.60 E-value: 4.88e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 102 RVLEAGAGSGALSLNLlrAIGPDGKLISYEVREDHIEHAERNVIdfmGAKPDNWDLRLGDLNEATEESlGGPVDRVILDM 181
Cdd:cd02440 1 RVLDLGCGTGALALAL--ASGPGARVTGVDISPVALELARKAAA---ALLADNVEVLKGDAEELPPEA-DESFDVIISDP 74
|
90 100
....*....|....*....|....*...
gi 922845115 182 LAPWEC------LDTVSKVLQPGGVLMV 203
Cdd:cd02440 75 PLHHLVedlarfLEEARRLLKPGGVLVL 102
|
|
| TrmR |
COG4122 |
tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; ... |
102-220 |
9.91e-10 |
|
tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; tRNA 5-hydroxyU34 O-methylase TrmR/YrrM is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 443298 Cd Length: 173 Bit Score: 56.35 E-value: 9.91e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 102 RVLEAGAGSGALSLNLLRAIGPDGKLISYEVREDHIEHAERNVIDFmgAKPDNWDLRLGDLNEATEESLGGPVDRVILD- 180
Cdd:COG4122 19 RILEIGTGTGYSTLWLARALPDDGRLTTIEIDPERAAIARENFARA--GLADRIRLILGDALEVLPRLADGPFDLVFIDa 96
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 922845115 181 --MLAPwECLDTVSKVLQPGGVLMV-------YVATVPQLMKVMEGIRE 220
Cdd:COG4122 97 dkSNYP-DYLELALPLLRPGGLIVAdnvlwhgRVADPARRDPSTRAIRE 144
|
|
| Methyltransf_31 |
pfam13847 |
Methyltransferase domain; This family appears to have methyltransferase activity. |
97-203 |
1.82e-08 |
|
Methyltransferase domain; This family appears to have methyltransferase activity.
Pssm-ID: 463998 [Multi-domain] Cd Length: 150 Bit Score: 52.42 E-value: 1.82e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 97 IFPGARVLEAGAGSGALSLNLLRAIGPDGKLISYEVREDHIEHAERNVIDFmgaKPDNWDLRLGDLNEATEESLGGPVD- 175
Cdd:pfam13847 1 IDKGMRVLDLGCGTGHLSFELAEELGPNAEVVGIDISEEAIEKARENAQKL---GFDNVEFEQGDIEELPELLEDDKFDv 77
|
90 100 110
....*....|....*....|....*....|..
gi 922845115 176 ----RVILDMLAPWECLDTVSKVLQPGGVLMV 203
Cdd:pfam13847 78 visnCVLNHIPDPDKVLQEILRVLKPGGRLII 109
|
|
| UbiE |
COG2226 |
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ... |
99-220 |
2.29e-07 |
|
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis
Pssm-ID: 441828 [Multi-domain] Cd Length: 143 Bit Score: 49.22 E-value: 2.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 99 PGARVLEAGAGSGALSLNLLRAigpDGKLISYEVREDHIEHAERNVidfmGAKPDNWDLRLGDLneateESL---GGPVD 175
Cdd:COG2226 22 PGARVLDLGCGTGRLALALAER---GARVTGVDISPEMLELARERA----AEAGLNVEFVVGDA-----EDLpfpDGSFD 89
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 922845115 176 RVIL-----DMLAPWECLDTVSKVLQPGGVLMVYVATVPQLMKVMEGIRE 220
Cdd:COG2226 90 LVISsfvlhHLPDPERALAEIARVLKPGGRLVVVDFSPPDLAELEELLAE 139
|
|
| Cfa |
COG2230 |
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport ... |
99-206 |
6.90e-07 |
|
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism];
Pssm-ID: 441831 [Multi-domain] Cd Length: 158 Bit Score: 48.00 E-value: 6.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 99 PGARVLEAGAGSGALSLNLLRAIGpdGKLISYEVREDHIEHAERNvIDFMGAkPDNWDLRLGDLNEATEEslgGPVDRVI 178
Cdd:COG2230 51 PGMRVLDIGCGWGGLALYLARRYG--VRVTGVTLSPEQLEYARER-AAEAGL-ADRVEVRLADYRDLPAD---GQFDAIV 123
|
90 100 110
....*....|....*....|....*....|....*
gi 922845115 179 -LDML-----APW-ECLDTVSKVLQPGGVLMVYVA 206
Cdd:COG2230 124 sIGMFehvgpENYpAYFAKVARLLKPGGRLLLHTP 158
|
|
| SmtA |
COG0500 |
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, ... |
99-278 |
7.15e-07 |
|
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only];
Pssm-ID: 440266 [Multi-domain] Cd Length: 199 Bit Score: 48.76 E-value: 7.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 99 PGARVLEAGAGSGALSLNLLRAIGpdGKLISYEVREDHIEHAERNVIdfmGAKPDNWDLRLGDLNEATEESLgGPVDRVI 178
Cdd:COG0500 26 KGGRVLDLGCGTGRNLLALAARFG--GRVIGIDLSPEAIALARARAA---KAGLGNVEFLVADLAELDPLPA-ESFDLVV 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 179 LDMLAPW-------ECLDTVSKVLQPGGVLMVyVATVPQLMKVMEGireqkcyTEPRAWESLVRDWNVK-DLSVRPAHRM 250
Cdd:COG0500 100 AFGVLHHlppeereALLRELARALKPGGVLLL-SASDAAAALSLAR-------LLLLATASLLELLLLLrLLALELYLRA 171
|
170 180
....*....|....*....|....*...
gi 922845115 251 QAHTAFLVWARRLADGTVPPRPQRRNQK 278
Cdd:COG0500 172 LLAAAATEDLRSDALLESANALEYLLSK 199
|
|
| PCMT |
pfam01135 |
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); |
96-205 |
1.68e-06 |
|
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);
Pssm-ID: 395902 [Multi-domain] Cd Length: 205 Bit Score: 47.75 E-value: 1.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 96 DIFPGARVLEAGAGSGALSLNLLRAIGPDGKLISYEVREDHIEHAERNVidfMGAKPDNWDLRLGDLNEATEESlgGPVD 175
Cdd:pfam01135 70 ELKPGMRVLEIGSGSGYLTACFARMVGEVGRVVSIEHIPELVEIARRNL---EKLGLENVIVVVGDGRQGWPEF--APYD 144
|
90 100 110
....*....|....*....|....*....|
gi 922845115 176 RVILDMLAPwECLDTVSKVLQPGGVLMVYV 205
Cdd:pfam01135 145 AIHVGAAAP-EIPEALIDQLKEGGRLVIPV 173
|
|
| UbiG |
COG2227 |
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ... |
92-203 |
5.64e-06 |
|
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 441829 [Multi-domain] Cd Length: 126 Bit Score: 44.62 E-value: 5.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 92 IVEGDIFPGARVLEAGAGSGALSLNLLRAigpdG-KLISYEVREDHIEHAERNvidfmgAKPDNWDLRLGDLNEATEEsl 170
Cdd:COG2227 17 LLARLLPAGGRVLDVGCGTGRLALALARR----GaDVTGVDISPEALEIARER------AAELNVDFVQGDLEDLPLE-- 84
|
90 100 110
....*....|....*....|....*....|....*...
gi 922845115 171 GGPVDRVI-LDMLA----PWECLDTVSKVLQPGGVLMV 203
Cdd:COG2227 85 DGSFDLVIcSEVLEhlpdPAALLRELARLLKPGGLLLL 122
|
|
| Methyltransf_25 |
pfam13649 |
Methyltransferase domain; This family appears to be a methyltransferase domain. |
103-199 |
2.24e-05 |
|
Methyltransferase domain; This family appears to be a methyltransferase domain.
Pssm-ID: 463945 [Multi-domain] Cd Length: 96 Bit Score: 42.17 E-value: 2.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 103 VLEAGAGSGALSLNLLRAIGpdGKLISYEVREDHIEHAERNVidfmGAKPDNWDLRLGDLNEATEESlgGPVDRVI---- 178
Cdd:pfam13649 1 VLDLGCGTGRLTLALARRGG--ARVTGVDLSPEMLERARERA----AEAGLNVEFVQGDAEDLPFPD--GSFDLVVssgv 72
|
90 100
....*....|....*....|....
gi 922845115 179 ---LDMLAPWECLDTVSKVLQPGG 199
Cdd:pfam13649 73 lhhLPDPDLEAALREIARVLKPGG 96
|
|
| Methyltransf_12 |
pfam08242 |
Methyltransferase domain; Members of this family are SAM dependent methyltransferases. |
104-201 |
1.21e-04 |
|
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
Pssm-ID: 400515 [Multi-domain] Cd Length: 98 Bit Score: 40.43 E-value: 1.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 104 LEAGAGSGALSLNLLRAIgPDGKLISYEVREDHIEHAERNVIDFMGAKPDNWDLRLGDLneatEESLGGPVD-----RVI 178
Cdd:pfam08242 1 LEIGCGTGTLLRALLEAL-PGLEYTGLDISPAALEAARERLAALGLLNAVRVELFQLDL----GELDPGSFDvvvasNVL 75
|
90 100
....*....|....*....|...
gi 922845115 179 LDMLAPWECLDTVSKVLQPGGVL 201
Cdd:pfam08242 76 HHLADPRAVLRNIRRLLKPGGVL 98
|
|
| CobL |
COG2242 |
Precorrin-6B methylase 2 [Coenzyme transport and metabolism]; Precorrin-6B methylase 2 is part ... |
96-220 |
1.56e-04 |
|
Precorrin-6B methylase 2 [Coenzyme transport and metabolism]; Precorrin-6B methylase 2 is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 441843 [Multi-domain] Cd Length: 403 Bit Score: 42.85 E-value: 1.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 96 DIFPGARVLEAGAGSGALSLNLLRAiGPDGKLISYEVREDHIEHAERNVIDFmGAkpDNWDLRLGDLNEATEEsLGGPvD 175
Cdd:COG2242 244 ALRPGDVLWDIGAGSGSVSIEAARL-APGGRVYAIERDPERAALIRANARRF-GV--PNVEVVEGEAPEALAD-LPDP-D 317
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 922845115 176 RVI-------LDMLapwecLDTVSKVLQPGGVLMVYVATVPQLMKVMEGIRE 220
Cdd:COG2242 318 AVFiggsggnLPEI-----LEACWARLRPGGRLVANAVTLETLALALEALAE 364
|
|
| PRK13942 |
PRK13942 |
protein-L-isoaspartate O-methyltransferase; Provisional |
96-223 |
1.93e-04 |
|
protein-L-isoaspartate O-methyltransferase; Provisional
Pssm-ID: 184409 Cd Length: 212 Bit Score: 41.54 E-value: 1.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 96 DIFPGARVLEAGAGSGALSLNLLRAIGPDGKLISYEVREDHIEHAERNVIDfMGAkpDNWDLRLGDLNEATEESlgGPVD 175
Cdd:PRK13942 73 DLKEGMKVLEIGTGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKK-LGY--DNVEVIVGDGTLGYEEN--APYD 147
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 922845115 176 RVILDMLAPwECLDTVSKVLQPGGVLMVYVATVPQ-LMKVME---GIREQKC 223
Cdd:PRK13942 148 RIYVTAAGP-DIPKPLIEQLKDGGIMVIPVGSYSQeLIRVEKdngKIIKKKL 198
|
|
| Tam |
COG4106 |
Trans-aconitate methyltransferase [Energy production and conversion]; |
99-205 |
3.42e-04 |
|
Trans-aconitate methyltransferase [Energy production and conversion];
Pssm-ID: 443282 [Multi-domain] Cd Length: 100 Bit Score: 39.04 E-value: 3.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 99 PGARVLEAGAGSGALSLNLLRAIgPDGKLISYEVREDHIEHAERNVidfmgakpDNWDLRLGDLNEATeesLGGPVDRVI 178
Cdd:COG4106 1 PPRRVLDLGCGTGRLTALLAERF-PGARVTGVDLSPEMLARARARL--------PNVRFVVADLRDLD---PPEPFDLVV 68
|
90 100 110
....*....|....*....|....*....|..
gi 922845115 179 LDMLAPW-----ECLDTVSKVLQPGGVLMVYV 205
Cdd:COG4106 69 SNAALHWlpdhaALLARLAAALAPGGVLAVQV 100
|
|
| PRK14968 |
PRK14968 |
putative methyltransferase; Provisional |
89-204 |
1.05e-03 |
|
putative methyltransferase; Provisional
Pssm-ID: 237872 [Multi-domain] Cd Length: 188 Bit Score: 39.11 E-value: 1.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 89 AQIIVEGdifPGARVLEAGAGSGALSLNLLRAigpDGKLISYEVREDHIEHAERN------------VID---FMGAKPD 153
Cdd:PRK14968 16 AENAVDK---KGDRVLEVGTGSGIVAIVAAKN---GKKVVGVDINPYAVECAKCNaklnnirnngveVIRsdlFEPFRGD 89
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 922845115 154 NWDLRL-------GDLNEATEESL-----GGPVDRVILDMLapwecLDTVSKVLQPGG-VLMVY 204
Cdd:PRK14968 90 KFDVILfnppylpTEEEEEWDDWLnyalsGGKDGREVIDRF-----LDEVGRYLKPGGrILLLQ 148
|
|
| TrmN6 |
COG4123 |
tRNA1(Val) A37 N6-methylase TrmN6 [Translation, ribosomal structure and biogenesis]; tRNA1(Val) ... |
99-178 |
1.51e-03 |
|
tRNA1(Val) A37 N6-methylase TrmN6 [Translation, ribosomal structure and biogenesis]; tRNA1(Val) A37 N6-methylase TrmN6 is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 443299 [Multi-domain] Cd Length: 238 Bit Score: 38.97 E-value: 1.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 99 PGARVLEAGAGSGALSLnLLRAIGPDGKLISYEVREDHIEHAERNVIDfmgakpDNWDLRL----GDLNEATEESLGGPV 174
Cdd:COG4123 37 KGGRVLDLGTGTGVIAL-MLAQRSPGARITGVEIQPEAAELARRNVAL------NGLEDRItvihGDLKEFAAELPPGSF 109
|
....
gi 922845115 175 DRVI 178
Cdd:COG4123 110 DLVV 113
|
|
| COG2263 |
COG2263 |
Predicted RNA methylase [General function prediction only]; |
88-178 |
1.57e-03 |
|
Predicted RNA methylase [General function prediction only];
Pssm-ID: 441864 [Multi-domain] Cd Length: 199 Bit Score: 38.73 E-value: 1.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 88 AAQIIVE----GDIfPGARVLEAGAGSGALSLNLLRAiGPDgKLISYEVREDHIEHAERNVIDFMGakpdNWDLRLGDln 163
Cdd:COG2263 31 AAELLHLaylrGDI-EGKTVLDLGCGTGMLAIGAALL-GAK-KVVGVDIDPEALEIARENAERLGV----RVDFIRAD-- 101
|
90
....*....|....*
gi 922845115 164 eATEESLGGPVDRVI 178
Cdd:COG2263 102 -VTRIPLGGSVDTVV 115
|
|
| PRK08317 |
PRK08317 |
hypothetical protein; Provisional |
96-199 |
6.09e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 181382 [Multi-domain] Cd Length: 241 Bit Score: 37.22 E-value: 6.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 96 DIFPGARVLEAGAGSGALSLNLLRAIGPDGKLISYEVREDHIEHAERNVidfmGAKPDNWDLRLGDlneatEESLG---G 172
Cdd:PRK08317 16 AVQPGDRVLDVGCGPGNDARELARRVGPEGRVVGIDRSEAMLALAKERA----AGLGPNVEFVRGD-----ADGLPfpdG 86
|
90 100 110
....*....|....*....|....*....|....
gi 922845115 173 PVDRVILDMLApwECLDTVSK-------VLQPGG 199
Cdd:PRK08317 87 SFDAVRSDRVL--QHLEDPARalaeiarVLRPGG 118
|
|
| COG3963 |
COG3963 |
Phosphatidylethanolamine N-methyltransferase [Lipid transport and metabolism]; |
102-216 |
6.21e-03 |
|
Phosphatidylethanolamine N-methyltransferase [Lipid transport and metabolism];
Pssm-ID: 443163 Cd Length: 193 Bit Score: 36.73 E-value: 6.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922845115 102 RVLEAGAGSGALSLNLLRAIGPDGKLISYEVREDHIEHAER-----NVIDfMGAkpdnwdlrlGDLNEATEESLGGPVDR 176
Cdd:COG3963 48 PVVELGPGTGVFTRAILARGVPDARLLAVEINPEFAEHLRRrfprvTVVN-GDA---------EDLAELLAEHGIGKVDA 117
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 922845115 177 VI--LdmlaPW---------ECLDTVSKVLQPGGVLMV--YVATVPQLMKVME 216
Cdd:COG3963 118 VVsgL----PLlsfppelrrAILDAAFRVLAPGGVFVQftYSPRSPVPRKLLR 166
|
|
|