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Conserved domains on  [gi|780535834|gb|AJY97735|]
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Protein of unknown function (DUF2628) [Xanthomonas citri pv. citri]

Protein Classification

DUF2628 domain-containing protein( domain architecture ID 10566996)

DUF2628 domain-containing protein similar to Escherichia coli protein YigF, which may be located in the inner membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2628 pfam10947
Protein of unknown function (DUF2628); Some members in this family of proteins are annotated ...
 47-112 1.31e-10

Protein of unknown function (DUF2628); Some members in this family of proteins are annotated as yigF however currently no function is known.


:

Pssm-ID: 431552  Cd Length: 78  Bit Score: 53.40  E-value: 1.31e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 780535834   47 GMNFYALFFGFIYFFILGLWRKALGLIGIGLVVGIVASFL--PASIGNALSIPLALLGGMSANYAYYL 112
Cdd:pfam10947   9 GFNFWAFFFGPFWLLYRRLWLAALGYLGLAVAVDAVLAVLgfPDAVRFLVGLLIAILYGLEANSLYYW 76
 
Name Accession Description Interval E-value
DUF2628 pfam10947
Protein of unknown function (DUF2628); Some members in this family of proteins are annotated ...
 47-112 1.31e-10

Protein of unknown function (DUF2628); Some members in this family of proteins are annotated as yigF however currently no function is known.


Pssm-ID: 431552  Cd Length: 78  Bit Score: 53.40  E-value: 1.31e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 780535834   47 GMNFYALFFGFIYFFILGLWRKALGLIGIGLVVGIVASFL--PASIGNALSIPLALLGGMSANYAYYL 112
Cdd:pfam10947   9 GFNFWAFFFGPFWLLYRRLWLAALGYLGLAVAVDAVLAVLgfPDAVRFLVGLLIAILYGLEANSLYYW 76
 
Name Accession Description Interval E-value
DUF2628 pfam10947
Protein of unknown function (DUF2628); Some members in this family of proteins are annotated ...
 47-112 1.31e-10

Protein of unknown function (DUF2628); Some members in this family of proteins are annotated as yigF however currently no function is known.


Pssm-ID: 431552  Cd Length: 78  Bit Score: 53.40  E-value: 1.31e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 780535834   47 GMNFYALFFGFIYFFILGLWRKALGLIGIGLVVGIVASFL--PASIGNALSIPLALLGGMSANYAYYL 112
Cdd:pfam10947   9 GFNFWAFFFGPFWLLYRRLWLAALGYLGLAVAVDAVLAVLgfPDAVRFLVGLLIAILYGLEANSLYYW 76
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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