|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-227 |
1.48e-109 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 318.31 E-value: 1.48e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 1 TISSNHWMMAWTGLEINTLAIIPLISKSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQLTQPTASILLT 80
Cdd:MTH00112 20 TISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWNTGQWDITQLTNPTSCTLLT 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 81 TAISMKLGLVPFHFWFPEVLQGTSPITALLLSTMMKLPPITILMMTTHSLNPTLLTTLAILSAALGGWMGLNQTQLRKIL 160
Cdd:MTH00112 100 LALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAILSTLIGGWGGLNQTQLRKIM 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 727099817 161 AFSSISHLGWITIIMTYDPKLMLLAFFLYCLTTIPIFLTINTTKTLKLTTMMTSWTKTPAMNAALML 227
Cdd:MTH00112 180 AFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLNTTLML 246
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-227 |
1.58e-86 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 259.74 E-value: 1.58e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 1 TISSNHWMMAWTGLEINTLAIIPLISKSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQLTQPTASILLT 80
Cdd:MTH00135 20 TFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDIQQMSHPLPTTMIT 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 81 TAISMKLGLVPFHFWFPEVLQGTSPITALLLSTMMKLPPItILMMTTHSLNPTLLTTLAILSAALGGWMGLNQTQLRKIL 160
Cdd:MTH00135 100 LALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPF-ALILQIAPTNPTLLITLGLTSTLVGGWGGLNQTQLRKIL 178
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 727099817 161 AFSSISHLGWITIIMTYDPKLMLLAFFLYCLTTIPIFLTINTTKTLKLTTMMTSWTKTPAMNAALML 227
Cdd:MTH00135 179 AYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALTALTPL 245
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-227 |
5.86e-86 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 258.31 E-value: 5.86e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 1 TISSNHWMMAWTGLEINTLAIIPLISKSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQLTQPTASILLT 80
Cdd:MTH00070 20 TLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWFTGEWTIMNMQTPLPTIMLT 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 81 TAISMKLGLVPFHFWFPEVLQGTSPITALLLSTMMKLPPITILMMTTHSLNPTLLTTLAILSAALGGWMGLNQTQLRKIL 160
Cdd:MTH00070 100 IALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLLSTLIGGWGGLNQTQLRKIM 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 727099817 161 AFSSISHLGWITIIMTYDPKLMLLAFFLYCLTTIPIFLTINTTKTLKLTTMMTSWTKTPAMNAALML 227
Cdd:MTH00070 180 AYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTLTSMMML 246
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-227 |
7.58e-81 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 245.14 E-value: 7.58e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 1 TISSNHWMMAWTGLEINTLAIIPLISKSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQLTQPTASILLT 80
Cdd:MTH00105 20 TMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMYSGQWTITKLTNPTASTLMT 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 81 TAISMKLGLVPFHFWFPEVLQGTSPITALLLSTMMKLPPITILMMTTHSLNPTLLTTLAILSAALGGWMGLNQTQLRKIL 160
Cdd:MTH00105 100 IALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAILSILIGGWGGLNQTQLRKIL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 727099817 161 AFSSISHLGWITIIMTYDPKLMLLAFFLYCLTTIPIFLTINTTKTLKLTTMMTSWTKTPAMNAALML 227
Cdd:MTH00105 180 AYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLMTSLILL 246
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-227 |
1.17e-64 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 204.05 E-value: 1.17e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 1 TISSNHWMMAWTGLEINTLAIIPLISKSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQLTQPTASILLT 80
Cdd:MTH00200 20 TFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISEMLGPLSETLIL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 81 TAISMKLGLVPFHFWFPEVLQGTSPITALLLSTMMKLPPITILMMTTHSLNPTLLTTLAILSAALGGWMGLNQTQLRKIL 160
Cdd:MTH00200 100 LALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLLSVLVGGWGGLNQTQLRKIL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 727099817 161 AFSSISHLGWITIIMTYDPKLMLLAFFLYCLTTIPIFLTINTTKTLKLTTMMTSWTKTPAMNAALML 227
Cdd:MTH00200 180 AYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPILSMLLGL 246
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
2-201 |
3.74e-64 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 202.47 E-value: 3.74e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 2 ISSNHWMMAWTGLEINTLAIIPLISKSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQLTQPTASILLTT 81
Cdd:MTH00041 21 ISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPLNTLSSIIITL 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 82 AISMKLGLVPFHFWFPEVLQGTSPITALLLSTMMKLPPITILMMTTHSLNPTLLTTLAILSAALGGWMGLNQTQLRKILA 161
Cdd:MTH00041 101 ALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGLNQTQTRKILA 180
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 727099817 162 FSSISHLGWITIIMTYDPKLMLLAFFLYCLTTIPIFLTIN 201
Cdd:MTH00041 181 FSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGN 220
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-227 |
3.24e-42 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 145.74 E-value: 3.24e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 1 TISSNHWMMAWTGLEINTLAIIPLISKSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWhtgqwdISQLTQPTASILLT 80
Cdd:MTH00160 21 SISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML------NLMLFNNISSMLIN 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 81 TAISMKLGLVPFHFWFPEVLQGTSPITALLLSTMMKLPPITILMMTThslNPTLLTTLAILSAALGGWMGLNQTQLRKIL 160
Cdd:MTH00160 95 SSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLI---NNNFIIIIIILSAIIGAIGGLNQTSLRKIL 171
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 727099817 161 AFSSISHLGWITIIMTYDPKLMLLAFFLYCLTTIPIFLTINTTKTLKLTTMMTSWTKTPAMNAALML 227
Cdd:MTH00160 172 AYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFL 238
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
2-198 |
4.16e-39 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 137.32 E-value: 4.16e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 2 ISSNHWMMAWTGLEINTLAIIPLISKSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISqltqptasILLTT 81
Cdd:MTH00144 21 LSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM--------SLLLL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 82 AISMKLGLVPFHFWFPEVLQGTSPITALLLSTMMKLPPI-TILMMTTHSLNPTLLTTLAILSAALGGWMGLNQTQLRKIL 160
Cdd:MTH00144 93 GLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLfLLSNFLDLYWLAYLLCVISVLSALVGSIGGLNQTQVRALL 172
|
170 180 190
....*....|....*....|....*....|....*...
gi 727099817 161 AFSSISHLGWITIIMTYDPKLMLLAFFLYCLTTIPIFL 198
Cdd:MTH00144 173 AYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFF 210
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-201 |
1.38e-36 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 130.67 E-value: 1.38e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 1 TISSNHWMMAWTGLEINTLAIIPLISKSHHPRATEAAIKYFLVQAAASTLLLFSSTInawhtgQWDISQLTQPTASILLT 80
Cdd:MTH00011 22 ALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM------MWSFPSLLKNITALMLL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 81 TAISMKLGLVPFHFWFPEVLQGTSPITALLLSTMMKLPPITILMMTTHSLNPTLLTTLAILSAALGGWMGLNQTQLRKIL 160
Cdd:MTH00011 96 VSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMNQTQLRPLL 175
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 727099817 161 AFSSISHLGWITIIMTYDPKLMLLAFFLYCLTTIPIFLTIN 201
Cdd:MTH00011 176 AYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFA 216
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
2-198 |
1.50e-27 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 106.68 E-value: 1.50e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 2 ISSNHWMMAWTGLEINTLAIIPLISKSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQLtqptasiLLTT 81
Cdd:MTH00197 15 LSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNLYLSLLSVV-------LVIL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 82 AISMKLGLVPFHFWFPEVLQGTSPITALLLSTMMKLPPITILMMTTHslNPTLLTTLAILSAALGGWMGLNQTQLRKILA 161
Cdd:MTH00197 88 GLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGIGGMNQSNIRQLLA 165
|
170 180 190
....*....|....*....|....*....|....*..
gi 727099817 162 FSSISHLGWITIIMTYDPKLMLLAFFLYCLTTIPIFL 198
Cdd:MTH00197 166 YSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFL 202
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
2-200 |
1.50e-22 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 94.80 E-value: 1.50e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 2 ISSNHWMMAWTGLEINTLAIIPLIS-KSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQLTQPTAS---- 76
Cdd:COG1007 119 ASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAALAAggan 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 77 --------ILLTTAISMKLGLVPFHFWFPEVLQGTSPITALLLSTMMKL----PPITILMMTTHSLNP---TLLTTLAIL 141
Cdd:COG1007 199 spllllglVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLAAdwqLLLAVLAVL 278
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 727099817 142 SAALGGWMGLNQTQLRKILAFSSISHLGWITI-IMTYDP---KLMLLAFFLYCLTTIPIFLTI 200
Cdd:COG1007 279 SMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLgLAAGTPlgvSAALFYLLAYLFMNLGAFAVI 341
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
4-201 |
3.25e-22 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 91.99 E-value: 3.25e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 4 SNHWMMAWTGLEINTLAIIPLI-SKSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQL-----------T 71
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 72 QPTASILLTTAISMKLGLVPFHFWFPEVLQGTS-PITALLLSTMMKLPPITILMMTT--HSLNPT---LLTTLAILSAAL 145
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPtPVSALLAATLVKAGGYGLIRRSLlyLPSSPFiqqILLILAIISMLL 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 146 GGWMGLNQTQLRKILAFSSISHLGWITIIM----TYDPKLMLLAFFLYCLTTIPIFLTIN 201
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAG 220
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
2-171 |
5.96e-21 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 90.46 E-value: 5.96e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 2 ISSNHWMMAWTGLEINTLAIIPLIS-KSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDI----SQLTQPTAS 76
Cdd:MTH00199 114 VSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginSILTGDVGK 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 77 ILLTTAISMKLGLVPFHFWFPEVLQGTSPITALLLSTMMKLPPITILMMTTHSLNPTLLTtlAILSAALGGWMGLNQTQL 156
Cdd:MTH00199 194 ILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYGAIGALNQTKI 271
|
170
....*....|....*
gi 727099817 157 RKILAFSSISHLGWI 171
Cdd:MTH00199 272 KRLLAYSGIGHMGFI 286
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
2-171 |
1.47e-20 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 89.11 E-value: 1.47e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 2 ISSNHWMMAWTGLEINTLAIIPLIS-KSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQLTQPTAS---- 76
Cdd:PRK05777 120 VSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALADgsgn 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 77 --------ILLTTAISMKLGLVPFHFWFPEVLQGTSPITALLLSTMMKL----PPITILMMTTHSLNPT---LLTTLAIL 141
Cdd:PRK05777 200 sllllfglVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaVLLRLLVVAFGGLSEDwqqVLAIIAIA 279
|
170 180 190
....*....|....*....|....*....|
gi 727099817 142 SAALGGWMGLNQTQLRKILAFSSISHLGWI 171
Cdd:PRK05777 280 SMLVGNLAALSQTNIKRLLAYSSIAHAGYL 309
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
2-200 |
1.75e-19 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 85.47 E-value: 1.75e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 2 ISSNHWMMAWTGLEINTLAIIPLI-SKSHHPRATEAAIKYFLVQAAASTLLLFS-------------STINAWHTGQWDI 67
Cdd:MTH00196 10 ISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINLVLNSGQSF 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 68 SQLTQPTASILLTTAISMKLGLVPFHFWFPEVLQGTSPITALLLSTMMKLPPITILMMTthSLNPTLLTTLAILSAALGG 147
Cdd:MTH00196 90 SSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSI--GLNVNILLIGGLFSLFVGA 167
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 727099817 148 WMGLNQTQLRKILAFSSISHLGWITIIMTYDP----KLMLLAFFLYCLTTIPIFLTI 200
Cdd:MTH00196 168 IGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSII 224
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
2-197 |
4.99e-18 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 81.92 E-value: 4.99e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 2 ISSNHWMMAWTGLEINTLAIIPLIS-KSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQLTQ------PT 74
Cdd:TIGR01770 119 VSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLflsngmLN 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 75 ASILLTTAISM------KLGLVPFHFWFPEVLQGTSPITALLLSTMMKLPPITILM-------MTTHSLNPTLLTTLAIL 141
Cdd:TIGR01770 199 ISLLLLGIVLIlvgllfKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFSEAWQIFLAIIAFL 278
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 142 SAALGGWMGLNQTQLRKILAFSSISHLGWITIIMTYDPKL----MLLAFFLYCLTTIPIF 197
Cdd:TIGR01770 279 SMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEgikaVLFYIFIYALMSLGAF 338
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
11-173 |
3.44e-17 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 79.42 E-value: 3.44e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 11 WTGLEINTLAIIPLISKSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQLTQ----------PTASILLT 80
Cdd:COG0651 133 FVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAArlaeldpgllLAAFALLL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 81 TAISMKLGLVPFHFWFPEVL-QGTSPITALLLSTMMKLPPITILMMTTHSLNP-------TLLTTLAILSAALGGWMGLN 152
Cdd:COG0651 213 VGFGIKAALFPLHFWLPDAYpAAPSPVSALLSGLLTKVGVYAILRVLTLLFGAdpalflgTLLLVLGLLTMLVGALGALA 292
|
170 180
....*....|....*....|.
gi 727099817 153 QTQLRKILAFSSISHLGWITI 173
Cdd:COG0651 293 QRDLKRLLAYSSVSQIGYILL 313
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
2-173 |
1.90e-14 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 71.81 E-value: 1.90e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 2 ISSNHWMMAWTGLEINTLAIIPLISKSHHPRAT---------EAAIKYFLVQAAASTLLLFSSTINAWHTGQ----WDIS 68
Cdd:MTH00198 205 IESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNegmlGTIL 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 69 QLTQPTASILL----------TTAISMKLGLVPFHFWFPEVLQGTSPITALLLSTMMKLppITILMMTTHSLNPTLLTTL 138
Cdd:MTH00198 285 SATLETTNIELrqgslgylfiTVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITSKLLLSV 362
|
170 180 190
....*....|....*....|....*....|....*
gi 727099817 139 AILSAALGGWMGLNQTQLRKILAFSSISHLGWITI 173
Cdd:MTH00198 363 AIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILI 397
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
31-173 |
2.25e-12 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 65.46 E-value: 2.25e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 31 PRATEAAIKYFLVQAAASTLLLFSST----INAWHTGQWDISQLTQPTASILLTTA-------ISMKLGLVPFHFWFPEV 99
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYGSSllygLSGGSTQLSAIALALITSPSLGLALAlvfviagIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 100 LQGT-SPITALLlSTMMKLP----PITILMMTTHSLNP---TLLTTLAILSAALGGWMGLNQTQLRKILAFSSISHLGWI 171
Cdd:PRK02504 237 YEGSpTPVVAFL-SVGSKAAgfalAIRLLVTAFPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFV 315
|
..
gi 727099817 172 TI 173
Cdd:PRK02504 316 MI 317
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
32-173 |
2.46e-12 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 65.41 E-value: 2.46e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 32 RATEAAIKYFLVQAAASTLLL--FSST--INAWHTGQWDI------SQLTQPTAS----ILLTTAISMKLGLVPFHFWFP 97
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFSWLygLSGGEIELQEIvnglinTQMYNSPGIsialIFITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 98 EVLQG-----------TSPITALLLSTMMklppITILMMTTHSLNPTLLTTLAILSAALGGWMGLNQTQLRKILAFSSIS 166
Cdd:CHL00049 239 DVYEGsptpvvaflsvTSKVAASALATRI----FDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIG 314
|
....*..
gi 727099817 167 HLGWITI 173
Cdd:CHL00049 315 QIGYVII 321
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
19-173 |
5.38e-12 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 64.33 E-value: 5.38e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 19 LAIIP---LISKSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQW--DISQLTQPTAS--------ILLTTAISM 85
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAAPLPltaqlllfLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 86 KLGLVPFHFWFPEVL-QGTSPITALLLSTMMKLP-------PITILMMTTHSLNPTLLTtLAILSAALGGWMGLNQTQLR 157
Cdd:COG1008 222 KVPMFPFHTWLPDAHvEAPTAGSVLLAGVLLKMGgygllrfALPLFPEASAYFAPLLAA-LGVIGIIYGALVALAQTDLK 300
|
170
....*....|....*.
gi 727099817 158 KILAFSSISHLGWITI 173
Cdd:COG1008 301 RLIAYSSVSHMGFVLL 316
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
29-173 |
9.19e-10 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 57.85 E-value: 9.19e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 29 HHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQLTQPTASIL---LTTAISM--------KLGLVPFHFWFP 97
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILsspLLTLILLllllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 98 EVLQGTSPITALLLS-TM--------MKLPPITilmmtthSLNPTLLTTLAILSAA---LGGWMGLNQTQLRKILAFSSI 165
Cdd:COG1009 236 DAMEGPTPVSALLHAaTMvkagvyllARLSPLF-------ALSPVWLTVVAIIGAItalFAALIALAQTDIKRVLAYSTV 308
|
....*...
gi 727099817 166 SHLGWITI 173
Cdd:COG1009 309 SQLGYMFL 316
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
61-185 |
1.85e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 57.24 E-value: 1.85e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 61 HTGQWDISQL-TQPTASILLTTAISM-------KLGLVPFHFWFPEVLQGTSPITALLLST-MMKLPPITILMMT----- 126
Cdd:PRK12644 183 AAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAaMVKAGIYLVARLApgfad 262
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 727099817 127 THSLNPTLLTtLAILSAALGGWMGLNQTQLRKILAFSSISHLGWITIIMTYDPKLMLLA 185
Cdd:PRK12644 263 VPVWRPTVLV-LGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALA 320
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-171 |
4.07e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 55.66 E-value: 4.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 14 LEINTLAIIPLISKSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQLTQP--------TASILLTTAISM 85
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGAlaenptvvTAFGFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 86 KLGLVPFHFWFPEVLQGTSPITALLLSTMMKLPPI-----------TILMMTTHSLNpTLLTTLAILSAALGGWMGLNQT 154
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVyaliriyftvfGGDFRFALGLG-WLLAVLALLSMLVGSLAALGQD 293
|
170
....*....|....*..
gi 727099817 155 QLRKILAFSSISHLGWI 171
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYI 310
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
10-171 |
4.19e-09 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 56.20 E-value: 4.19e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 10 AWtglEINTLAIIPLISKSHhPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQ------------LTQPTAsI 77
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGilhsdvwaekpgLTTVVA-V 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 78 LLTTAISMKLGLVPFHFWFPEVLQGTSPITALLLSTMMKLPPITILMM--TTHSLNPT---LLTTLAILSAALGGWMGLN 152
Cdd:PRK12650 213 LIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRfsPVFHDVAVwnwLLIIVGMITALMGAVFAVQ 292
|
170
....*....|....*....
gi 727099817 153 QTQLRKILAFSSISHLGWI 171
Cdd:PRK12650 293 KTDLKKLTAYSTVSQLGWI 311
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-171 |
2.78e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 53.56 E-value: 2.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 14 LEINTLAIIPLIS-KSHHPRATEAAIKYFLVQAAASTLLLFSSTInawHTGQWD----------ISQLTQPTASI---LL 79
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGIAL---LYGQYGtlnmaylavkMSENPTVVAKIalaLF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 80 TTAISMKLGLVPFHFWFPEVL-QGTSPITALLLstMMKLPPITILMMTTHSL-NPTLLTT--------LAILSAALGGWM 149
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYpAAPSSISAMLL--VIKQAGLYALARVLFSIyGPAINLAtvgwviiiLGCLTMFVGVAM 304
|
170 180
....*....|....*....|..
gi 727099817 150 GLNQTQLRKILAFSSISHLGWI 171
Cdd:PRK08376 305 AVVQKDVKRLLAYHSVSQIGYM 326
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
34-173 |
2.82e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 53.58 E-value: 2.82e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 34 TEAAIKYFLVQAAASTLLLFSSTINAW-HTGQWDISQLTQPTAS-----ILLTTAISMKLGLVPFHFWFPEVLQGT-SPI 106
Cdd:PRK08667 160 TQRAGIFYFVMTQLSTVFLMLGIIVLFiQTGSFELSPLGASAGIlslvfLLLFLGFGIKAGIIPFHKWLPYAHPASpSNV 239
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 727099817 107 TALLLSTMMKLPPITILMMTTHSLNP-----TLLTTLAILSAALGGWMGLNQTQLRKILAFSSISHLGWITI 173
Cdd:PRK08667 240 SALMSGVMLKVAVYGLVRFLMDVLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILM 311
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-171 |
4.53e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 52.65 E-value: 4.53e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 14 LEINTLAIIPLISKSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQLTQ--PTASILLTTAISMKLGLVP 91
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 92 FHFWFPEVLQGTSPITALLLSTMMKLPPITILMMTTHSLNPT--LLTTLAILSAALGGWMGLNQTQLRKILAFSSISHLG 169
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
..
gi 727099817 170 WI 171
Cdd:PRK07234 283 FI 284
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
24-189 |
7.34e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 52.23 E-value: 7.34e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 24 LISKSHH-PRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQLTQ-----------PTASILLTTAISMKLGLVP 91
Cdd:PRK12647 134 LIGFNHErEAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLAsgdvirehplyLAILLLVLGGAFTKSAQFP 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 92 FHFWFPEVLQGTSPITALLLS-TMMKLPpITILMMTTHSLNPTLL--TTLAILSAA---LGGWMGLNQTQLRKILAFSSI 165
Cdd:PRK12647 214 FHFWLPNAMEAPTPVSAYLHSaTMVKAG-IYLLARLNPVLGGTPLwqTILPLFGGLtmlTGALLAVRQTDLKLILAYSTV 292
|
170 180
....*....|....*....|....
gi 727099817 166 SHLGWITIIMTYDPKLMLLAFFLY 189
Cdd:PRK12647 293 SALGTLVMLLGLGSELAIKAAVLF 316
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
36-173 |
1.77e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 51.09 E-value: 1.77e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 36 AAIKYFLVQAAASTLLLFSSTINAWHTG---------QWDISQLTQPTASILLTTAISMKLGLVPFHFWFPEV-LQGTSP 105
Cdd:TIGR01972 157 AAMKFFLYTLAGSLLMLLAILGLYFLGGgtfdllellNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAhVEAPTA 236
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 727099817 106 ITALLLSTMMKLPPITI------LMMTTHSLNPTLLTTLAILSAALGGWMGLNQTQLRKILAFSSISHLGWITI 173
Cdd:TIGR01972 237 GSVILAGVLLKMGTYGFlrfnlpLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
19-185 |
5.12e-07 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 49.70 E-value: 5.12e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 19 LAIIPL---ISKSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTG--QWDISQL--------TQPTASILLTTAISM 85
Cdd:PRK06473 138 LELIPLyllIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshtlplsTQLLLLAPILVGFGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 86 KLGLVPFHFWFPEV-LQGTSPITALLLSTMMKLPPITIL------MMTTHSLNPTLLTTLAILSAALGGWMGLNQTQLRK 158
Cdd:PRK06473 218 KIPLVPFHTWLPDAhVEASTPVSVLLAGVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKK 297
|
170 180
....*....|....*....|....*..
gi 727099817 159 ILAFSSISHLGWITIIMTYDPKLMLLA 185
Cdd:PRK06473 298 MVAYSSIGHMGYILLAAAAATPLSILA 324
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
1-173 |
1.76e-06 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 48.00 E-value: 1.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 1 TISSNHWMMAWTGLEINTLAIIPLISKSHHPRATEAAIKYFLV------QAAASTLLLFSS--------------TINAW 60
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIIcsvgvaFALFGTILVYANaatvmgdgemailwTELLK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 61 HTGQWDiSQLTQpTASILLTTAISMKLGLVPFHFWFPEV-LQGTSPITALLLSTMMK---LPPITILMMTTHSLNP---- 132
Cdd:PRK06458 204 HASLLD-PTLMK-LAFVFLLIGFGTKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNvalYAVLRYYILIDAAIGSdfpg 281
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 727099817 133 TLLTTLAILSAALGGWMGLNQTQLRKILAFSSISHLGWITI 173
Cdd:PRK06458 282 RLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAF 322
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
33-175 |
2.79e-06 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 47.33 E-value: 2.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 33 ATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQLTQPTASILLTTAISMKLGLV----------------PFHFWF 96
Cdd:PRK07376 171 AADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLlcilvflgpmaksaqfPLHVWL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 97 PEVLQGTSPITALLLSTMMKLPPITIL--MMTTHSLNPTLLTTLAI---LSAALGGWMGLNQTQLRKILAFSSISHLGWI 171
Cdd:PRK07376 251 PDAMEGPTPISALIHAATMVAAGVFLVarMYPVFEQFPAVMTVIAWtgaITAFLGASIALTQNDIKKGLAYSTISQLGYM 330
|
....
gi 727099817 172 TIIM 175
Cdd:PRK07376 331 VMAM 334
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
4-173 |
4.50e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 46.67 E-value: 4.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 4 SNHWMMAWTGLEINTLAIIPLISKSHHPRATEAAIKYFLVQAAA------STLLLFSSTINAWHTGQWDISQLTQPT--- 74
Cdd:PRK08676 121 SDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNWTELAAHAsll 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 75 -------ASILLTTAISMKLGLVPFHFWFPEV-LQGTSPITALLLSTMMKLPPITILMMT-------THSLNPTLLTTLA 139
Cdd:PRK08676 201 spsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSallrqsgAAEQFSNVLIGLG 280
|
170 180 190
....*....|....*....|....*....|....
gi 727099817 140 ILSAALGGWMGLNQTQLRKILAFSSISHLGWITI 173
Cdd:PRK08676 281 IFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLL 314
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
36-173 |
9.07e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 45.96 E-value: 9.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 36 AAIKYFLVQAAASTLLLFS----STINAWHTGQWDISQLTQPTASILLTT--------AISMKLGLVPFHFWFPEV-LQG 102
Cdd:PRK05846 162 AATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIADLLNLPLPPGVQYwlflaffiAFAVKMPMFPLHTWLPDAhVQA 241
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 727099817 103 TSPITALLLSTMMKLPP-------ITILMMTTHSLNPtLLTTLAILSAALGGWMGLNQTQLRKILAFSSISHLGWITI 173
Cdd:PRK05846 242 PTAGSVLLAGILLKMGAygllrfsLPLFPDASHEFAP-IIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTL 318
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
14-177 |
1.13e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 45.35 E-value: 1.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 14 LEINTLAIIPLISKSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWD---ISQLTQPTASIL---LTTAISMKL 87
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFAlsaLSGLHGSLKYLVflgILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 88 GLVPFHFWFPEVLQGTSPITALLLSTMMKLPPITILMMTTHSLNP------TLLTTLAILSAALGGWMGLNQTQLRKILA 161
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170
....*....|....*.
gi 727099817 162 FSSISHLGWITIIMTY 177
Cdd:PRK06525 302 YSTITQLGYMFFGLSL 317
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
36-173 |
5.85e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 43.48 E-value: 5.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 36 AAIKYFLVQAAASTLLLFSSTINAWHTGQ--WDISQLTQ---PTASILLT-----TAISMKLGLVPFHFWFPEVL-QGTS 104
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLyagflIAFGVKLPIFPLHTWLPDAHgEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 727099817 105 PITALLLSTMMKLPPITILMMT------THSLNPTLLTTLAILSAALGGWMGLNQTQLRKILAFSSISHLGWITI 173
Cdd:PRK12561 218 PVSMILAGVLLKMGGYALIRFNvqmlpdAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLL 292
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
29-177 |
6.01e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 43.66 E-value: 6.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 29 HHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQLTQPTASI--------LLTTAISMKLGLV------PFHF 94
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIenikghplFLITLILIFIGAAaksaqgPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 95 WFPEVLQGTSPITALLLSTMMKLPPITILMMTTHSLNPT-----LLTTLAILSAALGGWMGLNQTQLRKILAFSSISHLG 169
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
....*...
gi 727099817 170 WITIIMTY 177
Cdd:PRK12649 316 YLMTMYGY 323
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
84-175 |
6.80e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 43.41 E-value: 6.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 84 SMKLGLvpfHFWFPEVLQGTSPITALLLSTMMKLPPITILMMTTHSLNPTLLTTLAI-----LSAALGGWMGLNQTQLRK 158
Cdd:MTH00032 239 SAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIItifgaLTAFFAATVGLVQNDLKK 315
|
90
....*....|....*..
gi 727099817 159 ILAFSSISHLGWITIIM 175
Cdd:MTH00032 316 VIAYSTCSQLGYMVLII 332
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
91-171 |
1.05e-04 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 42.82 E-value: 1.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 91 PFHFWFPEVLQGTSPITALLLSTMMKLPPITILMMTTHSLNPT-----LLTTLAILSAALGGWMGLNQTQLRKILAFSSI 165
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
....*.
gi 727099817 166 SHLGWI 171
Cdd:PRK12646 308 SQLGMI 313
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
15-173 |
1.18e-04 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 42.68 E-value: 1.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 15 EINTLA---IIPLISKshhpRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQLTQP-----------TASILLT 80
Cdd:PRK08668 128 EIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGlindtstgfalIVFLFLL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 81 TAISMKLGLVPFHFWFPEVLQGT-SPITALLLSTMMKLP------PITILMMT----------THSLNPTLLTTLAILSA 143
Cdd:PRK08668 204 AFGVAKAGIFPLHVWAPDAYSEApQSFSAVLSGQLSKLGaygfllVLYVLPGTklfsefgtyrGVPLFNYILAWLGNISI 283
|
170 180 190
....*....|....*....|....*....|
gi 727099817 144 ALGGWMGLNQTQLRKILAFSSISHLGWITI 173
Cdd:PRK08668 284 IVGTLMAILQEDIKKLIAYSSVANGGYILV 313
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
70-171 |
2.61e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 41.62 E-value: 2.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 70 LTQPTASILLTTAI---SMKLGLVPFHFWFPEVLQGTSPITALLLSTMM-KLPPITILMM-------TTHSLNPTLLTTL 138
Cdd:PRK07363 199 LSLNTQLILLTGLLlgfGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLaKLGTYGLLRFglqlfpqTWSLVAPGLAIIG 278
|
90 100 110
....*....|....*....|....*....|...
gi 727099817 139 AIlSAALGGWMGLNQTQLRKILAFSSISHLGWI 171
Cdd:PRK07363 279 TI-SVIYGALSAIAQKDIKRMVAYSSIGHMGYI 310
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
1-110 |
6.08e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 40.45 E-value: 6.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 1 TISSNHW---MMAW--TGLEINTLaiipLISKSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQLTQ--- 72
Cdd:PRK08168 116 LVLSDHLlvlIAAWaaISLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAhla 191
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 727099817 73 --------PTASILLTTAISMKLGLVPFHFWFPEVLQGTSPITALL 110
Cdd:PRK08168 192 aqgaspslQAAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALL 237
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
91-172 |
9.06e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 39.79 E-value: 9.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 91 PFHFWFPEVLQGTSPITALLLS-TMMKLppiTILMMTThsLNPTLLTT---LAILSAA------LGGWMGLNQTQLRKIL 160
Cdd:PRK12648 225 PFHFWLPHAMAAPTPVSAYLHSaTMVKA---GVFLLAR--LWPVLAGTeewFWIVGGAglitllLGAYFALFQHDLKGLL 299
|
90
....*....|..
gi 727099817 161 AFSSISHLGWIT 172
Cdd:PRK12648 300 AYSTISHLGLIT 311
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
14-171 |
1.15e-03 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 39.36 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 14 LEINTLAIIPLISKSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDISQLTQ------PTASILLTTAISMKL 87
Cdd:PRK08377 137 MEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQlagtidPTVAQVGLALLIFGL 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 88 G----LVPFHFWFPEVLQGTS-PITALLLSTMMK-----LPPITILMMTTHSLNPTL--LTTLAILSAALGGWMGLNQTQ 155
Cdd:PRK08377 217 AveaeLFPLNAWAPDAYQAAPhPITVMFSAFVVKaglyaMARILYLMQNANGWSSVLklVIIMATLTVFFAELSALRQKN 296
|
170
....*....|....*.
gi 727099817 156 LRKILAFSSISHLGWI 171
Cdd:PRK08377 297 VKRMIAYSSIGQVGMI 312
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
8-171 |
1.45e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 39.10 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 8 MMAWtglEINTLAIIPLISKSH-HPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDIS-----QLTQPTASILLTT 81
Cdd:PRK06521 139 LVAW---ETMSLSSWFLVIANHrEAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAamraaHLSPFWASLVFLL 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 82 AI---SMKLGLVPFHFWFPEVLQGT-SPITALLLSTMMKLPPITILMMTTHSLNPT------LLTTLAILSAALGGWMGL 151
Cdd:PRK06521 216 ALfgfGAKAGLVPLHVWLPRAHPAApSHVSALMSGVMLKVAIYGILRVVFDLLGAPgwwwgvLVLALGAISAVLGVLYAL 295
|
170 180
....*....|....*....|
gi 727099817 152 NQTQLRKILAFSSISHLGWI 171
Cdd:PRK06521 296 AEHDLKRLLAYSTIENIGII 315
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
36-173 |
3.28e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 38.15 E-value: 3.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 36 AAIKYFLVQAAASTLLLFSS----------TINAWHTGQWDISQLTQPTASILLTTAISMKLGLVPFHFWFPEVL-QGTS 104
Cdd:PRK02546 166 AATKFILYTAGSSLFILLAAlamafygdtpTFDMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHgEATA 245
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 727099817 105 PITALLLSTMMKLPPITILMMT------THSLNPTLLTTLAILSAALGGWMGLNQTQLRKILAFSSISHLGWITI 173
Cdd:PRK02546 246 PVHMLLAGILLKMGGYALLRMNagmlpdAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLI 320
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
50-169 |
4.28e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 37.62 E-value: 4.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 50 LLLFSSTINAWHTGQWDISQLTQPTASILLTTAISMKLGLVPFHFWFPEVLQGTSPITALLLSTMMKLPPITILMmtthS 129
Cdd:MTH00211 181 MVWLLLNLNSWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLI----R 256
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 727099817 130 LNPTLLTTLAILSAAL---------GGWMGLNQTQLRKILAFSSISHLG 169
Cdd:MTH00211 257 LSPLFQNNQLILGAVLllgaltmlfGALCALTQNDIKKIVAFSTTSQLG 305
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-174 |
4.89e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 37.45 E-value: 4.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 2 ISSNHWMMAWTGLEINTLAIIPLISKSHHPRATEAAIKYFLVQAAASTLLLFSSTINAWHTGQWDI----SQLTQPTASI 77
Cdd:PRK06591 132 IATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMtdiaAYLQEHTNSR 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 78 LLTTAIS-------MKLGLVPFHFWFPEVLQGTSPITALLL---STMM------KLPPITILMMTTHSLNPTLLTTLAIL 141
Cdd:PRK06591 212 IITIAIGffligaiLKTAFFPMHFWMMRAYNNTASVILVYLagiSTIIgiyiiyKFTYIIIGYETIKTAITNFIRPIALA 291
|
170 180 190
....*....|....*....|....*....|...
gi 727099817 142 SAALGGWMGLNQTQLRKILAFSSISHLGWITII 174
Cdd:PRK06591 292 TLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFLL 324
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
51-169 |
8.92e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 36.81 E-value: 8.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 51 LLFSSTINAWHTGQWDISQ--LTQPTASILLTTAI------SMKLGLvpfHFWFPEVLQGTSPITALLLSTMMKLPPITI 122
Cdd:MTH00066 180 LILSMAWLAMNTNSWELQQifLLNDNSTLPLLGLIlaaagkSAQFGL---HPWLPAAMEGPTPVSALLHSSTMVVAGIFL 256
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 727099817 123 L-----MMTThslNPTLLTT---LAILSAALGGWMGLNQTQLRKILAFSSISHLG 169
Cdd:MTH00066 257 LirfhpLLEN---NQTALTIclcLGALTTLFTAACALTQNDIKKIVAFSTSSQLG 308
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
91-171 |
9.40e-03 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 36.79 E-value: 9.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727099817 91 PFHFWFPEVLQGTSPITALL-LSTMMK---------LPPITIL--MMTTHSLnptllttLAILSAALGGWMGLNQTQLRK 158
Cdd:CHL00025 245 PLHVWLPDAMEGPTPISALIhAATMVAagiflvarlLPLFIVIpyIMNLISL-------IGIITALLGATLALAQKDIKR 317
|
90
....*....|...
gi 727099817 159 ILAFSSISHLGWI 171
Cdd:CHL00025 318 GLAYSTMSQLGYM 330
|
|
|