|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-376 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 621.53 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEPLVGYSSDKSQNMVLMGGLRKYVPITRTTFLWGTLS 80
Cdd:CHL00025 325 SQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLLGTLS 404
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 81 LCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNYSSTKEGSLYSISLWGKRIP 160
Cdd:CHL00025 405 LCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWGKEES 484
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 161 KGVNRDFILST--TKSGVSFFSQNISKIPGNTRNRIGSFSTSFGAKNTFVYPHETGNTMLFPLFILLLFTLFIGSIGIHF 238
Cdd:CHL00025 485 KKINKLLLLLTmnNNERVSFFSKKTYKIDGNVRNMIRSFITIFGNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPF 564
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 239 DNGVIDngiaeLTILSKWLTPSINFFQESSSSSINSYEFITNAISSVSLAIFGLFIAYIFYGSAYSFFQNLDFQNSLVKG 318
Cdd:CHL00025 565 NQEGID-----LDILSKWLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINSFVKG 639
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 703894280 319 SLKNTFSDQVKKKIYSWSYNRGYIDIFYTRVFTLGIRGLTELTQFFDKGVIDGITNGV 376
Cdd:CHL00025 640 GPKRIFLDKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGV 697
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
124-365 |
1.58e-101 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 300.30 E-value: 1.58e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 124 RIYLLTFDGYLRVHFQNYSSTKEGSLYSISLWGKRIPKGVNRDFIL-----STTKSGVSFFSQNISKIPGNTRNRIGSFS 198
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTlllltMNNNEKVSFFSKKTYRIDGNVRNMTRPFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 199 TS--FGAKNTFVYPHETGNTMLFPLFILLLFTLFIGSIGIHFDNGVIDngiaeLTILSKWLTPSINFFQESSSSSINSYE 276
Cdd:pfam01010 81 TIthFDNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGID-----LDILSKWLTPSINLLHKNSNNSVDWYE 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 277 FITNAISSVSLAIFGLFIAYIFYGSAYSFFQNLDFQNSLVKGSLKNTFSDQVKKKIYSWSYNRGYIDIFYTRVFTLGIRG 356
Cdd:pfam01010 156 FVTNAIFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRG 235
|
....*....
gi 703894280 357 LTELTQFFD 365
Cdd:pfam01010 236 LAELTHFFD 244
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-374 |
2.76e-67 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 224.52 E-value: 2.76e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEPLVGYSSDKSQNMVLMGGLRKYVPITRTTFLWGTLS 80
Cdd:PRK07376 325 SQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLA 404
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 81 LCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRvhfQNYSSTKEGSLysislwgkrip 160
Cdd:PRK07376 405 ISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEGEFR---GNDKELQKELL----------- 470
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 161 kgvnrdfilstTKSGVSFFSQNISKIPGNTRNRIGSfstsfgakntfvyPHETGNTMLFPLFILLLFTLFIGSIGIHFDN 240
Cdd:PRK07376 471 -----------AAADAPGHHEGHHEEHGEHHHHSGS-------------PHESPWTMTLPLVVLAVPSVLIGLLGTPWNN 526
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 241 ---GVIDNGiAELTILSKWLTPSinffqesssssinsyEFITNAISSVSLAIFGLFIAYIFYgsaysffqnldFQNSLVK 317
Cdd:PRK07376 527 rfeAFLHAP-GEALEAAAHFEWG---------------EFLILAGASVGIALIGITLASLMY-----------LLKKIDP 579
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 703894280 318 GSLKNTFsdqvkKKIYSWSYNRGYIDIFYTRVFTLGIRGLTELTQFFDKGVIDGITN 374
Cdd:PRK07376 580 AAIAERF-----PPLYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVN 631
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-376 |
3.42e-52 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 183.04 E-value: 3.42e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEplvgyssdkSQNMVLMGGLRKYVPITRTTFLWGTLS 80
Cdd:COG1009 309 SQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGALS 379
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 81 LCGIPPLACFWSKDEILSNSW---LYSPFFGIIASFTAGLTAFYMFRIYLLTFdgylrvhfqnysstkegslysislWGK 157
Cdd:COG1009 380 LAGIPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVF------------------------FGK 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 158 RIPKgvnrdfilsttksgvsffsqniskipgntrnrigsfstsfgaknTFVYPHETGNTMlfplfILLLFTLFIGSIGIh 237
Cdd:COG1009 436 PRPK--------------------------------------------TPKHPHESPWLM-----TLPLVVLAVLSLVL- 465
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 238 fdngvidnGIAELTILSKWLTPSINFFQESSSssinSYEFITNAISSVsLAIFGLFIAYIFYGSAYSFfqnlDFQNSLvk 317
Cdd:COG1009 466 --------GLLLPGLLEGLLAPAAVLGGELHL----AHGLLLNALPLL-LSLLGIALGYLLYLKRPLP----ALAERL-- 526
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 703894280 318 gslkntfsdqvkKKIYSWSYNRGYIDIFYTRVFTLGIRGLTELTqFFDKGVIDGITNGV 376
Cdd:COG1009 527 ------------KPLYRLLANKWYFDELYDALFVKPVRALARFL-WFDRYVIDGIVNGL 572
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-376 |
3.14e-51 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 180.74 E-value: 3.14e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyssDKSQNMVLMGGLRKYVPITRTTFLWGTLS 80
Cdd:PRK06590 315 SQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRKMGGLRKKMPVTYATFLIGTLA 386
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 81 LCGIPPLACFWSKDEILSNSW-LYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNysstkegslysislwgkri 159
Cdd:PRK06590 387 LIGIPPFAGFFSKDEILEAAFaNGHINLFVAGLVGAFLTAFYSFRLIFLVFHGKEKEKIHH------------------- 447
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 160 pkgvnrdfilsttksgvsffsqniskipgntrnrigsfstsfgakntfvyPHETGNTMlfplfILLLFTLFIGSIGIHFd 239
Cdd:PRK06590 448 --------------------------------------------------PHESPAVM-----TLPLIVLAVLSVFAGA- 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 240 ngvidngiaeltILSKWLTPSINFFQESSSSSINSYEFITNAISSVSLAIFGLFIAYIFYGSAYSffqnldfqnslVKGS 319
Cdd:PRK06590 472 ------------LIVPPFLGVLPLTTELAHGEAEHHLPVWVALLPLVVALAGIALAWLLYLKKPT-----------LPTS 528
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 703894280 320 LKNTFSdqvkkKIYSWSYNRGYIDIFYTRVFTLGIRGLTE-LTQFFDKGVIDGITNGV 376
Cdd:PRK06590 529 IAAPGR-----FLYTLLRNKYYFDELYEKVFVKPGLALARlLWKDGDDGIIDGLVPNS 581
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
1-137 |
9.01e-42 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 154.36 E-value: 9.01e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEplvgyssdKSQNMVLMGGLRKYVPITRTTFLWGTLS 80
Cdd:TIGR01974 311 SQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLA 382
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 703894280 81 LCGIPPLACFWSKDEILSNSW--LYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVH 137
Cdd:TIGR01974 383 LIGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHE 441
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
1-116 |
5.81e-28 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 111.25 E-value: 5.81e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSVIHSMEplvgyssdKSQNMVLMGGLRKYVPITRTTFLWG 77
Cdd:pfam00361 181 SHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV--------HTRNIRDYGGLAKTMPILALVFLVA 252
|
90 100 110
....*....|....*....|....*....|....*....
gi 703894280 78 TLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAG 116
Cdd:pfam00361 253 MLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
1-130 |
9.56e-27 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 111.64 E-value: 9.56e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgysSDKsQNMVLMGGLRKYVPITRTTFLWGTLS 80
Cdd:MTH00210 309 SQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV-------SDE-QDMRKMGGLIKSIPFTYVMILIGSLS 380
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 703894280 81 LCGIPPLACFWSKDEILSNSW--LYSPFFGIIASFTAGLTAFYMFRIYLLTF 130
Cdd:MTH00210 381 LMGFPYLTGFYSKDLILELTYdkYYIAFAYWLGSFSALLTAFYSIRLIYLTF 432
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
1-148 |
1.78e-26 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 110.94 E-value: 1.78e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgysSDKsQNMVLMGGLRKYVPITRTTFLWGTLS 80
Cdd:MTH00020 308 SQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHAL-------SDE-QDMRKMGGLISFLPLTYIFFLIGSLS 379
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 81 LCGIPPLACFWSKDEILSNSW--LYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNYSSTKEGS 148
Cdd:MTH00020 380 LMGFPYLTGFYSKDLILELAFgqYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLKKAVFFHLHEGD 449
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-136 |
6.42e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 103.11 E-value: 6.42e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyssDKSQNMVLMGGLRKYVPITRTTFLWGTLS 80
Cdd:MTH00211 302 SQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGL--------NNEQDIRKMGGLSKNLPFTSSCLFLGSLA 373
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 81 LCGIPPLACFWSKDEILSNswLYSPFFGIIASFTA----GLTAFYMFRIYLLTFDGYLRV 136
Cdd:MTH00211 374 LMGFPFLSGFFSKDLILES--MNGSYLNAWALLLTllatSLTAAYSFRLIFLSLGGYPRF 431
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
1-130 |
1.18e-23 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 102.36 E-value: 1.18e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyssDKSQNMVLMGGLRKYVPITRTTFLWGTLS 80
Cdd:MTH00208 334 SQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLA 405
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 703894280 81 LCGIPPLACFWSKDEILSNSwLYSP--FFGIIASFTAGL-TAFYMFRIYLLTF 130
Cdd:MTH00208 406 LMGTPFLAGFYSKDLILEAG-LASIsnLLSIILALIATLlTAVYSFRIIFFCF 457
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-127 |
2.96e-23 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 101.38 E-value: 2.96e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEplvgyssdKSQNMVLMGGLRKYVPITRTTFLWGTLS 80
Cdd:MTH00207 277 SQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLA 348
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 703894280 81 LCGIPPLACFWSKDEILSNSwLYSPFFGIIAS---FTAGLTAFYMFRIYL 127
Cdd:MTH00207 349 LCGSPFLSGFYSKDLILESS-LFYPHNSLMILmifLATALTAAYSTRFTL 397
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
1-137 |
3.95e-23 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 101.01 E-value: 3.95e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyssDKSQNMVLMGGLRKYVPITRTTFLWGTLS 80
Cdd:MTH00004 307 SQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLQKTLPITSSCLTIGNLA 378
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 703894280 81 LCGIPPLACFWSKD---EILSNSWLYSpfFGIIASFTA-GLTAFYMFRIYLLTFDGYLRVH 137
Cdd:MTH00004 379 LMGTPFLSGFYSKDtiiETLNTSYLNA--WALLLTLLAtSFTAAYSLRMILLVQTGFPRTP 437
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-154 |
7.28e-23 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 99.83 E-value: 7.28e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyssDKSQNMVLMGGLRKYVPITRTTFLWGTLS 80
Cdd:MTH00165 277 SQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNM--------SNSQDIRFMGGLSNFMPLTSSCFNISNLS 348
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 703894280 81 LCGIPPLACFWSKD---EILSNSWLySPFFGIIASFTAGLTAFYMFR-IYLLTFDGYLRVHFQNYSSTKEGSLYSISL 154
Cdd:MTH00165 349 LCGFPFLSGFYSKDlilEMVSMSNL-NFFIFFLFFFSTGLTVSYSFRlIYYSMSGDFNLKSLNNLSDESKFMLKSMIL 425
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
1-125 |
2.41e-22 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 98.38 E-value: 2.41e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHsmeplvgySSDKSQNMVLMGGLRKYVPITRTTFLWGTLS 80
Cdd:MTH00151 274 SQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIH--------SSSGTQDIRLLGSLFLSLPLTSGCLNISSLS 345
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 703894280 81 LCGIPPLACFWSKDEILSNSwLYSP---FFGIIASFTAGLTAFYMFRI 125
Cdd:MTH00151 346 LCGAPFLSGFYSKDLILESS-LMSPtslLMVLLMFVGVGLTALYSARL 392
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-126 |
1.47e-21 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 95.21 E-value: 1.47e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQ---AALFHLITHAYSKALLFLGSGSVIHSMeplvgyssdKSQNMVLMGGLRKYVPITRTTFLWG 77
Cdd:COG0651 306 SQIGYILLGLGLGTPLglaGALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIG 376
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 703894280 78 TLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIAS-FTAGLTAFYMFRIY 126
Cdd:COG0651 377 ALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLlLSSLLTLAYFVRIF 426
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
3-132 |
3.23e-21 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 95.36 E-value: 3.23e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 3 LGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIhsmeplvgySSDKSQNMVLMGGLRKYVPITRTTFLWGTLSLC 82
Cdd:PRK07390 320 LGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSII---------LTTITQDLTELGGLWSRMPATTLAFLVGSAGLV 390
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 703894280 83 GIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDG 132
Cdd:PRK07390 391 ALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVFLG 440
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-132 |
1.28e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 93.11 E-value: 1.28e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyssdKSQNMVLMGGLRKYVPITRTTFLWG 77
Cdd:PRK12667 329 SHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAGLGRKMPIASFAFLIG 399
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 703894280 78 TLSLCGIPPLACFWSKdEILSNSWLYS--PFFGIIASFTAGLTAFYMFRIYLLTFDG 132
Cdd:PRK12667 400 ALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-125 |
1.28e-20 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 93.43 E-value: 1.28e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyssDKSQNMVLMGGLRKYVPITRTTFLWGTLS 80
Cdd:MTH00066 305 SQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQKALPITTSCLTIGSLA 376
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 703894280 81 LCGIPPLACFWSKDEILS-------NSWlySPFFGIIA-SFtaglTAFYMFRI 125
Cdd:MTH00066 377 LTGTPFLAGFFSKDAIIEamntsnlNSW--ALILTLIAtSF----TAVYSFRI 423
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
1-130 |
4.00e-20 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 91.63 E-value: 4.00e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEplvgyssdKSQNMVLMGGLRKYVPITRTTFLWGTLS 80
Cdd:MTH00209 273 SQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHG--------HSQDIRMVGNLWYQMPITSICLNIANLS 344
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 703894280 81 LCGIPPLACFWSKDEILsNSWLYSPFFGIIAS---FTAGLTAFYMFRIYLLTF 130
Cdd:MTH00209 345 LCGIPFLAGFYSKDLIL-ESMLESNMPIMTLIlmfLSTSLTAAYSMRLSYFSL 396
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
1-135 |
7.06e-19 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 87.99 E-value: 7.06e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyssDKSQNMVLMGGLRKYVPITRTTFLWGTLS 80
Cdd:MTH00108 308 SQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNL--------NDEQDIRKMGGLFKTLPFTSTALIIGSLA 379
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 703894280 81 LCGIPPLACFWSKDEIL-------SNSWLYSpfFGIIASftaGLTAFYMFRIYLLTFDGYLR 135
Cdd:MTH00108 380 LTGMPFLTGFYSKDLIIeaantsyTNAWALL--ITLIAT---SLTAAYSTRIIFFALLGQPR 436
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
1-125 |
1.18e-18 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 87.58 E-value: 1.18e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyssDKSQNMVLMGGLRKYVPITRTTFLWGTLS 80
Cdd:MTH00137 313 SQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLHHLTPFTSSCLTIGSLA 384
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 703894280 81 LCGIPPLACFWSKDEI---LSNSWL--YSPFFGIIA-SFtaglTAFYMFRI 125
Cdd:MTH00137 385 LTGTPFLAGFFSKDAIieaLNTSHLnaWALTLTLIAtSF----TAVYSLRV 431
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
1-97 |
5.84e-18 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 85.40 E-value: 5.84e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGI-GSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgysSDKSQNMVLMGGLRKYVPITRTTFLWGTL 79
Cdd:MTH00032 323 SQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHST-------TVDEQDMRKMGGLIHSIPFTYTMMLIGSF 395
|
90
....*....|....*...
gi 703894280 80 SLCGIPPLACFWSKDEIL 97
Cdd:MTH00032 396 SIMGLPYLTGFYSKDLIL 413
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-132 |
4.62e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 79.37 E-value: 4.62e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIG---------------SYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyssdKSQNMVLMGGLRK 65
Cdd:PRK08376 321 SQIGYMLLGLGVGlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIYET---------GTRNLNELGGLAR 391
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 703894280 66 YVPITRTTFLWGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDG 132
Cdd:PRK08376 392 TMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
4-132 |
3.95e-15 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 76.85 E-value: 3.95e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 4 GYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEplvgyssdkSQNMVLMGGLRKYVPITRTTFLWGTLSLCG 83
Cdd:PRK06521 327 AYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATG---------TRDMEKLGGLIRRMPWTAWAFLIGCLAISA 397
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 84 IPPLACFWSK----DEILSNSWLYSPFFGIIA-------SFTAGLTAFYMFRIYLLTFDG 132
Cdd:PRK06521 398 LPPLNGFVSEwlllQSLLSSPGLPQWGLKLAVpiaaamlALTAALAAMCFVKFYGITFLG 457
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-125 |
7.86e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 69.52 E-value: 7.86e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSY---QAALFHLITHAYSKALLFLGSGSVihsmeplvgYSSDKSQNMVLMGGLRKYVPITRTTFLWG 77
Cdd:PRK08375 305 SQMGYILLGLALLTPlalAAGLLHLLHHALMKGALFLAAGAI---------EVTYGTRRLSELSGLGRRMPLTAAAFAVA 375
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 703894280 78 TLSLCGIPPLACFWSKDEILS-----NSWLYSPFFgIIASFtagLTAFYMFRI 125
Cdd:PRK08375 376 SLSLIGVPPTSGFVSKWYLVVgaveaGQWLVLAVL-LASSL---LALLYFLRI 424
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
1-93 |
1.67e-12 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 68.48 E-value: 1.67e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyssdKSQNMVLMGGLRKYVPITRTTFLWG 77
Cdd:PRK08668 306 ANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFAAVIYRT---------GTTKISEMGGLIEKMPFTFAMYLVA 376
|
90
....*....|....*.
gi 703894280 78 TLSLCGIPPLACFWSK 93
Cdd:PRK08668 377 IISLAGIPPMSGFASK 392
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
1-110 |
9.32e-11 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 63.07 E-value: 9.32e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSY------QAALFHLITHAYSKALLFLGSGSVIHSMeplvgyssdKSQNMVLMGGLRKYVPITRTTF 74
Cdd:PRK06525 306 TQLGYMFFGLSLAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSC---------GTRLLPRLRGVLKKLPLVGVGF 376
|
90 100 110
....*....|....*....|....*....|....*.
gi 703894280 75 LWGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGII 110
Cdd:PRK06525 377 CVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
1-119 |
1.01e-10 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 62.86 E-value: 1.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyssdKSQNMVLMGGLRKYVPITRTTFLWG 77
Cdd:PRK08377 307 GQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALALTIG 377
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 703894280 78 TLSLCGIPPLACFWSKdeilsnswlyspFFGIIASFTAGLTA 119
Cdd:PRK08377 378 ALSTVGIPLFNVFWSK------------FRIILAGLSAGYTW 407
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
1-98 |
7.22e-09 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 57.21 E-value: 7.22e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQA---ALFHLITHAYSKALLFLGSGSVIHSmeplVGYSsdksqNMVLMGGLRKYVPITRTTFLWG 77
Cdd:PRK12668 274 SQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYR----TGTE-----KLTELGGLYRSMPLTALFCLVG 344
|
90 100
....*....|....*....|.
gi 703894280 78 TLSLCGIPPLACFWSKDEILS 98
Cdd:PRK12668 345 ALSISAFPLFSGFVSKSMIIS 365
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-94 |
8.90e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 57.15 E-value: 8.90e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQ-------AALFHLITHAYSKALLFLGSGSVIHSMeplvgyssdKSQNMVLMGGLRKYVPITRTT 73
Cdd:PRK12649 312 SQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEA---------ATRDIRKLGGLRKEMPITFIV 382
|
90 100
....*....|....*....|.
gi 703894280 74 FLWGTLSLCGIPPLACFWSKD 94
Cdd:PRK12649 383 ASIAALAMAGIPPLNGFLSKE 403
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
1-130 |
1.23e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 56.50 E-value: 1.23e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQA---ALFHLITHAYSKALLFLGSGSVIHsmepLVGYSSDKSqnmvlMGGLRKYVPITRTTFLWG 77
Cdd:PRK12663 306 SSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR----LTGYRSLQY-----LGGLYRKEPLFGALFLIL 376
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 703894280 78 TLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFY-MFRIYLLTF 130
Cdd:PRK12663 377 IFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYsLFRIFFLAY 430
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-117 |
1.46e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 56.47 E-value: 1.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLGSGSVIHSmeplVGySSDKSQnmvlMGGLRKYVPITRTTFLWG 77
Cdd:PRK12647 293 SALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE----TG-TRDITK----LGGLRRAMPITAAAALLA 363
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 703894280 78 TLSLCGIPPLACFWSKDEI---LSNSWLYSPFFGIIASFTAGL 117
Cdd:PRK12647 364 ALSMAGLPPLFGFLAKELIyeaLLEAPLWSLILTVAAVLGNAL 406
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
7-108 |
2.18e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 55.89 E-value: 2.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 7 MLALGigsyqAALFHLITHAYSKALLFLGSGSVIHSMeplvgyssdKSQNMVLMGGLRKYVPITRTTFLWGTLSLCGIPP 86
Cdd:PRK08667 329 LLALG-----GALFHSLNHALFKSLLFLTAGSVVHAT---------GTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPP 394
|
90 100
....*....|....*....|..
gi 703894280 87 LACFWSkdEILsnswLYSPFFG 108
Cdd:PRK08667 395 FNGFAS--ELL----LYESFFQ 410
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
1-156 |
2.27e-08 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 55.82 E-value: 2.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyssdKSQNMVLMGGLRKYVPITRTTFLWG 77
Cdd:PRK12650 306 SQLGWIVATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDHQA---------GTRDIRRLGSLWRRMPFTFVSVTIA 376
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 78 TLSLCGIPPLACFWSKDEILSnSWLYSPF--FGIIA-SFTAGLTAFYMF----RIYLLTF-DGYlrvhfQNYSSTKEGSL 149
Cdd:PRK12650 377 ALSMAAVPPLFGFVSKEGMLT-AFLEAPGgnAGVVLlLVGAALGAVFTFaysaRLVLGAFvDGP-----RDMSHVKEAPV 450
|
....*..
gi 703894280 150 ysiSLWG 156
Cdd:PRK12650 451 ---SLWL 454
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
1-132 |
3.05e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 55.21 E-value: 3.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQA---ALFHLITHAYSKALLFLGSGSVIHSMeplvgyssdKSQNMVLMGGLRKYVPITRTTFLWG 77
Cdd:PRK05846 311 SHMGFVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVLYDRL---------HTRDIADYGGLAKVMPVLAAFFLFF 381
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 703894280 78 TLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDG 132
Cdd:PRK05846 382 AMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFG 436
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-102 |
3.62e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 55.20 E-value: 3.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQ---AALFHLITHAYSKALLFLGSGSVIHSmeplVGyssdkSQNMVLMGGLRKYVPITRTTFLWG 77
Cdd:PRK12648 305 SHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDHE----TG-----TRDMRRLSGLRRLMPITATLAMVA 375
|
90 100
....*....|....*....|....*....
gi 703894280 78 TLSLCGIPPLACFWSK----DEILSNSWL 102
Cdd:PRK12648 376 AAAMAGVPLLNGFLSKemffAETLDTHLL 404
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-133 |
4.22e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 54.95 E-value: 4.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSVIHsmepLVGYSSDKSqnmvlMGGLRKYVPITRTTFLWG 77
Cdd:PRK07691 309 IAVGVILVGVAMMtesGMIGAIYYLIHDMIVKAALFLLIGIMIK----ITGTTDLKK-----MGGLIKRYPVLGWMFFIA 379
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 703894280 78 TLSLCGIPPLACFWSKDEILSNSWLYSPF-FGIIASFTAGLTAFYMFRIYLLTFDGY 133
Cdd:PRK07691 380 ALSLAGIPPLSGFYGKFFIVEGTFEAGFYvSGIIVLLSSLLVLYSVIKIFLKGFWGE 436
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
1-93 |
5.10e-08 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 54.93 E-value: 5.10e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGS----YQ------------AALFHLITHAYSKALLFLGSGSVIHSmeplVGyssdkSQNMVLMGGLR 64
Cdd:PRK12645 308 SQLGLIMSLLGIGAaslhYQgddskiyaaaitAAIFHLINHATFKGSLFMIVGIVDHE----TG-----TRDIRKLGGLM 378
|
90 100
....*....|....*....|....*....
gi 703894280 65 KYVPITRTTFLWGTLSLCGIPPLACFWSK 93
Cdd:PRK12645 379 TIMPITFTIALIGALSMAGLPPFNGFLSK 407
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
1-93 |
1.31e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 53.11 E-value: 1.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSVihsmeplvgYSSDKSQNMVLMGGLRKYVPITRTTFLWG 77
Cdd:PRK06277 300 SQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVAFMVLCA 370
|
90
....*....|....*.
gi 703894280 78 TLSLCGIPPLACFWSK 93
Cdd:PRK06277 371 KLAISGVPPFNGFQSK 386
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-125 |
1.38e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 53.28 E-value: 1.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGI---GSYQAALFHLITHAYSKALLFLGSGSVihsmeplvgYSSDKSQNMVLMGGLRKYVPITRTTFLWG 77
Cdd:PRK06589 314 SQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDKLHGTSKSFPLISFIISIS 384
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 703894280 78 TLSLCGIPPLACFWSKDEIL-----SNSWLYSPFFGIIASFTAGLTAFYMFRI 125
Cdd:PRK06589 385 SLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKI 437
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
1-143 |
1.87e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 52.61 E-value: 1.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSM---EPLVGYSSDKSQNMVLMgglrkyvpitrTTFLWG 77
Cdd:MTH00095 261 SQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNfgqQDGRNYSNNGNLPMFIQ-----------LQLLVT 329
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 703894280 78 TLSLCGIPPLACFWSKDEILSNSWL--YSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNYSS 143
Cdd:MTH00095 330 LFCLCGLMFTSGMVSKELILELFFFnnYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNVYSSS 397
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
1-94 |
4.66e-07 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 51.68 E-value: 4.66e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIG-----------------SYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyssdKSQNMVLMGGL 63
Cdd:PRK12646 308 SQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHEA---------GTRDIRILSGM 378
|
90 100 110
....*....|....*....|....*....|.
gi 703894280 64 RKYVPITRTTFLWGTLSLCGIPPLACFWSKD 94
Cdd:PRK12646 379 RQLFPKMNLVMTIAALSMAGVPFLNGFLSKE 409
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
4-115 |
5.09e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 51.47 E-value: 5.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 4 GYMMLALGIGS---YQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyssdKSQNMVLMGGLRKYVPITRTTFLWGTLS 80
Cdd:PRK06458 318 GLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKY---------GTRDINVIRGLLKVSPLTGWGLMLGALA 388
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 703894280 81 LCGIPPLACFWSKDEILSNS-----WLYSPFF--GIIASFTA 115
Cdd:PRK06458 389 IAGMPPFGVFISEFLILTAGlargpLLIAILLllLLTLAFAA 430
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
7-135 |
5.95e-06 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 48.28 E-value: 5.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 7 MLALGigsYQAALFHLITHAYSKALLFLGSGSVIHSmeplVGYssdksQNMVLMGGLRKYVPITRTTFLWGTLSLCGIPP 86
Cdd:PRK08042 302 LIALG---LVGGLYHLLNHSLFKSVLFLGAGSVWFR----TGH-----RDIEKLGGIGKKMPVISIAMLVGLMAMAALPP 369
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 87 LACFWSKDEI------LSNSWLY-----SPFFGIIASFTAGLTAFYMFRIYLLTFDGYLR 135
Cdd:PRK08042 370 LNGFAGEWVIyqsffkLSNSGAFvarllGPLLAVGLAITGALAVMCMAKVYGVTFLGAPR 429
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
1-40 |
1.36e-05 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 47.00 E-value: 1.36e-05
10 20 30 40
....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVI 40
Cdd:PRK08168 297 AQMGFMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
1-63 |
3.98e-05 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 45.41 E-value: 3.98e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 703894280 1 SQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEPLVGYSSDKSQNMVLMGGL 63
Cdd:PRK08601 300 AQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFNIVKQANEKKSYLWIVVGRV 362
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-130 |
4.03e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 45.34 E-value: 4.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQ---AALFHLITHAYSKALLFLGSGSVihsmEPLVGYSSdksqnMVLMGGLRKYVPITRTTFLWG 77
Cdd:PRK12665 307 SHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVGLI----ERQAGSSS-----LRRLGGLAKASPLLAVLFFVP 377
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 703894280 78 TLSLCGIPPLACFWSKDEIL-----SNSWLysPFFGIIAS-FTAGLTAFYMFRIYLLTF 130
Cdd:PRK12665 378 ALNLGGIPPFSGFIGKVALLeagaeDGTWL--AWALVAGGvVTSLLTLYAVARVWTKAF 434
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-125 |
4.64e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 45.11 E-value: 4.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQ---AALFHLITHAYSKALLFLGSGSVIHsmeplvGYSSDKSQNMVlmgGLRKYVPITRTTFLWG 77
Cdd:PRK12662 313 SHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISY------HFGTTKLEDCL---NLWKSMPKITLAFVLL 383
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 703894280 78 TLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIA-SFTAGLTAFYMFRI 125
Cdd:PRK12662 384 SLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVlLVGSGLSVIYVWKI 432
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-93 |
5.96e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 45.30 E-value: 5.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGSYQAALFHL---ITHAYSKALLFLGSGSVIHSmeplVGyssdkSQNMVLMGGLRKYVPITRTTFLWG 77
Cdd:PRK12644 301 SQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS----TG-----TRDIRKLSGLGRRQPVLAVVAALA 371
|
90
....*....|....*.
gi 703894280 78 TLSLCGIPPLACFWSK 93
Cdd:PRK12644 372 AASMAGLPPLLGFVAK 387
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
1-125 |
1.21e-04 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 43.95 E-value: 1.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLgsgsVIHSMEplvgYSSDKSQNMVLMGGLRKYVPITRTTFLWG 77
Cdd:COG1007 303 AHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VILLLS----RKGGEAEEIEDLAGLARRSPLLALAMTIF 374
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 703894280 78 TLSLCGIPPLACFWSKDEILSNSW---LYspFFGIIASFTAGLTAFYMFRI 125
Cdd:COG1007 375 LLSLAGIPPTAGFFGKFYVFSAAVeagLY--WLAVIAVLNSVISAYYYLRV 423
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-113 |
2.78e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 42.63 E-value: 2.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGsyqaALFHLiTHAYSKALLFLGSGSVihsmeplvgYSSDKSQNMVLMGGLRKYVPITRTTFlwgtlS 80
Cdd:PRK07234 279 SQLGFILAAPLVG----GLYAL-AHGLVKSTLFLCAGAL---------PSRNFTELISQMLGIGKWIPLTMASF-----S 339
|
90 100 110
....*....|....*....|....*....|....*....
gi 703894280 81 LCGIPPLACFWSKDEILSN--SW----LYSPFFGIIASF 113
Cdd:PRK07234 340 IAGFPLLAGFVSKVLTLKNllPWqaiaLNLAAVGTAASF 378
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-153 |
3.81e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 42.12 E-value: 3.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLALGIGS---YQAALFHLITHAYSKallfLGSGSVIHSMEPLVGYSSDKSQnmvlMGGLRKYVPITRTTFLWG 77
Cdd:PRK05777 304 AHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGEAESISD----FAGLSKRSPLLAAVMTIF 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 78 TLSLCGIPPLACFWSKDEILSNS------WLyspffGIIASFTAGLTAFYMFR-IYLLTFDGYLRVHFQNYSSTKEGSLY 150
Cdd:PRK05777 376 MLSLAGIPPTAGFWGKFYVFEAAveaglwWL-----AVIGVLNSAIGAFYYLRvIKLMYFDEPPRDAPVNWPLSAGGAVL 450
|
...
gi 703894280 151 SIS 153
Cdd:PRK05777 451 SVS 453
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
1-129 |
1.25e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 40.79 E-value: 1.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 703894280 1 SQLGYMMLalGIGSYQA-----ALFHLITHAYSKALLFLGSGsvihsmeplVGYSSDKSQNMVLMGGLRKYVPITRTTFL 75
Cdd:PRK12561 285 SHMGFVLL--GIAAFTDlgisgAMLQMISHGLIAAALFFLTG---------VTYERTHTLSIPNMGGLAKVMPKTFALFT 353
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 703894280 76 WGTLSLCGIPPLACFWSKDEI---LSNSWLYSPFFGIIASFTAG----LTAfymfrIYLLT 129
Cdd:PRK12561 354 ASSMASLALPGMSGFVSELTVflgITSSDVYSSTFRTITILLAAvgliLTP-----IYLLS 409
|
|
| |
