|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-360 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 738.00 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 1 IANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFI 80
Cdd:MTH00131 13 IANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 81 CIYLHIGRGLYYGSYLYKETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDN 160
Cdd:MTH00131 93 CIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDN 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 161 ATLTRFFAFHFLFPFVIVAMTLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALISLALFSPNLLGD 240
Cdd:MTH00131 173 ATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGD 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 241 PDNFTPANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMLVPILHTSKQRSLTFRPFTQFLFWLLIADV 320
Cdd:MTH00131 253 PDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADV 332
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 700676223 321 MILTWIGGMPVEHPFIIIGQIASLLYFSLFLVLVPTVGWL 360
Cdd:MTH00131 333 LILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWL 372
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
10-360 |
3.95e-121 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 354.87 E-value: 3.95e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 10 PAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLHIGRG 89
Cdd:COG1290 31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 90 LYYGSylYKE----TWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDNATLTR 165
Cdd:COG1290 111 FFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNR 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 166 FFAF-HFLFPFVIVAMTLVHLIFLHETGSNNPTG----LNSDADKISFHPYFSYKDLLGFAALLIALISLALFSPNllGD 240
Cdd:COG1290 189 FFALhVLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NP 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 241 PDNFTPANPMVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLASILVLMLVPILHTSKQRSLTFRPFTQFLFWLLIA 318
Cdd:COG1290 267 PPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIV 346
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 700676223 319 DVMILTWIGGMPVehPFIIIGQIASLLYFSLFLVLVPTVGWL 360
Cdd:COG1290 347 FFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFI 386
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
3-194 |
8.10e-85 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 255.37 E-value: 8.10e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 3 NDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICI 82
Cdd:cd00284 7 NNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLML 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 83 YLHIGRGLYYGSY--LYKETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDN 160
Cdd:cd00284 87 YLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDN 166
|
170 180 190
....*....|....*....|....*....|....
gi 700676223 161 ATLTRFFAFHFLFPFVIVAMTLVHLIFLHETGSN 194
Cdd:cd00284 167 ATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
6-192 |
2.28e-78 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 238.44 E-value: 2.28e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 6 LVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLH 85
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 86 IGRGLYYG--SYLYKETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDNATL 163
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 700676223 164 TRFFAFHFLFPFVIVAMTLVHLIFLHETG 192
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
246-318 |
5.77e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 57.50 E-value: 5.77e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 700676223 246 PANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMLVPILHTSKQRSLTFR---PFTQFLFWLLIA 318
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFRrpvATTVFLFGTVVA 140
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-360 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 738.00 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 1 IANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFI 80
Cdd:MTH00131 13 IANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 81 CIYLHIGRGLYYGSYLYKETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDN 160
Cdd:MTH00131 93 CIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDN 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 161 ATLTRFFAFHFLFPFVIVAMTLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALISLALFSPNLLGD 240
Cdd:MTH00131 173 ATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGD 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 241 PDNFTPANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMLVPILHTSKQRSLTFRPFTQFLFWLLIADV 320
Cdd:MTH00131 253 PDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADV 332
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 700676223 321 MILTWIGGMPVEHPFIIIGQIASLLYFSLFLVLVPTVGWL 360
Cdd:MTH00131 333 LILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWL 372
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-360 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 670.84 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 1 IANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFI 80
Cdd:MTH00119 14 IINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFI 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 81 CIYLHIGRGLYYGSYLYKETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDN 160
Cdd:MTH00119 94 CIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDN 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 161 ATLTRFFAFHFLFPFVIVAMTLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALISLALFSPNLLGD 240
Cdd:MTH00119 174 PTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGD 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 241 PDNFTPANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMLVPILHTSKQRSLTFRPFTQFLFWLLIADV 320
Cdd:MTH00119 254 PENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANL 333
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 700676223 321 MILTWIGGMPVEHPFIIIGQIASLLYFSLFLVLVPTVGWL 360
Cdd:MTH00119 334 LILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGAL 373
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-360 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 654.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 1 IANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFI 80
Cdd:MTH00074 14 IINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFI 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 81 CIYLHIGRGLYYGSYLYKETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDN 160
Cdd:MTH00074 94 CIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDK 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 161 ATLTRFFAFHFLFPFVIVAMTLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALISLALFSPNLLGD 240
Cdd:MTH00074 174 ATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGD 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 241 PDNFTPANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMLVPILHTSKQRSLTFRPFTQFLFWLLIADV 320
Cdd:MTH00074 254 PDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANT 333
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 700676223 321 MILTWIGGMPVEHPFIIIGQIASLLYFSLFLVLVPTVGWL 360
Cdd:MTH00074 334 LILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWL 373
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-358 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 646.70 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 1 IANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFI 80
Cdd:MTH00100 13 IINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 81 CIYLHIGRGLYYGSYLYKETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDN 160
Cdd:MTH00100 93 CLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDK 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 161 ATLTRFFAFHFLFPFVIVAMTLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALISLALFSPNLLGD 240
Cdd:MTH00100 173 ATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGD 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 241 PDNFTPANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMLVPILHTSKQRSLTFRPFTQFLFWLLIADV 320
Cdd:MTH00100 253 PDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADL 332
|
330 340 350
....*....|....*....|....*....|....*...
gi 700676223 321 MILTWIGGMPVEHPFIIIGQIASLLYFSLFLVLVPTVG 358
Cdd:MTH00100 333 LTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIAS 370
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-355 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 631.95 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 1 IANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFI 80
Cdd:MTH00191 10 IVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 81 CIYLHIGRGLYYGSYLYKETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDN 160
Cdd:MTH00191 90 CIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDN 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 161 ATLTRFFAFHFLFPFVIVAMTLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALISLALFSPNLLGD 240
Cdd:MTH00191 170 ATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGD 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 241 PDNFTPANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMLVPILHTSKQRSLTFRPFTQFLFWLLIADV 320
Cdd:MTH00191 250 PENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANF 329
|
330 340 350
....*....|....*....|....*....|....*
gi 700676223 321 MILTWIGGMPVEHPFIIIGQIASLLYFSLFLVLVP 355
Cdd:MTH00191 330 ILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFP 364
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-353 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 608.71 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 1 IANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFI 80
Cdd:MTH00156 3 IINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 81 CIYLHIGRGLYYGSYLYKETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDN 160
Cdd:MTH00156 83 CIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDN 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 161 ATLTRFFAFHFLFPFVIVAMTLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALISLALFSPNLLGD 240
Cdd:MTH00156 163 ATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGD 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 241 PDNFTPANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMLVPILHTSKQRSLTFRPFTQFLFWLLIADV 320
Cdd:MTH00156 243 PENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIV 322
|
330 340 350
....*....|....*....|....*....|...
gi 700676223 321 MILTWIGGMPVEHPFIIIGQIASLLYFSLFLVL 353
Cdd:MTH00156 323 ILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-360 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 581.66 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 1 IANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFI 80
Cdd:MTH00034 13 ILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 81 CIYLHIGRGLYYGSYLYKETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDN 160
Cdd:MTH00034 93 CLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDN 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 161 ATLTRFFAFHFLFPFVIVAMTLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALISLALFSPNLLGD 240
Cdd:MTH00034 173 ATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALND 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 241 PDNFTPANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMLVPILHTSKQRSLTFRPFTQFLFWLLIADV 320
Cdd:MTH00034 253 PENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATF 332
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 700676223 321 MILTWIGGMPVEHPFIIIGQIASLLYFSLFLVLVPTVGWL 360
Cdd:MTH00034 333 FILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYL 372
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-353 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 576.86 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 1 IANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFI 80
Cdd:MTH00145 14 VVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFI 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 81 CIYLHIGRGLYYGSYLYKETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDN 160
Cdd:MTH00145 94 CIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGN 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 161 ATLTRFFAFHFLFPFVIVAMTLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALISLALFSPNLLGD 240
Cdd:MTH00145 174 ATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGD 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 241 PDNFTPANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMLVPILHTSKQRSLTFRPFTQFLFWLLIADV 320
Cdd:MTH00145 254 PENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNF 333
|
330 340 350
....*....|....*....|....*....|...
gi 700676223 321 MILTWIGGMPVEHPFIIIGQIASLLYFSLFLVL 353
Cdd:MTH00145 334 FILTWIGACPVEEPYETIGQVFTVLYFLFFLIL 366
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-353 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 536.95 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 1 IANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFI 80
Cdd:MTH00016 14 IMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFI 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 81 CIYLHIGRGLYYGSYLYKETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDN 160
Cdd:MTH00016 94 CLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDN 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 161 ATLTRFFAFHFLFPFVIVAMTLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALISLALFSPNLLGD 240
Cdd:MTH00016 174 ATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGD 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 241 PDNFTPANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMLVPILHTSKQRSLTFRPFTQFLFWLLIADV 320
Cdd:MTH00016 254 PENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNF 333
|
330 340 350
....*....|....*....|....*....|...
gi 700676223 321 MILTWIGGMPVEHPFIIIGQIASLLYFSLFLVL 353
Cdd:MTH00016 334 LLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMIN 366
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-360 |
7.58e-180 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 503.46 E-value: 7.58e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 1 IANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFI 80
Cdd:MTH00022 12 IVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 81 CIYLHIGRGLYYGSYLYKETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDN 160
Cdd:MTH00022 92 CLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 161 ATLTRFFAFHFLFPFVIVAMTLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALISLALFSPNLLGD 240
Cdd:MTH00022 172 ATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGD 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 241 PDNFTPANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMLVPILHTSKQRSLTFRPFTQFLFWLLIADV 320
Cdd:MTH00022 252 PENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDF 331
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 700676223 321 MILTWIGGMPVEHPFIIIGQIASLLYFSLFLVLVPTVGWL 360
Cdd:MTH00022 332 ILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGEL 371
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-360 |
8.31e-174 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 488.06 E-value: 8.31e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 1 IANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFI 80
Cdd:MTH00053 14 LVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 81 CIYLHIGRGLYYGSYLYKETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDN 160
Cdd:MTH00053 94 CVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSN 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 161 ATLTRFFAFHFLFPFVIVAMTLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALISLALFSPNLLGD 240
Cdd:MTH00053 174 ATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGD 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 241 PDNFTPANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMLVPILHTSKQRSLTFRPFTQFLFWLLIADV 320
Cdd:MTH00053 254 AENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDF 333
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 700676223 321 MILTWIGGMPVEHPFIIIGQIASLLYFSLFLVLVPTVGWL 360
Cdd:MTH00053 334 FLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYL 373
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-352 |
1.95e-171 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 482.11 E-value: 1.95e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 1 IANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFI 80
Cdd:MTH00224 14 ILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 81 CIYLHIGRGLYYGSYLYKETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDN 160
Cdd:MTH00224 94 FIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDN 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 161 ATLTRFFAFHFLFPFVIVAMTLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALISLALFSPNLLGD 240
Cdd:MTH00224 174 ATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTD 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 241 PDNFTPANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMLVPILHTSKQRSLTFRPFTQFLFWLLIADV 320
Cdd:MTH00224 254 PENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSW 333
|
330 340 350
....*....|....*....|....*....|..
gi 700676223 321 MILTWIGGMPVEHPFIIIGQIASLLYFSLFLV 352
Cdd:MTH00224 334 AILTWIGGRPVEDPFEGIGQVFTILYFSYFII 365
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
4-360 |
1.08e-138 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 399.31 E-value: 1.08e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 4 DALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIY 83
Cdd:MTH00033 13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 84 LHIGRGLYYGSYLYKETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDNATL 163
Cdd:MTH00033 93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 164 TRFFAFHFLFPFVIVAMTLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALISLALFS--PNLLGDP 241
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriETLLQDP 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 242 DNFTPANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMLVPILHTSKQRSLTFRPFTQFLFWLLIADVM 321
Cdd:MTH00033 253 ENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFI 332
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 700676223 322 ILTWIGGMPV-EHPFIIIGQIASLLYFSLFLVLVPTVGWL 360
Cdd:MTH00033 333 ILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYL 372
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
3-353 |
1.19e-121 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 355.02 E-value: 1.19e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 3 NDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICI 82
Cdd:MTH00086 4 NSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 83 YLHIGRGLYYGSYLYKETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDNAT 162
Cdd:MTH00086 84 YLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSAT 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 163 LTRFFAFHFLFPFVIVAMTLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFaALLIALISLALFSPNLLGDPD 242
Cdd:MTH00086 164 LKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNI-IFWLVFIIFSLFYPFNLGDPE 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 243 NFTPANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMLVPILHTSKQrslTFRPFTQFLFWLLIADVMI 322
Cdd:MTH00086 243 MFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNYTS---CLNKLNKFLVFSFIVVNVI 319
|
330 340 350
....*....|....*....|....*....|.
gi 700676223 323 LTWIGGMPVEHPFIIIGQIASLLYFSLFLVL 353
Cdd:MTH00086 320 LSWLGQCLVEYPFLFLSQIFSFIYFFLILLM 350
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
10-360 |
3.95e-121 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 354.87 E-value: 3.95e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 10 PAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLHIGRG 89
Cdd:COG1290 31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 90 LYYGSylYKE----TWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDNATLTR 165
Cdd:COG1290 111 FFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNR 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 166 FFAF-HFLFPFVIVAMTLVHLIFLHETGSNNPTG----LNSDADKISFHPYFSYKDLLGFAALLIALISLALFSPNllGD 240
Cdd:COG1290 189 FFALhVLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NP 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 241 PDNFTPANPMVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLASILVLMLVPILHTSKQRSLTFRPFTQFLFWLLIA 318
Cdd:COG1290 267 PPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIV 346
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 700676223 319 DVMILTWIGGMPVehPFIIIGQIASLLYFSLFLVLVPTVGWL 360
Cdd:COG1290 347 FFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFI 386
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
6-352 |
1.00e-87 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 268.39 E-value: 1.00e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 6 LVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLH 85
Cdd:MTH00046 9 LIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIH 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 86 IGRGLYYGSYLYKETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDNATLTR 165
Cdd:MTH00046 89 MGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 166 FFAFHFLFPFVIVAMTLVHLIFLHETGSNNPTGL-NSDADKISFHPYFSYKDLLGFAALLIALISLALFSPNLLGDPDNF 244
Cdd:MTH00046 169 VFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAY 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 245 TPANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGvLALLASILVLMLVPilhtSKQRSLTFRPFTQFLFWLLIADVMILT 324
Cdd:MTH00046 249 LEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVP----TFNGSSVYSVWRQVNFWLIVSLFFSLS 323
|
330 340
....*....|....*....|....*...
gi 700676223 325 WIGGMPVEHPFIIIGQIASLLYFSLFLV 352
Cdd:MTH00046 324 YLGGCHPEYPYLLISQLFSVLMVLLLFI 351
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
3-194 |
8.10e-85 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 255.37 E-value: 8.10e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 3 NDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICI 82
Cdd:cd00284 7 NNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLML 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 83 YLHIGRGLYYGSY--LYKETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDN 160
Cdd:cd00284 87 YLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDN 166
|
170 180 190
....*....|....*....|....*....|....
gi 700676223 161 ATLTRFFAFHFLFPFVIVAMTLVHLIFLHETGSN 194
Cdd:cd00284 167 ATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
6-192 |
2.28e-78 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 238.44 E-value: 2.28e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 6 LVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLH 85
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 86 IGRGLYYG--SYLYKETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDNATL 163
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 700676223 164 TRFFAFHFLFPFVIVAMTLVHLIFLHETG 192
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
195-342 |
2.88e-53 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 172.83 E-value: 2.88e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 195 NPTGLNSDADKISFHPYFSYKDLLGFAALLIALISLALFSPNLLGDPDNFTPANPMVTPPHIKPEWYFLFAYAILRSIPN 274
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 700676223 275 KLGGVLALLASILVLMLVPILHTSKQRSlTFRPFTQFLFWLLIADVMILTWIGGMPVEHPFIIIGQIA 342
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
246-346 |
7.10e-49 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 159.57 E-value: 7.10e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 246 PANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMLVPILHTSKQRSLTFRPFTQFLFWLLIADVMILTW 325
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 700676223 326 IGGMPVEHPFIIIGQIASLLY 346
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
76-241 |
5.35e-40 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 138.91 E-value: 5.35e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 76 SFFFICIYLHIGRGLYYGSYLYKE--TWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIW 153
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 154 GGFSVDNATLTRFFAF-HFLFPFVIVAMTLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALISLAL 232
Cdd:pfam13631 81 GGPFPGTATIPRFYALhILLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 700676223 233 FSPNLLGDP 241
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
10-196 |
1.83e-32 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 120.97 E-value: 1.83e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 10 PAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLHIGRG 89
Cdd:PRK03735 33 PAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 90 LYYGSYLYKE--TWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDNATLTRFF 167
Cdd:PRK03735 113 FFTGGYKKPRelNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFF 192
|
170 180 190
....*....|....*....|....*....|
gi 700676223 168 AFHFLFP-FVIVAMTLVHLIFLHETGSNNP 196
Cdd:PRK03735 193 AIHVFFLpWALAVLMLAHFLMIRKQGISGP 222
|
|
| petB |
CHL00070 |
cytochrome b6 |
12-196 |
7.24e-27 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 105.96 E-value: 7.24e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 12 PANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLHIGRGLY 91
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700676223 92 YGSYLYKE--TWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSSLVQWIWGGFSVDNATLTRFFAF 169
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*...
gi 700676223 170 HFLFPFVIVAM-TLVHLIFLHETGSNNP 196
Cdd:CHL00070 187 HTFVLPLLTAVfMLMHFLMIRKQGISGP 214
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
246-295 |
6.21e-11 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 60.19 E-value: 6.21e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 700676223 246 PANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMLVPIL 295
Cdd:COG5679 66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFI 115
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
246-318 |
5.77e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 57.50 E-value: 5.77e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 700676223 246 PANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMLVPILHTSKQRSLTFR---PFTQFLFWLLIA 318
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFRrpvATTVFLFGTVVA 140
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
246-318 |
6.41e-10 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 57.32 E-value: 6.41e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 700676223 246 PANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMLVPILHTSKQRSLTFR---PFTQFLFWLLIA 318
Cdd:CHL00058 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENVNKFQNPFRrpvATTVFLIGTAVA 140
|
|
| |
