NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|698349458|gb|AIT94923|]
View 

subunit VIII of photosystem I (chloroplast) [Paradoxia multiseta]

Protein Classification

photosystem I reaction center subunit VIII( domain architecture ID 10000150)

photosystem I reaction center subunit VIII may help in the organization of the PsaL subunit

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
psaI CHL00186
photosystem I subunit VIII; Validated
 27-62 2.38e-15

photosystem I subunit VIII; Validated


:

Pssm-ID: 177088  Cd Length: 36  Bit Score: 61.91  E-value: 2.38e-15
                        10        20        30
                ....*....|....*....|....*....|....*.
gi 698349458 27 MAAAYLPSVLVPLVGLVFPAIAMASLFLYIEKEEIA 62
Cdd:CHL00186  1 MTASNLPSILVPLVGLVFPAIAMASLFLYIQKDKIV 36
 
Name Accession Description Interval E-value
psaI CHL00186
photosystem I subunit VIII; Validated
 27-62 2.38e-15

photosystem I subunit VIII; Validated


Pssm-ID: 177088  Cd Length: 36  Bit Score: 61.91  E-value: 2.38e-15
                        10        20        30
                ....*....|....*....|....*....|....*.
gi 698349458 27 MAAAYLPSVLVPLVGLVFPAIAMASLFLYIEKEEIA 62
Cdd:CHL00186  1 MTASNLPSILVPLVGLVFPAIAMASLFLYIQKDKIV 36
PS_I_psaI TIGR03052
photosystem I reaction center subunit VIII; Members of this protein family are PsaI, subunit ...
 30-60 3.81e-09

photosystem I reaction center subunit VIII; Members of this protein family are PsaI, subunit VIII of the photosystem I reaction center. This protein is found in both the Cyanobacteria and the chloroplasts of plants, but is absent from non-oxygenic photosynthetic bacteria such as Rhodobacter sphaeroides. Species that contain photosystem I also contain photosystem II, which splits water and releases molecular oxygen. [Energy metabolism, Photosynthesis]


Pssm-ID: 132096  Cd Length: 31  Bit Score: 46.18  E-value: 3.81e-09
                         10        20        30
                 ....*....|....*....|....*....|.
gi 698349458  30 AYLPSVLVPLVGLVFPAIAMASLFLYIEKEE 60
Cdd:TIGR03052  1 AWLPSIFVPLVGLVFPAVFMALLFRYIEADD 31
PsaI COG5707
Photosystem I reaction center subunit VIII, PsaI [Energy production and conversion]; ...
 28-59 5.47e-09

Photosystem I reaction center subunit VIII, PsaI [Energy production and conversion]; Photosystem I reaction center subunit VIII, PsaI is part of the Pathway/BioSystem: Photosystem I


Pssm-ID: 444417  Cd Length: 38  Bit Score: 46.12  E-value: 5.47e-09
                        10        20        30
                ....*....|....*....|....*....|..
gi 698349458 28 AAAYLPSVLVPLVGLVFPAIAMASLFLYIEKE 59
Cdd:COG5707   6 AASFLPWIFVPLVGWVLPAVVMGLLFIYIESE 37
PSI_8 pfam00796
Photosystem I reaction centre subunit VIII;
33-56 6.68e-07

Photosystem I reaction centre subunit VIII;


Pssm-ID: 425874  Cd Length: 24  Bit Score: 40.61  E-value: 6.68e-07
                         10        20
                 ....*....|....*....|....
gi 698349458  33 PSVLVPLVGLVFPAIAMASLFLYI 56
Cdd:pfam00796  1 PSIFVPLVGLVFPAVAMALLFLYI 24
 
Name Accession Description Interval E-value
psaI CHL00186
photosystem I subunit VIII; Validated
 27-62 2.38e-15

photosystem I subunit VIII; Validated


Pssm-ID: 177088  Cd Length: 36  Bit Score: 61.91  E-value: 2.38e-15
                        10        20        30
                ....*....|....*....|....*....|....*.
gi 698349458 27 MAAAYLPSVLVPLVGLVFPAIAMASLFLYIEKEEIA 62
Cdd:CHL00186  1 MTASNLPSILVPLVGLVFPAIAMASLFLYIQKDKIV 36
PS_I_psaI TIGR03052
photosystem I reaction center subunit VIII; Members of this protein family are PsaI, subunit ...
 30-60 3.81e-09

photosystem I reaction center subunit VIII; Members of this protein family are PsaI, subunit VIII of the photosystem I reaction center. This protein is found in both the Cyanobacteria and the chloroplasts of plants, but is absent from non-oxygenic photosynthetic bacteria such as Rhodobacter sphaeroides. Species that contain photosystem I also contain photosystem II, which splits water and releases molecular oxygen. [Energy metabolism, Photosynthesis]


Pssm-ID: 132096  Cd Length: 31  Bit Score: 46.18  E-value: 3.81e-09
                         10        20        30
                 ....*....|....*....|....*....|.
gi 698349458  30 AYLPSVLVPLVGLVFPAIAMASLFLYIEKEE 60
Cdd:TIGR03052  1 AWLPSIFVPLVGLVFPAVFMALLFRYIEADD 31
PsaI COG5707
Photosystem I reaction center subunit VIII, PsaI [Energy production and conversion]; ...
 28-59 5.47e-09

Photosystem I reaction center subunit VIII, PsaI [Energy production and conversion]; Photosystem I reaction center subunit VIII, PsaI is part of the Pathway/BioSystem: Photosystem I


Pssm-ID: 444417  Cd Length: 38  Bit Score: 46.12  E-value: 5.47e-09
                        10        20        30
                ....*....|....*....|....*....|..
gi 698349458 28 AAAYLPSVLVPLVGLVFPAIAMASLFLYIEKE 59
Cdd:COG5707   6 AASFLPWIFVPLVGWVLPAVVMGLLFIYIESE 37
psaI PRK11877
photosystem I reaction center subunit VIII; Reviewed
 28-60 1.88e-08

photosystem I reaction center subunit VIII; Reviewed


Pssm-ID: 183355  Cd Length: 38  Bit Score: 44.67  E-value: 1.88e-08
                        10        20        30
                ....*....|....*....|....*....|...
gi 698349458 28 AAAYLPSVLVPLVGLVFPAIAMASLFLYIEKEE 60
Cdd:PRK11877  6 AASWLPWIFVPLVGWVFPAVFMVLLGRYITATA 38
PSI_8 pfam00796
Photosystem I reaction centre subunit VIII;
33-56 6.68e-07

Photosystem I reaction centre subunit VIII;


Pssm-ID: 425874  Cd Length: 24  Bit Score: 40.61  E-value: 6.68e-07
                         10        20
                 ....*....|....*....|....
gi 698349458  33 PSVLVPLVGLVFPAIAMASLFLYI 56
Cdd:pfam00796  1 PSIFVPLVGLVFPAVAMALLFLYI 24
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH