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ABC transporter permease [Flavobacterium psychrophilum]
Protein Classification
ABC transporter permease ( domain architecture ID 13386660 )
ABC transporter permease is the transmembrane subunit found in a periplasmic binding protein (PBP)-dependent ABC transport system, which may be involved in the transport of one or more from a variety of substrates including sugars, ions, amino acids, and peptides, among others
List of domain hits
Name
Accession
Description
Interval
E-value
YadH
COG0842 ABC-type multidrug transport system, permease component [Defense mechanisms];
183-380
2.33e-30
ABC-type multidrug transport system, permease component [Defense mechanisms];
Pssm-ID: 440604 [Multi-domain]
Cd Length: 200
Bit Score: 115.30
E-value: 2.33e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 183 YL Y F ML PG V L LTVFQQVL L LGL ALS FSS E F E NN T FKD L VKKMSNPFGLIFV KV IP YLL MSMGILW L YYGFSVY - YRL PL H 261
Cdd:COG0842 1 YL A F LV PG L L AMSLLFTA L MLT ALS IAR E R E QG T LER L LVTPVSRLEILLG KV LA YLL RGLLQAL L VLLVALL f FGV PL R 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 262 T - DWFPFASATF LF VFSVCCI G I L G S I L LPN Q LK A TEVLMV V AT P SFI LSG FTW P LSQM P V W V Q N IA NAI PLT HYLKIY R 340
Cdd:COG0842 81 G l SLLLLLLVLL LF ALAFSGL G L L I S T L ARS Q EQ A SAISNL V IL P LTF LSG AFF P IESL P G W L Q A IA YLN PLT YFVEAL R 160
170 180 190 200
....*....|....*....|....*....|....*....|
gi 666885825 341 I LF VEKGDFTKIVNP L WAM L IIGM V CFS LA TVFLHLKI R K 380
Cdd:COG0842 161 A LF LGGAGLADVWPS L LVL L AFAV V LLA LA LRLFRRRL R G 200
YhgE super family
cl34288 Uncharacterized membrane protein YhgE, phage infection protein (PIP) family [Function unknown]; ...
8-224
5.79e-07
Uncharacterized membrane protein YhgE, phage infection protein (PIP) family [Function unknown];
COG1511 :Pssm-ID: 441120
Cd Length: 225
Bit Score: 49.94
E-value: 5.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 8 IA RE F K LF F G NK ILRMLF I GA --- P VM Y GF L VGS ---- V Y ek G KVT NLP IV VV D ED QS A -------- MSQK L IQMFSE N E 72
Cdd:COG1511 1 FK RE L K RL F K NK LALIAL I AL ilv P LL Y AG L YLW afwd P Y -- G NLD NLP VA VV N ED KG A tvdgktvn LGDE L VDELKD N D 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 73 VLKIVN V lnntnq S RTV A L K R ------ D A pc V V VIP R DF ESQIL ----- QKHYPELVVFVDAS N tlta N FAS S N I nlcva 141
Cdd:COG1511 79 SFDWQF V ------ S EEE A E K G lkdgky Y A -- V I VIP E DF SANLA sllsd DPEKATITYYTNEA N ---- N YLA S K I ----- 141
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 142 T LK A GIQI eglk KQGLSQKIA ET QY E --- P FKTTFIKE N i RSG NY LYFML P GV L - L TVFQQV LLL G L A L SFSSEFENNTF 217
Cdd:COG1511 142 T DT A ATTV ---- VDQVNSQVT ET YA E tvs P VALKTEAL N - PVP NY GSGLA P FF L s L ALWVGA LLL F L L L RPLVDRAGASL 216
....*..
gi 666885825 218 KD L VKKM 224
Cdd:COG1511 217 DR L NELF 223
Name
Accession
Description
Interval
E-value
YadH
COG0842 ABC-type multidrug transport system, permease component [Defense mechanisms];
183-380
2.33e-30
ABC-type multidrug transport system, permease component [Defense mechanisms];
Pssm-ID: 440604 [Multi-domain]
Cd Length: 200
Bit Score: 115.30
E-value: 2.33e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 183 YL Y F ML PG V L LTVFQQVL L LGL ALS FSS E F E NN T FKD L VKKMSNPFGLIFV KV IP YLL MSMGILW L YYGFSVY - YRL PL H 261
Cdd:COG0842 1 YL A F LV PG L L AMSLLFTA L MLT ALS IAR E R E QG T LER L LVTPVSRLEILLG KV LA YLL RGLLQAL L VLLVALL f FGV PL R 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 262 T - DWFPFASATF LF VFSVCCI G I L G S I L LPN Q LK A TEVLMV V AT P SFI LSG FTW P LSQM P V W V Q N IA NAI PLT HYLKIY R 340
Cdd:COG0842 81 G l SLLLLLLVLL LF ALAFSGL G L L I S T L ARS Q EQ A SAISNL V IL P LTF LSG AFF P IESL P G W L Q A IA YLN PLT YFVEAL R 160
170 180 190 200
....*....|....*....|....*....|....*....|
gi 666885825 341 I LF VEKGDFTKIVNP L WAM L IIGM V CFS LA TVFLHLKI R K 380
Cdd:COG0842 161 A LF LGGAGLADVWPS L LVL L AFAV V LLA LA LRLFRRRL R G 200
ABC2_membrane_3
pfam12698 ABC-2 family transporter protein; This family is related to the ABC-2 membrane transporter ...
19-373
3.13e-22
ABC-2 family transporter protein; This family is related to the ABC-2 membrane transporter family pfam01061.
Pssm-ID: 463674 [Multi-domain]
Cd Length: 345
Bit Score: 96.30
E-value: 3.13e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 19 K ILRMLFIGA P VMYGF L V G SVY -- EKGKVTN LP IV VVDED Q S AM S QK L IQMFSENEVLKI V NVLNNTNQSRTVALKRDAP 96
Cdd:pfam12698 1 K SFLIITLLL P ILLIL L L G LIF sn AVNDPEE LP VA VVDED N S SL S RQ L VRALEASPTVNL V QYVDSEEEAKEALKNGKID 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 97 CVV VIP RD F ESQI L QKHYPELV V FVDA SN T L TANFASSNIN lcvatlka GIQIEGLKKQGLSQKI A ETQYE P FKTTFIKE 176
Cdd:pfam12698 81 GLL VIP KG F SKDL L KGESATVT V YINS SN L L VSKLILNALQ -------- SLLQQLNASALVLLLE A LSTSA P IPVESTPL 152
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 177 NIRSGN Y L Y FMLP g VL L TVFQQVLLLGL A L S FSS E F E NNTFKD L VKKMSN P FGLIFV K VIPYL L MSMGI L WLYYGFSVYY 256
Cdd:pfam12698 153 FNPQSG Y A Y YLVG - LI L MIIILIGAAII A V S IVE E K E SRIKER L LVSGVS P LQYWLG K ILGDF L VGLLQ L LIILLLLFGI 231
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 257 RL P LHTDWFPFAS a TF L FVFSVCCI G I L GSI L LP N QLK A TEVLMV V ATPSFILS G FTW PL SQM P VWV Q N I ANA IP LTHYL 336
Cdd:pfam12698 232 GI P FGNLGLLLLL - FL L YGLAYIAL G Y L LGS L FK N SED A QSIIGI V ILLLSGFF G GLF PL EDP P SFL Q W I FSI IP FFSPI 310
330 340 350
....*....|....*....|....*....|....*...
gi 666885825 337 K - IY R ILF vek GD FTKIVN P LWAM L IIGM V CFS L ATVF 373
Cdd:pfam12698 311 D g LL R LIY --- GD SLWEIA P SLII L LLFA V VLL L LALL 345
ABC2_perm_RbbA
NF033858 ribosome-associated ATPase/putative transporter RbbA;
45-374
9.14e-09
ribosome-associated ATPase/putative transporter RbbA;
Pssm-ID: 468210 [Multi-domain]
Cd Length: 907
Bit Score: 57.44
E-value: 9.14e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 45 V T NL PIV V V D E DQ SAM S QKLIQM F S ------ E NEVLKIVNV L NNTNQ S RTVA L krdapc VVV IP RD F ESQI L QKHY PE LV 118
Cdd:NF033858 580 V E NL TFA V L D R DQ TPE S RAYLLN F A gsryfi E QPPIADYAE L DRRMR S GELS L ------ AIE IP PG F GRDL L RGRP PE VG 653
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 119 VFV D ASNTLT A nfassninlcv A T LKAGI Q ie G LKK Q G L SQKIA E TQYEPFKTTFIK E ------- NIR S gny L YF M L P G V 191
Cdd:NF033858 654 AWI D GAMPFR A ----------- E T IRGYV Q -- G MHQ Q W L ADLAR E RGGAAAASPATI E tryrynp DFK S --- L PA M V P A V 717
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 192 L ltvfqq V LLL G L ------ ALS FSS E fenntf K D L vkkmsnpf G L I ------------ F V -- K VI PY LLMS M GILW L YYG 251
Cdd:NF033858 718 I ------ P LLL M L ipamlt ALS VVR E ------ K E L -------- G S I tnlyvtpvtrle F L lg K QL PY VALA M LNFL L LVL 777
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 252 FS V Y - YRL PL HTDWFPF A SATF L F V FSVCCI G I L G S ILLPN Q LK A --- T EV L MVVATPS F il SG FTW P L S QMPVWVQN I A 327
Cdd:NF033858 778 LA V F v FGV PL KGSFLAL A LGAL L Y V TATTGL G L L I S TFTRS Q IA A ifg T AI L TLIPAVQ F -- SG LLD P V S SLEGAGRL I G 855
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 666885825 328 NAI P L T HY L K I Y R IL F V e KG - D F TKIVNPLW A MLIIGM V CFS L ATVF L 374
Cdd:NF033858 856 RIF P A T YF L T I S R GT F T - KG l G F ADLWPSFL A LAAFIP V LLG L SVLL L 902
YhgE
COG1511 Uncharacterized membrane protein YhgE, phage infection protein (PIP) family [Function unknown]; ...
8-224
5.79e-07
Uncharacterized membrane protein YhgE, phage infection protein (PIP) family [Function unknown];
Pssm-ID: 441120
Cd Length: 225
Bit Score: 49.94
E-value: 5.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 8 IA RE F K LF F G NK ILRMLF I GA --- P VM Y GF L VGS ---- V Y ek G KVT NLP IV VV D ED QS A -------- MSQK L IQMFSE N E 72
Cdd:COG1511 1 FK RE L K RL F K NK LALIAL I AL ilv P LL Y AG L YLW afwd P Y -- G NLD NLP VA VV N ED KG A tvdgktvn LGDE L VDELKD N D 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 73 VLKIVN V lnntnq S RTV A L K R ------ D A pc V V VIP R DF ESQIL ----- QKHYPELVVFVDAS N tlta N FAS S N I nlcva 141
Cdd:COG1511 79 SFDWQF V ------ S EEE A E K G lkdgky Y A -- V I VIP E DF SANLA sllsd DPEKATITYYTNEA N ---- N YLA S K I ----- 141
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 142 T LK A GIQI eglk KQGLSQKIA ET QY E --- P FKTTFIKE N i RSG NY LYFML P GV L - L TVFQQV LLL G L A L SFSSEFENNTF 217
Cdd:COG1511 142 T DT A ATTV ---- VDQVNSQVT ET YA E tvs P VALKTEAL N - PVP NY GSGLA P FF L s L ALWVGA LLL F L L L RPLVDRAGASL 216
....*..
gi 666885825 218 KD L VKKM 224
Cdd:COG1511 217 DR L NELF 223
Name
Accession
Description
Interval
E-value
YadH
COG0842 ABC-type multidrug transport system, permease component [Defense mechanisms];
183-380
2.33e-30
ABC-type multidrug transport system, permease component [Defense mechanisms];
Pssm-ID: 440604 [Multi-domain]
Cd Length: 200
Bit Score: 115.30
E-value: 2.33e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 183 YL Y F ML PG V L LTVFQQVL L LGL ALS FSS E F E NN T FKD L VKKMSNPFGLIFV KV IP YLL MSMGILW L YYGFSVY - YRL PL H 261
Cdd:COG0842 1 YL A F LV PG L L AMSLLFTA L MLT ALS IAR E R E QG T LER L LVTPVSRLEILLG KV LA YLL RGLLQAL L VLLVALL f FGV PL R 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 262 T - DWFPFASATF LF VFSVCCI G I L G S I L LPN Q LK A TEVLMV V AT P SFI LSG FTW P LSQM P V W V Q N IA NAI PLT HYLKIY R 340
Cdd:COG0842 81 G l SLLLLLLVLL LF ALAFSGL G L L I S T L ARS Q EQ A SAISNL V IL P LTF LSG AFF P IESL P G W L Q A IA YLN PLT YFVEAL R 160
170 180 190 200
....*....|....*....|....*....|....*....|
gi 666885825 341 I LF VEKGDFTKIVNP L WAM L IIGM V CFS LA TVFLHLKI R K 380
Cdd:COG0842 161 A LF LGGAGLADVWPS L LVL L AFAV V LLA LA LRLFRRRL R G 200
ABC2_membrane_3
pfam12698 ABC-2 family transporter protein; This family is related to the ABC-2 membrane transporter ...
19-373
3.13e-22
ABC-2 family transporter protein; This family is related to the ABC-2 membrane transporter family pfam01061.
Pssm-ID: 463674 [Multi-domain]
Cd Length: 345
Bit Score: 96.30
E-value: 3.13e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 19 K ILRMLFIGA P VMYGF L V G SVY -- EKGKVTN LP IV VVDED Q S AM S QK L IQMFSENEVLKI V NVLNNTNQSRTVALKRDAP 96
Cdd:pfam12698 1 K SFLIITLLL P ILLIL L L G LIF sn AVNDPEE LP VA VVDED N S SL S RQ L VRALEASPTVNL V QYVDSEEEAKEALKNGKID 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 97 CVV VIP RD F ESQI L QKHYPELV V FVDA SN T L TANFASSNIN lcvatlka GIQIEGLKKQGLSQKI A ETQYE P FKTTFIKE 176
Cdd:pfam12698 81 GLL VIP KG F SKDL L KGESATVT V YINS SN L L VSKLILNALQ -------- SLLQQLNASALVLLLE A LSTSA P IPVESTPL 152
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 177 NIRSGN Y L Y FMLP g VL L TVFQQVLLLGL A L S FSS E F E NNTFKD L VKKMSN P FGLIFV K VIPYL L MSMGI L WLYYGFSVYY 256
Cdd:pfam12698 153 FNPQSG Y A Y YLVG - LI L MIIILIGAAII A V S IVE E K E SRIKER L LVSGVS P LQYWLG K ILGDF L VGLLQ L LIILLLLFGI 231
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 257 RL P LHTDWFPFAS a TF L FVFSVCCI G I L GSI L LP N QLK A TEVLMV V ATPSFILS G FTW PL SQM P VWV Q N I ANA IP LTHYL 336
Cdd:pfam12698 232 GI P FGNLGLLLLL - FL L YGLAYIAL G Y L LGS L FK N SED A QSIIGI V ILLLSGFF G GLF PL EDP P SFL Q W I FSI IP FFSPI 310
330 340 350
....*....|....*....|....*....|....*...
gi 666885825 337 K - IY R ILF vek GD FTKIVN P LWAM L IIGM V CFS L ATVF 373
Cdd:pfam12698 311 D g LL R LIY --- GD SLWEIA P SLII L LLFA V VLL L LALL 345
ABC2_membrane
pfam01061 ABC-2 type transporter;
185-341
4.50e-10
ABC-2 type transporter;
Pssm-ID: 426023 [Multi-domain]
Cd Length: 204
Bit Score: 58.82
E-value: 4.50e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 185 YFML PG V L - LTVFQQVLLLGLAL S FSS E F E NNTF - KD L VKKMSN P FGLIFV K VIPY L LM S M g ILW L YYGFS VY YRLP L HT 262
Cdd:pfam01061 43 GLNR PG L L f FSILFNAFSALSGI S PVF E K E RGVL y RE L ASPLYS P SAYVLA K ILSE L PL S L - LQS L IFLLI VY FMVG L PP 121
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 263 DWFP F AS --- ATF L FVFSVCCI G ILG S I L L P NQLK A TEVLMV V AT P SFI LSGF TW P LSQ MPVW V Q N I ANAI PLT HYLKIY 339
Cdd:pfam01061 122 SAGR F FL fll VLL L TALAASSL G LFI S A L A P SFED A SQLGPL V LL P LLL LSGF FI P IDS MPVW W Q W I YYLN PLT YAIEAL 201
..
gi 666885825 340 R I 341
Cdd:pfam01061 202 R A 203
ABC2_perm_RbbA
NF033858 ribosome-associated ATPase/putative transporter RbbA;
45-374
9.14e-09
ribosome-associated ATPase/putative transporter RbbA;
Pssm-ID: 468210 [Multi-domain]
Cd Length: 907
Bit Score: 57.44
E-value: 9.14e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 45 V T NL PIV V V D E DQ SAM S QKLIQM F S ------ E NEVLKIVNV L NNTNQ S RTVA L krdapc VVV IP RD F ESQI L QKHY PE LV 118
Cdd:NF033858 580 V E NL TFA V L D R DQ TPE S RAYLLN F A gsryfi E QPPIADYAE L DRRMR S GELS L ------ AIE IP PG F GRDL L RGRP PE VG 653
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 119 VFV D ASNTLT A nfassninlcv A T LKAGI Q ie G LKK Q G L SQKIA E TQYEPFKTTFIK E ------- NIR S gny L YF M L P G V 191
Cdd:NF033858 654 AWI D GAMPFR A ----------- E T IRGYV Q -- G MHQ Q W L ADLAR E RGGAAAASPATI E tryrynp DFK S --- L PA M V P A V 717
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 192 L ltvfqq V LLL G L ------ ALS FSS E fenntf K D L vkkmsnpf G L I ------------ F V -- K VI PY LLMS M GILW L YYG 251
Cdd:NF033858 718 I ------ P LLL M L ipamlt ALS VVR E ------ K E L -------- G S I tnlyvtpvtrle F L lg K QL PY VALA M LNFL L LVL 777
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 252 FS V Y - YRL PL HTDWFPF A SATF L F V FSVCCI G I L G S ILLPN Q LK A --- T EV L MVVATPS F il SG FTW P L S QMPVWVQN I A 327
Cdd:NF033858 778 LA V F v FGV PL KGSFLAL A LGAL L Y V TATTGL G L L I S TFTRS Q IA A ifg T AI L TLIPAVQ F -- SG LLD P V S SLEGAGRL I G 855
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 666885825 328 NAI P L T HY L K I Y R IL F V e KG - D F TKIVNPLW A MLIIGM V CFS L ATVF L 374
Cdd:NF033858 856 RIF P A T YF L T I S R GT F T - KG l G F ADLWPSFL A LAAFIP V LLG L SVLL L 902
TagG
COG1682 ABC-type polysaccharide/teichoic acid/polyol phosphate export permease [Carbohydrate transport ...
171-381
3.93e-08
ABC-type polysaccharide/teichoic acid/polyol phosphate export permease [Carbohydrate transport and metabolism];
Pssm-ID: 441288 [Multi-domain]
Cd Length: 258
Bit Score: 53.65
E-value: 3.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 171 TTFIKENIRSGN Y LY F M L P G V L L - TV F QQV L LL G lalsf S SEFEN N tf KD L V KK MS - NPFG L IFVK V IPY L LMSMGI L WL 248
Cdd:COG1682 51 GVLLRAPSGGVP Y AL F L L A G L L P w NF F SEA L NR G ----- S GSIVA N -- AG L I KK VY f PREI L PLAR V LSA L VNFLIS L VV 123
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 249 YYGFSVYYRL P LHTDWFPFAS A TF L FVFSVCCI G I L GSI L LPNQLKATEVLMVVATPS F I LS GFTW PLS QM P VWVQNIAN 328
Cdd:COG1682 124 LLVVLLLFGV P PSWTLLLLPL A LL L LLLFGLGL G L L LAA L NVFFRDVQQIVGLLLQLL F F LS PVFY PLS TL P EPLRWLLL 203
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 666885825 329 AI PLTH YLKIY R ILFVEKGDFT ki VNP L WAM L IIGM V CFS L ATVFLHLKI R KL 381
Cdd:COG1682 204 LN PLTH IIELF R AALLGGYLPD -- WLS L LYA L LVSL V LLL L GLLLFRRLR R RF 254
YhgE
COG1511 Uncharacterized membrane protein YhgE, phage infection protein (PIP) family [Function unknown]; ...
8-224
5.79e-07
Uncharacterized membrane protein YhgE, phage infection protein (PIP) family [Function unknown];
Pssm-ID: 441120
Cd Length: 225
Bit Score: 49.94
E-value: 5.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 8 IA RE F K LF F G NK ILRMLF I GA --- P VM Y GF L VGS ---- V Y ek G KVT NLP IV VV D ED QS A -------- MSQK L IQMFSE N E 72
Cdd:COG1511 1 FK RE L K RL F K NK LALIAL I AL ilv P LL Y AG L YLW afwd P Y -- G NLD NLP VA VV N ED KG A tvdgktvn LGDE L VDELKD N D 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 73 VLKIVN V lnntnq S RTV A L K R ------ D A pc V V VIP R DF ESQIL ----- QKHYPELVVFVDAS N tlta N FAS S N I nlcva 141
Cdd:COG1511 79 SFDWQF V ------ S EEE A E K G lkdgky Y A -- V I VIP E DF SANLA sllsd DPEKATITYYTNEA N ---- N YLA S K I ----- 141
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 142 T LK A GIQI eglk KQGLSQKIA ET QY E --- P FKTTFIKE N i RSG NY LYFML P GV L - L TVFQQV LLL G L A L SFSSEFENNTF 217
Cdd:COG1511 142 T DT A ATTV ---- VDQVNSQVT ET YA E tvs P VALKTEAL N - PVP NY GSGLA P FF L s L ALWVGA LLL F L L L RPLVDRAGASL 216
....*..
gi 666885825 218 KD L VKKM 224
Cdd:COG1511 217 DR L NELF 223
NatB
COG1668 ABC-type Na+ efflux pump, permease component NatB [Energy production and conversion, Inorganic ...
1-373
9.08e-06
ABC-type Na+ efflux pump, permease component NatB [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 441274 [Multi-domain]
Cd Length: 402
Bit Score: 47.21
E-value: 9.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 1 M KNILQLIAR E F K LFFGN K - I L RMLFIGAPVMYGF L VGSVY -- EKGKVTN L PIV VVDE DQ sam SQK L IQMFS E NE V - LKI 76
Cdd:COG1668 1 M NKLWLVAKK E L K ERLRD K s F L ISTLLLPLLLVPL L GLGML fm SGNDDEP L KVA VVDE SG --- APA L AEALK E AA V n FEV 77
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 77 V NVLNNTNQSRTVALKRDAPC V V VIP R DF ES qilq KHYPELVVFV D A S NTLT anf A S S NIN lcv AT L KAGIQIEG L KKQ G 156
Cdd:COG1668 78 V PEVADEEEAEAAVEDGEIDA V L VIP E DF SL ---- ENPATVELYS D S S PDSS --- A V S RLE --- SA L SQALLALR L AAL G 147
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 157 L SQKIAETQYE P FKTTFIK - ENIRSGNYLYFM L PGV L LTVFQQVLLLGLALSFS S --- E F E NN T FKD L VKKM S n P FG L IF 232
Cdd:COG1668 148 L DPEQLQALLA P VSVETVD l SKASPEEGAGYI L GYL L PFLLYMFIFTYGSMIAD S vae E K E SR T LEI L LSSV S - P RQ L LL 226
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 233 V K VIPYL L MS ------- MGILWLYYGFSVYYR L P - L HTDWFPFASATFLFV F SVCCIGILGSILL ------ PNQ lka T E V 298
Cdd:COG1668 227 G K ILGIG L VG ltqallw LVGGLIGLLLASGLG L S a L SGLNLSPGLLLLFLL F FLLGYLLYAALFA algala SSF --- K E A 303
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666885825 299 ------ L MVVATPS F ILSG F T wp LS QMPVWVQNIANA IP L T H - Y L KIY R ILF vek G DFTKI vn PLWAM L IIGMVCFS L AT 371
Cdd:COG1668 304 qqylsp L TLLLMIP F FVAM F V -- LS NPDGPLATVLSL IP F T S p I L MPL R LAL --- G EVPWW -- EILLS L ALLLATAV L LL 376
..
gi 666885825 372 VF 373
Cdd:COG1668 377 WL 378
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
