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Conserved domains on  [gi|612495055|gb|AHX04898|]
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drug resistance transporter, Bcr/CflA subfamily protein [Ehrlichia japonica]

Protein Classification

multidrug effflux MFS transporter( domain architecture ID 13022939)

multidrug resistance (MDR) MFS transporter is a drug/H+ antiporter (DHA) that mediates the efflux of one or more from a variety of drugs and toxic compounds, and confer resistance to these compounds

CATH:  1.20.1250.20
Gene Ontology:  GO:0022857|GO:0055085
PubMed:  26758938|26098515
SCOP:  3000310
TCDB:  2.A.1

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
21-374 2.51e-71

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 228.61  E-value: 2.51e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  21 ISSDIYLPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLII 100
Cdd:cd17320   13 LAIDMYLPALPAIARDLGASASAVQLTLSAYLLGFALGQLLYGPLSDRFGRRPVLLAGLLLFILASLLCALASSIEQLLI 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 101 MRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHGyHWNVLFIIISIMAILVLGCLF 180
Cdd:cd17320   93 ARFLQGLGAAAGSVVARAIVRDLYSGAELAKIFSLLMMILAIAPALAPLLGGLLLLFF-GWRAIFVFLALLGLLLLLLVL 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 181 VFLKETIILGKIDSNISflSVMRKYKELILNIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAINVAA 260
Cdd:cd17320  172 LFLPETLPEEKRKPLLS--SLLRAYKRVLKNRRFLGYALALGLSFAGLFAYLAAAPFIYIEQLGLSPAQFGLLFALNAIA 249
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 261 YIVGAVLNQRFVERFGINNMLLLGLILTTLSDMSVLILYQMLEITPLLAEIMWIPSGMGIAFILGNNMTAAFSEIREP-G 339
Cdd:cd17320  250 LILGSLLNGRLVRRFGPRRLLRLGLLLLLAAALVLLLAALLGGLSLWPLVAPLFLIFFGFGLIFPNATSLALEPFPHVaG 329
                        330       340       350
                 ....*....|....*....|....*....|....*
gi 612495055 340 IGSAFILFLQTIFGALGIYILGCFYDGTLIPVILF 374
Cdd:cd17320  330 TASALLGFLQFLIGALAGALVGLLPNGTALPMGLL 364
 
Name Accession Description Interval E-value
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
21-374 2.51e-71

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 228.61  E-value: 2.51e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  21 ISSDIYLPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLII 100
Cdd:cd17320   13 LAIDMYLPALPAIARDLGASASAVQLTLSAYLLGFALGQLLYGPLSDRFGRRPVLLAGLLLFILASLLCALASSIEQLLI 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 101 MRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHGyHWNVLFIIISIMAILVLGCLF 180
Cdd:cd17320   93 ARFLQGLGAAAGSVVARAIVRDLYSGAELAKIFSLLMMILAIAPALAPLLGGLLLLFF-GWRAIFVFLALLGLLLLLLVL 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 181 VFLKETIILGKIDSNISflSVMRKYKELILNIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAINVAA 260
Cdd:cd17320  172 LFLPETLPEEKRKPLLS--SLLRAYKRVLKNRRFLGYALALGLSFAGLFAYLAAAPFIYIEQLGLSPAQFGLLFALNAIA 249
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 261 YIVGAVLNQRFVERFGINNMLLLGLILTTLSDMSVLILYQMLEITPLLAEIMWIPSGMGIAFILGNNMTAAFSEIREP-G 339
Cdd:cd17320  250 LILGSLLNGRLVRRFGPRRLLRLGLLLLLAAALVLLLAALLGGLSLWPLVAPLFLIFFGFGLIFPNATSLALEPFPHVaG 329
                        330       340       350
                 ....*....|....*....|....*....|....*
gi 612495055 340 IGSAFILFLQTIFGALGIYILGCFYDGTLIPVILF 374
Cdd:cd17320  330 TASALLGFLQFLIGALAGALVGLLPNGTALPMGLL 364
PRK11102 PRK11102
Bcr/CflA family multidrug efflux MFS transporter;
24-280 7.45e-46

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182964 [Multi-domain]  Cd Length: 377  Bit Score: 162.01  E-value: 7.45e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  24 DIYLPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRF 103
Cdd:PRK11102   8 DMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRF 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 104 VQGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAiIAHGYHWNVLFIIISIMAILVLGCLFVFL 183
Cdd:PRK11102  88 LHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGW-LLVWFSWHAIFWVLALAAILAAALVFFFI 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 184 KETIILGKiDSNISFLSVMRKYKELILNIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAINVAAYIV 263
Cdd:PRK11102 167 PETLPKER-RQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFV 245
                        250
                 ....*....|....*..
gi 612495055 264 GAVLNQRFVERFGINNM 280
Cdd:PRK11102 246 MTIINSRFVRRVGALNM 262
efflux_Bcr_CflA TIGR00710
drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a ...
24-373 2.75e-45

drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.


Pssm-ID: 273229 [Multi-domain]  Cd Length: 385  Bit Score: 160.63  E-value: 2.75e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055   24 DIYLPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRF 103
Cdd:TIGR00710  22 DMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRF 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  104 VQGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVLGCLFVFL 183
Cdd:TIGR00710 102 VQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW-LSWHAIFAFLSLAGILLSALIFFIL 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  184 KETIILGKIDSNISFLSVMrkyKELILNIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAINVAAYIV 263
Cdd:TIGR00710 181 PETLPYEARIQISTYFETF---LLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIF 257
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  264 GAVLNQRFVERFGINNMLLLGLILTTLSDM-SVLILYQMLEITPLLAEIMWIpSGMGIAFILGNNMTAAFSEI-REPGIG 341
Cdd:TIGR00710 258 GGFLNGRFIKKWGAKSLLRMGLILFAVSAVlLEITAILGLGSWAMIIGPMMF-VGIGNSMISSIAMAYALEDFpHVAGTA 336
                         330       340       350
                  ....*....|....*....|....*....|..
gi 612495055  342 SAFILFLQTIFGALGIYILGCFYDGTLIPVIL 373
Cdd:TIGR00710 337 SALFGTLRLVLGAIVGYLVSLIHGNTAWPMSL 368
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
21-355 3.82e-37

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 137.80  E-value: 3.82e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  21 ISSDIYLPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLII 100
Cdd:COG2814   24 LGIGIVLPALPLIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLCALAPSLWLLLA 103
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 101 MRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVLGCLF 180
Cdd:COG2814  104 ARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADL-FGWRWVFLVNAVLALLALLLLL 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 181 VFLKETIILGKidsnisfLSVMRKYKELILNIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAINVAA 260
Cdd:COG2814  183 RLLPESRPAAR-------ARLRGSLRELLRRPRLLLLLLLAFLLGFGFFALFTYLPLYLQEVLGLSASAAGLLLALFGLG 255
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 261 YIVGAVLNQRFVERFGINNMLLLGLILTTlsdMSVLILYQMLEITPLLAEIMWIPSGMGIAFILGNNMTAAFSEIREPGI 340
Cdd:COG2814  256 GVLGALLAGRLADRFGRRRLLLIGLLLLA---LGLLLLALAGSLWLLLLALFLLGFGFGLLFPLLQALVAELAPPEARGR 332
                        330
                 ....*....|....*
gi 612495055 341 GSAFILFLQTIFGAL 355
Cdd:COG2814  333 ASGLYNSAFFLGGPL 347
MFS_1 pfam07690
Major Facilitator Superfamily;
19-356 4.14e-24

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 102.11  E-value: 4.14e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055   19 SDISSDIYLPSLPK-ISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIV 97
Cdd:pfam07690   8 AALGRSLLGPALPLlLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLWL 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055   98 LIIMRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVLG 177
Cdd:pfam07690  88 LLVLRVLQGLGAGALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASL-FGWRAAFLILAILSLLAAV 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  178 CLFVFLKETIILGKIDSNISFLSVMRKYKELILNIRFCGFALIqsFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAIN 257
Cdd:pfam07690 167 LLLLPRPPPESKRPKPAEEARLSLIVAWKALLRDPVLWLLLAL--LLFGFAFFGLLTYLPLYQEVLGLSALLAGLLLGLG 244
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  258 VAAYIVGAVLNQRFVERFGINNMLLLGLILTTLSDMSVLILYQMLEITPLLAEIMWIPSGMGIAFILGNNMTAAFSEIRE 337
Cdd:pfam07690 245 GLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPALNALVSDLAPKEE 324
                         330
                  ....*....|....*....
gi 612495055  338 PGIGSAFILFLQTIFGALG 356
Cdd:pfam07690 325 RGTASGLYNTAGSLGGALG 343
 
Name Accession Description Interval E-value
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
21-374 2.51e-71

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 228.61  E-value: 2.51e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  21 ISSDIYLPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLII 100
Cdd:cd17320   13 LAIDMYLPALPAIARDLGASASAVQLTLSAYLLGFALGQLLYGPLSDRFGRRPVLLAGLLLFILASLLCALASSIEQLLI 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 101 MRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHGyHWNVLFIIISIMAILVLGCLF 180
Cdd:cd17320   93 ARFLQGLGAAAGSVVARAIVRDLYSGAELAKIFSLLMMILAIAPALAPLLGGLLLLFF-GWRAIFVFLALLGLLLLLLVL 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 181 VFLKETIILGKIDSNISflSVMRKYKELILNIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAINVAA 260
Cdd:cd17320  172 LFLPETLPEEKRKPLLS--SLLRAYKRVLKNRRFLGYALALGLSFAGLFAYLAAAPFIYIEQLGLSPAQFGLLFALNAIA 249
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 261 YIVGAVLNQRFVERFGINNMLLLGLILTTLSDMSVLILYQMLEITPLLAEIMWIPSGMGIAFILGNNMTAAFSEIREP-G 339
Cdd:cd17320  250 LILGSLLNGRLVRRFGPRRLLRLGLLLLLAAALVLLLAALLGGLSLWPLVAPLFLIFFGFGLIFPNATSLALEPFPHVaG 329
                        330       340       350
                 ....*....|....*....|....*....|....*
gi 612495055 340 IGSAFILFLQTIFGALGIYILGCFYDGTLIPVILF 374
Cdd:cd17320  330 TASALLGFLQFLIGALAGALVGLLPNGTALPMGLL 364
PRK11102 PRK11102
Bcr/CflA family multidrug efflux MFS transporter;
24-280 7.45e-46

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182964 [Multi-domain]  Cd Length: 377  Bit Score: 162.01  E-value: 7.45e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  24 DIYLPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRF 103
Cdd:PRK11102   8 DMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRF 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 104 VQGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAiIAHGYHWNVLFIIISIMAILVLGCLFVFL 183
Cdd:PRK11102  88 LHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGW-LLVWFSWHAIFWVLALAAILAAALVFFFI 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 184 KETIILGKiDSNISFLSVMRKYKELILNIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAINVAAYIV 263
Cdd:PRK11102 167 PETLPKER-RQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFV 245
                        250
                 ....*....|....*..
gi 612495055 264 GAVLNQRFVERFGINNM 280
Cdd:PRK11102 246 MTIINSRFVRRVGALNM 262
efflux_Bcr_CflA TIGR00710
drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a ...
24-373 2.75e-45

drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.


Pssm-ID: 273229 [Multi-domain]  Cd Length: 385  Bit Score: 160.63  E-value: 2.75e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055   24 DIYLPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRF 103
Cdd:TIGR00710  22 DMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRF 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  104 VQGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVLGCLFVFL 183
Cdd:TIGR00710 102 VQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW-LSWHAIFAFLSLAGILLSALIFFIL 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  184 KETIILGKIDSNISFLSVMrkyKELILNIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAINVAAYIV 263
Cdd:TIGR00710 181 PETLPYEARIQISTYFETF---LLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIF 257
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  264 GAVLNQRFVERFGINNMLLLGLILTTLSDM-SVLILYQMLEITPLLAEIMWIpSGMGIAFILGNNMTAAFSEI-REPGIG 341
Cdd:TIGR00710 258 GGFLNGRFIKKWGAKSLLRMGLILFAVSAVlLEITAILGLGSWAMIIGPMMF-VGIGNSMISSIAMAYALEDFpHVAGTA 336
                         330       340       350
                  ....*....|....*....|....*....|..
gi 612495055  342 SAFILFLQTIFGALGIYILGCFYDGTLIPVIL 373
Cdd:TIGR00710 337 SALFGTLRLVLGAIVGYLVSLIHGNTAWPMSL 368
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
21-355 3.82e-37

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 137.80  E-value: 3.82e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  21 ISSDIYLPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLII 100
Cdd:COG2814   24 LGIGIVLPALPLIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLCALAPSLWLLLA 103
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 101 MRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVLGCLF 180
Cdd:COG2814  104 ARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADL-FGWRWVFLVNAVLALLALLLLL 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 181 VFLKETIILGKidsnisfLSVMRKYKELILNIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAINVAA 260
Cdd:COG2814  183 RLLPESRPAAR-------ARLRGSLRELLRRPRLLLLLLLAFLLGFGFFALFTYLPLYLQEVLGLSASAAGLLLALFGLG 255
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 261 YIVGAVLNQRFVERFGINNMLLLGLILTTlsdMSVLILYQMLEITPLLAEIMWIPSGMGIAFILGNNMTAAFSEIREPGI 340
Cdd:COG2814  256 GVLGALLAGRLADRFGRRRLLLIGLLLLA---LGLLLLALAGSLWLLLLALFLLGFGFGLLFPLLQALVAELAPPEARGR 332
                        330
                 ....*....|....*
gi 612495055 341 GSAFILFLQTIFGAL 355
Cdd:COG2814  333 ASGLYNSAFFLGGPL 347
PRK15402 PRK15402
MdfA family multidrug efflux MFS transporter;
21-251 1.03e-30

MdfA family multidrug efflux MFS transporter;


Pssm-ID: 185300 [Multi-domain]  Cd Length: 406  Bit Score: 121.58  E-value: 1.03e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  21 ISSDIYLPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLII 100
Cdd:PRK15402  27 IANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTL 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 101 MRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNISIvnMA-VAL-SPVLGPILGSAIIaHGYHWNVLFIIISIMAILVLGC 178
Cdd:PRK15402 107 LRFLQGIGLCFIGAVGYAAIQESFEEADAIKITAL--MAnVALlAPLLGPLVGAALI-HVLPWRGMFVLFAALAALSFFG 183
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 612495055 179 LFVFLKETIilGKIDSNISFLSVMRKYKELILNIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVPVSYYG 251
Cdd:PRK15402 184 LWRAMPETA--GRVGEKLSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYG 254
emrD PRK11652
multidrug transporter EmrD;
25-320 2.76e-27

multidrug transporter EmrD;


Pssm-ID: 183259 [Multi-domain]  Cd Length: 394  Bit Score: 111.92  E-value: 2.76e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  25 IYLPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFV 104
Cdd:PRK11652  26 IYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAI 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 105 QGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSaIIAHGYHWNVLFIIISIMAILVLGCLFVFLK 184
Cdd:PRK11652 106 QGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGG-LLTTLFGWRACYLFLLLLGAGVTFSMARWMP 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 185 ETIILGKIDSnisflSVMRKYKELILNIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVP---VSYYgyFVAiNVAAY 261
Cdd:PRK11652 185 ETRPADARRT-----RVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSsmtVSIL--FIL-PIPAA 256
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 612495055 262 IVGAVLNQRFVERFGinnmlllglilttlsdmsvLILYQMLEITPLLAEIMWIPSGMGI 320
Cdd:PRK11652 257 FFGAWFAGRPNKRFS-------------------TLMWQSVICCLLAGLLMWIPGWFGV 296
PRK11043 PRK11043
Bcr/CflA family multidrug efflux MFS transporter;
21-203 3.68e-27

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182924 [Multi-domain]  Cd Length: 401  Bit Score: 111.52  E-value: 3.68e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  21 ISSDIYLPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLII 100
Cdd:PRK11043  20 LATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLV 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 101 MRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAiLVLGCLF 180
Cdd:PRK11043 100 LRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH-FGWQAIFATLFAIT-LLLILPT 177
                        170       180
                 ....*....|....*....|....
gi 612495055 181 VFLKETIILGKIDSN-ISFLSVMR 203
Cdd:PRK11043 178 LRLKPSKKARKQSQDaLTFKQLLK 201
PRK15403 PRK15403
multidrug efflux MFS transporter MdtM;
21-273 1.38e-25

multidrug efflux MFS transporter MdtM;


Pssm-ID: 237958 [Multi-domain]  Cd Length: 413  Bit Score: 107.22  E-value: 1.38e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  21 ISSDIYLPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLII 100
Cdd:PRK15403  30 LTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLI 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 101 MRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIaHGYHWNVLFIIISIMAILVLGCLF 180
Cdd:PRK15403 110 ARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALM-HFVHWKVLFAIIAVMGLIAFVGLL 188
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 181 VFLKETIILGkiDSNISFLSVMRKYKELILNIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAINVAA 260
Cdd:PRK15403 189 LAMPETVKRG--AVPFSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGA 266
                        250
                 ....*....|...
gi 612495055 261 YIVGAVLNQRFVE 273
Cdd:PRK15403 267 VIVANAIVARFVK 279
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
21-267 3.26e-24

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 101.43  E-value: 3.26e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  21 ISSDIYLPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLII 100
Cdd:COG0477   28 LDFTIVNVALPSIAADLGASSAQLGWIVSAYLLGRAIGLLLFGRLGDRYGRKRVLLIGLLLFGLASLLCGLAPSPELLIA 107
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 101 MRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVLGcLF 180
Cdd:COG0477  108 ARALQGIGAGGLMPGALALIAELFPARERGRALGLWGAAIGLGLALGPLLGGLLVAA-LGWRWIFLINAPLGLLALV-LR 185
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 181 VFLKETIILGKIDSNISFLSVMRKYKELILNIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAINVAA 260
Cdd:COG0477  186 LRLPESRGLLLALLALALAALLLAALALALLALLLLLLLLLLALLALLLAGAALLLLLALLLLALLLLLALLLLAALLLL 265

                 ....*..
gi 612495055 261 YIVGAVL 267
Cdd:COG0477  266 LLLLLLL 272
MFS_1 pfam07690
Major Facilitator Superfamily;
19-356 4.14e-24

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 102.11  E-value: 4.14e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055   19 SDISSDIYLPSLPK-ISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIV 97
Cdd:pfam07690   8 AALGRSLLGPALPLlLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLWL 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055   98 LIIMRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVLG 177
Cdd:pfam07690  88 LLVLRVLQGLGAGALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASL-FGWRAAFLILAILSLLAAV 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  178 CLFVFLKETIILGKIDSNISFLSVMRKYKELILNIRFCGFALIqsFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAIN 257
Cdd:pfam07690 167 LLLLPRPPPESKRPKPAEEARLSLIVAWKALLRDPVLWLLLAL--LLFGFAFFGLLTYLPLYQEVLGLSALLAGLLLGLG 244
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  258 VAAYIVGAVLNQRFVERFGINNMLLLGLILTTLSDMSVLILYQMLEITPLLAEIMWIPSGMGIAFILGNNMTAAFSEIRE 337
Cdd:pfam07690 245 GLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPALNALVSDLAPKEE 324
                         330
                  ....*....|....*....
gi 612495055  338 PGIGSAFILFLQTIFGALG 356
Cdd:pfam07690 325 RGTASGLYNTAGSLGGALG 343
PRK10473 PRK10473
MdtL family multidrug efflux MFS transporter;
24-244 2.35e-23

MdtL family multidrug efflux MFS transporter;


Pssm-ID: 182486 [Multi-domain]  Cd Length: 392  Bit Score: 100.48  E-value: 2.35e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  24 DIYLPSLPKI-SDFFAVDytiAQLTI--SLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLII 100
Cdd:PRK10473  20 DMYLVGLPRIaADLNASE---AQLHIafSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLA 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 101 MRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVLGCLF 180
Cdd:PRK10473  97 GRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK-FPWQSLFYTMAAMGILVLLLSL 175
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 612495055 181 VFLKETIILGKIDSnisfLSVMRKYKELILNIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMG 244
Cdd:PRK10473 176 FILKETRPARAPAA----SSKPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMG 235
2_A_01_02 TIGR00880
Multidrug resistance protein;
49-186 4.19e-23

Multidrug resistance protein;


Pssm-ID: 273318 [Multi-domain]  Cd Length: 141  Bit Score: 94.25  E-value: 4.19e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055   49 SLNLVGISISGLLYGPLS----DYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIKDMY 124
Cdd:TIGR00880   1 GLLLAGYALGQLIYSPLSglltDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIY 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 612495055  125 SGSECAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVLGCLFVFLKET 186
Cdd:TIGR00880  81 PPEERGVALGLMSAGIALGPLLGPPLGGVLAQF-LGWRAPFLFLAILALAAFILLAFLLPET 141
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
25-361 5.50e-22

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 96.47  E-value: 5.50e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  25 IYLPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFV 104
Cdd:cd17321   14 IVNVALPTIARDLGASPSQLQWVVNAYLLAFAALLLLAGRLGDRFGRKRVFLIGLALFGLASLLCALAPSLAFLIAARAL 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 105 QGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHGyHWNVLFIIISIMAILVlgclfvflk 184
Cdd:cd17321   94 QGIGAAAIMPASLALIAATFPGERRGRALGLWGAVVGIGAALGPLLGGLLLELF-GWRWIFLINVPIGLVA--------- 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 185 etiilgkidsnisflsvmrkykeLILNIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAINVAAYIVG 264
Cdd:cd17321  164 -----------------------LLLARTFSGAVLAAFLLGAALGGLLFLLPLYLQGVLGYSPLQAGLALLPLALAMLVA 220
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 265 AVLNQRFVERFGINNMLLLGLILTTLSDMSVLILYQMLEITPLLAEIMWIPSGMGIAFILGNNMTAAFSEIREPGIGSAF 344
Cdd:cd17321  221 APLAGRLADRFGPRLVLVAGLLLTAVGLLLLALLGADSSVWLLLPGLVLLGLGLGLFATPLTNAALSSVPKEKAGAASGI 300
                        330
                 ....*....|....*..
gi 612495055 345 ILFLQTIFGALGIYILG 361
Cdd:cd17321  301 LNTARQLGGALGVALLG 317
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
25-271 7.60e-21

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 93.02  E-value: 7.60e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  25 IYLPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFV 104
Cdd:cd17474   17 IVDPILPAIAEALGASPAQVGLLITAFTLPAAVLMPVAGVLADRFGRKKVLLPGLLLFGIGGLLCGLSDSFALLLAGRAL 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 105 QGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHGyhWNVLFIIISIMAILVLGCLFVFLK 184
Cdd:cd17474   97 QGIGAAGLGPLALTLIGDLFEGGERAKAMGLYEAALGLGIAVGPLLGGLLAAIS--WRYPFFLLAALIPVAFLAILFLLP 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 185 ETiilgKIDSNISFLSVMRKYKELILNIRFCGFALIqSFTIMWIWSCI-ANLPFIFVKDMGVPVS-----YYGYFVAINV 258
Cdd:cd17474  175 EP----KEKAKSSSATKLRDLKKALRGRGLLTFLVS-AFLYFFLYFAFlTYLPFLLELLYGISPIiigllFAGWSVLLAL 249
                        250
                 ....*....|...
gi 612495055 259 AAYIVGAVLNQRF 271
Cdd:cd17474  250 GSLFVGRLLKKRF 262
MFS_Tpo1_MDR_like cd17323
Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of ...
21-374 1.40e-20

Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of fungal multidrug resistance (MDR) transporters including several proteins from Saccharomyces cerevisiae such as polyamine transporters 1-4 (Tpo1-4), quinidine resistance proteins 1-3 (Qdr1-3), dityrosine transporter 1 (Dtr1), fluconazole resistance protein 1 (Flr1), and protein HOL1. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, Flr1 confers resistance to the azole derivative fluconazole while Tpo1 confers resistance and adaptation to quinidine and ketoconazole. The polyamine transporters are involved in the detoxification of excess polyamines in the cytoplasm. Tpo1-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340881 [Multi-domain]  Cd Length: 376  Bit Score: 92.25  E-value: 1.40e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  21 ISSDIYLPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLII 100
Cdd:cd17323   13 FGSSIYSPALPQIAEDFHVSEEVANLGVSLFVLGFGLGPLIWAPLSELYGRRPVYLVSLFIFVIFQIGCALAPNIAMLII 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 101 MRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVLGCLF 180
Cdd:cd17323   93 LRFLQGFFGSSPLAIGAGTIADLFTPEERGKAMGVYSLGPLLGPALGPIIGGFITQS-LGWRWIFWFLAIISGFCLILIF 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 181 VFLKETIILGkidsnisflsvmrkykelilnirfcgfaLIQSFTIMWIWSCIANLPFIFVK-----DMGVPVSYYGYFVA 255
Cdd:cd17323  172 LFLPIVLLLG----------------------------LYVGLVYAILYLFLTAFPYVFGEvygfsPGEVGLMYLPIGIG 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 256 InVAAYIVGAVLNQRFVERFGINNMLLLGLILTTLSDMSVLIL-------------YQMLEITPLLAEIMwIPSGMGIAF 322
Cdd:cd17323  224 A-LIGSIIGGRLSDYYYRRLKKKNGGKPEPEARLPPAFIGAFLfpiglfifgwtiyPHIHWIVPIIGSAF-FGFGLMLIF 301
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 612495055 323 ILGNNM------------TAAFSEIREPGiGSAFILFLQTIFGALGI---YILGCFYDGTLIPVILF 374
Cdd:cd17323  302 QSSLTYlvdsypkyaasaLAANTLVRSIF-AAIFPLFAQPMFNNLGVgwaFTLLAFISLAMIPIPFI 367
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
21-365 7.10e-20

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 90.30  E-value: 7.10e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  21 ISSDIYLPS--LPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVL 98
Cdd:cd17324   11 IGTTEYVIQglLPDIARDFGVSVAQAGLLVSAYALGYALGALLLGPLSDRIERRRLLLVLLLLFILGNLLAALAPSFALL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  99 IIMRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSaIIAHGYHWNVLFIIISIMAILVLGC 178
Cdd:cd17324   91 LLARALAGLAHGGFWAIAAAYAADLVPPEKRGRAIGLVFSGLTLGLVLGRPLGG-LLGQLLGWRAAFLAIAVLALLAALL 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 179 LFVFLKEtiILGKIDSNISFLSVMRKYKELILNIRFCGFALIQSFTIMWIWSCIAnlPFI----FVKDMGVPVSYYGYFV 254
Cdd:cd17324  170 LWRLLPS--LPPKKPGSLGLLSSLLLLLRNPRLRLAYLITFLLFGGFFALYTYLA--PFLtdvpGFSSSAIIGLLLLFGV 245
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 255 AINVAAYIVGavlnqRFVERFGINNMLLLGLILttlsdMSVLILYQMLEITPLLAEIMWIPSGMGIaFILGNNMTAAFSE 334
Cdd:cd17324  246 AGVVGSPLAG-----RLADRGGRRALLIALLLL-----AAALLLLTLLGPSPLLLLVGLVLWGLGF-FAAHSALQTRVLR 314
                        330       340       350
                 ....*....|....*....|....*....|...
gi 612495055 335 I--REPGIGSAFILFLQTIFGALGIYILGCFYD 365
Cdd:cd17324  315 LapEARGLASSLYLAAYNLGGALGAALGGLVLD 347
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
25-276 3.46e-19

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 88.40  E-value: 3.46e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  25 IYLPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFV 104
Cdd:cd17325   14 IIIPILPLYAESLGASVAQIGLIVAAYALAQLLFSPPAGRLSDRFGRKRLLLLGLLLLAVSTLLFAFATSYWQLLLARFL 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 105 QGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVLGCLFVFLK 184
Cdd:cd17325   94 QGLASAAVWPAAMALIADIAPPEERGRAMGIFSSAIGLGFLIGPLLGGLLADA-LGYRAPFLVCAALALLALVLALLLLP 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 185 ETIIlGKIDSNISFLSVMRKYKELILNIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAINVAAYIVG 264
Cdd:cd17325  173 EPRP-PPNKRAVSAARLRSGLRLLLRDRRLLALFLAIFVLAFAFGALEPFLPLYAAELGGLSPAQIGLLFGAQGLASALS 251
                        250
                 ....*....|..
gi 612495055 265 AVLNQRFVERFG 276
Cdd:cd17325  252 QPPAGKLSDRIG 263
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
30-367 1.76e-18

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 86.08  E-value: 1.76e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  30 LPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGA 109
Cdd:COG2271   33 APPLQADLGLSAAQLGLLASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLLWGLATLLFGFATSFWQLLLLRFLLGLGE 112
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 110 GVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVLGclfvflketiil 189
Cdd:COG2271  113 AGFFPAALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPLLGWLLAA-FGWRAAFLILGLPGLLLAL------------ 179
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 190 gkidsnisflsvmrkykelilnIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAINVAAYIVGAVLNQ 269
Cdd:COG2271  180 ----------------------LRFWLLALAYFLVYFALYGFLTWLPTYLVEVRGLSLAQAGLLLSLPFLAGIVGSLLGG 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 270 RFVERFGINNMLLLGLILTTLSdMSVLILYQMLEITPLLAEIMWIPSGMGIAFILGNNMTAAFSEIREPGIGSAFILFLQ 349
Cdd:COG2271  238 WLSDRLGRRRKLVLAIGLLLAA-LALLLLALLPSPALAIALLFLAGFGLGGAFGLLWALAAELFPKKARGTASGLVNTFG 316
                        330
                 ....*....|....*...
gi 612495055 350 TIFGALGIYILGCFYDGT 367
Cdd:COG2271  317 FLGGALGPLLVGYLLDAT 334
MFS_Azr1_MDR_like cd17502
Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance ...
30-374 3.36e-18

Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341045 [Multi-domain]  Cd Length: 337  Bit Score: 84.92  E-value: 3.36e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  30 LPKISDFFAvDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGA 109
Cdd:cd17502   19 LPTIVAEFG-GLSLVSWVGTAYLLTSTAFQPIYGKLSDLFGRKWVLLIAIVIFELGSLLCGLAPNMTMLIVGRAIQGIGG 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 110 GVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVLGCLfvflketiil 189
Cdd:cd17502   98 GGLMSLAFIIIADLVPPRERGKYQGYIGAVFGIASVAGPLIGGAFTDH-LSWRWCFYINLPIGGLALALL---------- 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 190 gkidSNISFLSVMrkykelilnIRFCGFALIQSftimwiwscIANLPFIFVKDMGVPVSYYGYFVAINVAAYIVGAVLNQ 269
Cdd:cd17502  167 ----RTILLSSIF---------GFLFGGALFGL---------IYYLPLYFQLVLGDSATKSGVRLLPLIIGLVIGSIISG 224
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 270 RFVERFGiNNMLLLGLILTTLSDMSVLILYQMLEITPLLAEIMWIPSGMGIAFILGNNMTAA--FSEIREPGIGSAFILF 347
Cdd:cd17502  225 ALISKTG-RYKPLIVIGTILMSVGAGLLTTLTLDTSKWLLIGYLILLGLGLGIGFQQPLVAVqnAVPPADVGVATATNTF 303
                        330       340
                 ....*....|....*....|....*..
gi 612495055 348 LQTIFGALGIYILGCFYDGTLIPVILF 374
Cdd:cd17502  304 FRSLGGTLGVAITDVFLVALALAALAF 330
MFS_LmrB_MDR_like cd17503
Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) ...
29-176 1.71e-17

Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including Bacillus subtilis lincomycin resistance protein LmrB, and several proteins from Escherichia coli such as the putative MDR transporters EmrB, MdtD, and YieQ. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341046 [Multi-domain]  Cd Length: 380  Bit Score: 83.39  E-value: 1.71e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  29 SLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFG 108
Cdd:cd17503   18 ALPTIMGDLGASLDTVQWVITSYLLALAIMIPLSGWLADRFGTRRLFLTALALFTLGSLLCGLAPNLASLIIFRILQGFG 97
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 612495055 109 AGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVL 176
Cdd:cd17503   98 GGVLIPLAQTILLRIYPPEKRGAAMGLVGLVILLAPAIGPTLGGWLTDN-LSWRWIFYINLPIGILAL 164
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
42-277 2.81e-17

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 82.66  E-value: 2.81e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  42 TIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIK 121
Cdd:cd17329   35 SIVGLVLALSAVAGIVASLIGGRLADRFGRKPVMLAGLLLRALGFALLGFAHSPWLFAIALVLTGFGGGLFEPASEAMIA 114
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 122 DMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHGYhwNVLFIIISIMAILVLGCLFVFLKETIILGKIDSNISFLsv 201
Cdd:cd17329  115 DVTTPENRTRAFSLLYWAINLGVAIGPLLGGLLLLYSF--RLLFLAAAVLFLLAALVLLFLLPETRPKRRAAEKTEIL-- 190
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 612495055 202 mRKYKELILNIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAINVAAYIVGAVLNQRFVERFGI 277
Cdd:cd17329  191 -RGYKIVLRDRAFLLFLLASFLISLIYFQLESTLPVYVVEILGLGESLLGLLLALNALLIVLLQFPVARLVERFRL 265
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
25-374 9.40e-17

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 80.93  E-value: 9.40e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  25 IYLPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFV 104
Cdd:cd06174   14 LISPLLPALLQSFGLSASQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAFAPSFWLLLLGRFL 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 105 QGFGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAH-GYHWNVLFIIISIMAILVLGCLFVFL 183
Cdd:cd06174   94 LGLGSGLIDPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILASSlGFGWRAVFLIAAALALLAAILLLLVV 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 184 KET-IILGKIDSNISFLSVMRKYKELILNIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAINVAAYI 262
Cdd:cd06174  174 PDPpESARAKNEEASSKSVLKLLKRVLKNPGLWLLLLAIFLVNLAYYSFSTLLPLFLLDLGGLSVAVAGLLLSLFGLAGA 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 263 VGAVLNQRFVERFGINNMLLLGLILTTLSDMSVLILYQMLEITPLLAEIMWIpsGMGIAFILGNNMTAAFSEIREPGIGS 342
Cdd:cd06174  254 LGSLLLGLLSDRLIGRKPLLLIGLLLMALGLALLLLAPSLLLLLLLLLLLGF--GLGGLLPLSFALIAELFPPEIRGTAF 331
                        330       340       350
                 ....*....|....*....|....*....|..
gi 612495055 343 AFILFLQTIFGALGIYILGCFYDGTLIPVILF 374
Cdd:cd06174  332 GLLNTFGFLGGAIGPLLAGFLLAATFGLTGAF 363
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
31-367 8.56e-15

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 75.30  E-value: 8.56e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  31 PKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAG 110
Cdd:COG2223   29 PPLAEEFGLSAAQLGLLFAIPVLVGALLRIPLGFLVDRFGPRRVLLIGLLLLGIGLLLLALAVSYWLLLLLGLLLGIGGG 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 111 VAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVLGCLFVFLKETIILG 190
Cdd:COG2223  109 GSFAVGIALVSKWFPPDRRGLALGLAAGGGNLGAAVAAFLAPLLIAA-FGWRNAFLILGILLLVVAVLAWLFLRDPPAGA 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 191 KIDSNISFlsvmRKYKELILNIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAINVAAYIVGAVLNQR 270
Cdd:COG2223  188 AAAAKASL----RDQLEALRDPRFWLLSLLYFGTFGSFIGFSSWLPPYLVDQFGLSAATAGLLAALFALLGALGRPLGGW 263
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 271 FVERFGINNMLLLGLILTTLSdmSVLILYQMLEITPLLAEIMWIPSGMGIAFILGNNMTAAFSEIREPGIGSAFILFLQT 350
Cdd:COG2223  264 LSDRIGGRRVLLIVFALMALG--LLLLALALGSLWLFLVLFLLLGLALGGGNGAVFALVPDIFPTKNAGAVYGLVGAAGG 341
                        330
                 ....*....|....*..
gi 612495055 351 IFGALGIYILGCFYDGT 367
Cdd:COG2223  342 LGGFLGPLLFGALLDAT 358
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
28-276 2.28e-14

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 73.76  E-value: 2.28e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  28 PSLPKISD-FFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQG 106
Cdd:cd17473   20 PALPAIAQhFVPNSELLVPLLLTLPALFIALFAPLAGWLADRFGRKRLLIAGLLLYGIGGVAGLFLDSLYALLASRALLG 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 107 FGAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAhgYHWNVLFIIISImAILVLGCLFVFLKET 186
Cdd:cd17473  100 IGVAGIMTLATALIGDYFEGEERAKMLGLQSAAMSLGGVVFLLLGGALAE--IGWRAPFLVYLL-ALPVLILVLLFLPEP 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 187 IILGKIDSNISFLSVMRKYKELILNIRFCGFALIQSFTIMwiwscIANLPFIFVKDMGVPVSYYGYFVAINVAAYIVGAV 266
Cdd:cd17473  177 ARKSKSAASPGAATAAALPWKRVLPIYFLAFLAMLLFYVI-----PIQLPFLLQERGGGSAALIGLALAIASLAGAIGAL 251
                        250
                 ....*....|
gi 612495055 267 LNQRFVERFG 276
Cdd:cd17473  252 LFGRLKRRLG 261
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
42-276 6.54e-14

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 72.63  E-value: 6.54e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  42 TIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIK 121
Cdd:cd17489   31 AVAGLVVGLFTLAALLARPFAGRLLDRFGRKRLLLIGLLIFALATLLYLLATSVALLLVLRLIHGIGWGAFTTAAATLVA 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 122 DMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHGYHWnVLFIIISIMAILVLGCLFVFLKETIILGKIDSNISFLSV 201
Cdd:cd17489  111 DIIPPSRRGEGIGYYGLATTLAMALGPALGLFLYQHLGFA-VLFIVAAVLALLALLLVFLVKDPPPVAAEEAEAGTRAFR 189
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 612495055 202 MRKYKELILnirFCGFALIQSFTIMWIWScianlpFIFVKDMGVPVSYYGYFVAINVAAYIVGAVLNQRFVERFG 276
Cdd:cd17489  190 RLVEKKVLP---PALILFLASIAYGAIST------FLPLYAAERGISNAGLFFTVYAIALLLSRPFSGKLSDRKG 255
MFS_MMR_MDR_like cd17504
Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) ...
27-361 1.23e-13

Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of putative multidrug resistance (MDR) transporters including Chlamydia trachomatis antiseptic resistance protein QacA_2, and Serratia sp. DD3 Bmr3. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341047 [Multi-domain]  Cd Length: 371  Bit Score: 71.45  E-value: 1.23e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  27 LPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQG 106
Cdd:cd17504   16 SPALPTIQREFGTSAAAVSWVLTAYLLVGAVSTPILGRLGDLYGRKKVLLIVLAIYTAGSLLAAFAPNLPVLIAGRALQG 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 107 FGAGVAGvVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVlgclfvflkeT 186
Cdd:cd17504   96 IGGAVFP-LAFALVREEFPPERVPVAQGILSATFGIGAGIGLPLGGWIVQH-LGWRWIFWTAAPVAVLL----------A 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 187 IILGKIDsnisfLSVMRKYKELILNIR--FCGFALiqsFTIMWIWSCIANLPFIFVKDMGVPVSyyGYFVAINVAAYIVG 264
Cdd:cd17504  164 ALVPLID-----LRLLRRRNVLLANITalLAGFGM---FMVFQLLPQLLQLPTPTGFGLGITEA--GLLLLPGALVMLIA 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 265 AVLNQRFVERFGINNMLLLGLILTTLSDMSVLILYQMLEITPLLAEIMWIpsGMGIAFILGNNMTAAFSEIREPGIGSAF 344
Cdd:cd17504  234 GPLAGRLIARVGPRRVLLIGLVISAVGLLLLALLHSSLWALVVALLLIGI--GLGLAFASLPNIVVESVPPDRTGIATGM 311
                        330
                 ....*....|....*..
gi 612495055 345 ILFLQTIFGALGIYILG 361
Cdd:cd17504  312 NTVLRTIGSAIGPAIAG 328
efflux_EmrB TIGR00711
drug resistance transporter, EmrB/QacA subfamily; This subfamily of drug efflux proteins, a ...
29-185 1.29e-13

drug resistance transporter, EmrB/QacA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other]


Pssm-ID: 129794 [Multi-domain]  Cd Length: 485  Bit Score: 72.03  E-value: 1.29e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055   29 SLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFG 108
Cdd:TIGR00711  24 AIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFG 103
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 612495055  109 AGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVLGCLFVFLKE 185
Cdd:TIGR00711 104 GGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN-YHWRWIFLINVPIGIIVVVVAFFILPR 179
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
28-280 2.65e-13

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 70.65  E-value: 2.65e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  28 PSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGF 107
Cdd:COG0738   29 PLIPALKDAFGLSDAQAGLLLFAFFLGYLLASLPAGRLIDRFGYKRGLLLGLLLMALGLLLFALAPSYPLLLLALFLLGL 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 108 GAGVAGVVGYAIIKDMYSGSEcAKNISIVNMAVALSPVLGPILGSAIIAHGYHWNVLFIIISIMAILVLGCLFVFLKETI 187
Cdd:COG0738  109 GLGLLDVAANPYVAALGPETA-ASRLNLLHAFFSLGALLGPLLGGLLILLGLSLSWHLPYLILAVLLLLLALLFLRSKLP 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 188 ILGKIDSNISflSVMRKYKELILNIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAINVAAYIVGAVL 267
Cdd:COG0738  188 EIEEEEEEAA--GSAASLKSLLKNPRLLLGGLAIFLYVGAEGAIGDWLPLYLKDVLGLSEATAALGLSLFWGGMTIGRFL 265
                        250
                 ....*....|...
gi 612495055 268 NQRFVERFGINNM 280
Cdd:COG0738  266 GGFLLKRFGPVRL 278
MFS_spinster_like cd17328
Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; ...
30-185 1.03e-12

Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; The protein spinster family includes Drosophila protein spinster, its vertebrate homologs, and similar proteins. Humans contain three homologs called protein spinster homologs 1 (SPNS1), 2 (SPNS2), and 3 (SPNS3). Protein spinster and its homologs may be sphingolipid transporters that play central roles in endosomes and/or lysosomes storage. SPNS2 is also called sphingosine 1-phosphate (S1P) transporter and is required for migration of myocardial precursors. S1P is a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. The spinster-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340886 [Multi-domain]  Cd Length: 405  Bit Score: 69.19  E-value: 1.03e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  30 LPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGA 109
Cdd:cd17328   22 LPDIQSDFLIDDSLAGLLQTVFIISYMVLSPIFGYLGDRYNRKWILAVGILIWSAATLLSSFAPNFWQLLLFRALVGIGE 101
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 612495055 110 GVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHGYHWNVLFIIISIMAILVLGCLFVFLKE 185
Cdd:cd17328  102 ASYSPIAPTIIADLFPKEKRTRALGVFYFAIPLGSGLGYVVGGLVAQATGGWRWAFRVTGVLGVLLAILLLLFVRE 177
MFS_SLC22 cd17317
Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major ...
43-190 6.72e-12

Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily; The Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340875 [Multi-domain]  Cd Length: 331  Bit Score: 66.06  E-value: 6.72e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  43 IAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIKD 122
Cdd:cd17317   26 LVALVQTIFFLGVLIGSLLFGYLADRFGRRPVLLLGLVLQIVCGVLSAFSPSYELFLVLRFLVGVTSAGIFTVGFVLGME 105
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 612495055 123 MYSGSECAKNISIVNMAVALSPVLGPILGSAIiahgYHWNVLFIIISIMAILVLGCLFVFLKETIILG 190
Cdd:cd17317  106 IVGPKYRSFVGILFGLFWALGYMLLALLAYLI----RDWRWLQLAISLPGLLFLLLLWWLPRRTIIVG 169
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
29-176 1.09e-11

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 65.79  E-value: 1.09e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  29 SLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFG 108
Cdd:cd17371   21 VLPALIAEFGLDEAEAGLLGTVTLAGGAIGGILGGILADRFGRVRVLVITILLFAVFTLLCGFAQNYWQLLILRALAGLG 100
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 612495055 109 AGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHGYH---WNVLFIIISIMAILVL 176
Cdd:cd17371  101 FGGEWAAGAALMAEYVPARHRGKALGYVQSGWAVGWLLATLLAALLFPLLPPeiaWRVLFLLGALPALLVL 171
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
29-188 1.30e-11

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 65.46  E-value: 1.30e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055   29 SLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFG 108
Cdd:TIGR00895  39 AAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRRRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLG 118
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  109 AGVAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVLGCLFVFLKETII 188
Cdd:TIGR00895 119 LGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV-FGWRSLFYVGGIAPLLLLLLLMRFLPESID 197
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
49-183 2.44e-11

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 64.53  E-value: 2.44e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  49 SLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIKDMYSGSE 128
Cdd:cd17365   41 SAALFGMAIGALLAGPLADRFGRKRVLLVSVALFGLFTLLTAFAQSVLQLALLRFLTGLGLGAAMPNAITLVSEYAPARR 120
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 612495055 129 CAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVLGCLFVFL 183
Cdd:cd17365  121 RSLAVTLMFCGYPLGAALGGFLAAALIPA-FGWRSVFLLGGVPPLILLPLLRGTL 174
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
46-361 1.08e-10

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 62.62  E-value: 1.08e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  46 LTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIKDMYS 125
Cdd:cd17316   40 LLFAAGFLGRPIGALLFGYLGDRIGRKKALILTLLLFGLATLLIGLLPTPILLLVLRFLQGIGIGGEYPGASTYVAEFAP 119
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 126 GSECAKNISIVNMAVALSPVLGPILGSAIIAHG---YHWNVLFIIISIMAILVlgclfvflketiilgkidsnisflsvm 202
Cdd:cd17316  120 SKRRGFALGLLQSGWALGALLAALVASLLIPLLsgdWGWRILFLIGALPALLA--------------------------- 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 203 rkykeLILNIRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAINVAAYIVGAVLNQRFVERFGINNMLL 282
Cdd:cd17316  173 -----LLLRRRTLLLILLWFFISFGYYGLTTFLPTYLQTVLGLSPATSSLYLLLISLGALVGALIAGLLSDRIGRKKTLV 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 283 LGLILTTLSDMSVLILYQMLEITPLLAEIMWIPSGMGIAFILGNNMTAAF-SEIRepGIGSAFILFLQTIFGALGIYILG 361
Cdd:cd17316  248 IGLILSGILALPLFYLLSGSPTLLLLLLFILSFFVGGVWGALYAYLAELFpTEVR--ATGVGLSYNLGRLGGGGAPPLIA 325
MFS_YajR_like cd17472
Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux ...
62-228 2.28e-10

Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli inner membrane transport protein YajR and some uncharacterized multidrug-efflux transporters. YajR is a putative proton-driven major facilitator superfamily (MFS) transporter found in many gram-negative bacteria. Unlike most MFS transporters, YajR contains a C-terminal, cytosolic YAM domain, which may play an essential role for the proper functioning of the transporter. YajR-like transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341025 [Multi-domain]  Cd Length: 371  Bit Score: 61.46  E-value: 2.28e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  62 YGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAgvVGYAIIKDMYSGSECAKNISIVNMAVA 141
Cdd:cd17472   52 FGLLSDRIGRKPVILFGLLLFIAGSLLAAYATSIYGLILGRALQGSGAISS--VVMALLADLTREENRTKAMALIGASIG 129
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 142 LSPVLGPILGsAIIAHGYHWNVLFIIISIMAILVLGCLFVFLKE-TIILGKIDSNISFLSVMRKYKELiLNIRFCGFALI 220
Cdd:cd17472  130 IAFAISMVLG-PLLAAHLGVSGLFLITAILSLVSLLILLFFVPDpPKIVQISEKEKKKLKKLLKNKRL-LRLDFSIFILH 207

                 ....*...
gi 612495055 221 QSFTIMWI 228
Cdd:cd17472  208 FVLMAFFY 215
MFS_TRI12_like cd06179
Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; ...
42-182 3.94e-10

Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; This family includes Fusarium sporotrichioides trichothecene efflux pump (TRI12), which may play a role in F. sporotrichioides self-protection against trichothecenes. TRI12 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340868 [Multi-domain]  Cd Length: 518  Bit Score: 61.49  E-value: 3.94e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  42 TIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGvVGYAIIK 121
Cdd:cd06179   32 SNSTWISTAWSLAQAVLGPIVGRLSDLFGRRWFFIGGNLLGVVGSIVAGTAKSVNMLIGGQALIGIGAGTQG-LGAAVAS 110
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 612495055 122 DMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHGYH-WNVLFIIISIMAILVLGCLFVF 182
Cdd:cd06179  111 ELVPNKYRGLVQGVVNLVASPGSALGPLIAGALVEANAAgWRWIFYINAIFNALALILLFFF 172
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
57-184 7.57e-10

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 59.90  E-value: 7.57e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  57 ISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGyAIIKDMYSGSECAKNISIV 136
Cdd:cd17330   49 LASPLWGRLSDRYGRKPVLLLSLAGSAVSYVLLGLSRNLWLLFLARFLDGLTGGNVSVAQ-AYIADITDEEERAKAFGII 127
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 612495055 137 NMAVALSPVLGPILGsAIIAHGYHWNVLFIIISIMAILVLGCLFVFLK 184
Cdd:cd17330  128 SAAFGLGFILGPALG-GFLSTPYGYALPFLVAAALALLNLVLVLFFLP 174
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
59-276 1.05e-09

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 59.55  E-value: 1.05e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  59 GLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFAND-----IIVLIIMRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNI 133
Cdd:cd06173   51 SPFAGVLADRFDRRRLLILADLLRALLAAVLALLALlgslsLWLLLVLAFLLGIASAFFGPARQALLPELVPKEQLVRAN 130
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 134 SIVNMAVALSPVLGPILGSAIIAHGyHWNVLFIIISIMAILVLGCLFvFLKETIILGKIDSNISFLSVMRKYKELILNIR 213
Cdd:cd06173  131 ALNSLATQLARIIGPALGGLLVALL-GPGGAFAINALSFLLSALLLL-FIRRPPPAAPGESSSLLLRDLREGLRYLRRSP 208
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 612495055 214 FCGFALIQSFTIMWIWS-CIANLPFIFVKDMGVPVSYYGYFVAINVAAYIVGAVLNQRFVERFG 276
Cdd:cd06173  209 LLRLLLLALALFALLGGaLTVLLPLLAKEVLGGGAAGYGLLLAAFGVGALLGALLLGRLSKRRR 272
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
33-186 1.17e-09

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 59.50  E-value: 1.17e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  33 ISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRR--PIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAG 110
Cdd:COG2271  207 LVEVRGLSLAQAGLLLSLPFLAGIVGSLLGGWLSDRLGRRrkLVLAIGLLLAALALLLLALLPSPALAIALLFLAGFGLG 286
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 612495055 111 VAGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVLGCLFVFLKET 186
Cdd:COG2271  287 GAFGLLWALAAELFPKKARGTASGLVNTFGFLGGALGPLLVGYLLDA-TGYQAAFLLLAALALLAALLALLLLRET 361
MFS_FucP_MFSD4_like cd17333
Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein ...
19-277 2.85e-09

Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins; This family is composed of bacterial L-fucose permease (FucP), eukaryotic Major facilitator superfamily domain-containing protein 4 (MFSD4) proteins, and similar proteins. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. The MFSD4 subfamily consists of two vertebrate members: MFSD4A and MFSD4B. The function of MFSD4A is unknown. MFSD4B is more commonly know as Sodium-dependent glucose transporter 1 (NaGLT1), a primary fructose transporter in rat renal brush-border membranes that also facilitates sodium-independent urea uptake. The FucP/MFSD4 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340891 [Multi-domain]  Cd Length: 372  Bit Score: 58.10  E-value: 2.85e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  19 SDISSDIYLPSLPKIsdfFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVL 98
Cdd:cd17333   11 TDALLGILGPSLEEA---FNLNVADVSVIFSSQNAGYLIGSLLAGFLMKRLGRRRTLILGLLLISLALALIFATPSIYLF 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  99 IIMRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNiSIVNMAVALSPVLGPILGSAIIAHGYHWNVLFIII-SIMAILVLG 177
Cdd:cd17333   88 VVLMFLAGLGAGILDTGANTFVGALFEESSATRL-NVLHGFFGLGALIGPLIATSLLTSELSWSWAYLIIgLIYLLLAIL 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 178 CLFVFLKETiilgkIDSNISFLSVMRKYKELILNIRFCGFALIQSFTIMWI---WSCIANLPFIFVKDMGVPVSYYGYFV 254
Cdd:cd17333  167 ILLTLFPEL-----PSARNPQQSVGAFSASASRLLRNPSIILGALALFLYVgaeTAFSSWVPSYLVEKKHVSDGLAGYLL 241
                        250       260
                 ....*....|....*....|...
gi 612495055 255 AINVAAYIVGAVLNQRFVERFGI 277
Cdd:cd17333  242 SGFWVGITIGRLLGGPISRRIKP 264
Sugar_tr pfam00083
Sugar (and other) transporter;
46-186 2.17e-08

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 55.74  E-value: 2.17e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055   46 LTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFAND---IIVLIIMRFVQGFGAGVAGVVGYAIIKD 122
Cdd:pfam00083  50 LIVSIFSVGCFIGSLFAGKLGDRFGRKKSLLIANVLFVIGAVLQGAAKGkwsVYQLIVGRVLVGIGVGGASVLAPMYISE 129
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 612495055  123 MYSGSECAKNISIVNMAVALSPVLGPI--LGSAIIAHGYHWNVLFIIISIMAILVLGCLFvFLKET 186
Cdd:pfam00083 130 IAPKKLRGALGSLYQLAITFGILLAYIfgLGLNKTSNSDGWRIPLGLQLVPALLLIIGLL-FLPES 194
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
46-361 5.41e-08

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 54.11  E-value: 5.41e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  46 LTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIKDMYS 125
Cdd:cd17319   42 LIASAFFLGYALFQVPGGWLLDRFGARKVLAVSMLLWSLFTALTGFATSLTSLYVLRFLLGVAEAGFFPGAIKALAEWFP 121
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 126 GSECAKNISIVNMAVALSPVLGPILGSAIIAHGyHWNVLFIIISIMAILVLGCLFVFLKetiilgkidsnisflsvmrky 205
Cdd:cd17319  122 ARERGRATGLFNSGAPLGAAIGPPLSGWLLLLF-GWRWAFIIEGLLGLLLAVLWWFYLR--------------------- 179
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 206 kelilniRFCGFALIQSFTIMWIWSCIANLPFIFVKDMGVPVSYYGYFVAINVAAYIVGAVLNQRFVERFGINNMLLLGL 285
Cdd:cd17319  180 -------QVWGLALGYFGINYALYGLLTWLPTYLKQARGFSLKQVGLLAAIPFLAGAIGMILGGRLSDRLLRGARRLVII 252
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 612495055 286 ILTTLSDMSVLILYQMleITPLLAEIMWIPSGMGIAFILGN--NMTAAFSEIREPGIGSAFILFLQTIFGALGIYILG 361
Cdd:cd17319  253 IGLLLAAVGLLLAYLT--TSPVVAVILLSLAGFGIGAASPVfwSLPADLLPGEAAATAGGLINSGGNLGGFVAPLLIG 328
MFS_XylE_like cd17359
D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This ...
30-115 8.82e-08

D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340917 [Multi-domain]  Cd Length: 383  Bit Score: 53.73  E-value: 8.82e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  30 LPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGA 109
Cdd:cd17359   24 LPFLQTDFNLTPFLEGLVVSSALLGAAIGALFAGRLADRFGRRKTLLISAVLFFISALGSAFSPNFTIFIIARIIGGLAV 103

                 ....*.
gi 612495055 110 GVAGVV 115
Cdd:cd17359  104 GGASAL 109
MFS_HMIT_like cd17360
H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; ...
27-112 9.00e-08

H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of myo-inositol/inositol transporters and similar transporters from vertebrates, plant, and fungi. The human protein is called H(+)-myo-inositol cotransporter/Proton myo-inositol cotransporter (HMIT), or H(+)-myo-inositol symporter, or Solute carrier family 2 member 13 (SLC2A13). HMIT is classified as a Class 3 GLUT (glucose transporter) based on sequence similarity with GLUTs, but it does not transport glucose. It specifically transports myo-inositol and is expressed predominantly in the brain, with high expression in the hippocampus, hypothalamus, cerebellum and brainstem. HMIT may be involved in regulating processes that require high levels of myo-inositol or its phosphorylated derivatives, such as membrane recycling, growth cone dynamics, and synaptic vesicle exocytosis. Arabidopsis Inositol transporter 4 (AtINT4) mediates high-affinity H+ symport of myo-inositol across the plasma membrane. The HMIT-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340918 [Multi-domain]  Cd Length: 362  Bit Score: 53.43  E-value: 9.00e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  27 LPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQG 106
Cdd:cd17360   20 LLYIKDDLGEVVLSTGWQELIVSSTVAGAAVGAAIGGWLNDRFGRRPCILLADALFTIGAIVMAAAPNKEVLIVGRVLVG 99

                 ....*.
gi 612495055 107 FGAGVA 112
Cdd:cd17360  100 LGVGIA 105
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
20-276 1.92e-07

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 52.56  E-value: 1.92e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  20 DISSDIYLPSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLI 99
Cdd:cd17478    9 DFYQGFLPALLPLLIAKLGLSYAQAGLLVSVFSITSSLLQPLFGYLADRKPRRYLLPLGPLLTGLGLSLLGFAPNYWLLL 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 100 IMRFVQGFGAGVAGVVGYAIIKdMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAH--GYHWNVLFIIISIMAILVLG 177
Cdd:cd17478   89 LLVALAGIGSAAFHPEGARLAS-QAAGGRRGLAMSIFSVGGNLGFALGPLIAAALVALfgGLGLLILLIIPGLAVALLLL 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 178 CLFVFLKETIILGKIDSNISFLSVMRKYKELILNIrfcgFALIQSFTIMwiwSCIANLPFiFVKDMGVPVSYYGYFVAIN 257
Cdd:cd17478  168 RLRPLKKPEAKKAAAKSSARSTLKGVWRALLLLLI----IVFLRSWVLS---SLTTFLPF-YLVQRGYSLVFAGLLLSLF 239
                        250
                 ....*....|....*....
gi 612495055 258 VAAYIVGAVLNQRFVERFG 276
Cdd:cd17478  240 LFAGAIGTLIGGPLSDRFG 258
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
35-183 2.00e-07

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 52.58  E-value: 2.00e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  35 DFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGV 114
Cdd:cd17325  228 ELGGLSPAQIGLLFGAQGLASALSQPPAGKLSDRIGRKPLILIGLLLSAVALLLLPLATSFWLLLLLLALLGLGLGLVFP 307
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 612495055 115 VGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVLGCLFVFL 183
Cdd:cd17325  308 ATLALLADIVPPEGRGTAMGLFNTAFSLGMVLGPLLGGFLYDA-FGFATPFLAAAALLLLAAVLFLLLR 375
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
33-184 2.88e-07

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 52.19  E-value: 2.88e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  33 ISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFA-NDIIVLIIMRFVQGFGAGV 111
Cdd:COG2223  232 LVDQFGLSAATAGLLAALFALLGALGRPLGGWLSDRIGGRRVLLIVFALMALGLLLLALAlGSLWLFLVLFLLLGLALGG 311
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 612495055 112 AGVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHGYHWNVLFIIISIMAILVLGCLFVFLK 184
Cdd:COG2223  312 GNGAVFALVPDIFPTKNAGAVYGLVGAAGGLGGFLGPLLFGALLDATGSYTAAFLVFAVLALVALVLTLLLYR 384
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
44-181 4.23e-07

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 51.94  E-value: 4.23e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055   44 AQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIKDM 123
Cdd:TIGR00898 129 VDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEF 208
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 612495055  124 YSGSECAKNISIVNMAVALSPVLGPILGSAIIahgyHWNVLFIIISIMAIL-VLGCLFV 181
Cdd:TIGR00898 209 LPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP----DWRWLQLAVSLPTFLfFLLSWFV 263
MFS_GLUT6_8_Class3_like cd17358
Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major ...
49-186 6.26e-07

Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340916 [Multi-domain]  Cd Length: 436  Bit Score: 51.04  E-value: 6.26e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  49 SLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGyaiikDMYSGSE 128
Cdd:cd17358   48 SLLTLGALIGALLSGKLADRIGRKRTLLISAIPCILGWLLIAFAKDVWMLYLGRFLAGFGGGAASVVV-----PVYIAEI 122
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 612495055 129 CAKNI-----SIVNMAVALSPVLGPILGSAIiahgyHWNVLFIIISIMAILVLGCLFvFLKET 186
Cdd:cd17358  123 APKNVrgalgSLNQLLVNIGILLGYVLGSFL-----PWRTLALIGAIPPVVFLILLF-FIPES 179
PRK03893 PRK03893
putative sialic acid transporter; Provisional
30-108 6.89e-07

putative sialic acid transporter; Provisional


Pssm-ID: 179668 [Multi-domain]  Cd Length: 496  Bit Score: 51.24  E-value: 6.89e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 612495055  30 LPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFG 108
Cdd:PRK03893  43 LTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMG 121
MFS_Amf1_MDR_like cd17476
Saccharomyces cerevisiae low affinity ammonium transporter Amf1p/YOR378W, aminotriazole ...
60-267 9.95e-07

Saccharomyces cerevisiae low affinity ammonium transporter Amf1p/YOR378W, aminotriazole resistance protein Atr1p, and similar transporters of the Major Facilitator Superfamily; Saccharomyces cerevisiae Amf1p/Ammonium Facilitator 1/YOR378W functions as a low affinity NH4+ transporter. S. cerevisiae aminotriazole resistance protein (Atr1p) is required for controlling sensitivity to aminotriazole; it is a putative component of the machinery responsible for pumping aminotriazole (and possibly other toxic compounds) out of the cell. This subfamily also includes S. cerevisiae YMR279C, a putative boron transporter involved in boron efflux and resistance, and Kluyveromyces lactis Knq1p which is involved in oxidative stress response and iron homeostasis. Amf1p, Atr1p, and YMR279C have been classified as group 1 members of the DHA2 (Drug:H+ Antiporter family 2) family, K. lactis Knq1 as group 2. This subfamily also includes two Aspergillus terreus terrein biosynthesis cluster proteins, efflux pump TerG and TerJ which may be required for efficient secretion of terrein or other secondary metabolites produced by the terrein gene cluster. The Amf1p-like subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341029 [Multi-domain]  Cd Length: 362  Bit Score: 50.34  E-value: 9.95e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  60 LLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIKDMYSGSEcAKNI--SIVN 137
Cdd:cd17476   51 LIFGRLGDIYGHKKMFVIGSFWFAIWSLIAGFSPNFIFFIICRALQGLGPAFLLPNAMALLGRTYPPGP-RKNIvfSLFG 129
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 138 MAVALSPVLGPILGSAIIAHGYHWNVLFI------IISIMAILVLGCLFVFLKETIILGKidsnISFLSVMRKYKELILN 211
Cdd:cd17476  130 ATAPLGFALGGVFGGLFAQLAWWPWIFWFlailaaIVAVAAIFWTSPSFIAVLLAVFLGW----ASFGIWVFYATQYFQN 205
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 612495055 212 IRfcGFALIQS---FTIMWIWSCIANLPFIFVKDMgVPVSyygYFVAINVAAYIVGAVL 267
Cdd:cd17476  206 VR--GYSPLLTsarFIPMAIGGVLAAITVGFLIAR-LPPS---YIMAISMVAFLVGPIL 258
MFS_GLUT_like cd17315
Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator ...
52-115 2.64e-06

Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily; This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340873 [Multi-domain]  Cd Length: 365  Bit Score: 49.11  E-value: 2.64e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 612495055  52 LVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVV 115
Cdd:cd17315   44 LLGAAIGSLFGGPLADRFGRRKSLLIAAVLYVIGALLSALAPNVWVLIVGRFLLGLGVGLASVL 107
2A0104 TIGR00881
phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, ...
57-186 4.08e-06

phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273319 [Multi-domain]  Cd Length: 379  Bit Score: 48.53  E-value: 4.08e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055   57 ISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNISIV 136
Cdd:TIGR00881  45 ISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFW 124
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 612495055  137 NMAVALSPVLGPILGSAIIAHGYHWNVLFIIISIMAILVLGCLFVFLKET 186
Cdd:TIGR00881 125 NCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDS 174
MFS_MFSD10 cd17389
Major facilitator superfamily domain-containing protein 10; Major facilitator superfamily ...
61-188 4.69e-06

Major facilitator superfamily domain-containing protein 10; Major facilitator superfamily domain-containing protein 10 (MFSD10) is also called tetracycline transporter-like protein (TETRAN). It is expressed in various human tissues, including the kidney. In cultured cells, its overexpression facilitated the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs). MFSD10/TETRAN overexpression cause resistance to some NSAIDs, suggesting that it may be an organic anion transporter that serves as an efflux pump for some NSAIDs and various other organic anions at the final excretion step. MFSD10 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340947 [Multi-domain]  Cd Length: 391  Bit Score: 48.42  E-value: 4.69e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  61 LYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGvVGYAIIKDMYSGSECAKNISIVNMAV 140
Cdd:cd17389   83 ITGAASDVYGRKPVLLLTMIGLAISYALWAVSRSFTIFLLSRIVGGISKGNVS-LSTAIVADVTSPKKRSKGMALIGVAF 161
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 612495055 141 ALSPVLGPILGsAIIA-----HGYHWNVLFIIISIM-AILVLGCLFVFLKETII 188
Cdd:cd17389  162 SLGFIIGPMIG-AYFAsftrsLGEVFFSMPALFALVlALADLLFIFFFLPETLP 214
MFS_YdiM_like cd17396
Inner membrane transport protein YdiM and similar proteins of the Major Facilitator ...
29-229 6.54e-06

Inner membrane transport protein YdiM and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily contains Escherichia coli inner membrane transport proteins YdiM and YdiN, which belong to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340954 [Multi-domain]  Cd Length: 384  Bit Score: 47.73  E-value: 6.54e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  29 SLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFG 108
Cdd:cd17396   22 NMSSLSEKWHTDVAGVAYVISGIGIGRLLTILFAGVLSDKFGRKPSVLLGMVLYALFFVGILFSPNLIIAYVFALLAGAA 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 109 AGVAGVVGYAIIKDMYSGSECAKNIsIVNMAVALSPVLGPILGSAIIAHGYHWNVLFI----IISIMAILVLGCLFVFLK 184
Cdd:cd17396  102 NSFLDTGTYPALMEAFPKASGSANI-LVKAFVSFGQFLLPFIIAFLAANNLWYGWSFIvpaaVLVLNALLLLKLSFPPQT 180
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 612495055 185 ETIILGKIDSNISFLSVMRKYKELILNIRFcGFALIQSFTIMWIW 229
Cdd:cd17396  181 VTAANTKQKEIPVKREKPKFLIEGIALILI-GFTSTATFYLFSQW 224
MFS_MdtG_MDR_like cd17391
Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the ...
42-182 7.64e-06

Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340949 [Multi-domain]  Cd Length: 380  Bit Score: 47.64  E-value: 7.64e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  42 TIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIK 121
Cdd:cd17391  240 FISGLVFSATGVSSLLSAPRLGKLGDRIGHHRILLGALLASALLYIPQAFVQTPWQLGILRFLLGLATGGLLPAINSLLA 319
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 612495055 122 DMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAH-GYHWnvLFIIISIMaiLVLGCLFVF 182
Cdd:cd17391  320 KITPKEVAGRIFGYNQSFQYLGNVAGPLLGSAIAAHfGYRA--VFVVTALL--VLLNAIWSF 377
TRI12 pfam06609
Fungal trichothecene efflux pump (TRI12); This family consists of several fungal specific ...
49-176 8.62e-06

Fungal trichothecene efflux pump (TRI12); This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster.It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes.


Pssm-ID: 115279 [Multi-domain]  Cd Length: 598  Bit Score: 47.74  E-value: 8.62e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055   49 SLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGvVGYAIIKDMYSGSE 128
Cdd:pfam06609  85 TLWTMGQAVSILMMGRLTDRFGRRPFVIATHIIGLVGAIVGCTANKFNTLLAAMTLLGVAAGPAG-ASPLFIGELMSNKT 163
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 612495055  129 CAKNISIVNMAVALSPVLGPILGSAIIAHGyHWNVLF---IIISIMAILVL 176
Cdd:pfam06609 164 KFLGLLIVSAPTIAMNGAGPYFGQRLAIQG-NWRWIFyiyIIMSAIAVLLI 213
MFS_OAT cd17374
Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion ...
45-190 9.80e-06

Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion transporters (OATs) generally display broad substrate specificity and they facilitate the exchange of extracellular with intracellular organic anions (OAs). Several OATs have been characterized including OAT1-10 and urate anion exchanger 1 (URAT1, also called SLC22A12). Many OATs occur in renal proximal tubules, the site of active drug secretion. OATs mediate the absorption, distribution, and excretion of a diverse array of environmental toxins, and clinically important drugs, including anti-HIV therapeutics, anti-tumor drugs, antibiotics, anti-hypertensives, and anti-inflammatories, and therefore is critical for the survival of the mammalian species. OAT falls into the SLC22 (solute carrier 22) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340932 [Multi-domain]  Cd Length: 341  Bit Score: 47.29  E-value: 9.80e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  45 QLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFgaGVAGVVGYAIIKDM- 123
Cdd:cd17374   38 SVAQSIFMAGLLVGALIFGHLSDRFGRKFILLLSLLQLAIFGTCAAFAPTFPVYCVLRFLAGF--AVSGISINTLILGTe 115
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 612495055 124 -YSGSECAKNISIVNMAVALSPVLGPILGSAIiahgYHWNVLFIIISIMAILVLGCLFVFLKETIILG 190
Cdd:cd17374  116 wTTPRHRALAITLTSCFFSIGQMLLAGLAYAI----RDWRLLQLVVSVPFFLFFLYSWWLPKRTLILS 179
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
28-186 1.38e-05

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 46.79  E-value: 1.38e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  28 PSLPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGF 107
Cdd:COG2807   39 PLLPEIRADLGLSATQAGLLTTLPLLAFGLFAPLAPRLARRFGLERTLLLALLLLAAGLLLRSLAPSVALLLAGTALIGA 118
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 612495055 108 GAGVAGVVGYAIIKdMYSGSECAKNISIVNMAVALSPVLGPILgSAIIAHGYHWNVLFIIISIMAILVLGCLFVFLKET 186
Cdd:COG2807  119 GIAVGNVLLPGLIK-RWFPDRVGLMTGLYTAAMGLGAALAAGL-TVPLAAALGWRGALAVWALLALLALLLWLPLLRRR 195
MFS_MT3072_like cd17475
Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar ...
54-185 2.47e-05

Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar transporters of the Major Facilitator Superfamily; This family includes the Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341028 [Multi-domain]  Cd Length: 378  Bit Score: 46.08  E-value: 2.47e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  54 GISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNI 133
Cdd:cd17475   43 GVAVSMLPAGWLLDRFGERRVLAVGLLLMGAAALLMALVGSYPVLLVLLFLVGAGYGSVQPGGGRAIMRWFPPRERGLAM 122
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 612495055 134 SIVNMAVAlspvLGPILGSAI---IAHGYHWNVLFIIISIMAILVLGCLFVFLKE 185
Cdd:cd17475  123 GIRQTGVP----LGGALAAALlppLALHYGWRAAFVVAGLVSILAAVLFWLFYRE 173
MFS_SLC22A1_2_3 cd17379
Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, ...
49-189 4.94e-05

Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, and 3) of the Major Facilitator Superfamily of transporters; This sufamily includes solute carrier family 22 member 1 (SLC22A1, also called organic cation transporter 1 or OCT1), SLC22A2 (or OCT2), SLC22A3 (or OCT3), and similar proteins. OCT1-3 have similar basic functional properties: they are able to translocate a variety of structurally different organic cations in both directions across the plasma membrane; to translocate organic cations independently from sodium, chloride or proton gradients; and to function as electrogenic uniporters for cations or as electroneutral cation exchangers. They show overlapping but distinct substrate and inhibitor specificities, and different tissue expression pattern. In humans, OCT1 is strongly expressed in the liver, OCT2 is highly expressed in the kidney where it is localized at the basolateral membrane of renal proximal tubules, and OCT3 is most strongly expressed in skeletal muscle. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. The SLC22A1-3 subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340937 [Multi-domain]  Cd Length: 340  Bit Score: 45.03  E-value: 4.94e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  49 SLNLvGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIKDMYsGSE 128
Cdd:cd17379   41 SLNL-GFLIGSIVIGYLADRFGRKVCFLISILGNGVSGVLMAFSPNYPWFLIFRFLQGLFGKGGWMTGYVLVTEFV-GSK 118
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 612495055 129 CAKNISIV-NMAVALSPVLGPILGSAIiahgYHWNVLFIIISIMAILVLGCLFVFLKETIIL 189
Cdd:cd17379  119 YRRTVGIVyQMFFTLGLLILPGIAYFI----PHWRWLQLAVTLPNFLFLLYYWFIPKHTFIL 176
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
53-182 5.36e-05

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 44.91  E-value: 5.36e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  53 VGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIKDMYSGSECAKN 132
Cdd:cd06173  255 VGALLGALLLGRLSKRRRRGRLLLIGALLLGLALLVLGLSPSLWLLLAALFLLGLAGGLFNVPLNTLLQLRVPDELRGRV 334
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 612495055 133 ISIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVLGCLFVF 182
Cdd:cd06173  335 FSVYNALNSGAMPLGALLAGLLADA-LGLSAVFLLAGALLLLAALLLLLL 383
MFS_Set cd17471
Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; ...
46-280 9.41e-05

Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; This family is composed of sugar transporters such as Escherichia coli Sugar efflux transporter SetA, SetB, SetC and other sugar transporters. SetA, SetB, and SetC are involved in the efflux of sugars such as lactose, glucose, IPTG, and substituted glucosides or galactosides. They may be involved in the detoxification of non-metabolizable sugar analogs. The Set family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341024 [Multi-domain]  Cd Length: 371  Bit Score: 44.08  E-value: 9.41e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  46 LTISLNLVGISISGLLY----GPLSD-YYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFV-QGFG-AGVAGVVGYA 118
Cdd:cd17471   32 LQIGIFMTLSALSGIVVsqwlGRLSDrGGDRKPLILLALLAGALGYLLFAFLRNYWVLLLVGVVlLSLGaAAFPQLFALA 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 119 -IIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAH-GYHWNVLFIIISIMAILVLgCLFVFLKETIILGKIDSNI 196
Cdd:cd17471  112 rEYADRSSGRDATLFNSVLRAAFSLAWVIGPPLAFLLLDVlGFTGLFLLAALLYLVVALL-VLFLLPSVKPPAQKATPAS 190
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 197 SFLSVMRKykeliLNIRFCGFALIQSFTIMWIWscIANLPFIFVKDMGVPVSYYGYFVAINVAAYIVGAVLNQRFVERFG 276
Cdd:cd17471  191 SLVKAPVN-----RRLLLLFAAFTLLFAANSMY--IIAMPLYVTNELGGSESWVGLLFGLAAALEIPIMLLAGLLAKRFG 263

                 ....
gi 612495055 277 INNM 280
Cdd:cd17471  264 KRRL 267
MFS_TetA cd17388
Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily ...
63-186 1.48e-04

Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340946 [Multi-domain]  Cd Length: 385  Bit Score: 43.78  E-value: 1.48e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  63 GPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFgAGVAGVVGYAIIKDMYSGSECAKNISIVNMAVAL 142
Cdd:cd17388   59 GALSDRFGRRPVLLLSLAGAALDYLLMAFAPTLWWLYLGRIIAGI-TGATGAVAAAYIADVTPPEQRARNFGLLGAAFGL 137
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 612495055 143 SPVLGPILGSAIIAHGYHWNVLFIIISIMAILVLGCLfvFLKET 186
Cdd:cd17388  138 GFIAGPALGGLLGEISPRAPFLVAAGLNGLNFLLGLF--VLPES 179
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
52-176 1.58e-04

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 43.34  E-value: 1.58e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  52 LVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIKDMYSGSECAK 131
Cdd:cd17330  221 IAGILAQLLLIPRLAKRLGERKLLRLGLLLAIIGLLLLPFASSVPLLVLAAAILAFGTGIVFPALSALLSKSVPSKEQGK 300
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 612495055 132 NISIVNMAVALSPVLGPILGSAIIAHGYHWNVLFIIISIMAILVL 176
Cdd:cd17330  301 AQGIIQSLQSLARIIGPLLAGPLYSFLGPGVPFLLAAGLLLIALF 345
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
71-361 1.62e-04

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 43.74  E-value: 1.62e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  71 RRPIMLLGVGIFMLASIACCFAND------IIVLIIMRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNIS-----IVNMA 139
Cdd:COG2211   80 RRPWILIGAIPLALSFVLLFTAPDlsptgkLIYALVTYLLLGLAYTLVNIPYSALGAELTPDYEERTRLSswrfaFAGLG 159
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 140 VALSPVLGPILGSAI---IAHGYHWnvLFIIISIMAILVLGCLFVFLKETIILGKIDSNI-SFLSVMRKYKELIlniRFC 215
Cdd:COG2211  160 GLLASVLPPPLVAAFggdAALGYRL--TALIFAVLGLLAFLLTFFGTKERPVPEEEKVSLkESLKALLKNRPFL---LLL 234
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 216 GFALIQSFTIMWIWsciANLPFIFVKDMGVPVSYYGYFVAINVAAYIVGAVLNQRFVERFGINNMLLLGLILTTLSdMSV 295
Cdd:COG2211  235 LAYLLFFLALALVA---ALLLYYFKYVLGLSAALVGLLLALYFLAALLGAPLWPRLAKRFGKKKAFIIGLLLAALG-LLL 310
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 612495055 296 LILYQMLEITPLLAEIMWIPSGMGIAFILGNNMTA-------AFSEIREPGIGSAFILFLQTIFGALGIYILG 361
Cdd:COG2211  311 LFFLGPGNLWLLLVLAALAGIGLGAILVLPWAMLAdvvdydeWKTGRRREGLYFGIFTFAIKLGQALAGALAG 383
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
53-176 1.67e-04

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 43.32  E-value: 1.67e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  53 VGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIKDMYSGSECAKN 132
Cdd:cd17477   42 LGILLGSPLVPRLIRRVGHIRAFAAGAAITAVSVLLLALTDSPWVWFLLRFVMGIGLAGLFVVSESWLNALATNENRGRV 121
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 612495055 133 ISIVNMAVALSPVLGPILGSAIIAHGYHWNVLFIIISIMAILVL 176
Cdd:cd17477  122 LGLYSTVLGLGFALGPLLLALVGTAGALPFLIAAVLLLLALVPL 165
MFS_MFSD9 cd17390
Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily ...
57-185 2.18e-04

Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily domain-containing protein 9 (MFSD9) is expressed in the central nervous system (CNS) and in most peripheral tissues but at very low expression levels. The function of MFSD9 is unknown. MFSD9 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340948 [Multi-domain]  Cd Length: 350  Bit Score: 42.98  E-value: 2.18e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  57 ISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQG-FGAGVAgvVGYAIIKDMYSGSECAKNISI 135
Cdd:cd17390   46 FSSPLVGSWSDVVGRRPVLLICLLLTALGYVLLGFSTSLALLFLSRIPLGiFKHTQS--LCKAYLSDLVSEQERSRVLGR 123
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 612495055 136 VNMAVALSPVLGPILGSAIIAHGYHWNVLFIIISIMAILVLGCLFVFLKE 185
Cdd:cd17390  124 FNAASSLGFILGPVVGGHLAETDGGFYYVALLCSAIFILNAGLVWFLLSK 173
MFS_SLC22A15 cd17377
Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; ...
49-189 5.94e-04

Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 15 (SLC22A15) is also called fly-like putative transporter 1 (FLIPT1). It is expressed at the highest levels in the kidney and brain. It is a member of the SLC22 family of transporters, which includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A15 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340935 [Multi-domain]  Cd Length: 353  Bit Score: 41.69  E-value: 5.94e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  49 SLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIKDMYSGSE 128
Cdd:cd17377   46 SFFFAGVLIGVVSFGQLSDRFGRKPVYLTGLALDILFAYFNALAPSYEFFAVSRFLVGVMNGGMSLVAFVLLNECVGKSY 125
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 612495055 129 CAKNISIVNMAVALSPVLGPILGSAIiahgYHWNVLFIIISIMAILVLGCLFVFLKETIIL 189
Cdd:cd17377  126 WALAGSLGGLFFAVGIAQYALLGYFI----RSWRTLAVVVNLQGTLVFLLSLFIPGRTLIL 182
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
57-181 7.12e-04

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 41.40  E-value: 7.12e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  57 ISGLLYGPLSDYY--GRRPIMLLGVGIFMLASIACC-FANDIIVLIIMRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNI 133
Cdd:cd17319  230 IGMILGGRLSDRLlrGARRLVIIIGLLLAAVGLLLAyLTTSPVVAVILLSLAGFGIGAASPVFWSLPADLLPGEAAATAG 309
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 612495055 134 SIVNMAVALSPVLGPILGSAIIAHGYHWNVLFIIISIMAILVLGCLFV 181
Cdd:cd17319  310 GLINSGGNLGGFVAPLLIGYLVDATGSYTAAFLFLAAVALLAALLVLL 357
MFS_STP cd17361
Plant Sugar transport protein subfamily of the Major Facilitator Superfamily of transporters; ...
45-112 8.14e-04

Plant Sugar transport protein subfamily of the Major Facilitator Superfamily of transporters; The plant Sugar transport protein (STP) subfamily includes STP1-STP14; they are also called hexose transporters. They mediate the active uptake of hexoses such as glucose, 3-O-methylglucose, fructose, xylose, mannose, galactose, fucose, 2-deoxyglucose and arabinose, by sugar/hydrogen symport. Several STP family transporters are expressed in a tissue-specific manner, or at specific developmental stages. STP1 is the member with the highest expression level of all members and high expression is detected in photosynthetic tissues, such as leaves and stems, while roots, siliques, and flowers show lower expression levels. It plays a major role in the uptake and response of Arabidopsis seeds and seedlings to sugars. The STP subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340919 [Multi-domain]  Cd Length: 390  Bit Score: 41.47  E-value: 8.14e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 612495055  45 QLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVA 112
Cdd:cd17361   54 QLFTSSLYLAGLVASLLASYVTRKWGRKPSMLIGGVLFLVGAALNAAAQNIAMLIVGRILLGFGVGFG 121
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
56-264 9.11e-04

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 40.99  E-value: 9.11e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  56 SISGLLYGPLSDYYGRR-PIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNIS 134
Cdd:cd17370   48 SLLRLFSGYLSDRTGKRkPLVILGYGLSALAKPLLALAGSWQLVLLLRILERLGKGIRTPPRDALLADATPPSGRGKAFG 127
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 135 IVNMAVALSPVLGPILGSAIIA-HGYHWNVLFIIISIMAILVLGCLFVFLKETIILGKIDSNISFLSVMRKYKELILNIR 213
Cdd:cd17370  128 LHRALDTLGAVLGPLLAALLLYlLGGNYRTIFLLAAIPALLALLILLFVVKEYPRPPKLRKKSKKTSLKKLPKAFWLYLL 207
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 612495055 214 FCGFALIQSFTIMWIWSCIANLpfiFVKDMGVPVSYYGYFVAINVAAYIVG 264
Cdd:cd17370  208 AVALFALGNFSFAFLILRAQEL---GLSAALIPLLYALFNLVYALAAYPAG 255
PRK03699 PRK03699
putative transporter; Provisional
33-280 1.04e-03

putative transporter; Provisional


Pssm-ID: 235151 [Multi-domain]  Cd Length: 394  Bit Score: 41.07  E-value: 1.04e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  33 ISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVA 112
Cdd:PRK03699  33 IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGIT 112
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 113 GVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHGYHWNVLFIIISIMAILVLgcLFVFLKETIILGKI 192
Cdd:PRK03699 113 MSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIF--ILTLFSEFPALGKH 190
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 193 DSNISFLSVMRKYKELILNIRFCGFALIQSFTIMWIWScianlPFIFVKDMGVPVSYYGYFVAINVAAYIVGAVLNQRFV 272
Cdd:PRK03699 191 APKADKPVAKEKWGIGVLFLAIAALLYILAQLTFISWV-----PEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIV 265

                 ....*...
gi 612495055 273 ERFGINNM 280
Cdd:PRK03699 266 RFFDLQRI 273
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
56-180 1.12e-03

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 40.60  E-value: 1.12e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  56 SISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNISI 135
Cdd:cd17370  248 ALAAYPAGRLSDRIGRKKLLILGYLSLALAYLGFALGSSLWLLLLGFILWGLYMGAQESIERAAVADLVPAELRGTAYGL 327
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 612495055 136 VNMAVALSPVLGPILgSAIIAHGYHWNVLFIIISIMAILVLGCLF 180
Cdd:cd17370  328 FNTVVGIGWLLASLI-AGYLWDLISPSAAFLFSAVLALIALLLLL 371
MFS_OFA_like cd17353
Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of ...
35-182 1.40e-03

Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Oxalobacter formigenes oxalate:formate antiporter (OFA or OxlT) and similar proteins. O. formigenes, a commensal found in the gut of animals and humans, plays an important role in clearing dietary oxalate from the intestinal tract, which is carried out by OFA/OxlT, an anion transporter that facilitates the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation. This exchange generates an electrochemical proton gradient and is the source of energy for ATP synthesis in this cell. The OFA-like subfamily belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340911 [Multi-domain]  Cd Length: 389  Bit Score: 40.67  E-value: 1.40e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  35 DFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIM--LLGVGIFMLASIACcFANDIIVLIIMRFVQGFGAGVA 112
Cdd:cd17353  242 EFAGLDAGIAALAVSILSIFNGGGRPFWGWLSDKIGRKNTLsiAFLIQGVAMFLLPF-IGSVAVLFVLGVALIGFCYGGG 320
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 113 GVVGYAIIKDMYSGSECAKNISIVNMAVALSPVLGPILgSAIIAHGYHWNVLFIIISIMAILVLGCLFVF 182
Cdd:cd17353  321 FALFPALTADFFGTKNAGTNYGLLYTAKGVGGLIGPII-AAYVLYTGGYNAAFIIAAALSLVALALALLL 389
MFS_SLC22A7_OAT2 cd17447
Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major ...
45-108 1.96e-03

Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 7 (SLC22A7), also called organic anion transporter 2 (OAT2) mediates sodium-independent transport of a variety of organic anions including prostaglandin E2, prostaglandin F2, tetracycline, bumetanide, estrone sulfate, glutarate, dehydroepiandrosterone sulfate, allopurinol, 5-fluorouracil, paclitaxel, L-ascorbic acid, salicylate, ethotrexate, and alpha-ketoglutarate. It also plays a role in renal uric acid uptake from blood as a first step of tubular secretion. OAT2 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS)of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341005 [Multi-domain]  Cd Length: 341  Bit Score: 40.10  E-value: 1.96e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 612495055  45 QLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFG 108
Cdd:cd17447   38 QATATFFFAGVTMGAVAFGYLSDRFGRKRMLLVAYVLSLVFGLASAFSVSYVMFAITRTLTGFA 101
MFS_SLC46 cd17386
Solute carrier 46 (SLC46) family of the Major Facilitator Superfamily of transporters; The ...
36-183 2.00e-03

Solute carrier 46 (SLC46) family of the Major Facilitator Superfamily of transporters; The solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3) and similar proteins from insects and nematodes. The best-studied member is SLC46A1, also called proton-coupled folate transporter (PCFT), which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. SLC46A2, also called thymic stromal cotransporter protein (TSCOT), is a putative 12-transmembrane protein mainly expressed in the thymic cortex in a specific thymic epithelial cell (TEC) subpopulation. SLC46A3 is a lysosomal membrane protein that functions as a direct transporter of noncleavable antibody maytansine-based catabolites from the lysosome to the cytoplasm. The SLC46 family belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340944 [Multi-domain]  Cd Length: 360  Bit Score: 39.95  E-value: 2.00e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  36 FFAVDYTIAQLTISLNLVGIsISGLLYGPLSDYYGRRPIMLLGV-----GIFMLASIACCF-ANDIIVLIIMRFVQG-FG 108
Cdd:cd17386   25 FVYAANFYLYMNLMGSIPPL-FSSLFLGSWSDRYGRKPPLLMSLvglllSSLILVLIVYFTtVPSVWWFYLSAIPLAlFG 103
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 612495055 109 AGVAGVVG-YAIIKDMYSGSECAKNISIVNMAVALSPVLGPILGSAIIAHGYHWNVLFIIISIMAI-LVLGCLFVFL 183
Cdd:cd17386  104 GFTAFLSAsFAYISDISSEKKRTYRMAILEVALGLGGFLGSLLSGHLFKALGYAWSFSISAALLLIaLLYILFFLTL 180
MFS_3 pfam05977
Transmembrane secretion effector; This is a family of transport proteins. Members of this ...
60-278 2.59e-03

Transmembrane secretion effector; This is a family of transport proteins. Members of this family include a protein responsible for the secretion of the ferric chelator, enterobactin, and a protein involved in antibiotic resistance.


Pssm-ID: 399164 [Multi-domain]  Cd Length: 523  Bit Score: 39.73  E-value: 2.59e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055   60 LLYGPLSDYYGRRPIMLLGVGIFMLASI---ACCFAN--DIIVLIIMRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNIS 134
Cdd:pfam05977  63 IPAGALADNFDRRKIMLAGQLLLALVSTlltLLAGLGllSPWLLLGLTFLGGIGTALMDPAWQASVPELVPRRDLPAAVA 142
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  135 IVNMAVALSPVLGPILGSAIIAH-GYHWNVLFIIISIMAilVLGCLF---------VFLKETIiLGKIDSNISFLSVMRK 204
Cdd:pfam05977 143 LNSVGYNIARSVGPALGGVLLAAfGPAFTFALNALSYFA--VIAALWrwkraapasPLPRERI-FGAVRAGLRFTAMSRE 219
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 612495055  205 YKELILNirfcGFALIQSFTIMWiwsciANLPFIFVKDMGVPVSYYGYFVAINVAAYIVGAVLNQRFVERFGIN 278
Cdd:pfam05977 220 LRSVLVR----AFAFGLSASAVW-----ALLPLVARDLLDGDAIFYGILLGAVGVGAILGALSLPRLRERLGSD 284
MFS_SLC37A4 cd17343
Solute carrier family 37 member 4 of the Major Facilitator Superfamily of transporters; Solute ...
56-185 2.81e-03

Solute carrier family 37 member 4 of the Major Facilitator Superfamily of transporters; Solute carrier family 37 member 4 (SLC37A4), one of four SLC37 family proteins in vertebrates, is better known as glucose-6-phosphate transporter (G6PT). It is also called sugar phosphate exchanger 4 (SPX4), G6P translocase, or transformation-related gene 19 protein (TRG-19). G6PT is a phosphate (Pi)-linked G6P antiporter, catalyzing G6P:Pi and Pi:Pi exchanges. Deficiencies in human G6PT lead to glycogen storage disease type Ib (GSD-Ib), which is a metabolic and immune disorder. G6PT is a member of the Organophosphate:Pi antiporter (OPA)/SLC37 family, whose members are integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The OPA/SLC37 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340901 [Multi-domain]  Cd Length: 409  Bit Score: 39.63  E-value: 2.81e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  56 SISGLLYGPLSDYYgrRPIMLLGVGIFMLASIACCFA--NDIIVLIIMRFVQGFGAGVAGVVGYAIIKDMYSGSECAKNI 133
Cdd:cd17343   52 AISKFIGGVLSDQI--SARWLFSSGLVLSGLTTVAFSgsSSVWVFSILWFLNGLAQGLGWPPCAKILRKWFSPSQFGTWW 129
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 612495055 134 SIVNMAVALSPVLGPILGSAIIAHgYHWNVLFIIISIMAILVLGCLFVFLKE 185
Cdd:cd17343  130 SVLSTSMNLAGSLGPILATLLALS-YGWRSTLSISGTVAVVMSVVCLLFIKN 180
MFS_PLT cd17437
Plant Polyol transporter family of the Major Facilitator Superfamily of transporters; The ...
40-112 3.46e-03

Plant Polyol transporter family of the Major Facilitator Superfamily of transporters; The plant Polyol transporter (PLT) subfamily includes PLT1-6 from Arabidopsis thaliana and similar transporters. The best characterized member of the group is Polyol transporter 5, also called Sugar-proton symporter PLT5, which mediates the H+-symport of numerous substrates including linear polyols (such as sorbitol, xylitol, erythritol or glycerol), cyclic polyol myo-inositol, and different hexoses, pentoses (including ribose), tetroses, and sugar alcohols. It functions to transport a wide range of substrates into specific sink tissues in the plant. The PLT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340995 [Multi-domain]  Cd Length: 387  Bit Score: 39.31  E-value: 3.46e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 612495055  40 DYTIAQLTISLNLVGIsISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVA 112
Cdd:cd17437   31 DVQEEVLIGSLNIISL-VGSLAAGRTSDWIGRRYTIALAALIFFVGALLMGVAPNYPVLMVGRFVAGIGVGFA 102
MFS_GLUT_Class1_2_like cd17357
Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This ...
46-186 3.74e-03

Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This subfamily includes Class 1 and Class 2 glucose transporters (GLUTs) including Solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1, also called glucose transporter type 1 or GLUT1), SLC2A2-5 (GLUT2-5), SLC2A7 (GLUT7), SLC2A9 (GLUT9), SLC2A11 (GLUT11), SLC2A14 (GLUT14), and similar proteins. GLUTs are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-5 are the most thoroughly studied and are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340915 [Multi-domain]  Cd Length: 447  Bit Score: 39.17  E-value: 3.74e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  46 LTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASI---ACCFANDIIVLIIMRFVQGFGAGVAgvvgYAIIKd 122
Cdd:cd17357   53 LIVSIFFIGGAIGSFISAFLANRFGRKNGLLISNALLVVSSLlmfLSKSAKSPELLIFGRFLVGIACGLS----TGFVP- 127
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 123 MY----SGSECAKNISIVN-MAVALSPVLGPILG-SAIIAHGYHWNVLFIIISIMAILVLgCLFVFLKET 186
Cdd:cd17357  128 MYlqeiSPSELRGALGSLTqIGVTLGILLGQVFGlPSVLGTETLWPYLLFFPGIPALLQL-AALPFFPES 196
MFS_SLC45_SUC cd17313
Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily ...
56-180 4.21e-03

Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters; This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340871 [Multi-domain]  Cd Length: 421  Bit Score: 39.15  E-value: 4.21e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  56 SISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIKDMYSGSE--CAKNI 133
Cdd:cd17313  295 LIFSLPIGKLGKKIGRKKVYLIGLVLFAVGMALMALVHNVTVALVLFALGGIGWATININPYPLVSDYHSESGrgQGTDT 374
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 612495055 134 SIVNMAVALSPVLGPILGSAIIAHGYHWNVLFIIISIMAILVLGCLF 180
Cdd:cd17313  375 GLLNLAISLAQILVSLLAGPIIDVKGYGTVFPVAAVASFLSLVGALF 421
MFS_ShiA_like cd17369
Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This ...
33-181 4.44e-03

Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340927 [Multi-domain]  Cd Length: 408  Bit Score: 39.05  E-value: 4.44e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  33 ISDFFAVDYTIAQL----TISLNLVGIS-----ISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDI--IVLIIM 101
Cdd:cd17369  246 LFTTFALSYATQTLgvdrSTVLLAVLIAsvvaaITIPLFGWLSDRVGRRPVYLAGALLAALFAFPFFWLLDTgsTWLIVL 325
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 102 RFVQGFGAGVAGVVGY--AIIKDM------YSGSECAKNIsivnmAVALSPVLGPILGSAIIAHGYHWNVLFIIISIMAI 173
Cdd:cd17369  326 AAVVVLGVLHGMMYGPqaAFLAELfptrvrYTGASLGYQL-----GAILGGGFAPLIATALVAATGSWWPVALYLAALAV 400

                 ....*...
gi 612495055 174 LVLGCLFV 181
Cdd:cd17369  401 ISLVAALF 408
PRK11551 PRK11551
putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
54-186 7.04e-03

putative 3-hydroxyphenylpropionic transporter MhpT; Provisional


Pssm-ID: 236927 [Multi-domain]  Cd Length: 406  Bit Score: 38.40  E-value: 7.04e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  54 GISISGLLYGP-----LSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIKDMYSGSE 128
Cdd:PRK11551  57 SAGILGLLPGAllggrLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL 136
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 612495055 129 CAKNISIVNMAVALSPVLGPILGSAIIAHGyHWNVLFIIISIMAILVLGCLFVFLKET 186
Cdd:PRK11551 137 RGTAVSLMYCGVPFGGALASVIGVLAAGDA-AWRHIFYVGGVGPLLLVPLLMRWLPES 193
MFS_SLC18A1_2_VAT1_2 cd17384
Vesicular amine transporters 1 (VAT1) and 2 (VAT2), and similar transporters of the Major ...
61-184 7.80e-03

Vesicular amine transporters 1 (VAT1) and 2 (VAT2), and similar transporters of the Major Facilitator Superfamily; Vesicular amine transporter 1 (VAT1 or VMAT1) is also called solute carrier family 18 member 1 (SLC18A1) or chromaffin granule amine transporter, while VAT2 (or VMAT2) is also called SLC18A2, synaptic vesicular amine transporter, or monoamine transporter. VATs (or VMATs) are responsible for the uptake of cytosolic monoamines into synaptic vesicles in monoaminergic neurons. VAT1 and VAT2 distinct pharmacological properties and tissue distributions. VAT1 is preferentially expressed in neuroendocrine cells and endocrine cells, where it transports biogenic monoamines, such as serotonin, from the cytoplasm into the secretory vesicles. VAT2 is primarily expressed in the CNS and is involved in the ATP-dependent vesicular transport of biogenic amine neurotransmitters including dopamine, norepinephrine, serotonin, and histamine into synaptic vesicles. VATs belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340942 [Multi-domain]  Cd Length: 373  Bit Score: 38.32  E-value: 7.80e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  61 LYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGV---AGVVGYAIIKDMYSGSECAKNISIVN 137
Cdd:cd17384  249 LFGPLAHKIGRWLCSLLGMLLVGISLILIPLAKNIYGLIIPHFGLGLGIGMvdsSMMPLLAYLVDLRHSSVYGSVYAIAD 328
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 612495055 138 MAVALSPVLGPILGSAII-AHGYHWnvLFIIISIMAILVlGCLFVFLK 184
Cdd:cd17384  329 VAFCLAFALGPSLGGAIVkSIGFPW--LMRIIGIINILY-APLLFFLR 373
MFS_OCT_plant cd17378
Plant organic cation/carnitine transporters of the Major Facilitator Superfamily of ...
43-189 7.84e-03

Plant organic cation/carnitine transporters of the Major Facilitator Superfamily of transporters; Plant organic cation/carnitine transporters (OCTs) are sequence-similar to their animal counterparts, which are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. Little is know about plant OCTs. In Arabidopsis, there are six genes belonging to this family that show distinct, organ-specific expression pattern of the individual genes. AtOCT1 has been found to affect root development and carnitine-related responses in Arabidopsis. AtOCT4, 5 and 6 are up-regulated during drought stress, AtOCT3 and 5 during cold stress and AtOCT5 and 6 during salt stress treatments. Plant OCTs belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340936 [Multi-domain]  Cd Length: 342  Bit Score: 38.11  E-value: 7.84e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  43 IAQLTISLNLVGISISGLLYGPLSD-YYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIK 121
Cdd:cd17378   34 LVGLPQSSFFVGCLIGSGVLGHLADsSLGRKNLLFLSCLLMALSGIATAFSPNYWVYAFLRFLTGFGRSGIGTCALVLAT 113
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 122 DMYSgsecAKNISIVNMAVALSPVLGpILGSAIIAH--GYHWNVLFIIISIMAILVLGCLFVFLKETIIL 189
Cdd:cd17378  114 EPVG----PKWRGQVGMSTFFFFVLG-FMSLPGIAYlnGSSWRVLYFWTSIPALIYCILVYLFARRLLAV 178
PRK14995 PRK14995
SmvA family efflux MFS transporter;
63-167 8.36e-03

SmvA family efflux MFS transporter;


Pssm-ID: 184957 [Multi-domain]  Cd Length: 495  Bit Score: 38.17  E-value: 8.36e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  63 GPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLIIMRFVQGFGAGVAGVVGYAIIKDMYSgSECAKNISI-VNMAV- 140
Cdd:PRK14995  62 GALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFT-EEKQRNMALgVWAAVg 140
                         90       100
                 ....*....|....*....|....*..
gi 612495055 141 ALSPVLGPILGSAIIAHgYHWNVLFII 167
Cdd:PRK14995 141 SGGAAFGPLVGGILLEH-FYWGSVFLI 166
MFS_OFA_like cd17353
Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of ...
30-182 8.40e-03

Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Oxalobacter formigenes oxalate:formate antiporter (OFA or OxlT) and similar proteins. O. formigenes, a commensal found in the gut of animals and humans, plays an important role in clearing dietary oxalate from the intestinal tract, which is carried out by OFA/OxlT, an anion transporter that facilitates the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation. This exchange generates an electrochemical proton gradient and is the source of energy for ATP synthesis in this cell. The OFA-like subfamily belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340911 [Multi-domain]  Cd Length: 389  Bit Score: 37.97  E-value: 8.40e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055  30 LPKISDFFAVDYTIAQLTISLNLVGISISGLLYGPLSDYYGRRPIMLLGVGIFMLASIACCFANDIIVLII-MRFVQGFG 108
Cdd:cd17353   26 NPPLSSALGWSLASVALAFTLTIVFLAISAPFAGRLVDRGGPRKAILIGGILFGLGFILSAFAISLPLLFLgYGVLGGIG 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612495055 109 AGVA--GVVGYAI-----IKDMYSGsecaknisIVNMAVALSPVLGPILGSAIIAHGYHWNVLFIIISIMAILVLGCLFV 181
Cdd:cd17353  106 AGIGyiTPVSTAVkwfpdKRGLATG--------IVIAGFGLGSLIFSPLIAYLINTVGVPTTFLILGIIFLIIIVIGAFL 177

                 .
gi 612495055 182 F 182
Cdd:cd17353  178 I 178
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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