clathrin adaptor mu subunit, partial [Streptanthus longisiliquus]
Protein Classification
longin-like domain-containing protein( domain architecture ID 1000061)
longin-like domain-containing protein; longin-like domains are small protein domains present in a variety of proteins and members of protein complexes involved in or required for different steps during the transport of proteins from the ribosome to the ER to the plasma membrane, via the Golgi apparatus
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| longin-like super family | cl38905 | Longin-like domains; Longin-like domains are small protein domains present in a variety of ... |
1-30 | 3.15e-14 | ||
Longin-like domains; Longin-like domains are small protein domains present in a variety of proteins and members of protein complexes involved in or required for different steps during the transport of proteins from the ribosome to the ER to the plasma membrane, via the Golgi apparatus. Examples are mu and sigma subunits of the heterotetrameric adaptor protein (AP) complex, zeta and delta subunits of the heterotetrameric F-COPI complex, a subgroup of R-SNARE proteins, a subfamily of the transport protein particle (TRAPP), and the signal recognition particle receptor subunit alpha (SR-alpha). The actual alignment was detected with superfamily member cd14837: Pssm-ID: 365781 Cd Length: 139 Bit Score: 61.77 E-value: 3.15e-14
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| Name | Accession | Description | Interval | E-value | ||
| AP3_Mu_N | cd14837 | AP-3 complex subunit mu N-terminal domain; AP-3 complex mu subunit is part of the ... |
1-30 | 3.15e-14 | ||
AP-3 complex subunit mu N-terminal domain; AP-3 complex mu subunit is part of the heterotetrameric adaptor protein (AP)-1 complex which consists of one large delta-, one beta-, one mu-, and one sigma-subunit. AP complexes link the cytosolic domains of the cargo proteins to the protein coat that induces vesicle budding in the donor compartment during vesicle transport. AP-3 binds the coat protein clathrin and the phospholipid PI(3)P and it is localized in the endosome. The mu subunit is comprised of an N-terminal longin domain followed by a C-terminal domain which is involved in the binding of the Y-X-X-Phi sorting signal. Pssm-ID: 341441 Cd Length: 139 Bit Score: 61.77 E-value: 3.15e-14
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| Name | Accession | Description | Interval | E-value | ||
| AP3_Mu_N | cd14837 | AP-3 complex subunit mu N-terminal domain; AP-3 complex mu subunit is part of the ... |
1-30 | 3.15e-14 | ||
AP-3 complex subunit mu N-terminal domain; AP-3 complex mu subunit is part of the heterotetrameric adaptor protein (AP)-1 complex which consists of one large delta-, one beta-, one mu-, and one sigma-subunit. AP complexes link the cytosolic domains of the cargo proteins to the protein coat that induces vesicle budding in the donor compartment during vesicle transport. AP-3 binds the coat protein clathrin and the phospholipid PI(3)P and it is localized in the endosome. The mu subunit is comprised of an N-terminal longin domain followed by a C-terminal domain which is involved in the binding of the Y-X-X-Phi sorting signal. Pssm-ID: 341441 Cd Length: 139 Bit Score: 61.77 E-value: 3.15e-14
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| AP1_Mu_N | cd14835 | AP-1 complex subunit mu N-terminal domain; AP-1 complex mu subunit is part of the ... |
1-23 | 3.39e-08 | ||
AP-1 complex subunit mu N-terminal domain; AP-1 complex mu subunit is part of the heterotetrameric adaptor protein (AP)-1 complex which consists of one large gamma-, one beta-, one mu-, and one sigma-subunit. AP complexes link the cytosolic domains of the cargo proteins to the protein coat that induces vesicle budding in the donor compartment during vesicle transport. In the case of AP-1 the coat protein is clathrin. AP-1 binds the phospholipid PI(4)P which plays a role in its localisation to the trans-Golgi network (TGN)/endosome. The mu subunit is comprised of an N-terminal longin domain followed by a C-terminal domain which is involved in the binding of the Y-X-X-Phi sorting signal. Pssm-ID: 341439 Cd Length: 139 Bit Score: 46.39 E-value: 3.39e-08
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| AP_Mu_N | cd14828 | AP complex subunit mu N-terminal domain; AP complex mu subunits are part of the ... |
1-23 | 3.05e-06 | ||
AP complex subunit mu N-terminal domain; AP complex mu subunits are part of the heterotetrameric adaptor protein (AP) complex which consists of one large subunit (alpha-, gamma-, delta- or epsilon), one beta-, one mu-, and one sigma-subunit. In general, AP complexes link the cytosolic domains of the cargo proteins to the protein coat that induces vesicle budding in the donor compartment during vesicle transport. In most cases the coat protein is clathrin (AP1 and AP2 complex), but some of the other members of the AP complex family are associated with nonclathrin coats. The mu subunit is comprised of an N-terminal longin domain followed by a C-terminal domain which is involved in the binding of the Y-X-X-Phi sorting signal. Pssm-ID: 341432 Cd Length: 136 Bit Score: 41.03 E-value: 3.05e-06
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| AP2_Mu_N | cd14836 | AP-2 complex subunit mu N-terminal domain; AP-2 complex mu subunit is part of the ... |
1-23 | 4.22e-04 | ||
AP-2 complex subunit mu N-terminal domain; AP-2 complex mu subunit is part of the heterotetrameric adaptor protein (AP)-2 complex which consists of one large alpha-, one beta-, one mu-, and one sigma-subunit. AP complexes link the cytosolic domains of the cargo proteins to the protein coat that induces vesicle budding in the donor compartment during vesicle transport. In the case of AP-2 the coat protein is clathrin. AP-2 binds the phospholipid PI(4,5)P2 which is important for its localisation to the plasma membrane. The mu subunit is comprised of an N-terminal longin domain followed by a C-terminal domain which is involved in the binding of the Y-X-X-Phi sorting signal. Pssm-ID: 341440 Cd Length: 140 Bit Score: 35.58 E-value: 4.22e-04
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