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Conserved domains on  [gi|574593479|gb|AHG48637|]
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fumarylacetoacetate hydrolase (plasmid) [Rhizobium leguminosarum bv. trifolii CB782]

Protein Classification

fumarylacetoacetate hydrolase family protein( domain architecture ID 11467721)

fumarylacetoacetate (FAA) hydrolase family protein similar to FAA hydrolase that catalyzes the hydrolysis of 4-fumarylacetoacetate to form acetoacetate and fumarate

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
COG3970 COG3970
Fumarylacetoacetate (FAA) hydrolase family protein [General function prediction only];
13-385 0e+00

Fumarylacetoacetate (FAA) hydrolase family protein [General function prediction only];


:

Pssm-ID: 443170 [Multi-domain]  Cd Length: 335  Bit Score: 604.52  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 574593479  13 GLFVGRVWNPEVA-GPSVVTLRDGLLVDMTScEAPTLSALLEREDAAGFVRAASGKLIGPLEEIAANSTGAPDEARAYLL 91
Cdd:COG3970    3 ATLVGRVWRPGVGgGPRVVVVRGGRVYDLTA-AAPTVSDLLEAPDPAAAVRAAAGERLGSLDDLLNSLGAPRDPADPRLL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 574593479  92 APADLQAVKACGVTFAQSMTERVIEEKAAgnpdraaairervstliggsltnlkagspeaakvkqalidEGMWSQYLEVG 171
Cdd:COG3970   82 APVDLQEVKAAGVTFARSMLERVIEEQAA----------------------------------------EGLWSQYLEVY 121
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 574593479 172 IGPDAEVFTKAPVLSSVGWGADVGLHPISTWNNPEPEIVLAVNSRGEIKGATLGNDVNLRDVEGRSALLLGKAKDNNASC 251
Cdd:COG3970  122 IGPDPEIFTKATPLRSVGPGAPVGIRPDSEWNNPEPELVLVVNSRGEIVGATLGNDVNLRDIEGRSALLLPQAKDNNASC 201
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 574593479 252 SIGPFIRLFDAGYGLGDVRKAELDLKVTGQDGFVMHGKSSMSQISRDPTDLVKQTVGAHHQYPDGFMLFLGTLFAPTQDR 331
Cdd:COG3970  202 AIGPFIRLFDETFTLDDVRDLEIRLTIEGEDGFVLEGSSSMAEISRDPEELVAQTLGRHHQYPDGFVLFTGTLFAPTQDR 281
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....
gi 574593479 332 GAPKQGFTHKIGDVVQISSAGLGTLINTVRLSTECPPWTFGISALMSNLAKRGL 385
Cdd:COG3970  282 DGPGQGFTHKPGDVVEISIPGLGTLVNTVVLSDEAPPWTFGIRALMRNLAARGL 335
 
Name Accession Description Interval E-value
COG3970 COG3970
Fumarylacetoacetate (FAA) hydrolase family protein [General function prediction only];
13-385 0e+00

Fumarylacetoacetate (FAA) hydrolase family protein [General function prediction only];


Pssm-ID: 443170 [Multi-domain]  Cd Length: 335  Bit Score: 604.52  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 574593479  13 GLFVGRVWNPEVA-GPSVVTLRDGLLVDMTScEAPTLSALLEREDAAGFVRAASGKLIGPLEEIAANSTGAPDEARAYLL 91
Cdd:COG3970    3 ATLVGRVWRPGVGgGPRVVVVRGGRVYDLTA-AAPTVSDLLEAPDPAAAVRAAAGERLGSLDDLLNSLGAPRDPADPRLL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 574593479  92 APADLQAVKACGVTFAQSMTERVIEEKAAgnpdraaairervstliggsltnlkagspeaakvkqalidEGMWSQYLEVG 171
Cdd:COG3970   82 APVDLQEVKAAGVTFARSMLERVIEEQAA----------------------------------------EGLWSQYLEVY 121
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 574593479 172 IGPDAEVFTKAPVLSSVGWGADVGLHPISTWNNPEPEIVLAVNSRGEIKGATLGNDVNLRDVEGRSALLLGKAKDNNASC 251
Cdd:COG3970  122 IGPDPEIFTKATPLRSVGPGAPVGIRPDSEWNNPEPELVLVVNSRGEIVGATLGNDVNLRDIEGRSALLLPQAKDNNASC 201
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 574593479 252 SIGPFIRLFDAGYGLGDVRKAELDLKVTGQDGFVMHGKSSMSQISRDPTDLVKQTVGAHHQYPDGFMLFLGTLFAPTQDR 331
Cdd:COG3970  202 AIGPFIRLFDETFTLDDVRDLEIRLTIEGEDGFVLEGSSSMAEISRDPEELVAQTLGRHHQYPDGFVLFTGTLFAPTQDR 281
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....
gi 574593479 332 GAPKQGFTHKIGDVVQISSAGLGTLINTVRLSTECPPWTFGISALMSNLAKRGL 385
Cdd:COG3970  282 DGPGQGFTHKPGDVVEISIPGLGTLVNTVVLSDEAPPWTFGIRALMRNLAARGL 335
FAA_hydrolase pfam01557
Fumarylacetoacetate (FAA) hydrolase family; This family consists of fumarylacetoacetate (FAA) ...
174-360 1.86e-06

Fumarylacetoacetate (FAA) hydrolase family; This family consists of fumarylacetoacetate (FAA) hydrolase, or fumarylacetoacetate hydrolase (FAH) and it also includes HHDD isomerase/OPET decarboxylase from E. coli strain W. FAA is the last enzyme in the tyrosine catabolic pathway, it hydrolyses fumarylacetoacetate into fumarate and acetoacetate which then join the citric acid cycle. Mutations in FAA cause type I tyrosinemia in humans this is an inherited disorder mainly affecting the liver leading to liver cirrhosis, hepatocellular carcinoma, renal tubular damages and neurologic crises amongst other symptoms. The enzymatic defect causes the toxic accumulation of phenylalanine/tyrosine catabolites. The E. coli W enzyme HHDD isomerase/OPET decarboxylase contains two copies of this domain and functions in fourth and fifth steps of the homoprotocatechuate pathway; here it decarboxylates OPET to HHDD and isomerizes this to OHED. The final products of this pathway are pyruvic acid and succinic semialdehyde. This family also includes various hydratases and 4-oxalocrotonate decarboxylases which are involved in the bacterial meta-cleavage pathways for degradation of aromatic compounds. 2-hydroxypentadienoic acid hydratase encoded by mhpD in E. coli is involved in the phenylpropionic acid pathway of E. coli and catalyzes the conversion of 2-hydroxy pentadienoate to 4-hydroxy-2-keto-pentanoate and uses a Mn2+ co-factor. OHED hydratase encoded by hpcG in E. coli is involved in the homoprotocatechuic acid (HPC) catabolism. XylI in P. putida is a 4-Oxalocrotonate decarboxylase.


Pssm-ID: 460252  Cd Length: 210  Bit Score: 48.44  E-value: 1.86e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 574593479  174 PDAEVFTKAPVLSSVGWGADVGLHPISTWNNPEPEIVLAVNSRGE----------IKGATLGNDVNLRDV---EGRSALL 240
Cdd:pfam01557  24 PIPLVLFVKPPSSLIGPGDPIVRPAGVTKLDYEAELAVVIGRPARdvspeealdyIFGYTLANDVSARDLqrrEMPLQWF 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 574593479  241 LGKAKDnnASCSIGPFIRLFDAGYGLGDVRkaeLDLKVTG---QDGFVMHGKSSM----SQISRDptdlvkQTVGAhhqy 313
Cdd:pfam01557 104 RGKSFD--GFTPLGPWIVTRDELPDPGDLR---LRLRVNGevrQDGNTSDMIFSPaeliAHLSQF------MTLRP---- 168
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 574593479  314 pdGFMLFLGTLfAPTQDRGAPKQGFTHkiGDVVQISSAGLGTLINTV 360
Cdd:pfam01557 169 --GDIILTGTP-SGVGAGRAPPVFLKP--GDTVEVEIEGLGTLRNTV 210
 
Name Accession Description Interval E-value
COG3970 COG3970
Fumarylacetoacetate (FAA) hydrolase family protein [General function prediction only];
13-385 0e+00

Fumarylacetoacetate (FAA) hydrolase family protein [General function prediction only];


Pssm-ID: 443170 [Multi-domain]  Cd Length: 335  Bit Score: 604.52  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 574593479  13 GLFVGRVWNPEVA-GPSVVTLRDGLLVDMTScEAPTLSALLEREDAAGFVRAASGKLIGPLEEIAANSTGAPDEARAYLL 91
Cdd:COG3970    3 ATLVGRVWRPGVGgGPRVVVVRGGRVYDLTA-AAPTVSDLLEAPDPAAAVRAAAGERLGSLDDLLNSLGAPRDPADPRLL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 574593479  92 APADLQAVKACGVTFAQSMTERVIEEKAAgnpdraaairervstliggsltnlkagspeaakvkqalidEGMWSQYLEVG 171
Cdd:COG3970   82 APVDLQEVKAAGVTFARSMLERVIEEQAA----------------------------------------EGLWSQYLEVY 121
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 574593479 172 IGPDAEVFTKAPVLSSVGWGADVGLHPISTWNNPEPEIVLAVNSRGEIKGATLGNDVNLRDVEGRSALLLGKAKDNNASC 251
Cdd:COG3970  122 IGPDPEIFTKATPLRSVGPGAPVGIRPDSEWNNPEPELVLVVNSRGEIVGATLGNDVNLRDIEGRSALLLPQAKDNNASC 201
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 574593479 252 SIGPFIRLFDAGYGLGDVRKAELDLKVTGQDGFVMHGKSSMSQISRDPTDLVKQTVGAHHQYPDGFMLFLGTLFAPTQDR 331
Cdd:COG3970  202 AIGPFIRLFDETFTLDDVRDLEIRLTIEGEDGFVLEGSSSMAEISRDPEELVAQTLGRHHQYPDGFVLFTGTLFAPTQDR 281
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....
gi 574593479 332 GAPKQGFTHKIGDVVQISSAGLGTLINTVRLSTECPPWTFGISALMSNLAKRGL 385
Cdd:COG3970  282 DGPGQGFTHKPGDVVEISIPGLGTLVNTVVLSDEAPPWTFGIRALMRNLAARGL 335
YcgM COG0179
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) ...
178-361 1.68e-07

2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 439949  Cd Length: 206  Bit Score: 51.22  E-value: 1.68e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 574593479 178 VFTKAPvlSS-VGWGADVGLHPISTWNNPEPEIVLAVNSRGE----------IKGATLGNDVNLRDVEGRSAL--LLGKA 244
Cdd:COG0179   32 LFLKPP--SAlVGPGDPIPLPAGSGKLDYEGELAVVIGKRARnvseedaldhVAGYTVANDVTARDLQRERGGqwTRGKS 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 574593479 245 KDNnaSCSIGPFIRLFDAgygLGDVRKAELDLKVTG---QDGFVmhgkSSM--------SQISRD----PTDLVkqtvga 309
Cdd:COG0179  110 FDT--FCPLGPWIVTADE---IPDPQDLRIRLRVNGevrQDGNT----SDMifsvaeliAYLSQFmtlePGDVI------ 174
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 574593479 310 hhqypdgfmlFLGT------LfaptqdrgapkqgfthKIGDVVQISSAGLGTLINTVR 361
Cdd:COG0179  175 ----------LTGTpagvgpL----------------KPGDVVEVEIEGIGTLRNTVV 206
FAA_hydrolase pfam01557
Fumarylacetoacetate (FAA) hydrolase family; This family consists of fumarylacetoacetate (FAA) ...
174-360 1.86e-06

Fumarylacetoacetate (FAA) hydrolase family; This family consists of fumarylacetoacetate (FAA) hydrolase, or fumarylacetoacetate hydrolase (FAH) and it also includes HHDD isomerase/OPET decarboxylase from E. coli strain W. FAA is the last enzyme in the tyrosine catabolic pathway, it hydrolyses fumarylacetoacetate into fumarate and acetoacetate which then join the citric acid cycle. Mutations in FAA cause type I tyrosinemia in humans this is an inherited disorder mainly affecting the liver leading to liver cirrhosis, hepatocellular carcinoma, renal tubular damages and neurologic crises amongst other symptoms. The enzymatic defect causes the toxic accumulation of phenylalanine/tyrosine catabolites. The E. coli W enzyme HHDD isomerase/OPET decarboxylase contains two copies of this domain and functions in fourth and fifth steps of the homoprotocatechuate pathway; here it decarboxylates OPET to HHDD and isomerizes this to OHED. The final products of this pathway are pyruvic acid and succinic semialdehyde. This family also includes various hydratases and 4-oxalocrotonate decarboxylases which are involved in the bacterial meta-cleavage pathways for degradation of aromatic compounds. 2-hydroxypentadienoic acid hydratase encoded by mhpD in E. coli is involved in the phenylpropionic acid pathway of E. coli and catalyzes the conversion of 2-hydroxy pentadienoate to 4-hydroxy-2-keto-pentanoate and uses a Mn2+ co-factor. OHED hydratase encoded by hpcG in E. coli is involved in the homoprotocatechuic acid (HPC) catabolism. XylI in P. putida is a 4-Oxalocrotonate decarboxylase.


Pssm-ID: 460252  Cd Length: 210  Bit Score: 48.44  E-value: 1.86e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 574593479  174 PDAEVFTKAPVLSSVGWGADVGLHPISTWNNPEPEIVLAVNSRGE----------IKGATLGNDVNLRDV---EGRSALL 240
Cdd:pfam01557  24 PIPLVLFVKPPSSLIGPGDPIVRPAGVTKLDYEAELAVVIGRPARdvspeealdyIFGYTLANDVSARDLqrrEMPLQWF 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 574593479  241 LGKAKDnnASCSIGPFIRLFDAGYGLGDVRkaeLDLKVTG---QDGFVMHGKSSM----SQISRDptdlvkQTVGAhhqy 313
Cdd:pfam01557 104 RGKSFD--GFTPLGPWIVTRDELPDPGDLR---LRLRVNGevrQDGNTSDMIFSPaeliAHLSQF------MTLRP---- 168
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 574593479  314 pdGFMLFLGTLfAPTQDRGAPKQGFTHkiGDVVQISSAGLGTLINTV 360
Cdd:pfam01557 169 --GDIILTGTP-SGVGAGRAPPVFLKP--GDTVEVEIEGLGTLRNTV 210
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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