|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-666 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1247.48 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 1 LLGVGLLLFPIATKNLRRMWTFLSIFLLSIVMIFSLYLSIQQIFLSCIHQNVWSWTINNEFSFEFGYFIDPLTSIMSILI 80
Cdd:CHL00025 21 LIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILI 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 81 TTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFV 160
Cdd:CHL00025 101 TTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFV 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 161 TNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILNNRVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPI 240
Cdd:CHL00025 181 TNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPI 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 241 SALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR 320
Cdd:CHL00025 261 SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYR 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 321 SALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEI 400
Cdd:CHL00025 341 AALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEI 420
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 401 LNDSLLFSPIFAIIACSTAGLTAFYMFRLYLLTFEGHLNTYFLNYSGKKSSSFYSLSLWGKEEEKKLNKNFglvPLLTMN 480
Cdd:CHL00025 421 LNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWGKEESKKINKLL---LLLTMN 497
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 481 NTKRASFFCNKTYKISNNVRNQIFITVENFGlNTRTFYYPHESDNTILFPMLILLLFTLFIGAIGIPFNQEGIDLDILSK 560
Cdd:CHL00025 498 NNERVSFFSKKTYKIDGNVRNMIRSFITIFG-NKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSK 576
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 561 LFTPSINLLHKNSQNFVDWYEFLRNATFSVSIAFFGIFIAYCLYKPFYSSLLNLTLLNSFQKWNSKRIRWEKLINFVYNW 640
Cdd:CHL00025 577 WLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINSFVKGGPKRIFLDKIINVIYNW 656
|
650 660
....*....|....*....|....*.
gi 528791148 641 SYNRGYIDAFFKTSLIESLRRLAKQT 666
Cdd:CHL00025 657 SYNRGYIDAFYTISFIKGIRGLAELT 682
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-666 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 618.58 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 1 LLGVGLLLFPIATKNLRRMWTFLSIFLLSIVMIFSLYLSIQQIFLSCIHQNVWSWTINNEFSFEFGYFIDPLTSIMSILI 80
Cdd:PRK07376 21 LVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGDFHLPMGYVIDPLGAVMLVLV 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 81 TTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFV 160
Cdd:PRK07376 101 TTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFV 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 161 TNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILNNRVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPI 240
Cdd:PRK07376 181 VNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDAMEGPTPI 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 241 SALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR 320
Cdd:PRK07376 261 SALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYS 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 321 SALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEI 400
Cdd:PRK07376 341 AGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEI 420
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 401 LNDSLLFSPIFAIIACSTAGLTAFYMFRLYLLTFEGhlntyflNYSGKKSSSFYSLSLWGKEEEKKLNKNFGLVPLLTMN 480
Cdd:PRK07376 421 LGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEG-------EFRGNDKELQKELLAAADAPGHHEGHHEEHGEHHHHS 493
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 481 NTkrasffcnktykisnnvrnqifitvenfglntrtfyyPHESDNTILFPMLILLLFTLFIGAIGIPFNQEGIDLdilsk 560
Cdd:PRK07376 494 GS-------------------------------------PHESPWTMTLPLVVLAVPSVLIGLLGTPWNNRFEAF----- 531
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 561 LFTPSINLLHKNSqnfVDWYEFLRNATFSVSIAFFGIFIAYCLYkpfyssllnltllnSFQKWNSKRIrwEKLINFVYNW 640
Cdd:PRK07376 532 LHAPGEALEAAAH---FEWGEFLILAGASVGIALIGITLASLMY--------------LLKKIDPAAI--AERFPPLYQF 592
|
650 660
....*....|....*....|....*.
gi 528791148 641 SYNRGYIDAFFKTSLIESLRRLAKQT 666
Cdd:PRK07376 593 SLNKWYLDDIYEKLFVKGSRRLARQV 618
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
4-436 |
1.15e-173 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 508.54 E-value: 1.15e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 4 VGLLLFPIATKNLRRMWTF-LSIFLLSIVMIFSLYLsIQQIFLSCIHQNVWSWTINNEFSFEFGYFIDPLTSIMSILITT 82
Cdd:COG1009 13 LGALLAGLLGRRLGRRAAGwLAALAPLAAFVLSLLL-FPAVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTG 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 83 VGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTN 162
Cdd:COG1009 92 VGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVT 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 163 RVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLIlnnrvNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISA 242
Cdd:COG1009 172 RVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIL-----SSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 243 LIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSA 322
Cdd:COG1009 247 LLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAA 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 323 LFHLITHAYSKALLFLGSGSIIHSMEaivgyspdkSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILN 402
Cdd:COG1009 327 LFHLLTHAFFKALLFLGAGSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILE 397
|
410 420 430
....*....|....*....|....*....|....*..
gi 528791148 403 ---DSLLFSPIFAIIACSTAGLTAFYMFRLYLLTFEG 436
Cdd:COG1009 398 aalEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFG 434
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
22-436 |
2.50e-172 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 505.85 E-value: 2.50e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 22 FLSiFLLSIVMIFSLYLSIQQIFlsciHQNVWSWTINNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGY 101
Cdd:PRK06590 40 GLS-ALLSLVVFFDFLLGGGRAF----SQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGY 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 102 LRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITG 181
Cdd:PRK06590 115 RRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFG 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 182 SFEFQdlfEIFNNLILNNRVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 261
Cdd:PRK06590 195 SLNYD---EVFAAAPQFFGLGWSALTLICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMS 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 262 PLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSG 341
Cdd:PRK06590 272 PLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAG 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 342 SIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFSPIFA-IIACSTAG 420
Cdd:PRK06590 352 SVIHAM--------HHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANGHINLfVAGLVGAF 423
|
410
....*....|....*.
gi 528791148 421 LTAFYMFRLYLLTFEG 436
Cdd:PRK06590 424 LTAFYSFRLIFLVFHG 439
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
21-436 |
2.25e-150 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 449.04 E-value: 2.25e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 21 TFLSIFLLSIVMIFSLYLSIQQIFLSCIHQNVWSWTINNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQG 100
Cdd:TIGR01974 33 GIGSVGLSAALSAFVFVDFFLNGEGEAFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEG 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 101 YLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWIT 180
Cdd:TIGR01974 113 YSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYF 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 181 GSFEFQDLFEIFNNLILNnrvnllFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 260
Cdd:TIGR01974 193 GTLNFQEVFALAPGAFFS------ALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVART 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 261 LPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGS 340
Cdd:TIGR01974 267 SPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGA 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 341 GSIIHSMEaivgyspdKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSL--LFSPIFAIIACST 418
Cdd:TIGR01974 347 GSVIHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIG 418
|
410
....*....|....*...
gi 528791148 419 AGLTAFYMFRLYLLTFEG 436
Cdd:TIGR01974 419 AFLTAFYSFRLIFMVFHG 436
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
428-667 |
4.36e-113 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 339.59 E-value: 4.36e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 428 RLYLLTFEGHLNTYFLNYSGKKSSSFYSLSLWGKEEEKKLNKNFGLVPLLTMNNTKRASFFCNKTYKISNNVRNQI--FI 505
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTLLLLTMNNNEKVSFFSKKTYRIDGNVRNMTrpFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 506 TVENFGlNTRTFYYPHESDNTILFPMLILLLFTLFIGAIGIPFNQEGIDLDILSKLFTPSINLLHKNSQNFVDWYEFLRN 585
Cdd:pfam01010 81 TITHFD-NKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNSNNSVDWYEFVTN 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 586 ATFSVSIAFFGIFIAYCLYKPFYSSLLNLTLLNSFQKWNSKRIRWEKLINFVYNWSYNRGYIDAFFKTSLIESLRRLAKQ 665
Cdd:pfam01010 160 AIFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLAEL 239
|
..
gi 528791148 666 TN 667
Cdd:pfam01010 240 TH 241
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
22-434 |
1.38e-104 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 330.50 E-value: 1.38e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 22 FLSIFLLSIVMIFSLYLSIQQIF-LSCIHQNVWSWTINNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQG 100
Cdd:MTH00020 30 ILTSSCLIISLSWSFLIFYEILFnSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPH 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 101 YLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWIT 180
Cdd:MTH00020 110 IPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRF 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 181 GSFEFQDlfeIFNNLILNNRVNLlflTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 260
Cdd:MTH00020 190 GSLDFSS---VFNMVVSAPSSDI---TLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRS 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 261 LPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGS 340
Cdd:MTH00020 264 SPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSA 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 341 GSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLL-FSPIFAI-IACST 418
Cdd:MTH00020 344 GSVIHAL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGqYYLIFAYwLGCFS 415
|
410
....*....|....*.
gi 528791148 419 AGLTAFYMFRLYLLTF 434
Cdd:MTH00020 416 ALLTAFYSIRLIYLTF 431
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
20-454 |
6.93e-104 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 328.89 E-value: 6.93e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 20 WTFLSIFLLSIVMIFSLYLSIqqIFLSCIHQNVWSWTINNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQ 99
Cdd:MTH00210 31 LTSSCIVISAIVSCCIFYETT--LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDP 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 100 GYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWI 179
Cdd:MTH00210 109 HIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKE 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 180 TGSFEFQDLFEIFNNLILNNRvnllfLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR 259
Cdd:MTH00210 189 FGTLEFSTISSLLVTNINKES-----LTIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIR 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 260 LLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLG 339
Cdd:MTH00210 264 SGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLS 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 340 SGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILndSLLFSPIFAIIA---- 415
Cdd:MTH00210 344 AGSVIHAV--------SDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLIL--ELTYDKYYIAFAywlg 413
|
410 420 430
....*....|....*....|....*....|....*....
gi 528791148 416 CSTAGLTAFYMFRLYLLTFEGHLNTYFLNYSGKKSSSFY 454
Cdd:MTH00210 414 SFSALLTAFYSIRLIYLTFITNTNSKKEVFIGVHESSWN 452
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-437 |
3.08e-85 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 279.53 E-value: 3.08e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 1 LLGVGLLLFPIATK-NLRRMWTFLSIFLLSIVMIFSLYLSIQQIFLSCIHQnvWSWTINNEFSFEFGYFIDPLTSIMSIL 79
Cdd:MTH00211 10 LLILILLLLPLLLPlNNSKLHIKKAVKLSFFISLIPLLIFLDQGLETILTN--WSWINLGLFSLNLSFKFDFYSIFFTSV 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 80 ITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAF 159
Cdd:MTH00211 88 ALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 160 VTNRVGDFGLLLGILGLYWITGSFEFQDLFeifnnlilnnrVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTP 239
Cdd:MTH00211 168 IYNRIGDIGLLLSMVWLLLNLNSWEISQLF-----------ILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 240 ISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY 319
Cdd:MTH00211 237 VSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQP 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 320 RSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDE 399
Cdd:MTH00211 317 QLAFLHICTHAFFKAMLFMCSGSIIHGL--------NNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDL 388
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 528791148 400 IL---NDSLL--FSPIFAIIAcstAGLTAFYMFRLYLLTFEGH 437
Cdd:MTH00211 389 ILesmNGSYLnaWALLLTLLA---TSLTAAYSFRLIFLSLGGY 428
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
48-401 |
4.73e-82 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 272.99 E-value: 4.73e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 48 IHQNVWSWTINNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQV 127
Cdd:MTH00032 57 VHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQL 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 128 YFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDL------FEIFNNLILNNRV 201
Cdd:MTH00032 137 FIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgSGIMDRGYYGGGA 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 202 NLLFL---TLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIG 278
Cdd:MTH00032 217 YESPLapfAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFG 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 279 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM-GSYRSALFHLITHAYSKALLFLGSGSIIHSMEAivgyspdK 357
Cdd:MTH00032 297 ALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV-------D 369
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 528791148 358 SQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEIL 401
Cdd:MTH00032 370 EQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
121-420 |
1.59e-79 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 254.55 E-value: 1.59e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 121 SSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILNNR 200
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 201 VNLLFLtlcafLLFVGPIAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF-IVIPSIMYIISLIG 278
Cdd:pfam00361 81 LLLLFL-----LILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 279 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSIIHSMEaivgysp 355
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV------- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 528791148 356 dKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAG 420
Cdd:pfam00361 228 -HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
22-434 |
5.65e-75 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 252.97 E-value: 5.65e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 22 FLSIFLLSIVMIFSLYLSIQQIFLSC--IHQNVWSWTINNEFSFEFGYFIDpltsIMSILITTVGILV----LIYSDNYM 95
Cdd:MTH00208 56 NFSISLLKTLAFLSLINLLIWILLGCpnINISLSNWLSNTLFNFSLSFIFD----FYFILFFSVALFVtwsiIEFSHYYM 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 96 SHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILG 175
Cdd:MTH00208 132 SNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSL 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 176 LYWITGSFefqDLFEIFnnliLNNRVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF 255
Cdd:MTH00208 212 SLINFNSW---NLNEIL----SLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVF 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 256 LVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKAL 335
Cdd:MTH00208 285 LLIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAM 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 336 LFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEIL-----NDSLLFSPI 410
Cdd:MTH00208 365 LFLCSGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILeaglaSISNLLSII 436
|
410 420
....*....|....*....|....
gi 528791148 411 FAIIACStagLTAFYMFRLYLLTF 434
Cdd:MTH00208 437 LALIATL---LTAVYSFRIIFFCF 457
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-429 |
1.47e-74 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 250.98 E-value: 1.47e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 1 LLGVGLLLFPIATKNlrRMWTFLSI-------FLLSIV--MIFsLYLSIQQIFLScihqnvWSW-TINN---EFSFEFGY 67
Cdd:MTH00066 12 ILSLLLLILPLLLPK--SNNFHTNVktsvktaFFISLIplMIF-INQGLESITTS------FHWmNIFNfniNSSFKFDQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 68 FidpltsimSILITTVGILV----LIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIG 143
Cdd:MTH00066 83 Y--------SIIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIG 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 144 FWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILnnrvNLLFLTLCAfllfvgpIAKSAQ 223
Cdd:MTH00066 155 WWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLNDNSTL----PLLGLILAA-------AGKSAQ 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 224 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYST 303
Cdd:MTH00066 224 FGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFST 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 304 MSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLIGTL 383
Cdd:MTH00066 304 SSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQKALPITTSCLTIGSL 375
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 528791148 384 SLCGIPPLACFWSKDEI---LNDSLL--FSPIFAIIACStagLTAFYMFRL 429
Cdd:MTH00066 376 ALTGTPFLAGFFSKDAIieaMNTSNLnsWALILTLIATS---FTAVYSFRI 423
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
7-437 |
1.63e-72 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 245.46 E-value: 1.63e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 7 LLFPIATKNLrrMWTFLSI-------FLLSIV-MIFSLYLSIQQIFLScihqnvWSWTINNEFSFEFGYFIDPLtsimSI 78
Cdd:MTH00004 20 ILLPLLSKNL--KNSPTTIkttvklaFLISLIpLTLFLNSGTESITTN------WPWIFTTTFNIPISFKLDQY----SL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 79 LITTVGILV----LIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANA 154
Cdd:MTH00004 88 MFLPIALFVtwsiLEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTA 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 155 CQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILNnrvnLLFLTLCAfllfvgpIAKSAQFPLHVWLPDAM 234
Cdd:MTH00004 168 ALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFSPTQTPTLP----LLGLILAA-------TGKSAQFGLHPWLPAAM 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 235 EGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL 314
Cdd:MTH00004 237 EGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTI 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 315 GMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACF 394
Cdd:MTH00004 317 GLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGF 388
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 528791148 395 WSKD---EILNDSLLFSPIFAIIACSTAgLTAFYMFRLYLLTFEGH 437
Cdd:MTH00004 389 YSKDtiiETLNTSYLNAWALLLTLLATS-FTAAYSLRMILLVQTGF 433
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
37-436 |
2.03e-72 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 245.59 E-value: 2.03e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 37 YLSIQQIFLSCIH-----QNVW-------SWT------INNEFSFEfgyfIDPLTSIMSILITTVGILVLIYSDNYMSHD 98
Cdd:PRK07390 41 YLNLLMTLLAFVHsllalRAIWnqppqqlSFPwlqvadLDLSLSLE----ISPVTLGALELITGLSLLAQIYALGYLEKD 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 99 QGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYW 178
Cdd:PRK07390 117 WGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSP 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 179 ITGSFEFQDLFEifnnLILNNRVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVA 258
Cdd:PRK07390 197 LAGTLNFSDLAA----WAATANLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLI 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 259 RLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFL 338
Cdd:PRK07390 272 KLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFM 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 339 GSGSIIHSmeaivgyspDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACST 418
Cdd:PRK07390 352 SVGSIILT---------TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLV 422
|
410
....*....|....*...
gi 528791148 419 AGLTAFYMFRLYLLTFEG 436
Cdd:PRK07390 423 NALTAFNLTRVFRLVFLG 440
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-430 |
2.47e-72 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 240.05 E-value: 2.47e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 1 LLGVGLLLFPIATKNLRRMWTFLSIFLLSIVMIFSLYLSIQQIFLSCihqNVWSWtinnEFSFEFGYFIDPLTSIMSILI 80
Cdd:COG0651 13 LLAAALLLLLGRRRRLQRALSLLASLALLALALALLLQVLAGGPLVY---ALGGW----PAPFGIVLVADRLSALFLLLT 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 81 TTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPiAANACQKAFV 160
Cdd:COG0651 86 ALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE-ALRAGLKYLI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 161 TNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLilnnrvNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAM-EGPTP 239
Cdd:COG0651 165 LNLVGSALFLLGVGLLYGATGTLNMADLAARLAEL------DPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYpAAPSP 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 240 ISALIHAAtMVAAGIFLVARLLPLFI---VIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM 316
Cdd:COG0651 239 VSALLSGL-LTKVGVYAILRVLTLLFgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 317 GSYRS---ALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLAC 393
Cdd:COG0651 318 GTPLGlagALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
410 420 430
....*....|....*....|....*....|....*....
gi 528791148 394 FWSKDEILnDSLLFS--PIFAIIACSTAGLTAFYMFRLY 430
Cdd:COG0651 389 FVSKWLLL-QAALEAgaWLLAAVLLLSSLLTLAYFVRIF 426
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
65-427 |
1.52e-71 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 246.75 E-value: 1.52e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 65 FGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGF 144
Cdd:PRK12647 58 LSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 145 WFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEiFNNLILNNRVNLLFLtlcaFLLFVGPIAKSAQF 224
Cdd:PRK12647 138 NHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREHPLYLAIL----LLVLGGAFTKSAQF 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 225 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTM 304
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTV 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 305 SQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmeaiVGyspdkSQNMILMGGLTKHVPITKTAFLIG 381
Cdd:PRK12647 293 SALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE----TG-----TRDITKLGGLRRAMPITAAAALLA 363
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 528791148 382 TLSLCGIPPLACFWSKDEILnDSLLFSPIFAIIACSTAGLTAFYMF 427
Cdd:PRK12647 364 ALSMAGLPPLFGFLAKELIY-EALLEAPLWSLILTVAAVLGNALMV 408
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
53-429 |
7.91e-69 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 235.88 E-value: 7.91e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 53 WSW----TINNEFSFEFGYFidpltsimSILITTVGILV----LIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNL 124
Cdd:MTH00137 70 WNWmntlTFDINISFKFDHY--------SIIFTPIALYVtwsiLEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNM 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 125 IQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILglyWI---TGSFEFQDLFEIFNNLILnnrv 201
Cdd:MTH00137 142 FQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMA---WMatnLNSWEIQQIFALSKDFDL---- 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 202 nllflTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIIT 281
Cdd:MTH00137 215 -----TLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALT 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 282 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNM 361
Cdd:MTH00137 290 TLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSL--------NDEQDI 361
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 528791148 362 ILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEI---LNDSLL--FSPIFAIIACStagLTAFYMFRL 429
Cdd:MTH00137 362 RKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLnaWALTLTLIATS---FTAVYSLRV 431
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
7-436 |
1.43e-68 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 238.98 E-value: 1.43e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 7 LLFPIATKNLRRMwtFLSIFLLSI-VMIFSLYLSIQQIFLScihQNVWSWTIN--NEFSFEFGYFIDPLTSIMSILITTV 83
Cdd:TIGR00940 13 SLIPILYPSDQRI--HIGWFVLAIpLVCFLYTLGLYPYTAS---GGVLHYTIDwvPELGLNFTLYMDGLALLFSLLITGI 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 84 GILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNR 163
Cdd:TIGR00940 88 GVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 164 VGDFGLLLGILGLYWITGSFEFQDLFEIFNNLilnnRVNLLFLTLcAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISAL 243
Cdd:TIGR00940 168 FGGLAMLGGLILLGKITGSFSIDAVIASADAI----RNSPLFGTA-MVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAY 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 244 IHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS----- 318
Cdd:TIGR00940 243 LHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSpsyhy 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 319 -----------YRSALFHLITHAYSKALLFLGSGSIIHSmeaivgyspDKSQNMILMGGLTKHVPITKTAFLIGTLSLCG 387
Cdd:TIGR00940 323 qgddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHE---------TGTRDIRKLGGLFHIMPITFTLAMIASAAMAG 393
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 388 IPPLACFWSKDEILN-----------DSLLFSPIFAIIACSTAGLTAFYMFRLYLLTFEG 436
Cdd:TIGR00940 394 VPPFNGFLSKEMFFAeaitahlvnpfDTVTLGYLFPYVATVASVFTFVYSLRFIHGVFFG 453
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
53-400 |
3.11e-68 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 233.98 E-value: 3.11e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 53 WSW----TINNEFSFEFGYFidpltsimSILITTVGILV----LIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNL 124
Cdd:MTH00108 66 WHWmtiqTLKLSLSFKLDYF--------SMIFIPVALFVtwsiMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNL 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 125 IQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNlilNNRVNLL 204
Cdd:MTH00108 138 FQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPN---NSNLPLM 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 205 FLTLCAfllfvgpIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLL 284
Cdd:MTH00108 215 GLLLAA-------TGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLF 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 285 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILM 364
Cdd:MTH00108 288 TAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNL--------NDEQDIRKM 359
|
330 340 350
....*....|....*....|....*....|....*.
gi 528791148 365 GGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEI 400
Cdd:MTH00108 360 GGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLI 395
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
7-437 |
4.68e-68 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 237.90 E-value: 4.68e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 7 LLFPIATKNLRRMWTFLSIFLLSIVM--IFSLYLSIQQIFLSCIHQNVW--SWTINnefsfeFGYFIDPLTSIMSILITT 82
Cdd:PRK12645 16 LLIPFLYKYFKRIHTGWFVLPVPVVLfiYFLSLIPTTMSGNTVMKTLPWipSLGIN------FTLYVDGLSLLFALLITG 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 83 VGILVLIYSDNYMSHDQGYL-RFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVT 161
Cdd:PRK12645 90 IGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLI 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 162 NRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLilnnrVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPIS 241
Cdd:PRK12645 170 TVFGGLSMLGGFILLYIMTGSFSIREMIANADEI-----QNSPLFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVS 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 242 ALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS--- 318
Cdd:PRK12645 245 AYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAasl 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 319 -------------YRSALFHLITHAYSKALLFLGSGSIIHSmeaiVGyspdkSQNMILMGGLTKHVPITKTAFLIGTLSL 385
Cdd:PRK12645 325 hyqgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHE----TG-----TRDIRKLGGLMTIMPITFTIALIGALSM 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 528791148 386 CGIPPLACFWSKDEILNDSL------LFS--------PIFAIIAcstAGLTAFYMFRLYLLTFEGH 437
Cdd:PRK12645 396 AGLPPFNGFLSKEMFFESMLnateanLFSldtwgvlfPVIAWVA---SVFTFVYSIIFIFKTFFGK 458
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
65-414 |
3.47e-67 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 227.93 E-value: 3.47e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 65 FGYFIDPLTSIMSILITTVGILVLIYSDNYMS-------HDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMC 137
Cdd:PRK06525 69 FGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLC 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 138 SYLLIGFWFTrPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILnnrvnLLFLtlcafLLFVGP 217
Cdd:PRK06525 149 SWALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKY-----LVFL-----GILFAA 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 218 IAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIP-SIMYIISLIGIITVLLGATLALAQKDIK 296
Cdd:PRK06525 218 WGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPhVIGYVGAVMAIVTLLYGFLMYLPQQDMK 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 297 RGLAYSTMSQLGYMMLALGMGSYRS------ALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKH 370
Cdd:PRK06525 298 RLLAYSTITQLGYMFFGLSLAILGSrlalegSIAYIFNHAFAKSLFFLVAGALSYSC---------GTRLLPRLRGVLKK 368
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 528791148 371 VPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAII 414
Cdd:PRK06525 369 LPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
27-415 |
3.90e-65 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 231.62 E-value: 3.90e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 27 LLSIVMIFSLYlsiQQIFLSCIHQNVWSW--TINNEFSFefgyFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRF 104
Cdd:PRK12648 37 LAALVLLALLY---PAVAAGEVIRAEIEWlpALGLNLSL----RLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRF 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 105 FAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFE 184
Cdd:PRK12648 110 FSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSYD 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 185 FQDlfeifnnlILNN----RVNLLFL-TLCAFLLfvGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR 259
Cdd:PRK12648 190 LDV--------VLAAgdliRAHPLYPpALVLILL--GAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLAR 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 260 LLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALL 336
Cdd:PRK12648 260 LWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLAavaAIFHIINHATFKASL 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 337 FLGSGSIIHsmEAivgyspdKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSK----DEILNDSLLFS---- 408
Cdd:PRK12648 340 FMAAGIIDH--ET-------GTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKemffAETLDTHLLGSldwl 410
|
....*...
gi 528791148 409 -PIFAIIA 415
Cdd:PRK12648 411 lPVAATLA 418
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
64-427 |
1.40e-63 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 225.09 E-value: 1.40e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 64 EFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIG 143
Cdd:PRK12649 73 EFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 144 FWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEifNNLILNNRVNLLFLTLCAFLLFVGPIAKSAQ 223
Cdd:PRK12649 153 YWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQ--DSELIENIKGHPLFLITLILIFIGAAAKSAQ 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 224 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYST 303
Cdd:PRK12649 231 GPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYST 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 304 MSQLGYMMLALGMGSYR-------SALFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNMILMGGLTKHVPITKT 376
Cdd:PRK12649 311 ISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAH--EA-------ATRDIRKLGGLRKEMPITFI 381
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 528791148 377 AFLIGTLSLCGIPPLACFWSKDEILNDSL----LFSPIFAIIACSTAGLTAFYMF 427
Cdd:PRK12649 382 VASIAALAMAGIPPLNGFLSKEMFYETSVemgaLIGGPFTIIIPAVAVLGGVFTF 436
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
52-428 |
1.37e-62 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 224.42 E-value: 1.37e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 52 VWSWTinNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYL-RFFAYMGFFNTSMLGLVTSSNLIQVYFF 130
Cdd:PRK12644 57 VVPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYVF 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 131 WELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDlfeifnnlILNNRVNLLFLTLCA 210
Cdd:PRK12644 135 WELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSE--------LLADPPTGPAVSVAV 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 211 FLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLAL 290
Cdd:PRK12644 207 VLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRAL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 291 AQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHL---ITHAYSKALLFLGSGSIIHSmeaiVGyspdkSQNMILMGGL 367
Cdd:PRK12644 287 RQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS----TG-----TRDIRKLSGL 357
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 528791148 368 TKHVPITKTAFLIGTLSLCGIPPLACFWSK----DEILNDSLLFSPIFAIIACSTAG--LTAFYMFR 428
Cdd:PRK12644 358 GRRQPVLAVVAALAAASMAGLPPLLGFVAKeaalEAVLHDGALGPAGPVVLAGIVLGsiLTVAYSLR 424
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
69-440 |
1.63e-60 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 216.93 E-value: 1.63e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 69 IDPLTSIMSILITTVGILVLIYSDNYMSHDQGYL-RFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFT 147
Cdd:PRK12646 76 LDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYN 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 148 RPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLilnnRVNLLFLTLcAFLLFVGPIAKSAQFPLH 227
Cdd:PRK12646 156 NGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHI----KNHGLFIPM-IFMFLLGAFTKSAQFPFH 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 228 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQL 307
Cdd:PRK12646 231 IWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 308 GYMMLALGMG-----------------SYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKH 370
Cdd:PRK12646 311 GMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHEA---------GTRDIRILSGMRQL 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 371 VPITKTAFLIGTLSLCGIPPLACFWSKD----------EILNDSLLFSPIFAIIACSTAGLTAFYMFRLYLLTFEGHLNT 440
Cdd:PRK12646 382 FPKMNLVMTIAALSMAGVPFLNGFLSKEmfldaltqtgQLSQFSLISMIIIVFIGVIASIFTFTYALYMVKEVFWGKYDS 461
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
19-454 |
2.44e-56 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 201.14 E-value: 2.44e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 19 MWTFLSIFLLSIVMIFsLYLSIQQIFLSCIHQNVWSWTINNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHD 98
Cdd:MTH00165 3 MCLISFFFLFFLSLIL-FFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 99 QGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYw 178
Cdd:MTH00165 82 KNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMM- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 179 ITGSFEFQDLFEIFNNLILNNrvnllfltLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVA 258
Cdd:MTH00165 160 NFGSWNFIFYLDFMKNSFEML--------LIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLI 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 259 RLLPLFIvIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFL 338
Cdd:MTH00165 232 RFNNLLF-SSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 339 GSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEIL-----NDSLLFSPIFAI 413
Cdd:MTH00165 311 CAGSIIHNM--------SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILemvsmSNLNFFIFFLFF 382
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 528791148 414 IACstaGLTAFYMFRLYLLTFEGHLNTYFLNYSGKKSSSFY 454
Cdd:MTH00165 383 FST---GLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFML 420
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
25-451 |
1.93e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 198.33 E-value: 1.93e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 25 IFLLSIVMIFSLYLSIQQIFLSCIHQNVWSWTINNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRF 104
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 105 FAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPiAANACQKAFVTNRVGDFGLLLGILglyWITgsfe 184
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSK-SLSAGMLTALTNRVGDALLILSIA---WML---- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 185 fqdLFEIFNNLILNNRVNLLFLTLcaFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLF 264
Cdd:MTH00209 158 ---MHGNWNIFYLNFNSNLGSVIS--VLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 265 IVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSII 344
Cdd:MTH00209 233 FSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNII 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 345 HSMEaivgyspdKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLL--FSPIFAIIACSTAGLT 422
Cdd:MTH00209 313 HSHG--------HSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLEsnMPIMTLILMFLSTSLT 384
|
410 420
....*....|....*....|....*....
gi 528791148 423 AFYMFRLYLLTFEGHLNTYFLNYSGKKSS 451
Cdd:MTH00209 385 AAYSMRLSYFSLWGPNSSKSLNSSFDQNK 413
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
24-454 |
2.15e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 198.14 E-value: 2.15e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 24 SIFLLSivmiFSLYLSIQQIFLSCIHQNVW-SWTINN----EFSFEFgyFIDPLTSIMSILITTVGILVLIYSDNYMSHD 98
Cdd:MTH00151 8 SFLLFS----YSVFLFPLLGYFGLNGISLIfEWELLSvsscSFSFEL--VLDWVSLSFSGVVCLISGCVFLFSSSYMSED 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 99 QGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFvTNRVGDFGLLLGilglyw 178
Cdd:MTH00151 82 PFLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDVLILLS------ 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 179 iTGSFEFQDLFEIFNNLILNnrvnllFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVA 258
Cdd:MTH00151 155 -IALLVLLGHWSILSMWDFK------LSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLI 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 259 RLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFL 338
Cdd:MTH00151 228 RFFPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFL 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 339 GSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILnDSLLFSP---IFAIIA 415
Cdd:MTH00151 308 CAGSIIHSS--------SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLIL-ESSLMSPtslLMVLLM 378
|
410 420 430
....*....|....*....|....*....|....*....
gi 528791148 416 CSTAGLTAFYMFRLYLLTFEGHLNTYFlnYSGKKSSSFY 454
Cdd:MTH00151 379 FVGVGLTALYSARLSFCLVWGSMKSSS--LSSKSDEDFY 415
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
21-431 |
2.13e-51 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 187.28 E-value: 2.13e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 21 TFLSIFLLSIVMIFSLYLSI--QQIFLScihqnvwsWTINNEFS--FEFGYFIDPLTSIMSILITTVGILVLIYSDNYMS 96
Cdd:MTH00207 11 SYLLWFMSILMFPLSLYLMMcnKTILIE--------WEIFTISSspINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 97 HDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVGDFGLLL----G 172
Cdd:MTH00207 83 EDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLsigwT 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 173 ILGLYWITGSFEFQDlfeiFNNLIlnnrvnllflTLCaflLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAA 252
Cdd:MTH00207 162 LNQGHWSITNMWQTD----MNNYI----------ALS---IMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTA 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 253 GIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYS 332
Cdd:MTH00207 225 GVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALF 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 333 KALLFLGSGSIIHSMEaivgyspdKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLF---SP 409
Cdd:MTH00207 305 KALLFVCAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYphnSL 376
|
410 420
....*....|....*....|..
gi 528791148 410 IFAIIACSTaGLTAFYMFRLYL 431
Cdd:MTH00207 377 MILMIFLAT-ALTAAYSTRFTL 397
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
1-427 |
5.64e-51 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 190.64 E-value: 5.64e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 1 LLGVGLLLFPIATKNLRRM--WTFLSIFLLSIVMIFslylsiqQIFLSCIHQNVWSWTI-------NNEFSFEFGYFIDP 71
Cdd:PRK12650 7 LAALAVVLAPPLVRVLDRKagWPLAAIFVAAAGLLL-------KELPPILDGDALTWSVtwipdllGNGVDVNLALRADA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 72 LTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFwfTRPIA 151
Cdd:PRK12650 80 LSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR--SGSGG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 152 ANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDlfeifnnlILNNRV---NLLFLTLCAFLLFVGPIAKSAQFPLHV 228
Cdd:PRK12650 158 EAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSG--------ILHSDVwaeKPGLTTVVAVLIAVAAFTKSAQFPFHF 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 229 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLG 308
Cdd:PRK12650 230 WLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLG 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 309 YMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNMILMGGLTKHVPITKTAFLIGTLSL 385
Cdd:PRK12650 310 WIVATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDH--QA-------GTRDIRRLGSLWRRMPFTFVSVTIAALSM 380
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 528791148 386 CGIPPLACFWSKDEILnDSLLFSPIFA---IIACSTAGLTAFYMF 427
Cdd:PRK12650 381 AAVPPLFGFVSKEGML-TAFLEAPGGNagvVLLLVGAALGAVFTF 424
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
22-436 |
8.05e-51 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 184.40 E-value: 8.05e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 22 FLSIFL---LSIVMIFSLYLSIQQIFLSCIHQNVWSWTiNNEFSFEFG---------YFIDPLTSIMSILITTVGILVLI 89
Cdd:PRK12667 22 LLSILLkgnRKIQKIYALLVSLITLILSILLFIQVYSS-NKPIVYLFGgwpapigivYEVDLLGALLGLLTALVMFLILI 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 90 YSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGL 169
Cdd:PRK12667 101 YSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLY 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 170 LLGILGLYWITGSFEFQDL--------FEIFNNLILNNRVNLLFLTLCAFLLFVGpiaKSAQFPLHVWLPDAM-EGPTPI 240
Cdd:PRK12667 181 FLALAFLYATFGTLNMADLsakirglsFPLTGGLAGNPPLALGVALALALWAFTI---KAAIFPNHFWLPDAHpAAPSPV 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 241 SALIhAATMVAAGIFLVARLLPLFIVIPS--------IMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMML 312
Cdd:PRK12667 258 SAML-SGLVVNVGAYAIIRFLYTIFGISPslidfraaLSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFM 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 313 ALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIP 389
Cdd:PRK12667 337 GIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAGLGRKMPIASFAFLIGALSLVGIP 407
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 528791148 390 PLACFWSKdEILNDSLLFS--PIFAIIACSTAGLTAFYMFRLYLLTFEG 436
Cdd:PRK12667 408 PLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
69-422 |
1.49e-49 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 181.06 E-value: 1.49e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 69 IDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTR 148
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 149 PIAANACQKAFVTNRVGDFGLLLGILGLYwitGSFEFQDLFEIFNNLILNNRVnllfLTLCAFLLFVGPIA-KSAQFPLH 227
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLY---GQYGTLNMAYLAVKMSENPTV----VAKIALALFIAGLAmKSGAVPVH 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 228 VWLPDAM-EGPTPISALIHAATmvAAGIFLVAR-LLPLF---IVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYS 302
Cdd:PRK08376 241 MWLPDAYpAAPSSISAMLLVIK--QAGLYALARvLFSIYgpaINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYH 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 303 TMSQLGYMMLALGMG--SYRS-------------ALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGL 367
Cdd:PRK08376 319 SVSQIGYMLLGLGVGlaALGDpamasygeialagGIYHIVNHALYKALLFLTAGAVIYET---------GTRNLNELGGL 389
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 528791148 368 TKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLT 422
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLT 444
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-429 |
1.20e-48 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 177.76 E-value: 1.20e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 1 LLGVGLLLFPIATKNLRRMWTFLsIFLLSIVMIFSLYlsIQQIFLSCIHQNVWSWtiNNEFSFEFGyfIDPLTSIMSILI 80
Cdd:PRK08375 14 LLAAALIVLLPKRRRLRWALALL-VAALTFALAISLL--PQVLDGGVIAYVVGGW--PPGIGIELR--ADSLSALFLLVT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 81 TTVGILVLIYSDNYMSHDQGylRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPiAANACQKAFV 160
Cdd:PRK08375 87 SILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR-ALAAARKYLI 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 161 TNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNnlilnnRVNLLFLTLcaFLLFVGPIAKSAQFPLHVWLPDAMEGPTPI 240
Cdd:PRK08375 164 VGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAF--GFVLLALALKAAVFPLHTWLPRAYPAAPPV 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 241 SALIHAATMVAAGIFLVARLL-----PLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALG 315
Cdd:PRK08375 236 VTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLA 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 316 MGSYRS---ALFHLITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLA 392
Cdd:PRK08375 316 LLTPLAlaaGLLHLLHHALMKGALFLAAGAI----EVTYG-----TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTS 386
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 528791148 393 CFWSKDEIL---NDSLLFSPIFAIIACSTagLTAFYMFRL 429
Cdd:PRK08375 387 GFVSKWYLVvgaVEAGQWLVLAVLLASSL--LALLYFLRI 424
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-439 |
4.53e-48 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 176.04 E-value: 4.53e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 1 LLGVGLLLFPIATKNLRRMWTFLS---IFLLSIVMIFSLYLSIQQIflscihQNVWSWTINNEFSFEFGYFIDPLTSIMS 77
Cdd:COG1008 15 LGALLLLLLPRRNARLARWVALAVsllTLLLSLYLLAGFDPGTGGF------QFVESYPWIPSLGISYHLGVDGISLPLV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 78 ILITTVGILVLIYSDNYMSHDQGylRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFW--FTRPIAANac 155
Cdd:COG1008 89 LLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIYAAI-- 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 156 qKAFVTNRVGDFGLLLGILGLYWITGSFEFqDLFEIFNNLILNNRVNLLFLtlcafLLFVGPIAKSAQFPLHVWLPDA-M 234
Cdd:COG1008 165 -KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAQLLLFL-----AFFIAFAVKVPMFPFHTWLPDAhV 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 235 EGPTPISAlIHAATMVAAGIFLVARL-LPLFiviP----SIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGY 309
Cdd:COG1008 238 EAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF---PeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGF 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 310 MMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAFLIGTLSLC 386
Cdd:COG1008 314 VLLGIFALNPLGlqgAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVLAALFLLAALASL 384
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 528791148 387 GIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRLYLLTFEGHLN 439
Cdd:COG1008 385 GLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLK 437
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
69-436 |
3.14e-40 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 156.59 E-value: 3.14e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 69 IDPLTSIMSILITTVGILVLIYSDNYMSHDQGylRFFAYMGFFN----TSMLGLVTSSNLIQVYFFWELVGMCSYLLIGF 144
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFREYEG--KGPGAMGFFYnlflASMVLVLLADDAFSFLVAWETMSLSSWFLVIA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 145 WFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLfeifnnlilnnRVNLL--FLTLCAFLL-FVGPIAKS 221
Cdd:PRK06521 156 NHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAM-----------RAAHLspFWASLVFLLaLFGFGAKA 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 222 AQFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFIVIPSIM--YIISLIGIITVLLGATLALAQKDIKRG 298
Cdd:PRK06521 225 GLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWWwgVLVLALGAISAVLGVLYALAEHDLKRL 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 299 LAYSTMSQLGYMMLALGMG--------------SYRSALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdkSQNMILM 364
Cdd:PRK06521 304 LAYSTIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATG---------TRDMEKL 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 365 GGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNdSLLFS------------PIFAIIACSTAGLTAFYMFRLYLL 432
Cdd:PRK06521 375 GGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQ-SLLSSpglpqwglklavPIAAAMLALTAALAAMCFVKFYGI 453
|
....
gi 528791148 433 TFEG 436
Cdd:PRK06521 454 TFLG 457
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
4-429 |
1.63e-39 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 151.81 E-value: 1.63e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 4 VGLLLFPIATKNLRRMWTFLSIFLLSIVMIFSLylsiqqiflscihqnvWSWTINNEFSFEFGYFIDPLTSIMSILITTV 83
Cdd:COG1007 19 VLLLLDLFLPRRSRRLLAGLALLGLLLALALLL----------------LALGGGTGTAFGGMFVVDGFALFFKLLILLA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 84 GILVLIYSDNYMSHDQGYLRFFAYMGFFNTS-MLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTN 162
Cdd:COG1007 83 ALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLLG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 163 RVGDFGLLLGILGLYWITGSFefqDLFEIFNNLILNNRVNLLFLTlcAFLLFVGPIA-KSAQFPLHVWLPDAMEG-PTPI 240
Cdd:COG1007 163 ALSSGFLLYGISLLYGATGSL---NLAGIAAALAAGGANSPLLLL--GLVLVLAGLAfKLSAVPFHMWTPDVYEGaPTPV 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 241 SALIHAATMVAAgIFLVARLL--PLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS 318
Cdd:COG1007 238 TAFLATAPKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGT 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 319 ---YRSALFHLITHAYSKALLFLgsgsIIhsmeAIVGYSPDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFW 395
Cdd:COG1007 317 plgVSAALFYLLAYLFMNLGAFA----VI----LLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFF 388
|
410 420 430
....*....|....*....|....*....|....*...
gi 528791148 396 SK----DEILNDSLLFspiFAIIACSTAGLTAFYMFRL 429
Cdd:COG1007 389 GKfyvfSAAVEAGLYW---LAVIAVLNSVISAYYYLRV 423
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
70-344 |
2.52e-38 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 149.08 E-value: 2.52e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 70 DPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRP 149
Cdd:PRK08168 68 SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 150 IAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILnnrvnLLFLTLCAFLLFVGPIAKSAQFPLHVW 229
Cdd:PRK08168 148 FARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHLAAQGA-----SPSLQAAALLLVLAVILKTAQLPVHGW 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 230 LPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGY 309
Cdd:PRK08168 223 LIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGF 301
|
250 260 270
....*....|....*....|....*....|....*
gi 528791148 310 MMLALGMGSYRSALFHLITHAYSKALLFLGSGSII 344
Cdd:PRK08168 302 MLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
29-397 |
4.40e-37 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 146.68 E-value: 4.40e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 29 SIVMIFSLYLSIQQIFLSCI--HQNVWSWTINNEFSFEFGYfidpLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFA 106
Cdd:PRK08668 29 VIGNALPLLFLIKLYFTLKVgtGEKLTLFFGGFKLTFTLTH----LSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFA 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 107 YMGFfnTSMLGLVTSSNLIQVYFFWELVGMCSYLLIgfWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQ 186
Cdd:PRK08668 105 LMSL--AGVLGVFLANDLLTLYIFWEIMTFSSFMMV--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFA 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 187 DLFEIFNNLILNNRVNLLFLTLCAFllfvgPIAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLLP- 262
Cdd:PRK08668 181 DISQGLINDTSTGFALIVFLFLLAF-----GVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPg 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 263 --------LFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAY 331
Cdd:PRK08668 256 tklfsefgTYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHAL 335
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 528791148 332 SKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSK 397
Cdd:PRK08668 336 FKGLFFLIFAAVIYRT---------GTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-429 |
2.67e-36 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 142.65 E-value: 2.67e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 1 LLGVGLLLFPIATKNlrrmWTFLSIFLL--SIVMIFSLYLSIQQIFLSCIHQNvwsWTINNEFSFEFGYFIDPLTSIMSI 78
Cdd:PRK06589 18 LVGALNLTSPFATKK----DSFIRNFLLitISIFFFGNILLIDLLFLKGIRAQ---FELMDFGNYSIGLHLEPLGLIFLL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 79 LITTVGILVLIYSDNYMSHDQGYLRFfAYMGFFNTSML---GLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANAC 155
Cdd:PRK06589 91 LIGFLWICALLYTPKYLAINNIDSSS-RFLFFFNLTILigvLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGY 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 156 QKAFVTNRVGDFGLLLGILGLYWITGSFEFQ--DLFEIFNNLILnnrvnllfltlcaFLLFVGPIAKSAQFPLHVWLPDA 233
Cdd:PRK06589 170 KYLKILMISALLLFLPAVILIYTKTGNLDFVsgGLFSKNQSIIL-------------LLMFIYGIAKTAIFPVHSWLPAA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 234 MEGPTPISALIHAATMVAAGIFLVARLLpLFIVIPSIMYII-------SLIGIITVLLGATLALAQKDIKRGLAYSTMSQ 306
Cdd:PRK06589 237 MVAHYPVSALLHAVIVVKTGLFCIYKIL-LYIFGLSYLQRIfaefnwlIFIPIVSIFYSSLKALKTDNIKKILAYSTISQ 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 307 LGYMMLALGM---GSYRSALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMILMGGLTKHVPITKTAFLIGTL 383
Cdd:PRK06589 316 LSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDKLHGTSKSFPLISFIISISSL 386
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 528791148 384 SLCGIPPLACFWSKDEIL-----NDSLLFSPIFAIIACSTAGLTAFYMFRL 429
Cdd:PRK06589 387 SLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKI 437
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
67-397 |
6.73e-36 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 141.11 E-value: 6.73e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 67 YFIDPLTSIMSILITTVGILVLIYSDNYMShDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWF 146
Cdd:PRK05777 69 LVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRR 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 147 TRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDlfeIFNNLILNNRVNLLFLTLCAFLLfVGPIAKSAQFPL 226
Cdd:PRK05777 148 DRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAG---IAKALADGSGNSLLLLFGLVFLL-VGLAFKLSAVPF 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 227 HVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLLPLFI--VIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYST 303
Cdd:PRK05777 224 HMWTPDVYEGaPTPVTAFLATAPKIAA-FAVLLRLLVVAFggLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 304 MSQLGYMMLALGMGS---YRSALFHLITHAYSKallfLGSGSIIHSMEAIVGYSPDKSQnmilMGGLTKHVPITKTAFLI 380
Cdd:PRK05777 303 IAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGEAESISD----FAGLSKRSPLLAAVMTI 374
|
330
....*....|....*..
gi 528791148 381 GTLSLCGIPPLACFWSK 397
Cdd:PRK05777 375 FMLSLAGIPPTAGFWGK 391
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
5-439 |
4.31e-34 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 136.49 E-value: 4.31e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 5 GLLLFPIAtKNLRRMWTFLSIFLLSIVMIFSLYLSIQQIFLSCIHQNVWSWTINNEFSFEFGYFIDPLTSIMSILITTVG 84
Cdd:PRK05846 17 GLLVLLTE-RFGARLARWIALIGTLLTLLLSLVLWIGFDSSNAGFQFVEKHPWIPRFGISYHLGVDGISLLLVVLTALLT 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 85 ILVLIYSDNYMSHDQGylRFFAYMGFFNTSMLGLVTSSNLIQVYFFWE--LVGMcsYLLIGFW--FTRPIAANacqKAFV 160
Cdd:PRK05846 96 PLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEamLIPM--YFLIGVWggKNRIYAAT---KFFL 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 161 TNRVGDFGLLLGILGLYWI----TGSFEFQDLFeifnNLILNNRV-NLLFLtlcAFllFVGPIAKSAQFPLHVWLPDAME 235
Cdd:PRK05846 169 YTLLGSLLMLVAIIYLVVVyynaTGTFDIADLL----NLPLPPGVqYWLFL---AF--FIAFAVKMPMFPLHTWLPDAHV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 236 GPTPISALIHAATMVAAGIF-LVARLLPLFIVIPSIM-YIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLA 313
Cdd:PRK05846 240 QAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDASHEFaPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLG 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 314 LGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPP 390
Cdd:PRK05846 320 IFAGNQLGiqgAIFQMISHGLSSAALFLLVGVLYDRL---------HTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPG 390
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 528791148 391 LACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRLYLLTFEGHLN 439
Cdd:PRK05846 391 TSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVK 439
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
1-397 |
1.06e-33 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 137.17 E-value: 1.06e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 1 LLGVGLLLFPIATKNLRR----MWTFLSIFLLSIVMIFSLYLSIQQIFLScihqnvwsWTINNEFSFEFgyFIDPLTSIM 76
Cdd:PRK08667 13 LLAAAVIPLVFRHKRKRVwqsvLWLVIAIALLLFAGSLQLFTGNPLDIPL--------WGIAPGLDITF--HIDRLAAFF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 77 SILITTVGILVLIYSDNYMSHDQGYLR---FFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAAN 153
Cdd:PRK08667 83 IILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQR 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 154 ACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLfeifnnlilnnRVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDA 233
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPL-----------GASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYA 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 234 MEG-PTPISALIhAATMVAAGIFLVARLLpLFIVIPSIMY--IISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYM 310
Cdd:PRK08667 232 HPAsPSNVSALM-SGVMLKVAVYGLVRFL-MDVLSPELWWgvLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGII 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 311 MLALG--------------MGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKT 376
Cdd:PRK08667 310 LMGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHAT---------GTRNIEKMGGLVKLMPYTSA 380
|
410 420
....*....|....*....|.
gi 528791148 377 AFLIGTLSLCGIPPLACFWSK 397
Cdd:PRK08667 381 LFLVGAVSIAALPPFNGFASE 401
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
1-436 |
5.37e-33 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 132.76 E-value: 5.37e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 1 LLGVGLLLFPIATKNLRRMWTFLSIFLLSIVMIFSLYL--SIQQIFLSCIHQNVWSWTINNEFSFEfgyfIDPLTSIMSI 78
Cdd:TIGR01972 9 LIGALLILLLPSNKDGKARWIALVVALATLLLSLLLLFqfDPTGSGFQFTEDIPWIPALGISYHLG----VDGISLLLVL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 79 LITTVGILVLIYSDNYMSHDQGYlrFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWfTRPIAANACQKA 158
Cdd:TIGR01972 85 LTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYAAMKF 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 159 FVTNRVGDFGLLLGILGLYWITG-SFEFQDLfeifNNLILNNRVNLLFLtlcaFLLFVGPIAKSAQFPLHVWLPDAM-EG 236
Cdd:TIGR01972 162 FLYTLAGSLLMLLAILGLYFLGGgTFDLLEL----LNLPLPFGVQTWLF----LAFFIAFAVKVPLFPLHTWLPDAHvEA 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 237 PTPISALIHAATMVAAGIFLVARLLPLFiviP----SIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMML 312
Cdd:TIGR01972 234 PTAGSVILAGVLLKMGTYGFLRFNLPLF---PdaslYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 313 ALGMGSYRS---ALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIP 389
Cdd:TIGR01972 311 GIFSFNELGisgAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLP 381
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 528791148 390 PLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRLYLLTFEG 436
Cdd:TIGR01972 382 GTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFG 428
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
22-458 |
5.00e-32 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 130.81 E-value: 5.00e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 22 FLSIFLLSIVMIFSLYLSIQQIFLSCIHQNVWSWTINNEFsfefgyfidpLTSIMSILITTVGILVLIYSDNYMSHDQGY 101
Cdd:MTH00095 6 FLILFFFFFLLLFILFLPFMKLNLFFLEWDFLSLKFNFYF----------NSLLFSLILLLVTLSVLVFSSYYMNGELNF 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 102 LRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTrpiaANACQKA---FVTNRVGDFGLLLGilglyw 178
Cdd:MTH00095 76 NYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNN----WDSNSGAmntALTNRIGDFFIFLF------ 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 179 ITGSFEFQDLFEIFnnlilnnrvnLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVA 258
Cdd:MTH00095 146 FSGFIFSSYYFFSF----------SFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLM 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 259 RLLPLFIVIpSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFL 338
Cdd:MTH00095 216 NFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFM 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 339 GSGSIIHSMEAivgyspdkSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLL--FSPIFAIIAC 416
Cdd:MTH00095 295 QVGYLIHSNFG--------QQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFnnYMIFFSLMFF 366
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 528791148 417 STAGLTAFYMFRLYLLTFeghLNTYFLNYSGKKSSSFYSLSL 458
Cdd:MTH00095 367 FSVFLTFGYSYRLWKSFF---LSFSKVVNVYSSSVLMNFLSL 405
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-401 |
2.42e-31 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 127.76 E-value: 2.42e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 1 LLGVGLLLFPIATKNLRRMWTFLSIFLLSIVMIFSLYLSIQqiFLScihqnvwswtinnefSFEFGYFIDPLTSIMSILI 80
Cdd:PRK07234 14 LLGFAIYLLPKLDRNLALGMAIVSAVYALGLVASMVPLELT--LLD---------------NFGVTLRADALSGYFILTN 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 81 TTVGILVLIYSdnyMSHDQGYLrFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFV 160
Cdd:PRK07234 77 ALVTLAVIFYC---WESAKTRF-FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYLFY 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 161 TNrVGDFGLLLGILGLYWITGSFEFQDLFEIfnnlilnnrvnllfLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPI 240
Cdd:PRK07234 153 SN-VAMLFYLIGAVLVYQANGTFAFSGLATA--------------DPEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPP 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 241 SALIHAATMVAAGIFLVARLLplfIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGsyr 320
Cdd:PRK07234 218 VSALLSGVVVKAGVFPLVRCA---LDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG--- 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 321 sALFHLiTHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMILMGGLTKHVPITktaflIGTLSLCGIPPLACFWSKDEI 400
Cdd:PRK07234 292 -GLYAL-AHGLVKSTLFLCAGAL---------PSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLT 355
|
.
gi 528791148 401 L 401
Cdd:PRK07234 356 L 356
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
2-396 |
1.68e-29 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 122.73 E-value: 1.68e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 2 LGVGLLLFPIATKNLRRMWTFLSIFLLSIVMIFSLYLSIQQiflscihqnvwswtiNNEFSFEFGYFIDPLTSIMSILIT 81
Cdd:PRK06458 15 LLASLLLFALRKRRLVATLNVLGITLTLILALWLVFTVPDA---------------GEIFAAGLWFFIDDLNVFFLALIG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 82 TVGILVLIYSDNYMSHDQ-------GYLRFfaYMGFFNT---SMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPiA 151
Cdd:PRK06458 80 VVGFLTSLYSIGYMRHEVehgelspVTLRL--YYGMYQLflfTMLLALTSNNLGLMWVAIEATTLSSALLVGIYRTRA-S 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 152 ANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILNNRVNL--LFLTLCAFLLFVGPIAKSAQFPLHVW 229
Cdd:PRK06458 157 LEAAWKYIIICSVGVAFALFGTILVYANAATVMGDGEMAILWTELLKHASLLdpTLMKLAFVFLLIGFGTKVGLFPMHAW 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 230 LPDA-MEGPTPISALIHAATMVAA-------GIFLVARLLPLFiviPSIMYIIslIGIITVLLGATLALAQKDIKRGLAY 301
Cdd:PRK06458 237 LPDAhSEAPSPVSALLSGVLLNVAlyavlryYILIDAAIGSDF---PGRLLLI--FGLLSVLVAAFFLLRQRDIKRLFAY 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 302 STMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAF 378
Cdd:PRK06458 312 SSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKY---------GTRDINVIRGLLKVSPLTGWGL 382
|
410
....*....|....*...
gi 528791148 379 LIGTLSLCGIPPLACFWS 396
Cdd:PRK06458 383 MLGALAIAGMPPFGVFIS 400
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
117-401 |
8.44e-29 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 120.64 E-value: 8.44e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 117 GLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPiAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLi 196
Cdd:PRK08377 123 GMIATGDIFNLFVFMEITAITAYALTAYNKTGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGTI- 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 197 lNNRVNLLFLTLcaflLFVGPIAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLPLFIVIP---SIMY 272
Cdd:PRK08377 201 -DPTVAQVGLAL----LIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANgwsSVLK 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 273 IISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMea 349
Cdd:PRK08377 275 LVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITL-- 352
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 528791148 350 ivgyspdKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEIL 401
Cdd:PRK08377 353 -------GGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRII 397
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
1-453 |
6.38e-28 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 117.74 E-value: 6.38e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 1 LLGVGLLLFPIATKNLRRMwtflsIFLLSIVMIFSLYLSIQQIFLscihqnVWSWTINNEFSFEFgYFIDPLTSIMSILI 80
Cdd:TIGR01770 12 LGAFILLLYGLFYSRKKRN-----PLLLKNLSYIVLLSALVSLFL------TLQYAAYLFTGFSF-FIVDNFALLIKLIL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 81 TTVGILVLIYSDNYMSHDQ-GYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAF 159
Cdd:TIGR01770 80 LLSTLLTFFFALSYLSKEKiNKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYF 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 160 VTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILNNrvNLLFLTLcaFLLFVGPIAKSAQFPLHVWLPDAMEG-PT 238
Cdd:TIGR01770 160 ILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNI--SLLLLGI--VLILVGLLFKLSAVPFHMWVPDVYEGaPT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 239 PISALIHAATMVAA-GIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG 317
Cdd:TIGR01770 236 PVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAG 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 318 S---YRSALFHLITHAYSKALLFlgsgSIIHSMEAIVGYSPDksqNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACF 394
Cdd:TIGR01770 316 TlegIKAVLFYIFIYALMSLGAF----GVLSLLRSYKDEWIE---YISDFAGLFKTNPILAILILIFMFSLAGIPPLAGF 388
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 528791148 395 WSKDEILnDSLLFSPIF--AIIACSTAGLTAFYMFRLYLLTFEGHLNTYFLNYSGKKSSSF 453
Cdd:TIGR01770 389 FGKFYVF-FALLKSGLYwlAVIAVLTSVIGAFYYLRVVKVMYFDKPERRIPSNPQSKAQSL 448
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
70-436 |
3.99e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 112.35 E-value: 3.99e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 70 DPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRp 149
Cdd:PRK07691 76 DMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK- 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 150 IAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILNNRVnllFLTLCAFLLFVGPIAKSAQFPLHVW 229
Cdd:PRK07691 155 IQLRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTG---LITVVAILFLFVFATKAGLFPLYFW 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 230 LPDAMEGP-TPISALIhAATMVAAGIFLVARLLPLFIV--IPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQ 306
Cdd:PRK07691 232 LPGSYYAPpIAIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIA 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 307 LGYMMLALGMG---SYRSALFHLITHAYSKALLFLgsgsIIHSMEAIVGYSPDKSqnmilMGGLTKHVPITKTAFLIGTL 383
Cdd:PRK07691 311 VGVILVGVAMMtesGMIGAIYYLIHDMIVKAALFL----LIGIMIKITGTTDLKK-----MGGLIKRYPVLGWMFFIAAL 381
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 528791148 384 SLCGIPPLACFWSKDEILNDSLLF-SPIFAIIACSTAGLTAFYMFRLYLLTFEG 436
Cdd:PRK07691 382 SLAGIPPLSGFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWG 435
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
24-434 |
1.86e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 107.66 E-value: 1.86e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 24 SIFLLSIVMIFSLYLSIQQIFLSCIHQNVWSwtiNNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLR 103
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVSLNFLS---FGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 104 FFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTrPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSF 183
Cdd:MTH00063 78 LNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGS 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 184 efqdlfeifnnlilnnrvnllfLTLCAFLLFVGpIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlLPL 263
Cdd:MTH00063 157 ----------------------FLCCLFFFLIV-FTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDY 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 264 FIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSI 343
Cdd:MTH00063 213 LLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 344 ihsmeaIVGYSPDKSQNMILMGGLTKHVPITKTAFLIgtLSLCGIPPLACFWSKDEILND--SLLFSPIFAIIACSTAGL 421
Cdd:MTH00063 293 ------MSGSGGSQSSNCVYSSILYGSWNLFYLFLLV--LGLSGVPFIGVFFSKHFLLSSfsSVVFNVSLLLVVILCVFL 364
|
410
....*....|...
gi 528791148 422 TAFYMFRLYLLTF 434
Cdd:MTH00063 365 SYLYSFRLCLILF 377
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
69-367 |
1.71e-23 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 104.73 E-value: 1.71e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 69 IDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGF--FNTSMLGLvtSSNLIQVYFFWELVGMCSYLLIGFWF 146
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGATLLGLTLLIGLNK 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 147 TRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGsfEFQDLFEIFNNLILnnRVNLLFLTLCAFLLFVGPIAKSAQFPL 226
Cdd:PRK08601 148 GWKVAREAAKISGMLFLISWLALALAIVWLFIATG--EWQLTSVLSNENLA--QLGTWEKTGINLLLILAVMIPAAQWPF 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 227 HVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLFI-VIPSImyIISLIGIITVLLGATLALAQKDIKRGLAYSTMS 305
Cdd:PRK08601 224 QRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHdDIAQI--LLLIFASISVLIGTGISLVQVDYKRQLVGSTMA 300
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 528791148 306 QLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMILMGGL 367
Cdd:PRK08601 301 QMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFNIVKQANEKKSYLWIVVGRV 362
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
69-397 |
5.98e-23 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 103.44 E-value: 5.98e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 69 IDPLTSIMSILITTVGILVLIYSdnYMSHDQG-YLRFFAYMGffntSMLGLVTSSNLIQVYFFWELVGMCSYLLIgfWFT 147
Cdd:PRK12668 65 VDKLSRVFGLIFGIMAFIGVIYA--LHVKDPGqHVAALLYVG----SALGAVFAGDLLTLFVFWELMAFTSTFLV--WAR 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 148 R-PIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFqDLFEIFNnlilnnrvnllflTLCAFLLFVGPIAKSAQFPL 226
Cdd:PRK12668 137 GtKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLG-------------GTAAWLILIGFGVNAAFPPL 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 227 HVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFivipsimYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQ 306
Cdd:PRK12668 203 HAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGT-------ELLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQ 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 307 LGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmeaiVGYSpdksqNMILMGGLTKHVPITKTAFLIGTL 383
Cdd:PRK12668 276 VGYMVAGIGIGTalaINGAVAHAFNHILYKGLLFMSAGAVLYR----TGTE-----KLTELGGLYRSMPLTALFCLVGAL 346
|
330
....*....|....
gi 528791148 384 SLCGIPPLACFWSK 397
Cdd:PRK12668 347 SISAFPLFSGFVSK 360
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
2-434 |
7.71e-21 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 96.17 E-value: 7.71e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 2 LGVGLLLfpIATKNLRRMWTFLSIFLLSIVMIFSLYLSIQQIFLSCIHQNVWSWtinnEFSFEFGYFIDPLTSIMSILIT 81
Cdd:PRK12663 14 LLCGLVL--VFLRNRDRLQRYLAIGTLTILTLISLALLIYVQRHGPITLDFGGW----LPPFGIQFTGDSLSALMVTTAS 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 82 TVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPiAANACQKAFVT 161
Cdd:PRK12663 88 FVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQERE-QLRGAIKYVVL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 162 NRVGDFGLLLGILGLYWITGSFEFQDLfeifnNLILNNRVNLLFLTLCAFLLFVGPIAKSAQFPLHvWLPDAMEGP-TPI 240
Cdd:PRK12663 167 NLIGSWLFLLGIGLLYGTFGTLNMAHI-----AMRLNDMGDTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPnTEV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 241 SALIhAATMVAAGIFLVARLLP-LFIVIPSIMY-IISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS 318
Cdd:PRK12663 241 AALF-AALLTKVGIYALIRVFTlLFPQERELLHpLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGT 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 319 Y---RSALFHLITHAYSKALLFLGSGSIIhsmeAIVGYSPDKSqnmilMGGLTKHVPITKTAFLIGTLSLCGIPPLACFW 395
Cdd:PRK12663 320 PagiNGAIFYLVHDMVVKTALFLIAGSLV----RLTGYRSLQY-----LGGLYRKEPLFGALFLILIFAIGGLPPFSGFW 390
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 528791148 396 SKDEILNDSL-LFSPIFAIIACSTAGLTAFYMFRLYLLTF 434
Cdd:PRK12663 391 GKVLLVQGALdNGAYILLALMLITSLITMYSLFRIFFLAY 430
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
69-429 |
1.11e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 95.96 E-value: 1.11e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 69 IDPLTSIMSILITTVGILVLIYSdNYMSHDQ----GYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGF 144
Cdd:PRK12662 74 VDILSATMLVLVNFIAVMSVLYG-IYPNRKEisvnKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAM 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 145 WFTRPiAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILNNRVNLLFLtlcafLLFVGPIAKSAQF 224
Cdd:PRK12662 153 GRDKK-ALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVL-----FIMVGLFIKAALF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 225 PLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL------PLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKR 297
Cdd:PRK12662 227 PFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKR 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 298 GLAYSTMSQLGYMMLALGMGSYR---SALFHLITHAYSKALLFLGSGSIIHsmeaivGYSPDKSQNMIlmgGLTKHVPIT 374
Cdd:PRK12662 306 IFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISY------HFGTTKLEDCL---NLWKSMPKI 376
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 528791148 375 KTAFLIGTLSLCGIPPLACFWSKDEILN---DSLLFSPIFAIIACStaGLTAFYMFRL 429
Cdd:PRK12662 377 TLAFVLLSLSLIGMPPTSGFVAKWYILDafiKSNAWIGLVVLLVGS--GLSVIYVWKI 432
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
206-397 |
1.32e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 89.64 E-value: 1.32e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 206 LTLCAFLLFVGPIaKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLL 284
Cdd:PRK12665 209 TALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVV 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 285 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNM 361
Cdd:PRK12665 287 GILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVGLI----ERQAG-----SSSL 357
|
170 180 190
....*....|....*....|....*....|....*.
gi 528791148 362 ILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSK 397
Cdd:PRK12665 358 RRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGK 393
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
4-445 |
2.44e-18 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 88.62 E-value: 2.44e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 4 VGLLLFPIATKNLRRMWTFLS--IFLLSIVMIFSLYLSIQQIFLSCIHQnvWSWTINneFSFEFGyfIDPLtSIMSILIT 81
Cdd:PRK07363 16 IGFFPGNLPSARLRQITLVFAvlVLAWSLFLLTQFDLSDPGMQFQEYLP--WNEPLG--LSYSLG--VDGL-SLPLLVLN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 82 TVGILVLIYSDNYMSHDQGYlrFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPiAANACQKAFVT 161
Cdd:PRK07363 89 SLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-RGYASIKFLIY 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 162 NRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILNNRVNLLFLTLCAFLLfvgpiaKSAQFPLHVWLPDAMEGPTPIS 241
Cdd:PRK07363 166 TAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILLTGLLLGFGI------KIPLVPLHTWLPDAYTEASPAV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 242 ALIHAATMVAAGIFLVARL-LPLFiviPSIMYIIS----LIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM 316
Cdd:PRK07363 240 AILLGGVLAKLGTYGLLRFgLQLF---PQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAA 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 317 GSYRS---ALFHLITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNMILMGGLTKHV---PITKTAFLIGTLSLCGIPP 390
Cdd:PRK07363 317 GTQLSllgAVAQMISHGLILALLFHLVGIV----ERKVG-----TRDLDVLNGLMNPIrglPLTSALLVLAGMASAGIPG 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 528791148 391 LACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRLYLLTFEGHLNTYFLNY 445
Cdd:PRK07363 388 LVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKLAYY 442
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
119-436 |
4.90e-17 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 84.88 E-value: 4.90e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 119 VTSSNLIQVYFFWELVGMCSYLLIGfwftrpiaanaCQKA----FVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNN 194
Cdd:PRK08042 107 VIASNLGMFVVMAEIMALCAVFLTG-----------NSKEgklwFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQ 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 195 LILNNRVNLLFLTlcAFLLFVGPIaksaqfPLHVWLPDAMEGPTPISALIHAATMVAAGIF------LVARLLPLFIVIp 268
Cdd:PRK08042 176 LPLGSDIWLLGVI--GFGLLAGII------PLHGWVPQAHANASAPAAALFSTVVMKIGLLgiltlsLLGGNAPLWWGV- 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 269 simyIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG--------------SYRSALFHLITHAYSKA 334
Cdd:PRK08042 247 ----ALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKS 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 335 LLFLGSGSIIHSmeaiVGYspdksQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEI------LNDSLLF- 407
Cdd:PRK08042 323 VLFLGAGSVWFR----TGH-----RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFv 393
|
330 340 350
....*....|....*....|....*....|...
gi 528791148 408 ----SPIFAIIACSTAGLTAFYMFRLYLLTFEG 436
Cdd:PRK08042 394 arllGPLLAVGLAITGALAVMCMAKVYGVTFLG 426
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
104-444 |
2.20e-16 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 82.44 E-value: 2.20e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 104 FFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFW--FTRPIAAnacQKAFVTNRVGDFGLLLGILGLYWITG 181
Cdd:PRK06473 109 YYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWggQRRGYAA---TKFLLYTAISGILILVSFLGLVWLSG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 182 SFEFQDLFEIFNNLILNNRVNLLFLTLCAFLLfvgpiaKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVAR- 259
Cdd:PRK06473 186 ASSFDYEPLRSHTLPLSTQLLLLAPILVGFGI------KIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRf 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 260 ---LLPLFIVIpsIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSK 333
Cdd:PRK06473 259 gvgLFPEAWVY--LAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQMISHGLIS 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 334 ALLFLGSGsiihsmeaiVGYSPDKSQNMILMGGL---TKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFSPI 410
Cdd:PRK06473 337 ALLFLLVG---------VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPV 407
|
330 340 350
....*....|....*....|....*....|....
gi 528791148 411 FAIIACSTAGLTAFYMFRLYLLTFEGHLNTYFLN 444
Cdd:PRK06473 408 QTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSN 441
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
67-426 |
4.34e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 81.34 E-value: 4.34e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 67 YFIDPLtSIMSILITTVG-ILVLIYSDNYMSH-------DQGYLRFFaYMGFfntSMLGLVT-----SSNLIQVYFFWEL 133
Cdd:PRK08676 59 LFIDHL-GIFVVLIASVVfILAALYARGYVDHllsngelDPENLKVF-YLGF---NLLLSVItfaffSDNLALFWIFAEL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 134 VGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWI-----TGSFEFQDLFEIFNNLilnnrvNLLFLTL 208
Cdd:PRK08676 134 TTVFSAMLIAILSARENIDAALKYIFIASTAMIFAFIGLIFLFSLTrqalgTGTLNWTELAAHASLL------SPSVLGA 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 209 CAFLLFVGPIAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFI---VIPSIMYIISLIGIITVLL 284
Cdd:PRK08676 208 SFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGLGIFSIAV 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 285 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGsIIHSMeaivgYSPDKSQNm 361
Cdd:PRK08676 287 AAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ-----YRSDRFDR- 359
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 362 ilMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFSP-----IFAIIACSTAGLTAFYM 426
Cdd:PRK08676 360 --IFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVwlvlaVLLLLLLAASSFAIFLL 427
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
55-397 |
8.70e-16 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 80.48 E-value: 8.70e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 55 WTINNEFSFeFGYFI-DPLTSIMSILITTVGILVLIYSDNYMshDQGYLRFFAYMGFFNTSMLG---LVTSSNLIQVYFF 130
Cdd:PRK02504 62 WDNPNPISF-LGSFNaDNLSIAFRAIIALSTLVTLLMSWRYV--EQSGTPLGEFAAILLTATLGgmfLSGATELVMIFIS 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 131 WELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFefQDLFEIFNNLIlnnrVNLLFLTLCA 210
Cdd:PRK02504 139 LETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGS--TQLSAIALALI----TSPSLGLALA 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 211 FLLFVGPIA-KSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLVARLLPLfiVIPSI----MYIISLIGIITVLL 284
Cdd:PRK02504 213 LVFVIAGIAfKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLLVT--AFPSFdeqwKLLFTALAILSMVL 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 285 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITH------AYSKALLF-LGSGSiihsmEAIVGYS 354
Cdd:PRK02504 290 GNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAYlfmnlgAFACVILFsLRTGT-----DQISDYA 364
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 528791148 355 pdksqnmilmgGLTKHVPITKTAFLIGTLSLCGIPPLACFWSK 397
Cdd:PRK02504 365 -----------GLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
22-397 |
1.57e-15 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 79.66 E-value: 1.57e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 22 FLSIFLLSIVMIF-------SLYLSIQQIFLScIHQNVWSWTINNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNY 94
Cdd:CHL00049 24 FGLILLLMIDLTSdqkdipwLYFISSTSLVMS-ITALLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 95 MSHDQGYLRFFayMGFFNTSMLG---LVTSSNLIQVYFFWELVGMCSYLLIGFwFTRPIAAN-ACQKAFVTNRVGDFGLL 170
Cdd:CHL00049 103 IECTEMAITEF--LLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY-TKKDVRSNeATMKYLLMGGASSSILV 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 171 LGILGLYWITGSfEFQdLFEIFNNLILNNRVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEG-PTPISALIhAATM 249
Cdd:CHL00049 180 YGFSWLYGLSGG-EIE-LQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTS 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 250 VAAGIFLVARLLPlfIVIPSIM----YIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFH 325
Cdd:CHL00049 257 KVAASALATRIFD--IPFYFSSnewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYAS 334
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 528791148 326 LITHAYSKALLFLGSGSIIHSMEAIVGyspdkSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSK 397
Cdd:CHL00049 335 MITYMLFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
67-397 |
2.10e-15 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 79.31 E-value: 2.10e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 67 YFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLrFFAYMGFfnTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWF 146
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYV-FLMLMGL--ASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASG 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 147 TRPiAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLfeifNNLILNNRVNLLFLtLCAFLLFVGPIAKSAQFPL 226
Cdd:PRK06277 145 TEE-AYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDI----HNALLVNPTSPVIY-GGLLLLIFGLLYGSGLPPF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 227 HVWLPDAMEGPTP-ISALIHA---ATMVAAGIFLVaRLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYS 302
Cdd:PRK06277 219 HTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYH 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 303 TMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMILMGGLTKHVPITKTAFL 379
Cdd:PRK06277 298 AISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVAFMVL 368
|
330
....*....|....*...
gi 528791148 380 IGTLSLCGIPPLACFWSK 397
Cdd:PRK06277 369 CAKLAISGVPPFNGFQSK 386
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
114-416 |
5.70e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 76.99 E-value: 5.70e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 114 SMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQdlfeiFN 193
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLS-----YI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 194 NLILNNRVNL--LFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLvarllpLFIVIPSI 270
Cdd:MTH00196 80 NLVLNSGQSFssVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFS------ILVSIGLN 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 271 MYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLgsgsiihsm 347
Cdd:MTH00196 152 VNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESiqaSLVYLFIYIIMSICVFS--------- 222
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 528791148 348 eAIVGYSPDKSQnMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIAC 416
Cdd:MTH00196 223 -IILALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLA 289
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
220-415 |
1.25e-14 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 76.99 E-value: 1.25e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 220 KSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFLV----------ARLLPLFIVIPSIMYIIslIGIITVLLGATL 288
Cdd:PRK12561 198 KLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLKmggyalirfnVQMLPDAHVYFAPALAI--LGVVNIIYGALN 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 289 ALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRS-----ALFHLITHAYSKALLFLGSGsiihsmeaiVGYSPDKSQNMIL 363
Cdd:PRK12561 269 AFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAMLQMISHGLIAAALFFLTG---------VTYERTHTLSIPN 337
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 528791148 364 MGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEI---LNDSLLFSPIFAIIA 415
Cdd:PRK12561 338 MGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgITSSDVYSSTFRTIT 392
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
23-401 |
1.93e-14 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 76.21 E-value: 1.93e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 23 LSIFLLSIVMIFSLYLSIQQIFLScIHQNVWSWTINNEFSFEFGYFIdpltsIMSILITTVGILVLIYSDNYMSHDQGYL 102
Cdd:MTH00199 24 LSTLKLSIGVLLLIGLIVELNSLN-LFQSDKVLDGTNGLLLTNSWII-----ISKIIIIIGSISILLMGSGETILSEGGQ 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 103 RFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGS 182
Cdd:MTH00199 98 SSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGE 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 183 FEFQDlfeifNNLILNNRVNLLFLTLCafLLFvgpiaKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFlvarll 261
Cdd:MTH00199 178 TSIQG-----INSILTGDVGKILITIS--LLF-----KLSAAPFHMWAPDVYEGaPTITTALL--ATVPKIGVF------ 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 262 PLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHayskALLFL 338
Cdd:MTH00199 238 SILVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESiqaSLIYMIIY----VIMSI 313
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 528791148 339 GSGSIIHSMEAIVGYspdksqnMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEIL 401
Cdd:MTH00199 314 CSFSIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
55-105 |
1.96e-13 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 64.76 E-value: 1.96e-13
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 528791148 55 WTINNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFF 105
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
210-425 |
4.40e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 65.64 E-value: 4.40e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 210 AFLLFVGPIAKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLLPLF----------IVIPSIMYiislIG 278
Cdd:PRK12666 213 AALLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLfgpeagasagFGQDWLLP----GG 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 279 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR---SALFHLITHAYSKALLFL-----------GSGSII 344
Cdd:PRK12666 287 LATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrgaAADRLA 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 345 HSMEAivgYSPDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSK----DEILNDS-----------LLFSP 409
Cdd:PRK12666 367 VTPEL---YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKfallQALLNPPgagaawwlwalVLLSG 443
|
250
....*....|....*.
gi 528791148 410 IFAIIACSTAGLTAFY 425
Cdd:PRK12666 444 LAALIALTRAGIRLFW 459
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
75-427 |
5.30e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 65.33 E-value: 5.30e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 75 IMSILITTVGILVLIYSDNYMSHDqgylrFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANA 154
Cdd:MTH00226 109 ILTGFIVPCSILISWHSVKYLTKS-----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQA 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 155 CQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIfNNLILNNRVNLLFLTLcafllFVGPIAKSAQFPLHVWLPDA- 233
Cdd:MTH00226 184 AYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQKWIFLGI-----FLAMAVKIPIFPFHIWLPKAh 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 234 MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMML 312
Cdd:MTH00226 258 VEAPVAGSVLLAGILLKLGGYGLVRLSWPILpLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSI 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 313 AL---GMGSYRSALFHLITHAYSKALLFLgsgsiihsmEAIVGYSPDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIP 389
Cdd:MTH00226 338 TLvthDIIGLTGSIFIMLAHGIVSSLLFI---------LVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVP 408
|
330 340 350
....*....|....*....|....*....|....*...
gi 528791148 390 PLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMF 427
Cdd:MTH00226 409 PSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
220-429 |
1.99e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 63.72 E-value: 1.99e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 220 KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVArllplfIVIPSIMYIIslIGIITVLLGATLALAQKDIKRG 298
Cdd:MTH00198 312 KLAAAPFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTS------LVITSKLLLS--VAIISLVVGAFGALNQTRIKRL 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 299 LAYSTMSQLGYMMLALGMGSYRSaLFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMILMGG------------ 366
Cdd:MTH00198 384 LAYSGIGHIGFILIGVSAGTYES-LQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGSFGNynlvrrlvdlti 462
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 528791148 367 LTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFS-----PIF---AIIACSTAGLTAFYMFRL 429
Cdd:MTH00198 463 LSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAfssslSIYylvALFAIICTCISAFYYIRI 533
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
23-391 |
1.21e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 58.26 E-value: 1.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 23 LSIFLLSIvmIFSLYLSIQQIFLSCIHQNVWSWTINNEFSFEFGYFidpltsimSILITTVGILVLIYSDNYmSHDQGYL 102
Cdd:PRK06459 6 LPVFLISI--LLSIFNKKASYILTMISSIILLITSIYEYNGVLSFF--------SIISTIVWILASLYSIEY-DHYGKWL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 103 RffAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGfwftrpIAANACQKAFVTNRVGDFGLLLG---ILGLYWI 179
Cdd:PRK06459 75 S--SLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIA------LTKKNKRPAFVFMAFGELSTVLIlagFAWAFII 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 180 TGSFEFQdlfeifnnlILNNRVNLLFLTLcafllfvGPIAKSAQFPLHV--WLPDAMEGPTPISALIHAATMVAAGIFLV 257
Cdd:PRK06459 147 SGTTNFS---------YLPSPVPLILASF-------GFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGI 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 258 ARLLPLFIVIPS--IMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM--------GSYR-----SA 322
Cdd:PRK06459 211 LKMTILTQTIPIgyFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymvtkqliTSIEhfsliTV 290
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 528791148 323 LFHLITHAYSKALLFLGSGsiiHSMEAIVGYSPDKSQNMILMGGltkhvpitktafLIGTLSLCGIPPL 391
Cdd:PRK06459 291 ILYSFAHSVAKTGLFLSSG---LQEKQSITYSKKIRNRWIELGL------------TLLASSLSGLLPN 344
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
224-439 |
1.24e-08 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 57.79 E-value: 1.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 224 FPLHVWLPDAMEGPTpisALIHaatMVAAGIFLV----------ARLLPLFIVIPSIMYIIslIGIITVLLGATLALAQK 293
Cdd:PRK02546 230 VPLHTWLPDAHGEAT---APVH---MLLAGILLKmggyallrmnAGMLPDAHAQFAPLLIV--LGVVNIIYAALTSFAQR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 294 DIKRGLAYSTMSQLGYMMlaLGMGSYRS-----ALFHLITHAYSKALLFLgsgsiihsmeaIVGYSPDKSQNMIL--MGG 366
Cdd:PRK02546 302 NLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLFF-----------LVGATYDRTHTLMLdeMGG 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 367 LTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEI---LNDSLLFSPIFAIIACSTAG----LTAFYMFRLYLLTFEGHLN 439
Cdd:PRK02546 369 VGQKMRKMFAMWTACSLASLALPGMSGFVAELMVfvgFATSDAYTLPFRVVVVFLAAvgviLTPIYLLSMLREIFFGPEN 448
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-446 |
2.11e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 56.87 E-value: 2.11e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 3 GVGLLLFPIATKNLRRMWTFLSIFLLSIVMIFSLYLSIQQIFLScihqnvwswtinnefSFEFGYFIDPLTSIMSILITT 82
Cdd:MTH00206 6 LIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWS---------------FSNLYLSYDPLSSPLVILSCW 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 83 VGILVLIYSDNYMsHDQGYLRFFAYMGFFNTSMLGLV---TSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAF 159
Cdd:MTH00206 71 LLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 160 VTNRVGDFGLLLGILGLYWITGSFEFqdLFEIFNNLILNNRVNLLFLTLCAFLlfvgpiAKSAQFPLHVWLPDA-MEGPT 238
Cdd:MTH00206 150 FYTLIGSLPLLIALLFLQNSLGSLSL--YILYFSKLTTWNNNLWWLACILAFL------VKLPLYGVHLWLPKAhVEAPV 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 239 pisalihAATMVAAGIFL------VARLLPLFI-VIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMM 311
Cdd:MTH00206 222 -------AGSMVLAGVLLklggygMMRIILILGpSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVT 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 312 LALGMG---SYRSALFHLITHAY-SKALLFLGSgsiihsmeaiVGYSPDKSQNMILMGGLTKHVPITKTAFLIGTLSLCG 387
Cdd:MTH00206 295 AGILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLG 364
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 528791148 388 IPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRLYLLTFEGHLNTYFLNYS 446
Cdd:MTH00206 365 LPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLS 423
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
202-459 |
5.18e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 55.28 E-value: 5.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 202 NLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfiviPSIMYIISLIGIIT 281
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDL----YWLAYLLCVISVLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 282 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNM 361
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 362 ILMGGLtkhvpitktafligtLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTA--FYMFRLYLLTfeghLN 439
Cdd:MTH00144 235 SIISLL---------------LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISlfFYLSVFFSSF----LS 295
|
250 260
....*....|....*....|
gi 528791148 440 TYFLNYSGKKSSSFYSLSLW 459
Cdd:MTH00144 296 SSKSKKSNSSKVLNSSIISL 315
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
225-403 |
8.01e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 54.83 E-value: 8.01e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 225 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLvarllpLFIVIPSI-MYIISLIGIITVLLGATLALAQKDIKRGLAYST 303
Cdd:MTH00112 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLTL------LLMTSNSLnPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSS 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 304 MSQLGYMMLALGMgSYRSALFHLITHAYSKALLFLgsgsIIHSMEAIvgyspdKSQNMILMGGLTkhvPITKTAFLIGTL 383
Cdd:MTH00112 184 IAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTTSTK------TLKDMMTSWTKS---PTLNTTLMLTLL 249
|
170 180
....*....|....*....|
gi 528791148 384 SLCGIPPLACFWSKDEILND 403
Cdd:MTH00112 250 SLAGLPPLTGFMPKWLILQE 269
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
23-389 |
1.22e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 54.68 E-value: 1.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 23 LSIFLLSIVMIFSLYLSIQQIFLSCIhqnvwSWTINNEFSFEFGYFIDPLTSI------MSILITTVGILVLIYSDNYMS 96
Cdd:MTH00204 37 LAILFSTLVLWGAFDGEGQFQFINLI-----EWIISPTLNFQWGPLVFAVDGVslffilLTTLLIPICILISWKSIKFLF 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 97 HDqgylrFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGL 176
Cdd:MTH00204 112 KE-----FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQL 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 177 YWITGSFEFQDLfeifnnLILNNRVNLLFLTLCAFllFVGPIAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIF 255
Cdd:MTH00204 187 YSITGTTDYQIL------LNIKLPLSIQKWLLVGF--FLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYG 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 256 LVARLLPLFIVIPSIMY-IISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRSALFHLITHAY 331
Cdd:MTH00204 259 FLRFSWPLFPAASEYFApLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGF 338
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 528791148 332 SKALLFLGSGSIihsmeaivgYSPDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIP 389
Cdd:MTH00204 339 VSSALFIAVTFL---------YERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFP 387
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
188-438 |
4.09e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 53.00 E-value: 4.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 188 LFEIFNNLILNNRVNLLFLTLC--AFLLfvgpiaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VA 258
Cdd:MTH00068 178 LLELMSPMQLMTYTNKIWWLACllAFMV------KMPLYGLHLWLPKAhVEAPI-------AGSMILAAVLLklggygIL 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 259 RLLPLFI-VIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAY-SK 333
Cdd:MTH00068 245 RISILLTpLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSS 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 334 ALLFLgsgsiihsmeAIVGYSPDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSkdEILNDSLLF--SPIF 411
Cdd:MTH00068 325 ALFCL----------ANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWG--ELTIMVSLFnwSNWT 392
|
250 260
....*....|....*....|....*..
gi 528791148 412 AIIACSTAGLTAFYMFRLYLLTFEGHL 438
Cdd:MTH00068 393 ILITGLGTLITAAYTLYMFLMTQRGPL 419
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
201-452 |
5.02e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 52.28 E-value: 5.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 201 VNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfivipSIMYIISLIGII 280
Cdd:MTH00200 86 ISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPA-----LNSNILLLLGLL 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 281 TVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLgsgsiihsmeaivgYSPDKSQN 360
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL--------------LNLLNSTK 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 361 MILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFS-PIFAIIACSTAGLTAFYMFRL-YLLTFEGHL 438
Cdd:MTH00200 227 INSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGlFIYATILLLGSLLSLFFYLRLsYLTLLTLSP 306
|
250
....*....|....
gi 528791148 439 NTYFLNYSGKKSSS 452
Cdd:MTH00200 307 NQINMMSSWRTKSN 320
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
202-458 |
9.30e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 51.21 E-value: 9.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 202 NLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIV--IPSIMYIISLIGI 279
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFL---------LATWQKLAPLLILafNSSSFMGLLICSV 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 280 ITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQ 359
Cdd:MTH00197 145 LSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 360 NMILmggltkhvpitktaFLIGTLSLCGIPPLACFWSKDEILNdSLLFSPIFAIIACSTAG--LTAFYMFRLYLLTFegh 437
Cdd:MTH00197 225 NLVF--------------LGLSFLSLGGLPPLSGFFLKWLILT-SLLSSNISLITFMLILStcFSLYYYLSLAYKSL--- 286
|
250 260
....*....|....*....|.
gi 528791148 438 LNTYFLNYSGKKSSSFYSLSL 458
Cdd:MTH00197 287 ILSNWMINFLMKINLLYSGLF 307
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
208-444 |
9.70e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 51.88 E-value: 9.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 208 LCAFLLfvgpiaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL----PLFIVIPSIMYIISLIGIItvl 283
Cdd:MTH00127 201 LLAFLV------KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMvmldPLTKELSYPFIILALWGII--- 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 284 LGATLALAQKDIKRGLAYSTMSQLGYM---MLALGMGSYRSALFHLITHAYSKALLFLgsgsiihsmEAIVGYSPDKSQN 360
Cdd:MTH00127 272 MTGSICLRQTDLKSLIAYSSVSHMGLVaggILIQTPWGFTGALILMIAHGLTSSALFC---------LANTNYERTHSRT 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 361 MILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRLYLLTFEGHLNT 440
Cdd:MTH00127 343 MLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPD 422
|
....
gi 528791148 441 YFLN 444
Cdd:MTH00127 423 HIIA 426
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
67-434 |
1.30e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 51.32 E-value: 1.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 67 YFIDPLTSIMSILITTVGILVLIYSDN--------YMSHDQGYLrFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCS 138
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 139 YLLIGFWfTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIfnnliLNNRVNLLFLTLCAFLLFVGPI 218
Cdd:PRK06591 152 YVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAY-----LQEHTNSRIITIAIGFFLIGAI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 219 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSI----MYIISLIGIITVLLGATLALAQKD 294
Cdd:PRK06591 226 LKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYETIktaiTNFIRPIALATLIIAPYFAYQAKN 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 295 IKRGLAYSTMSQLGYMMLALGMGSYRSALFHLithayskaLLFLGSGSIIHSMEAIVGYSPDKSQNMILmggltkhvpit 374
Cdd:PRK06591 306 FKNIIIYSCFTQIGYVFLLYVTENGIIILPSL--------LLADSINKIALFLIDAYNESYKREPNKVL----------- 366
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 528791148 375 ktaFLIGTLSLCGIPPLACFWSKDEI----LNDSLLFSpiFAIIACSTAGlTAFYMFRLYLLTF 434
Cdd:PRK06591 367 ---IIIAIICSCGLPISPLFFIKVNIlellLTQNLLLD--FIIILLSSVG-SLFYHYKMVLLLF 424
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
6-441 |
2.48e-06 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 50.51 E-value: 2.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 6 LLLFPIATKNLRRMWTFLSIFLLSIVMIFSLYLSIQQIFLscihqnvwswtiNNEFSFefgyfIDPLTSIMSILITTVGI 85
Cdd:MTH00014 11 LLLLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSM------------FTESLS-----SDMLSAPLITLTLWITA 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 86 LVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANAcqkafvtnrvg 165
Cdd:MTH00014 74 LMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQA----------- 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 166 dfgllLGILGLYWITGSFEFqdLFEIFNNLILNNRVNLL----------FLTLCAFLLFVGPIAKSAQFPLHVWLPDA-M 234
Cdd:MTH00014 143 -----SFYLMIYTVTASLPL--LMSILLIFYTNNSLSMLmssmeppsiyLMNLWWLITILAFMVKMPLYTVHLWLPKAhV 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 235 EGPTpisalihAATMVAAGIFL------VARLLPLFIVI-----PSIMYIISLIGIITVLlgatLALAQKDIKRGLAYST 303
Cdd:MTH00014 216 EAPV-------AGSMILAGILLklggygLLRMSSLFMHInkslsAPFSSISLVGAVITSL----ICIRQPDLKSLIAYSS 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 304 MSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMILMGGLTKHVPITKTAFLI 380
Cdd:MTH00014 285 VGHMGLMTAGIMSNTswgWQGALAMMIAHGLCSSALFALANMT---------YETTHTRSLFLTKGLLSLFPTMTMWWFL 355
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 528791148 381 GTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRLYLLTFEGHLNTY 441
Cdd:MTH00014 356 LSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFLYTSTQHGSPPSF 416
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
207-413 |
6.54e-06 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 48.77 E-value: 6.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 207 TLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIhaatmvAAGIFLVARLLPLFIVIPSI-MYIISLIGIITVLLG 285
Cdd:MTH00041 92 TLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLI------IATWQKIAPLILLISISNLLnSNILILCGILSVLVG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 286 ATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEAIvgyspdksqnmilmG 365
Cdd:MTH00041 166 GWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHL--------------N 231
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 528791148 366 GLTKHVPITKTAFLIGTLSLCGIPPLACFWSK-----DEILNDSLLFSPIFAI 413
Cdd:MTH00041 232 KLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCLIQNNSILISIILII 284
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-414 |
7.07e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 48.96 E-value: 7.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 201 VNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEgptpiSALIHAATMVAAGIFLVARLLPLFIVipSIMYIISLIGII 280
Cdd:PRK12664 138 QNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYP-----AASNFGIIVLSLFTTKVAALVLLLFF--SGEEILLFLGII 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 281 TVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSA-----LFHLITHAYSKALLFLGSGSIIHSMEAIvgysp 355
Cdd:PRK12664 211 TAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVaigilILQIVLSVVYQTLLFMVADSVINRTRKF----- 285
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 528791148 356 dksqNMILMGGLTKhVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAII 414
Cdd:PRK12664 286 ----NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLY 339
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
220-378 |
1.24e-04 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 44.94 E-value: 1.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 220 KSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVA----------RLLP--LFIVIPSIMyiisLIGIITVLLGA 286
Cdd:CHL00011 224 KLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMgayglirinmELLPhaHSIFSPWLV----IVGAIQIIYAA 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 287 TLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSY-----RSALFHLITHAYSKALLFLgsgsiihsmeaIVGYSPDKSQNM 361
Cdd:CHL00011 293 STSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGAILQIISHGFIGAALFF-----------LAGTSYDRIRLV 359
|
170
....*....|....*....
gi 528791148 362 IL--MGGLTKHVPITKTAF 378
Cdd:CHL00011 360 YLdeMGGIAIPMPKIFTMF 378
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
210-429 |
5.22e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 42.84 E-value: 5.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 210 AFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfivipSIMYIISLIGIITVLLGATLA 289
Cdd:MTH00011 91 ALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGLGG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 290 LAQKDIKRGLAYSTMSQLGYMMLALgMGSYRSALFHLITHAYskallflgsgsIIHSMEAIVGYSPDKSQNMilMGGLTK 369
Cdd:MTH00011 166 MNQTQLRPLLAYSSIGHMGWMTMIS-VFSPSMAILYFMTYII-----------ITTPLMLLFAYLNAFSTKF--NSKISS 231
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 528791148 370 HVPITKTAFLIGTLSLCGIPPLACF---WSKDEILNDSLLFSPIFAIIACSTAGLtaFYMFRL 429
Cdd:MTH00011 232 MSQTTSMSLFIMLLSLGGLPPFTGFmpkLMAIETLTSNSMILILLVLIVGSLMNL--FYYLNL 292
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
192-456 |
7.86e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 42.52 E-value: 7.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 192 FNNLILNNRVNLLFLTLCAFLLFvgpIAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLF 264
Cdd:MTH00150 140 LISSLRKLLSSMGLWGLLVFLAF---LVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVF 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 265 IVIPSIMYIISL-IGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFlgs 340
Cdd:MTH00150 210 SLSSSSFSIFLIsLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFCSSGLF--- 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 341 gsiihsmeAIVGYSPDKSQ--NMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACST 418
Cdd:MTH00150 287 --------CLANYTYEKVHsrSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLM 358
|
250 260 270
....*....|....*....|....*....|....*...
gi 528791148 419 AGLTAFYMFRLYLLTFEGHLNTYFLNYSGKKSSSFYSL 456
Cdd:MTH00150 359 VFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLL 396
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
75-430 |
2.14e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 41.19 E-value: 2.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 75 IMSILITTVGILVLIYSDNYMSHDqgylrFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANA 154
Cdd:MTH00217 87 ILTALLTPICILISWNSIKFLIKE-----FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQA 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 155 CQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFeifnNLILNNRV-NLLFLtlcafLLFVGPIAKSAQFPLHVWLPDA 233
Cdd:MTH00217 162 SYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC----CLKIEKELqYFIFL-----GFFLSLAIKIPKIPFHIWLPQA 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 234 -MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLG--- 308
Cdd:MTH00217 233 hVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLpEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGlvt 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 309 ---------------YMMLALGMGSyrSALFHLITHAYSKallflgsgsiiHSMEAIVGYSpdksqnmilmgGLTKHVPI 373
Cdd:MTH00217 313 lgifshtiqglvaaiFLMLAHGLVS--SALFIAVTFLYER-----------HHTRLIKYYR-----------GMVITMPL 368
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 528791148 374 TKTAFLIGTLSLCGIpPLACFWSKDEIlndSLL----FSPIFAIIACSTAGLTAFYMFRLY 430
Cdd:MTH00217 369 FGILMLLLVLANASI-PLSCNFVGEFL---SLLaafeYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
188-458 |
5.04e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 39.42 E-value: 5.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 188 LFEIFNNLILNNRVNLLFLTLCAFLLFVgpiaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvarlLPLFIVI 267
Cdd:MTH00160 72 LFSIILNMLNLMLFNNISSMLINSSLLL----KLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLIL----LSYLINN 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 268 PSIMYIIsligIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLIthaYSKALLFLgsgsiihsm 347
Cdd:MTH00160 144 NFIIIII----ILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLI---YSIISLSI--------- 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 348 eaIVGYSPDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILN---DSLLFSPIFAIIACSTagLTAF 424
Cdd:MTH00160 208 --ILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQlliSNNMFFLLFILIMSSL--ITLY 283
|
250 260 270
....*....|....*....|....*....|....
gi 528791148 425 YMFRLYLLTFegHLNTYFLNYSGKKSSSFYSLSL 458
Cdd:MTH00160 284 FYLRISYSSL--MLNYNKNKWNLKKKKNKFSLIL 315
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
225-440 |
7.02e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 39.13 E-value: 7.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 225 PLHVWLPDAMEGPTPISALIHA-----ATMvaAGIFLVARLLPLFIVIpsimyiisLIGIITVLLGATLALAQKDIKRGL 299
Cdd:MTH00070 110 PFHFWLPEVLQGLDLTTGLILStwqklAPM--ALLIQISHLLNSNLLI--------IMGLLSTLIGGWGGLNQTQLRKIM 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528791148 300 AYSTMSQLGYMMLALGMgSYRSALFHLITHAYSKALLFLgsgSIIHSMeaivgyspdkSQNMILMGGLTKHVPITKTAFL 379
Cdd:MTH00070 180 AYSSIAHLGWMIIILTF-SPHLTLLNLLIYLIMTSSMFL---MLMNLN----------STNINKLSSSWSKNPTLTSMMM 245
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 528791148 380 IGTLSLCGIPPLACFWSK----DEILNDSLLfspIFAIIACSTAGLTAFYMFRL-YLLTFEGHLNT 440
Cdd:MTH00070 246 LTLLSLGGLPPTTGFIPKwlilQELTKQNLT---TLATLMALSALLSLFFYLRLsYAMSLTTSPNT 308
|
|
| |
