|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-685 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1190.85 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 1 PILLGVGLLLFPTATKNLRRMWTFLSIFFLSIVMIFSFYLSIQQIFISCIHQTVWSWTINNEFSFEFGYFIDPLTSIMLI 80
Cdd:CHL00025 19 PMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLI 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 81 LITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQKA 160
Cdd:CHL00025 99 LITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKA 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 161 FVTNRVGDFGLLLGILGLFWITGSFEFQDLFEILNNVILNNRVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPT 240
Cdd:CHL00025 179 FVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPT 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 241 PISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY***************** 320
Cdd:CHL00025 259 PISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGS 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 321 *******LITHAHSKALLFLGSGSIIHSMEAVVGYSPDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKD 400
Cdd:CHL00025 339 YRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKD 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 401 EILNDSLLFSPSFAIIAYLTAGLTAFYMFRIYLLTFEGHLNTYFINYSGKKSSSLYSISLWGKEENKKLKRNFglvPLLT 480
Cdd:CHL00025 419 EILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWGKEESKKINKLL---LLLT 495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 481 MNNRKRSSFFCKKTYKISNNISNQTFITVENFGlNTRPFYYPHESDNTILFPMLVLLLFTLFIGAIGIPFNQEGIDVDIL 560
Cdd:CHL00025 496 MNNNERVSFFSKKTYKIDGNVRNMIRSFITIFG-NKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDIL 574
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 561 SKLFTPSINLLHNNSQNFVYWVEFFINATFSVSIALFGIFIAYCLYKPFYSSLLNLTLLNSFQKWSYKRIWWQKVINFVY 640
Cdd:CHL00025 575 SKWLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINSFVKGGPKRIFLDKIINVIY 654
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 525677331 641 NWSYNRGYIDTFFKTSLTESIRGLAKQTNFFDKRIIDGITNGVRI 685
Cdd:CHL00025 655 NWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGI 699
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
2-681 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 581.21 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 2 ILLGVGLLLFPTATKNLRRMWTFLSIFFLSIVMIFSFYLSIQQIFISCIHQTVWSWTINNEFSFEFGYFIDPLTSIMLIL 81
Cdd:PRK07376 20 VLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGDFHLPMGYVIDPLGAVMLVL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 82 ITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQKAF 161
Cdd:PRK07376 100 VTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAF 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 162 VTNRVGDFGLLLGILGLFWITGSFEFQDLFEILNNVILNNRVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTP 241
Cdd:PRK07376 180 VVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDAMEGPTP 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 242 ISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY****************** 321
Cdd:PRK07376 260 ISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAY 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 322 ******LITHAHSKALLFLGSGSIIHSMEAVVGYSPDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDE 401
Cdd:PRK07376 340 SAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDE 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 402 ILNDSLLFSPSFAIIAYLTAGLTAFYMFRIYLLTFEGhlntyfiNYSGkkssslysislwgkeENKKLKRNfglvpLLTM 481
Cdd:PRK07376 420 ILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEG-------EFRG---------------NDKELQKE-----LLAA 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 482 NNRKRSSFFCKKTYKISNNISNQtfitvenfglntrpfyyPHESDNTILFPMLVLLLFTLFIGAIGIPFNQ--EGIdvdi 559
Cdd:PRK07376 473 ADAPGHHEGHHEEHGEHHHHSGS-----------------PHESPWTMTLPLVVLAVPSVLIGLLGTPWNNrfEAF---- 531
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 560 lskLFTP--SINLLHNNSqnfvyWVEFFINATFSVSIALFGIFIAYCLYkpfyssllnltllnsfqkwsykriwWQKVIN 637
Cdd:PRK07376 532 ---LHAPgeALEAAAHFE-----WGEFLILAGASVGIALIGITLASLMY-------------------------LLKKID 578
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|...
gi 525677331 638 F---------VYNWSYNRGYIDTFFKTSLTESIRGLAKQTNFFDKRIIDGITN 681
Cdd:PRK07376 579 PaaiaerfppLYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVN 631
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-683 |
1.55e-153 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 457.69 E-value: 1.55e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 1 PILLGVGLLLFPTATKNLRRMWTFLsifFLSIVMIFSFYLSIQ---QIFISCIHQTVWSWTINNEFSFEFGYFIDPLTSI 77
Cdd:COG1009 8 PLLPLLGALLAGLLGRRLGRRAAGW---LAALAPLAAFVLSLLlfpAVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 78 MLILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANAC 157
Cdd:COG1009 85 MLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 158 QKAFVTNRVGDFGLLLGILGLFWITGSFEFQDLFEILNNVIlnnrvNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAME 237
Cdd:COG1009 165 RKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIL-----SSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAME 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 238 GPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY************** 317
Cdd:COG1009 240 GPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALG 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 318 **********LITHAHSKALLFLGSGSIIHSMEavvgyspdkSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFW 397
Cdd:COG1009 320 VGAYVAALFHLLTHAFFKALLFLGAGSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFF 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 398 SKDEILN---DSLLFSPSFAIIAYLTAGLTAFYMFRIYLLTFeghlntyfinysgkkssslysislWGKEENKKLKRnfg 474
Cdd:COG1009 391 SKEAILEaalEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVF------------------------FGKPRPKTPKH--- 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 475 lvplltmnnrkrssffckktykisnnisnqtfitvenfglntrpfyyPHESDNTILFPMLVLLLFTLFIGAIGIPFNQEG 554
Cdd:COG1009 444 -----------------------------------------------PHESPWLMTLPLVVLAVLSLVLGLLLPGLLEGL 476
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 555 IDVDilsKLFTPSINLLHnnsqnfvywvEFFINATfSVSIALFGIFIAYCLYkpfyssllnltllnsfqkWSYKRIWWQK 634
Cdd:COG1009 477 LAPA---AVLGGELHLAH----------GLLLNAL-PLLLSLLGIALGYLLY------------------LKRPLPALAE 524
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 525677331 635 VINFVYNWSYNRGYIDTFFKTSLTESIRGLAKqTNFFDKRIIDGITNGV 683
Cdd:COG1009 525 RLKPLYRLLANKWYFDELYDALFVKPVRALAR-FLWFDRYVIDGIVNGL 572
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
24-683 |
1.19e-149 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 448.07 E-value: 1.19e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 24 FLSiFFLSIVMIFSFYLSIQQIFisciHQTVWSWTINNEFSFEFGYFIDPLTSIMLILITTVGILVLIYSDNYMSHDQGY 103
Cdd:PRK06590 40 GLS-ALLSLVVFFDFLLGGGRAF----SQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGY 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 104 LRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLFWITG 183
Cdd:PRK06590 115 RRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFG 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 184 SFEFQDLFEilnNVILNNRVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 263
Cdd:PRK06590 195 SLNYDEVFA---AAPQFFGLGWSALTLICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMS 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 264 PLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY************************LITHAHSKALLFLGSG 343
Cdd:PRK06590 272 PLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAG 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 344 SIIHSMeavvgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPSFA-IIAYLTAG 422
Cdd:PRK06590 352 SVIHAM--------HHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANGHINLfVAGLVGAF 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 423 LTAFYMFRIYLLTFeghlntyfinysgkkssslysislwgkeenkklkrnfglvplltmnnrkrssffckktykisnnis 502
Cdd:PRK06590 424 LTAFYSFRLIFLVF------------------------------------------------------------------ 437
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 503 nqtfitvenFGLNTRPFYYPHESDNTILFPMLVLLLFTLFIGAIGIPFnqegidvdilsklFTPSINLLHNNSQNFVYWV 582
Cdd:PRK06590 438 ---------HGKEKEKIHHPHESPAVMTLPLIVLAVLSVFAGALIVPP-------------FLGVLPLTTELAHGEAEHH 495
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 583 EFFINATFSVSIALFGIFIAYCLYKpfyssllnltllnsfqkwsyKRIWWQKVI----NFVYNWSYNRGYIDTFFKTSLT 658
Cdd:PRK06590 496 LPVWVALLPLVVALAGIALAWLLYL--------------------KKPTLPTSIaapgRFLYTLLRNKYYFDELYEKVFV 555
|
650 660
....*....|....*....|....*
gi 525677331 659 ESIRGLAKqtnFFDKRIIDGITNGV 683
Cdd:PRK06590 556 KPGLALAR---LLWKDGDDGIIDGL 577
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
23-683 |
2.16e-130 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 398.19 E-value: 2.16e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 23 TFLSIFFLSIVMIFSFYLSIQQIFISCIHQTVWSWTINNEFSFEFGYFIDPLTSIMLILITTVGILVLIYSDNYMSHDQG 102
Cdd:TIGR01974 33 GIGSVGLSAALSAFVFVDFFLNGEGEAFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEG 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 103 YLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLFWIT 182
Cdd:TIGR01974 113 YSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYF 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 183 GSFEFQDLFEILNNVILNnrvnllFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 262
Cdd:TIGR01974 193 GTLNFQEVFALAPGAFFS------ALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVART 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 263 LPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY************************LITHAHSKALLFLGS 342
Cdd:TIGR01974 267 SPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGA 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 343 GSIIHSMEavvgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEIL-------NDSLLFspsfaI 415
Cdd:TIGR01974 347 GSVIHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILeaafasgTHSFLF-----V 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 416 IAYLTAGLTAFYMFRIYLLTFEGhlntyfinysgkkssslysislwgkeENKklkrnfglvplltmnnrkrssffckkty 495
Cdd:TIGR01974 414 AGLIGAFLTAFYSFRLIFMVFHG--------------------------KER---------------------------- 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 496 kisnnisnqtfitvenfglnTRPFYYPHESDNTILFPMLVLLLFTLFIGAIGIPFNQEgidvdILSKLFTPSINLLHNNS 575
Cdd:TIGR01974 440 --------------------HEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEF-----LKGVLPTSAEPALEHHH 494
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 576 QNFvywveFFINATFSVSIAlfGIFIAYCLYkpfyssllnltllnsfqkwsYKRIWWQKVI----NFVYNWSYNRGYIDT 651
Cdd:TIGR01974 495 VPA-----LEIWSPTAVAIL--GILLAYLLY--------------------LGNPTLPAKIaqrhSGLYRLLLNKWYFDE 547
|
650 660 670
....*....|....*....|....*....|...
gi 525677331 652 FFKTSLTESIRGLAKQTNFF-DKRIIDGITNGV 683
Cdd:TIGR01974 548 LYDKVFVKPYLFLGKLLWKDpDDKIIDGFGPGI 580
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
430-672 |
1.93e-119 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 356.54 E-value: 1.93e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 430 RIYLLTFEGHLNTYFINYSGKKSSSLYSISLWGKEENKKLKRNFGLVPLLTMNNRKRSSFFCKKTYKISNNISN--QTFI 507
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTLLLLTMNNNEKVSFFSKKTYRIDGNVRNmtRPFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 508 TVENFGlNTRPFYYPHESDNTILFPMLVLLLFTLFIGAIGIPFNQEGIDVDILSKLFTPSINLLHNNSQNFVYWVEFFIN 587
Cdd:pfam01010 81 TITHFD-NKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNSNNSVDWYEFVTN 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 588 ATFSVSIALFGIFIAYCLYKPFYSSLLNLTLLNSFQKWSYKRIWWQKVINFVYNWSYNRGYIDTFFKTSLTESIRGLAKQ 667
Cdd:pfam01010 160 AIFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLAEL 239
|
....*
gi 525677331 668 TNFFD 672
Cdd:pfam01010 240 THFFD 244
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
22-456 |
1.39e-87 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 286.52 E-value: 1.39e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 22 WTFLSIFFLSIVMIFSFYLSIqqIFISCIHQTVWSWTINNEFSFEFGYFIDPLTSIMLILITTVGILVLIYSDNYMSHDQ 101
Cdd:MTH00210 31 LTSSCIVISAIVSCCIFYETT--LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDP 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 102 GYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLFWI 181
Cdd:MTH00210 109 HIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKE 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 182 TGSFEFQDLFEILNNVILNNRvnllfLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR 261
Cdd:MTH00210 189 FGTLEFSTISSLLVTNINKES-----LTIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIR 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 262 LLPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY************************LITHAHSKALLFLG 341
Cdd:MTH00210 264 SGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLS 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 342 SGSIIHSMeavvgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILndSLLFSPSFAIIAY--- 418
Cdd:MTH00210 344 AGSVIHAV--------SDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLIL--ELTYDKYYIAFAYwlg 413
|
410 420 430
....*....|....*....|....*....|....*....
gi 525677331 419 -LTAGLTAFYMFRIYLLTFEGHLNTYFINYSGKKSSSLY 456
Cdd:MTH00210 414 sFSALLTAFYSIRLIYLTFITNTNSKKEVFIGVHESSWN 452
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
24-436 |
6.25e-87 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 284.66 E-value: 6.25e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 24 FLSIFFLSIVMIFSFYLSIQQIF-ISCIHQTVWSWTINNEFSFEFGYFIDPLTSIMLILITTVGILVLIYSDNYMSHDQG 102
Cdd:MTH00020 30 ILTSSCLIISLSWSFLIFYEILFnSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPH 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 103 YLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLFWIT 182
Cdd:MTH00020 110 IPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRF 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 183 GSFEFQDLFEILNNVILNNrvnllfLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 262
Cdd:MTH00020 190 GSLDFSSVFNMVVSAPSSD------ITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRS 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 263 LPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY************************LITHAHSKALLFLGS 342
Cdd:MTH00020 264 SPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSA 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 343 GSIIHSMeavvgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILndSLLFSPSFAIIAY---- 418
Cdd:MTH00020 344 GSVIHAL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLIL--ELAFGQYYLIFAYwlgc 413
|
410
....*....|....*...
gi 525677331 419 LTAGLTAFYMFRIYLLTF 436
Cdd:MTH00020 414 FSALLTAFYSIRLIYLTF 431
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
2-439 |
4.28e-69 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 236.77 E-value: 4.28e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 2 ILLGVGLLLFPTATKNLRRMWTFLSIFFLSIVMIFsFYLSIQQIFIScihqTVWSWTINNEFSFEFGYFIDPLTSIMLIL 81
Cdd:MTH00211 13 LILLLLPLLLPLNNSKLHIKKAVKLSFFISLIPLL-IFLDQGLETIL----TNWSWINLGLFSLNLSFKFDFYSIFFTSV 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 82 ITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQKAF 161
Cdd:MTH00211 88 ALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 162 VTNRVGDFGLLLGILGLFWITGSFEFQDLFeilnnvilnnrVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTP 241
Cdd:MTH00211 168 IYNRIGDIGLLLSMVWLLLNLNSWEISQLF-----------ILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 242 ISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY****************** 321
Cdd:MTH00211 237 VSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQP 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 322 ******LITHAHSKALLFLGSGSIIHSMeavvgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDE 401
Cdd:MTH00211 317 QLAFLHICTHAFFKAMLFMCSGSIIHGL--------NNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDL 388
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 525677331 402 IL-NDSLLFSPSFAIIAYLTA-GLTAFYMFRIYLLTFEGH 439
Cdd:MTH00211 389 ILeSMNGSYLNAWALLLTLLAtSLTAAYSFRLIFLSLGGY 428
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
50-403 |
1.82e-66 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 231.39 E-value: 1.82e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 50 IHQTVWSWTINNEFSFEFGYFIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLLQI 129
Cdd:MTH00032 57 VHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQL 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 130 YFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLFWITGSFEFQDL------FEILNNVILNNRV 203
Cdd:MTH00032 137 FIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgSGIMDRGYYGGGA 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 204 NLLFL---TLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIG 280
Cdd:MTH00032 217 YESPLapfAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFG 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 281 LITVLLGATLALAQKDIKRGLAY******-******************LITHAHSKALLFLGSGSIIHSMEAvvgyspdK 359
Cdd:MTH00032 297 ALTAFFAATVGLVQNDLKKVIAYSTCSQLgYMVLIIGIEGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV-------D 369
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 525677331 360 SQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEIL 403
Cdd:MTH00032 370 EQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
39-438 |
1.23e-64 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 225.17 E-value: 1.23e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 39 YLSIQQIFISCIH--------------QTVWSWTINNEFSFEFGYFIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYL 104
Cdd:PRK07390 41 YLNLLMTLLAFVHsllalraiwnqppqQLSFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLA 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 105 RFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLFWITGS 184
Cdd:PRK07390 121 RFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGT 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 185 FEFQDLFEILNNVilnnRVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLP 264
Cdd:PRK07390 201 LNFSDLAAWAATA----NLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQP 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 265 LFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY************************LITHAHSKALLFLGSGS 344
Cdd:PRK07390 276 VLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGS 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 345 IIHSmeavvgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPSFAIIAYLTAGLT 424
Cdd:PRK07390 356 IILT---------TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALT 426
|
410
....*....|....
gi 525677331 425 AFYMFRIYLLTFEG 438
Cdd:PRK07390 427 AFNLTRVFRLVFLG 440
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
123-422 |
2.36e-63 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 212.17 E-value: 2.36e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 123 SSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLFWITGSFEFQDLFEILNNVILNNR 202
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 203 VNLLFLtlcafLLFVGPIAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF-IVIPSIMYIISLIG 280
Cdd:pfam00361 81 LLLLFL-----LILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 281 LITVLLGATLALAQKDIKRGLAY****---********************LITHAHSKALLFLGSGSIIHSMEavvgysp 357
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSIShmgYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV------- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 525677331 358 dKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPSFAIIAYLTAG 422
Cdd:pfam00361 228 -HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
24-436 |
1.70e-58 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 208.29 E-value: 1.70e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 24 FLSIFFLSIVMIFSFYLSIQQIFISC--IHQTVWSWTINNEFSFEFGYFIDpltsIMLILITTVGILV----LIYSDNYM 97
Cdd:MTH00208 56 NFSISLLKTLAFLSLINLLIWILLGCpnINISLSNWLSNTLFNFSLSFIFD----FYFILFFSVALFVtwsiIEFSHYYM 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 98 SHDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILG 177
Cdd:MTH00208 132 SNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSL 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 178 LFWITGSFEfqdlfeiLNNVILNNRVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF 257
Cdd:MTH00208 212 SLINFNSWN-------LNEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVF 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 258 LVARLLPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY************************LITHAHSKAL 337
Cdd:MTH00208 285 LLIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAM 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 338 LFLGSGSIIHSMeavvgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEIL-----NDSLLFSPS 412
Cdd:MTH00208 365 LFLCSGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILeaglaSISNLLSII 436
|
410 420
....*....|....*....|....
gi 525677331 413 FAIIAYLtagLTAFYMFRIYLLTF 436
Cdd:MTH00208 437 LALIATL---LTAVYSFRIIFFCF 457
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
67-434 |
7.73e-58 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 209.00 E-value: 7.73e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 67 FGYFIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGF 146
Cdd:PRK12647 58 LSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 147 WFTRPIAANACQKAFVTNRVGDFGLLLGILGLFWITGSFEFQDLFEiLNNVILNNRVNLLFLtlcaFLLFVGPIAKSAQF 226
Cdd:PRK12647 138 NHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREHPLYLAIL----LLVLGGAFTKSAQF 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 227 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY*** 306
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTV 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 307 *---********************LITHAHSKALLFLGSGSIIHSmeavVGyspdkSQNMILMGGLTKHVPITKTAFLVG 383
Cdd:PRK12647 293 SalgTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHE----TG-----TRDITKLGGLRRAMPITAAAALLA 363
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 525677331 384 TLSLCGIPPLACFWSKDEILnDSLLFSPSFAIIAYLTAGLTAFYMFRIYLL 434
Cdd:PRK12647 364 ALSMAGLPPLFGFLAKELIY-EALLEAPLWSLILTVAAVLGNALMVAVAFL 413
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
21-431 |
9.53e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 202.83 E-value: 9.53e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 21 MWTFLSIFFLSIVMI---------------------FSFYLSIQQIFIScIHQ------TVWSW-TINN---EFSFEFGY 69
Cdd:MTH00066 4 MLIFNSSMILSLLLLilplllpksnnfhtnvktsvkTAFFISLIPLMIF-INQglesitTSFHWmNIFNfniNSSFKFDQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 70 FidpltSIMLI---LITTVGILVliYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGF 146
Cdd:MTH00066 83 Y-----SIIFLpiaLFVTWSILE--FAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGW 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 147 WFTRPIAANACQKAFVTNRVGDFGLLLGILGLFWITGSFEFQDLFeILNNvilNNRVNLLFLTLCAfllfvgpIAKSAQF 226
Cdd:MTH00066 156 WHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIF-LLND---NSTLPLLGLILAA-------AGKSAQF 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 227 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY*** 306
Cdd:MTH00066 225 GLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTS 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 307 *********************LITHAHSKALLFLGSGSIIHSMeavvgyspDKSQNMILMGGLTKHVPITKTAFLVGTLS 386
Cdd:MTH00066 305 SQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQKALPITTSCLTIGSLA 376
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 525677331 387 LCGIPPLACFWSKDEI---LNDSLLfsPSFAIIAYLTA-GLTAFYMFRI 431
Cdd:MTH00066 377 LTGTPFLAGFFSKDAIieaMNTSNL--NSWALILTLIAtSFTAVYSFRI 423
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
10-439 |
8.76e-56 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 200.46 E-value: 8.76e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 10 LFPTATKNlrrmwTFLSIFFLSIVMIFSFYLSIQQIFISCihqtvWSW----TINNEFSFEFGYFidpltSIMLI---LI 82
Cdd:MTH00108 31 NYPLYVKT-----TISYAFIISLIPTMMFIHSGQEMIISN-----WHWmtiqTLKLSLSFKLDYF-----SMIFIpvaLF 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 83 TTVGILVliYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQKAFV 162
Cdd:MTH00108 96 VTWSIME--FSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIL 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 163 TNRVGDFGLLLGILGLFWITGSFEFQDLFEILNNvilNNRVNLLFLTLCAfllfvgpIAKSAQFPLHVWLPDAMEGPTPI 242
Cdd:MTH00108 174 YNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPN---NSNLPLMGLLLAA-------TGKSAQFGLHPWLPSAMEGPTPV 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 243 SALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY******************* 322
Cdd:MTH00108 244 SALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPH 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 323 *****LITHAHSKALLFLGSGSIIHSMeavvgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKD-- 400
Cdd:MTH00108 324 LAFLHICTHAFFKAMLFMCSGSIIHNL--------NDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDli 395
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 525677331 401 -EILNDSllFSPSFAIIAYLTA-GLTAFYMFRIYLLTFEGH 439
Cdd:MTH00108 396 iEAANTS--YTNAWALLITLIAtSLTAAYSTRIIFFALLGQ 434
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
3-432 |
3.23e-55 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 194.60 E-value: 3.23e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 3 LLGVGLLLFPTATKNLRRMWTFLSIFFLSIVMIFSFYLSIQQIFISCihqTVWSWtinnEFSFEFGYFIDPLTSIMLILI 82
Cdd:COG0651 13 LLAAALLLLLGRRRRLQRALSLLASLALLALALALLLQVLAGGPLVY---ALGGW----PAPFGIVLVADRLSALFLLLT 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 83 TTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPiAANACQKAFV 162
Cdd:COG0651 86 ALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE-ALRAGLKYLI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 163 TNRVGDFGLLLGILGLFWITGSFEFQDLFEILNNvilnnrVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAM-EGPTP 241
Cdd:COG0651 165 LNLVGSALFLLGVGLLYGATGTLNMADLAARLAE------LDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYpAAPSP 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 242 ISALIHAAtMVAAGIFLVARLLPLFI---VIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY****---******** 315
Cdd:COG0651 239 VSALLSGL-LTKVGVYAILRVLTLLFgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSqigYILLGLGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 316 ************LITHAHSKALLFLGSGSIIHSMeavvgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLAC 395
Cdd:COG0651 318 GTPLGLAGALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
410 420 430
....*....|....*....|....*....|....*....
gi 525677331 396 FWSKDEILnDSLLFSPS--FAIIAYLTAGLTAFYMFRIY 432
Cdd:COG0651 389 FVSKWLLL-QAALEAGAwlLAAVLLLSSLLTLAYFVRIF 426
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
1-438 |
1.80e-54 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 200.07 E-value: 1.80e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 1 PILLGVGLLLFPTATKNLRRMWTFLSIfflsIVMIFSFYLSIQQIFIS--CIHQTVwSWTinNEFSFEFGYFIDPLTSIM 78
Cdd:TIGR00940 8 PPFAASLIPILYPSDQRIHIGWFVLAI----PLVCFLYTLGLYPYTASggVLHYTI-DWV--PELGLNFTLYMDGLALLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 79 LILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQ 158
Cdd:TIGR00940 81 SLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 159 KAFVTNRVGDFGLLLGILGLFWITGSFEFQDLFEILNNVilnnRVNLLFLTLcAFLLFVGPIAKSAQFPLHVWLPDAMEG 238
Cdd:TIGR00940 161 KSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAI----RNSPLFGTA-MVLVLLGAFTKSAQFPFHIWLPDAMEA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 239 PTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY--------------- 303
Cdd:TIGR00940 236 PTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFstisqlglimvllgl 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 304 -************************LITHAHSKALLFLGSGSIIHSmeavvgyspDKSQNMILMGGLTKHVPITKTAFLV 382
Cdd:TIGR00940 316 gSPSYHYQGDDSKIYALAAVAAVFHLINHATFKGSLFMAAGIIDHE---------TGTRDIRKLGGLFHIMPITFTLAMI 386
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 525677331 383 GTLSLCGIPPLACFWSKDEILN-----------DSLLFSPSFAIIAYLTAGLTAFYMFRIYLLTFEG 438
Cdd:TIGR00940 387 ASAAMAGVPPFNGFLSKEMFFAeaitahlvnpfDTVTLGYLFPYVATVASVFTFVYSLRFIHGVFFG 453
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
9-439 |
2.38e-54 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 196.54 E-value: 2.38e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 9 LLFPTATKNLrrMWTFLSI-------FFLSIV-MIFSFYLSIQQIFIScihqtvWSWTINNEFSFEFGYFIDPLtSIMLI 80
Cdd:MTH00004 20 ILLPLLSKNL--KNSPTTIkttvklaFLISLIpLTLFLNSGTESITTN------WPWIFTTTFNIPISFKLDQY-SLMFL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 81 ---LITTVGILVliYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANAC 157
Cdd:MTH00004 91 piaLFVTWSILE--FSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAA 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 158 QKAFVTNRVGDFGLLLGILGLFWITGSFEFQDLFEILNNVILNnrvnLLFLTLCAfllfvgpIAKSAQFPLHVWLPDAME 237
Cdd:MTH00004 169 LQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFSPTQTPTLP----LLGLILAA-------TGKSAQFGLHPWLPAAME 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 238 GPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKR------------------ 299
Cdd:MTH00004 238 GPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKiiafstssqlglmmvtig 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 300 ----GLAY************************LITHAHSKALLFLGSGSIIHSMeavvgyspDKSQNMILMGGLTKHVPI 375
Cdd:MTH00004 318 lnqpQLAF----------------------LHISTHAFFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLQKTLPI 367
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 525677331 376 TKTAFLVGTLSLCGIPPLACFWSKD---EILNDSLLfsPSFAIIAYLTA-GLTAFYMFRIYLLTFEGH 439
Cdd:MTH00004 368 TSSCLTIGNLALMGTPFLSGFYSKDtiiETLNTSYL--NAWALLLTLLAtSFTAAYSLRMILLVQTGF 433
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
1-403 |
2.31e-52 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 188.26 E-value: 2.31e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 1 PILLGVGLLLFPTATKNLRRMWTFLSIFFLSIVMIFSFYLSiqqifiSCIHQTVWSWTINNEFSFefGYFIDPLTSIMLI 80
Cdd:PRK06525 11 PFIGALVVFFLPGRRAAELGVLFAALTTLCMLSLAYAFYQA------GKVAVTLTLVNLGDVALF--GLVIDPVSVLIGF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 81 LITTVGILVLIYSDNYMS-------HDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTrPIA 153
Cdd:PRK06525 83 VVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQS-PKA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 154 ANACQKAFVTNRVGDFGLLLGILGLFWITGSFEFQDLFEILNNVILnnrvnLLFLtlcafLLFVGPIAKSAQFPLHVWLP 233
Cdd:PRK06525 162 LRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKY-----LVFL-----GILFAAWGKSAQLPFYSWLP 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 234 DAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIP-SIMYIISLIGLITVLLGATLALAQKDIKRGLAY*------** 306
Cdd:PRK06525 232 DAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPhVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYStitqlgYM 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 307 *********************LITHAHSKALLFLGSGSIIHSMeavvgyspdKSQNMILMGGLTKHVPITKTAFLVGTLS 386
Cdd:PRK06525 312 FFGLSLAILGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSC---------GTRLLPRLRGVLKKLPLVGVGFCVAALA 382
|
410
....*....|....*..
gi 525677331 387 LCGIPPLACFWSKDEIL 403
Cdd:PRK06525 383 ITGVPPFNGFFSKFPIF 399
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
28-431 |
3.57e-51 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 187.73 E-value: 3.57e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 28 FFLSIVMIFSFYLSIQQIFIscihqTVWSW----TINNEFSFEFGYFidpltSIMLI---LITTVGILVliYSDNYMSHD 100
Cdd:MTH00137 48 FFVSLLPLFLFLNQGAETII-----TNWNWmntlTFDINISFKFDHY-----SIIFTpiaLYVTWSILE--FASWYMHAD 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 101 QGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILglfW 180
Cdd:MTH00137 116 PNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMA---W 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 181 I---TGSFEFQDLFEILNNvilnnrvnlLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF 257
Cdd:MTH00137 193 MatnLNSWEIQQIFALSKD---------FDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIF 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 258 LVARLLPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY************************LITHAHSKAL 337
Cdd:MTH00137 264 LLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAM 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 338 LFLGSGSIIHSMeavvgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEI---LNDSLLfsPSFA 414
Cdd:MTH00137 344 LFLCSGSIIHSL--------NDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHL--NAWA 413
|
410
....*....|....*...
gi 525677331 415 IIAYLTA-GLTAFYMFRI 431
Cdd:MTH00137 414 LTLTLIAtSFTAVYSLRV 431
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
53-430 |
2.67e-50 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 188.98 E-value: 2.67e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 53 TVWSWTinNEFSFEFGYFIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYL-RFFAYMGFFNTSMLGLVTSSNLLQIYF 131
Cdd:PRK12644 56 EVVPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 132 FWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLFWITGSFEFQDlfeilnnvILNNRVNLLFLTLC 211
Cdd:PRK12644 134 FWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSE--------LLADPPTGPAVSVA 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 212 AFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGLITVLLGATLA 291
Cdd:PRK12644 206 VVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRA 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 292 LAQKDIKRGLAY****---********************LITHAHSKALLFLGSGSIIHSmeavVGyspdkSQNMILMGG 368
Cdd:PRK12644 286 LRQHDLKLILAYGTVSqlgFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHS----TG-----TRDIRKLSG 356
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 525677331 369 LTKHVPITKTAFLVGTLSLCGIPPLACFWSK----DEILNDSLLFSPSFAIIAYLTAG--LTAFYMFR 430
Cdd:PRK12644 357 LGRRQPVLAVVAALAAASMAGLPPLLGFVAKeaalEAVLHDGALGPAGPVVLAGIVLGsiLTVAYSLR 424
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
67-439 |
5.51e-50 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 187.05 E-value: 5.51e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 67 FGYFIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYL-RFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIG 145
Cdd:PRK12645 72 FTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLIS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 146 FWFTRPIAANACQKAFVTNRVGDFGLLLGILGLFWITGSFEFQDLFEILNNVilnnrVNLLFLTLCAFLLFVGPIAKSAQ 225
Cdd:PRK12645 152 YWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANADEI-----QNSPLFIPAMILILLGAFTKSAQ 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 226 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY-- 303
Cdd:PRK12645 227 FPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFst 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 304 --------------************************LITHAHSKALLFLGSGSIIHSmeavVGyspdkSQNMILMGGL 369
Cdd:PRK12645 307 vsqlglimsllgigAASLHYQGDDSKIYAAAITAAIFHLINHATFKGSLFMIVGIVDHE----TG-----TRDIRKLGGL 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 370 TKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSL------LFSPS-----FAIIAYLTAGLTAFYMFRIYLLTFEG 438
Cdd:PRK12645 378 MTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESMLnateanLFSLDtwgvlFPVIAWVASVFTFVYSIIFIFKTFFG 457
|
.
gi 525677331 439 H 439
Cdd:PRK12645 458 K 458
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
66-407 |
7.31e-50 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 186.57 E-value: 7.31e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 66 EFGYFIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIG 145
Cdd:PRK12649 73 EFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 146 FWFTRPIAANACQKAFVTNRVGDFGLLLGILGLFWITGSFefqDLFEILNN-VILNNRVNLLFLTLCAFLLFVGPIAKSA 224
Cdd:PRK12649 153 YWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTY---DIATILQDsELIENIKGHPLFLITLILIFIGAAAKSA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 225 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY* 304
Cdd:PRK12649 230 QGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 305 ****************-------*******LITHAHSKALLFLGSGSIIHsmEAVvgyspdkSQNMILMGGLTKHVPITK 377
Cdd:PRK12649 310 TISQLAYLMTMYGYTTyhepglgVAAATFHLLNHATFKACLFLVAGIVAH--EAA-------TRDIRKLGGLRKEMPITF 380
|
330 340 350
....*....|....*....|....*....|
gi 525677331 378 TAFLVGTLSLCGIPPLACFWSKDEILNDSL 407
Cdd:PRK12649 381 IVASIAALAMAGIPPLNGFLSKEMFYETSV 410
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
67-430 |
9.06e-50 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 187.32 E-value: 9.06e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 67 FGYFIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGF 146
Cdd:PRK12648 70 LSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGY 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 147 WFTRPIAANACQKAFVTNRVGDFGLLLGILGLFWITGSFefqDLFEILNN--VIlnnRVNLLFL-TLCAFLLfvGPIAKS 223
Cdd:PRK12648 150 WHHRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSY---DLDVVLAAgdLI---RAHPLYPpALVLILL--GAFTKS 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 224 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY 303
Cdd:PRK12648 222 AQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 304 ************************LIT--------------------HAHSKALLFLGSGSIIHsmEAvvgyspdKSQNM 363
Cdd:PRK12648 302 -----------------STISHLGLITlllglgsplaavaaifhiinHATFKASLFMAAGIIDH--ET-------GTRDM 355
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 525677331 364 ILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSK----DEILNDSLLFSPSFAI--IAYLTAGLTAFYMFR 430
Cdd:PRK12648 356 RRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKemffAETLDTHLLGSLDWLLpvAATLAGAFSVAYSLR 428
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
71-442 |
3.49e-45 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 173.02 E-value: 3.49e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 71 IDPLTSIMLILITTVGILVLIYSDNYMSHDQGYL-RFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFT 149
Cdd:PRK12646 76 LDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYN 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 150 RPIAANACQKAFVTNRVGDFGLLLGILGLFWITGSFEFQDLFEILNNVilnnRVNLLFLTLcAFLLFVGPIAKSAQFPLH 229
Cdd:PRK12646 156 NGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHI----KNHGLFIPM-IFMFLLGAFTKSAQFPFH 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 230 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY*----- 304
Cdd:PRK12646 231 IWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYStisql 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 305 ------------***********************LITHAHSKALLFLGSGSIIHSMeavvgyspdKSQNMILMGGLTKH 372
Cdd:PRK12646 311 gmimamvgigggYAQHQQDAIASIYVFVLFAALFHLMNHAIFKCALFMGVGIIDHEA---------GTRDIRILSGMRQL 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 373 VPITKTAFLVGTLSLCGIPPLACFWSKD----------EILNDSLLFSPSFAIIAYLTAGLTAFYMFRIYLLTFEGHLNT 442
Cdd:PRK12646 382 FPKMNLVMTIAALSMAGVPFLNGFLSKEmfldaltqtgQLSQFSLISMIIIVFIGVIASIFTFTYALYMVKEVFWGKYDS 461
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
27-453 |
1.01e-41 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 159.81 E-value: 1.01e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 27 IFFLSIVMIFSFYLSIQQIFISCIHQTVWSWTINNEFSFEFGYFIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRF 106
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 107 FAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPiAANACQKAFVTNRVGDFGLLLGILglfWITG--- 183
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSK-SLSAGMLTALTNRVGDALLILSIA---WMLMhgn 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 184 -SFEFQDLFEILNNVILnnrvnllfltlcaFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 262
Cdd:MTH00209 162 wNIFYLNFNSNLGSVIS-------------VLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 263 LPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY************************LITHAHSKALLFLGS 342
Cdd:MTH00209 229 FPSLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICA 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 343 GSIIHSMEavvgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPSFA--IIAYLT 420
Cdd:MTH00209 309 GNIIHSHG--------HSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMtlILMFLS 380
|
410 420 430
....*....|....*....|....*....|...
gi 525677331 421 AGLTAFYMFRIYLLTFEGHLNTYFINYSGKKSS 453
Cdd:MTH00209 381 TSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNK 413
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
24-456 |
1.14e-40 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 156.84 E-value: 1.14e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 24 FLSIFFLSIVMIFSFYLSIQQIFISCIHQTVWSWTINNEFSFEFGYFIDPLTSIMLILITTVGILVLIYSDNYMSHDQGY 103
Cdd:MTH00165 5 LISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 104 LRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLFwITG 183
Cdd:MTH00165 85 NRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMM-NFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 184 SFEFQDLFEILNNVILNNrvnllfltLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 263
Cdd:MTH00165 163 SWNFIFYLDFMKNSFEML--------LIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 264 PLFIvIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY************************LITHAHSKALLFLGSG 343
Cdd:MTH00165 235 NLLF-SSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 344 SIIHSMeavvgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPSF--AIIAYLTA 421
Cdd:MTH00165 314 SIIHNM--------SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFfiFFLFFFST 385
|
410 420 430
....*....|....*....|....*....|....*
gi 525677331 422 GLTAFYMFRIYLLTFEGHLNTYFINYSGKKSSSLY 456
Cdd:MTH00165 386 GLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFML 420
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
1-429 |
3.90e-37 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 149.04 E-value: 3.90e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 1 PILLGVGLLLFPTATKNLRRM--WTFLSIFFLSIVMIFsfylsiqQIFISCIHQTVWSWTI-------NNEFSFEFGYFI 71
Cdd:PRK12650 5 LALAALAVVLAPPLVRVLDRKagWPLAAIFVAAAGLLL-------KELPPILDGDALTWSVtwipdllGNGVDVNLALRA 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 72 DPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFwfTRP 151
Cdd:PRK12650 78 DALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR--SGS 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 152 IAANACQKAFVTNRVGDFGLLLGILGLFWITGSfefQDLFEILNNVILNNrvNLLFLTLCAFLLFVGPIAKSAQFPLHVW 231
Cdd:PRK12650 156 GGEAGSIRTLILTFFGGLTLLAAVAIAATQTGT---TSLSGILHSDVWAE--KPGLTTVVAVLIAVAAFTKSAQFPFHFW 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 232 LPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY******** 311
Cdd:PRK12650 231 LPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGW 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 312 ****************LI-THAHS--KALLFLGSGSIIHsmEAvvgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLC 388
Cdd:PRK12650 311 IVATIGVGTPFALTAAVVhTLAHAlfKSSLFMLIGVVDH--QA-------GTRDIRRLGSLWRRMPFTFVSVTIAALSMA 381
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 525677331 389 GIPPLACFWSKDEILnDSLLFSP--SFAIIAYL-TAGLTAFYMF 429
Cdd:PRK12650 382 AVPPLFGFVSKEGML-TAFLEAPggNAGVVLLLvGAALGAVFTF 424
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-441 |
1.14e-35 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 140.99 E-value: 1.14e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 1 PILLGVGLLLFPTATKNLRRMWTFLS---IFFLSIVMIFSFYLSIQQIfiscihQTVWSWTINNEFSFEFGYFIDPLTSI 77
Cdd:COG1008 13 PLLGALLLLLLPRRNARLARWVALAVsllTLLLSLYLLAGFDPGTGGF------QFVESYPWIPSLGISYHLGVDGISLP 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 78 MLILITTVGILVLIYSDNYMSHDQGylRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFW--FTRPIAAN 155
Cdd:COG1008 87 LVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIYAAI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 156 acqKAFVTNRVGDFGLLLGILGLFWITGSFEFqDLFEILNNVILNNRVNLLFLtlcafLLFVGPIAKSAQFPLHVWLPDA 235
Cdd:COG1008 165 ---KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAQLLLFL-----AFFIAFAVKVPMFPFHTWLPDA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 236 -MEGPTPISAlIHAATMVAAGIFLVARL-LPLFiviP----SIMYIISLIGLITVLLGATLALAQKDIKRGLAY****** 309
Cdd:COG1008 236 hVEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF---PeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIAY------ 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 310 ******************LITH------------------------AH--SKALLFLGSGSIIHSMeavvgyspdKSQNM 363
Cdd:COG1008 306 -----------------SSVSHmgfvllgifalnplglqgavlqmvSHglITAALFLLVGVLYDRT---------HTRDI 359
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 525677331 364 ILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPSFAIIAYLTAGLTAFYMFRIYLLTFEGHLN 441
Cdd:COG1008 360 ADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLK 437
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
71-438 |
6.22e-35 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 139.46 E-value: 6.22e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 71 IDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTR 150
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 151 PIAANACQKAFVTNRVGDFGLLLGILGLFWITGSfefqdlfeiLNNVILNNRV--NLLFLTLCAFLLFVGPIA-KSAQFP 227
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGT---------LNMAYLAVKMseNPTVVAKIALALFIAGLAmKSGAVP 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 228 LHVWLPDAM-EGPTPISALIHAATmvAAGIFLVAR-LLPLF---IVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLA 302
Cdd:PRK08376 239 VHMWLPDAYpAAPSSISAMLLVIK--QAGLYALARvLFSIYgpaINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLA 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 303 Y*---------------***********************LITHAHSKALLFLGSGSIIHsmeaVVGyspdkSQNMILMG 367
Cdd:PRK08376 317 YHsvsqigymllglgvgLAALGDPAMASYGEIALAGGIYHIVNHALYKALLFLTAGAVIY----ETG-----TRNLNELG 387
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 525677331 368 GLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPSFAIIAYLTAGLTAFYMFRIYLLTFEG 438
Cdd:PRK08376 388 GLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-438 |
6.39e-35 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 139.34 E-value: 6.39e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 1 PILLGVGLLLFPTATKNLRRMWTFLSIFFL--SIVMIFSFYLSIQQIFIScihqtvwswtiNNEFSFEFG---------Y 69
Cdd:PRK12667 10 PILLVLFAFLLPLLSILLKGNRKIQKIYALlvSLITLILSILLFIQVYSS-----------NKPIVYLFGgwpapigivY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 70 FIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFT 149
Cdd:PRK12667 79 EVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 150 RPIAANACQKAFVTNRVGDFGLLLGILGLFWITGSFEFQDL--------FEILNNVILNNRVNLLFLTLCAFLLFVGpia 221
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLsakirglsFPLTGGLAGNPPLALGVALALALWAFTI--- 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 222 KSAQFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFIVIPS--------IMYIISLIGLITVLLGATLAL 292
Cdd:PRK12667 236 KAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFGISPslidfraaLSPILIILGAVSAIIGALMMV 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 293 AQKDIKRGLAY****---********************LITHAHSKALLFLGSGSIIHSMeavvgyspdKSQNMILMGGL 369
Cdd:PRK12667 315 VQKDVKRLLAYSTIShmgYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAGL 385
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 525677331 370 TKHVPITKTAFLVGTLSLCGIPPLACFWSKdEILNDSLLFS--PSFAIIAYLTAGLTAFYMFRIYLLTFEG 438
Cdd:PRK12667 386 GRKMPIASFAFLIGALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
23-433 |
1.42e-34 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 139.13 E-value: 1.42e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 23 TFLSIFFLSIVMIFSFYLSI--QQIFIScihqtvwsWTINNEFS--FEFGYFIDPLTSIMLILITTVGILVLIYSDNYMS 98
Cdd:MTH00207 11 SYLLWFMSILMFPLSLYLMMcnKTILIE--------WEIFTISSspINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 99 HDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVGDFGLLLGILGL 178
Cdd:MTH00207 83 EDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSIGWT 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 179 F----WITGSFEFQDLfeilNNVIlnnrvnllflTLCaflLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAA 254
Cdd:MTH00207 162 LnqghWSITNMWQTDM----NNYI----------ALS---IMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTA 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 255 GIFLVARLLPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY************************LITHAHS 334
Cdd:MTH00207 225 GVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALF 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 335 KALLFLGSGSIIHSMEavvgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPSFA 414
Cdd:MTH00207 305 KALLFVCAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSL 376
|
410 420
....*....|....*....|.
gi 525677331 415 IIA--YLTAGLTAFYMFRIYL 433
Cdd:MTH00207 377 MILmiFLATALTAAYSTRFTL 397
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
34-456 |
1.56e-34 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 138.82 E-value: 1.56e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 34 MIFSFYLSIQQIFISCIHQTVW-SWTINN----EFSFEFgyFIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFA 108
Cdd:MTH00151 12 FSYSVFLFPLLGYFGLNGISLIfEWELLSvsscSFSFEL--VLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMW 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 109 YMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQKAFvTNRVGD-FGLLLGILGLFWITGSFEF 187
Cdd:MTH00151 90 LVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDvLILLSIALLVLLGHWSILS 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 188 QDLFEilnnvilnnrvnllFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFI 267
Cdd:MTH00151 169 MWDFK--------------LSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLS 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 268 VIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY************************LITHAHSKALLFLGSGSIIH 347
Cdd:MTH00151 235 SSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIH 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 348 SMeavvgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILnDSLLFSPS---FAIIAYLTAGLT 424
Cdd:MTH00151 315 SS--------SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLIL-ESSLMSPTsllMVLLMFVGVGLT 385
|
410 420 430
....*....|....*....|....*....|..
gi 525677331 425 AFYMFRIYLLTFEGHLNTYFinYSGKKSSSLY 456
Cdd:MTH00151 386 ALYSARLSFCLVWGSMKSSS--LSSKSDEDFY 415
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-431 |
7.34e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 132.70 E-value: 7.34e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 3 LLGVGLLLFPTATKNLRRMWTFLsifflsiVMIFSFYLSIQqIFISCIHQTVWSWTINN---EFSFEFGyfIDPLTSIML 79
Cdd:PRK08375 14 LLAAALIVLLPKRRRLRWALALL-------VAALTFALAIS-LLPQVLDGGVIAYVVGGwppGIGIELR--ADSLSALFL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 80 ILITTVGILVLIYSDNYMSHDQGylRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPiAANACQK 159
Cdd:PRK08375 84 LVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR-ALAAARK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 160 AFVTNRVGDFGLLLGILGLFWITGSFEFQDLFEILNnvilnnRVNLLFLTLcaFLLFVGPIAKSAQFPLHVWLPDAMEGP 239
Cdd:PRK08375 161 YLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAF--GFVLLALALKAAVFPLHTWLPRAYPAA 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 240 TPISALIHAATMVAAGIFLVARLL-----PLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY**---****** 311
Cdd:PRK08375 233 PPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTvsqMGYILL 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 312 ****************LITHAHSKALLFLGSGSIihsmEAVVGyspdkSQNMILMGGLTKHVPITKTAFLVGTLSLCGIP 391
Cdd:PRK08375 313 GLALLTPLALAAGLLHLLHHALMKGALFLAAGAI----EVTYG-----TRRLSELSGLGRRMPLTAAAFAVASLSLIGVP 383
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 525677331 392 PLACFWSKDEILNDSL-LFSPSFAIIAYLTAGLTAFYMFRI 431
Cdd:PRK08375 384 PTSGFVSKWYLVVGAVeAGQWLVLAVLLASSLLALLYFLRI 424
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
71-438 |
5.93e-31 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 128.85 E-value: 5.93e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 71 IDPLTSIMLILITTVGILVLIYSDNYMSHDQGylRFFAYMGFFN----TSMLGLVTSSNLLQIYFFWELVGMCSYLLIGF 146
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFREYEG--KGPGAMGFFYnlflASMVLVLLADDAFSFLVAWETMSLSSWFLVIA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 147 WFTRPIAANACQKAFVTNRVGDFGLLLGILGLFWITGSFEFQDLfeilnnvilnnRVNLL--FLTLCAFLL-FVGPIAKS 223
Cdd:PRK06521 156 NHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAM-----------RAAHLspFWASLVFLLaLFGFGAKA 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 224 AQFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFIVIPSIM--YIISLIGLITVLLGATLALAQKDIKRG 300
Cdd:PRK06521 225 GLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWWwgVLVLALGAISAVLGVLYALAEHDLKRL 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 301 LAY--------------************************LITHAHSKALLFLGSGSIIHSMEavvgyspdkSQNMILM 366
Cdd:PRK06521 304 LAYstienigiifvglgLAMVFIAYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATG---------TRDMEKL 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 367 GGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNdSLLFSPSF-------------AIIAyLTAGLTAFYMFRIYL 433
Cdd:PRK06521 375 GGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQ-SLLSSPGLpqwglklavpiaaAMLA-LTAALAAMCFVKFYG 452
|
....*
gi 525677331 434 LTFEG 438
Cdd:PRK06521 453 ITFLG 457
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
2-431 |
3.64e-25 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 109.44 E-value: 3.64e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 2 ILLGVGLLLF---PTATKNLRRMWTFLSIFFLSIVMIFSFylsiqqifiscihqtvWSWTINNEFSFEFGYFIDPLTSIM 78
Cdd:COG1007 12 ILLLGALVLLlldLFLPRRSRRLLAGLALLGLLLALALLL----------------LALGGGTGTAFGGMFVVDGFALFF 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 79 LILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTS-MLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANAC 157
Cdd:COG1007 76 KLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAA 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 158 QKAFVTnrvGDFGLLLGIlglFWI------TGSFEFQDLFEILNNVILNNrvnlLFLTLCAFLLFVGPIAKSAQFPLHVW 231
Cdd:COG1007 156 LKYFLL---GALSSGFLL---YGIsllygaTGSLNLAGIAAALAAGGANS----PLLLLGLVLVLAGLAFKLSAVPFHMW 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 232 LPDAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY***** 308
Cdd:COG1007 226 TPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSS--- 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 309 *******************lITHA-------------HSKALLF---------LGSGSIIhsmeAVVGYSPDKSQNMILM 366
Cdd:COG1007 302 --------------------IAHAgylllglaagtplGVSAALFyllaylfmnLGAFAVI----LLLSRKGGEAEEIEDL 357
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 525677331 367 GGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILndSLLFSPSF---AIIAYLTAGLTAFYMFRI 431
Cdd:COG1007 358 AGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVF--SAAVEAGLywlAVIAVLNSVISAYYYLRV 423
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
72-303 |
1.10e-24 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 108.25 E-value: 1.10e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 72 DPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRP 151
Cdd:PRK08168 68 SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 152 IAANACQKAFVTNRVGDFGLLLGILGLFWITGSFEFQDLFEILNNVILnnrvnLLFLTLCAFLLFVGPIAKSAQFPLHVW 231
Cdd:PRK08168 148 FARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHLAAQGA-----SPSLQAAALLLVLAVILKTAQLPVHGW 222
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 525677331 232 LPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY 303
Cdd:PRK08168 223 LIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAW 293
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
2-399 |
1.35e-24 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 109.05 E-value: 1.35e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 2 ILLGVGLLLFPTATK---NLRRMWTFLSIFFLSIVMIFSFYLSIQQIFIScIHQTVWSWTINNEFSFEFgyFIDPLTSIM 78
Cdd:PRK08667 6 FLGAILLLLAAAVIPlvfRHKRKRVWQSVLWLVIAIALLLFAGSLQLFTG-NPLDIPLWGIAPGLDITF--HIDRLAAFF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 79 LILITTVGILVLIYSDNYMSHDQGYLR---FFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAAN 155
Cdd:PRK08667 83 IILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQR 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 156 ACQKAFVTNRVGDFGLLLGILGLFWITGSFEFQDLfeilnnvilnnRVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDA 235
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPL-----------GASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYA 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 236 MEG-PTPISALIhAATMVAAGIFLVARLLpLFIVIPSIMY--IISLIGLITVLLGATLALAQKDIKRGLAY--------- 303
Cdd:PRK08667 232 HPAsPSNVSALM-SGVMLKVAVYGLVRFL-MDVLSPELWWgvLILLAGSISALLGVIYALKEHDLKGLLAYssienigii 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 304 -----************************LITHAHSKALLFLGSGSIIHSMeavvgyspdKSQNMILMGGLTKHVPITKT 378
Cdd:PRK08667 310 lmgigLYVIFGVYGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHAT---------GTRNIEKMGGLVKLMPYTSA 380
|
410 420
....*....|....*....|.
gi 525677331 379 AFLVGTLSLCGIPPLACFWSK 399
Cdd:PRK08667 381 LFLVGAVSIAALPPFNGFASE 401
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-431 |
1.47e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 107.59 E-value: 1.47e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 2 ILLGVGLLLFPTATKNLRRMWTFLSIffLSIVMIFSFYLSIQQIFISCIHQtvwSWTINNEFSFEFGYFIDPLTSIMLIL 81
Cdd:PRK06589 17 LLVGALNLTSPFATKKDSFIRNFLLI--TISIFFFGNILLIDLLFLKGIRA---QFELMDFGNYSIGLHLEPLGLIFLLL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 82 ITTVGILVLIYSDNYMSHDQGYLRFfAYMGFFNTSML---GLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQ 158
Cdd:PRK06589 92 IGFLWICALLYTPKYLAINNIDSSS-RFLFFFNLTILigvLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYK 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 159 KAFVTNRVGDFGLLLGILGLFWITGSFEFQ--DLFEILNNVILnnrvnllfltlcaFLLFVGPIAKSAQFPLHVWLPDAM 236
Cdd:PRK06589 171 YLKILMISALLLFLPAVILIYTKTGNLDFVsgGLFSKNQSIIL-------------LLMFIYGIAKTAIFPVHSWLPAAM 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 237 EGPTPISALIHAATMVAAGIFLVARLLpLFIVIPSIMYII-------SLIGLITVLLGATLALAQKDIKRGLAY****-- 307
Cdd:PRK06589 238 VAHYPVSALLHAVIVVKTGLFCIYKIL-LYIFGLSYLQRIfaefnwlIFIPIVSIFYSSLKALKTDNIKKILAYSTISql 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 308 -********************LITHAHSKALLFLGSGSIihsmeavvgYSPDKSQNMILMGGLTKHVPITKTAFLVGTLS 386
Cdd:PRK06589 317 sLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDKLHGTSKSFPLISFIISISSLS 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 525677331 387 LCGIPPLACFWSKDEIL-----NDSLLFSPSFAIIAYLTAGLTAFYMFRI 431
Cdd:PRK06589 388 LIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKI 437
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
69-431 |
5.08e-23 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 102.98 E-value: 5.08e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 69 YFIDPLTSIMLILITTVGILVLIYSDNYMShDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWF 148
Cdd:PRK05777 69 LVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRR 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 149 TRPIAANACQKAFVTNRVGDFGLLLGILGLFWITGSFEFQDLFEILNNVILNNrvnLLFLTLCAFLLfVGPIAKSAQFPL 228
Cdd:PRK05777 148 DRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALADGSGNS---LLLLFGLVFLL-VGLAFKLSAVPF 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 229 HVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLLPLFI--VIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY** 305
Cdd:PRK05777 224 HMWTPDVYEGaPTPVTAFLATAPKIAA-FAVLLRLLVVAFggLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 306 **********************lITH---------AHS----KALLF---------LGSGSIIHSMEAVVGYSPDKSQnm 363
Cdd:PRK05777 303 -----------------------IAHagyllvglaAGTaegySAVLFyllaylfmtLGAFGVISLLRRKGGEAESISD-- 357
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 525677331 364 ilMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKdeilndSLLFSPSF-------AIIAYLTAGLTAFYMFRI 431
Cdd:PRK05777 358 --FAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGK------FYVFEAAVeaglwwlAVIGVLNSAIGAFYYLRV 424
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
3-438 |
6.87e-23 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 102.71 E-value: 6.87e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 3 LLGVGLLLFPTATKNLRRMWTFLSI----FFLSIVMIFSFylSIQQIFISCIHQTVWSWTINNEFSFEfgyfIDPLTSIM 78
Cdd:TIGR01972 9 LIGALLILLLPSNKDGKARWIALVValatLLLSLLLLFQF--DPTGSGFQFTEDIPWIPALGISYHLG----VDGISLLL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 79 LILITTVGILVLIYSDNYMSHDQGYlrFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWfTRPIAANACQ 158
Cdd:TIGR01972 83 VLLTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYAAM 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 159 KAFVTNRVGDFGLLLGILGLFWITG-SFefqDLFEILNNVILNNRVNLLFltlcaFLLFVGPIAKSAQFPLHVWLPDAM- 236
Cdd:TIGR01972 160 KFFLYTLAGSLLMLLAILGLYFLGGgTF---DLLELLNLPLPFGVQTWLF-----LAFFIAFAVKVPLFPLHTWLPDAHv 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 237 EGPTPISALIHAATMVAAGIFLVARLLPLFiviP----SIMYIISLIGLITVLLGATLALAQKDIKRGLAY****---** 309
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFNLPLF---PdaslYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSIShmgFV 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 310 ******************LITHAHSKALLFLGSGSIihsmeavvgYSPDKSQNMILMGGLTKHVPITKTAFLVGTLSLCG 389
Cdd:TIGR01972 309 LLGIFSFNELGISGAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLG 379
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 525677331 390 IPPLACFWSKDEILNDSLLFSPSFAIIAYLTAGLTAFYMFRIYLLTFEG 438
Cdd:TIGR01972 380 LPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFG 428
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
65-399 |
1.43e-22 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 102.38 E-value: 1.43e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 65 FEFGYFIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFfnTSMLGLVTSSNLLQIYFFWELVGMCSYLLI 144
Cdd:PRK08668 61 FKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVLGVFLANDLLTLYIFWEIMTFSSFMMV 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 145 gfWFTRPIAANACQKAFVTNRVGDFGLLLGILGLFWITGSFEFQDLFEILNNVILNNRVNLLFLTLCAFllfvgPIAKSA 224
Cdd:PRK08668 139 --PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLINDTSTGFALIVFLFLLAF-----GVAKAG 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 225 QFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLLP---------LFIVIPSIMYIISLIGLITVLLGATLAL 292
Cdd:PRK08668 212 IFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtklfsefgTYRGVPLFNYILAWLGNISIIVGTLMAI 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 293 AQKDIKRGLAY************************L---ITHAHSKALLFLGSGSIIHSMeavvgyspdKSQNMILMGGL 369
Cdd:PRK08668 292 LQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLfhvFNHALFKGLFFLIFAAVIYRT---------GTTKISEMGGL 362
|
330 340 350
....*....|....*....|....*....|
gi 525677331 370 TKHVPITKTAFLVGTLSLCGIPPLACFWSK 399
Cdd:PRK08668 363 IEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
24-460 |
3.32e-22 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 100.76 E-value: 3.32e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 24 FLSIFFLSIVMIFSFYLSIQQIFISCIHQTVWSWTINNefsfefgYFIDPLTSIMLILITtvgILVLIYSDNYMSHDQGY 103
Cdd:MTH00095 6 FLILFFFFFLLLFILFLPFMKLNLFFLEWDFLSLKFNF-------YFNSLLFSLILLLVT---LSVLVFSSYYMNGELNF 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 104 LRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTrpiaANACQKA---FVTNRVGDFGLLLGILGLFW 180
Cdd:MTH00095 76 NYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNN----WDSNSGAmntALTNRIGDFFIFLFFSGFIF 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 181 ITGSFeFQDLFeilnnvilnnrvnllFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVA 260
Cdd:MTH00095 152 SSYYF-FSFSF---------------FSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLM 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 261 RLLPLFIVIpSIMYIISLIGLITVLLGATLALAQKDIKRGLAY************************LITHAHSKALLFL 340
Cdd:MTH00095 216 NFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFM 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 341 GSGSIIHSMEAvvgyspdkSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILndSLLFSPS----FAII 416
Cdd:MTH00095 295 QVGYLIHSNFG--------QQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELIL--ELFFFNNymifFSLM 364
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 525677331 417 AYLTAGLTAFYMFRIYLLTFeghLNTYFINYSGKKSSSLYSISL 460
Cdd:MTH00095 365 FFFSVFLTFGYSYRLWKSFF---LSFSKVVNVYSSSVLMNFLSL 405
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-438 |
4.77e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 100.03 E-value: 4.77e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 1 PILLGVGLLLFPTATKNLRRMWTFLSIFFLSIVMIFSFYLSIQqiFIScihqtvwswtinnefSFEFGYFIDPLTSIMLI 80
Cdd:PRK07234 12 PFLLGFAIYLLPKLDRNLALGMAIVSAVYALGLVASMVPLELT--LLD---------------NFGVTLRADALSGYFIL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 81 LITTVGILVLIYSdnyMSHDQGYLrFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQKA 160
Cdd:PRK07234 75 TNALVTLAVIFYC---WESAKTRF-FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 161 FVTNrVGDFGLLLGILGLFWITGSFEFQDLFEILNNVIlnnrvnllfltlcaFLLFVGPIAKSAQFPLHVWLPDAMEGPT 240
Cdd:PRK07234 151 FYSN-VAMLFYLIGAVLVYQANGTFAFSGLATADPEAF--------------ALIALGLLVKGGIFVSGLWLPLTHSEAE 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 241 PISALIHAATMVAAGIFLVARLLplfIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY***************** 320
Cdd:PRK07234 216 PPVSALLSGVVVKAGVFPLVRCA---LDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVGG 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 321 *******lITHAHSKALLFLGSGSIihsmeavvgYSPDKSQNMILMGGLTKHVPITktaflVGTLSLCGIPPLACFWSKD 400
Cdd:PRK07234 293 LYA-----LAHGLVKSTLFLCAGAL---------PSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKV 353
|
410 420 430
....*....|....*....|....*....|....*...
gi 525677331 401 EILNDSLlfsPSFAIIAYLTAGLTAFYMFRIYLLTFEG 438
Cdd:PRK07234 354 LTLKNLL---PWQAIALNLAAVGTAASFWKFIFLPFSA 388
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
1-441 |
1.44e-21 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 98.74 E-value: 1.44e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 1 PILLGVGLLLFPTATKNLRR---MWTFLSIFFLSIVMIFSF-YLSIQQIFIsciHQTVWSWTINneFSFEFGyfIDPLTS 76
Cdd:PRK05846 13 PLIGGLLVLLTERFGARLARwiaLIGTLLTLLLSLVLWIGFdSSNAGFQFV---EKHPWIPRFG--ISYHLG--VDGISL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 77 IMLILITTVGILVLIYSDNYMSHDQGylRFFAYMGFFNTSMLGLVTSSNLLQIYFFWE--LVGMcsYLLIGFW--FTRPI 152
Cdd:PRK05846 86 LLVVLTALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEamLIPM--YFLIGVWggKNRIY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 153 AANacqKAFVTNRVGDFGLLLGILGLFWI----TGSFEFQDLfeiLNNVILNNRVNLLFLtlcAFllFVGPIAKSAQFPL 228
Cdd:PRK05846 162 AAT---KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADL---LNLPLPPGVQYWLFL---AF--FIAFAVKMPMFPL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 229 HVWLPDAMEGPTPISALIHAATMVAAGIF-LVARLLPLFIVIPSIM-YIISLIGLITVLLGATLALAQKDIKRGLAY*** 306
Cdd:PRK05846 231 HTWLPDAHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDASHEFaPIIITLGVIAIIYGALVALAQTDIKKLIAYSSI 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 307 *---********************LITHAHSKALLFLGSGSIIHSMeavvgyspdKSQNMILMGGLTKHVPITKTAFLVG 383
Cdd:PRK05846 311 ShmgFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRL---------HTRDIADYGGLAKVMPVLAAFFLFF 381
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 525677331 384 TLSLCGIPPLACFWSKDEILNDSLLFSPSFAIIAYLTAGLTAFYMFRIYLLTFEGHLN 441
Cdd:PRK05846 382 AMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVK 439
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
70-438 |
3.23e-19 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 91.37 E-value: 3.23e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 70 FIDPLTSIMLILITTVGILVLIYSDNYMSHDQgylrFFAYMGFFNTSMLG---LVTSSNLLQIYFFWELVGMCSYLLIGF 146
Cdd:PRK08377 75 YIGPFAALFVLIIAIVSFIMSIFSLKAVEVEP----IDKYAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTAY 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 147 WFTRPiAANACQKAFVTNRVGDFGLLLGILGLFWITGSFEFQDLFEILNNVilNNRVNLLFLTLcaflLFVGPIAKSAQF 226
Cdd:PRK08377 151 NKTGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGTI--DPTVAQVGLAL----LIFGLAVEAELF 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 227 PLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLPLFIVIP---SIMYIISLIGLITVLLGATLALAQKDIKRGLA 302
Cdd:PRK08377 224 PLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANgwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIA 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 303 Y****---********************LITHAHSKALLFLGSGSIIHSMeavvgyspdKSQNMILMGGLTKHVPITKTA 379
Cdd:PRK08377 303 YSSIGqvgMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALA 373
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 525677331 380 FLVGTLSLCGIPPLACFWSKDEILNDSLLFSPSFAIIAYLTAGLT-AFYMFR-IYLLTFEG 438
Cdd:PRK08377 374 LTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVeAVYYFRlIHTMWFKG 434
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
2-455 |
8.95e-19 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 89.62 E-value: 8.95e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 2 ILLGVGLLLFPTATKNLRRMWTFLSIFFLSIVMIFSFYLSIQqifiscihqtvwswtiNNEFSFEFGYFIDPLTSIMLIL 81
Cdd:TIGR01770 15 FILLLYGLFYSRKKRNPLLLKNLSYIVLLSALVSLFLTLQYA----------------AYLFTGFSFFIVDNFALLIKLI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 82 ITTVGILVLIYSDNYMSHDQ-GYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQKA 160
Cdd:TIGR01770 79 LLLSTLLTFFFALSYLSKEKiNKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKY 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 161 FVTNRVGDFGLLLGILGLFWITGSFEFQDLFEILNNVILNNrvNLLFLTLcaFLLFVGPIAKSAQFPLHVWLPDAMEG-P 239
Cdd:TIGR01770 159 FILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNI--SLLLLGI--VLILVGLLFKLSAVPFHMWVPDVYEGaP 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 240 TPISALIHAATMVAA-GIFLVARLLPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY*************** 318
Cdd:TIGR01770 235 TPVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLA 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 319 *********LItHAHSKALLFLGSGSIIHSMEAvvgYSPDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWS 398
Cdd:TIGR01770 315 GTLEGIKAVLF-YIFIYALMSLGAFGVLSLLRS---YKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFG 390
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 525677331 399 KDEI----LNDSLLFspsFAIIAYLTAGLTAFYMFRIYLLTFEGHLNTYFINYSGKKSSSL 455
Cdd:TIGR01770 391 KFYVffalLKSGLYW---LAVIAVLTSVIGAFYYLRVVKVMYFDKPERRIPSNPQSKAQSL 448
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
1-398 |
2.83e-18 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 88.45 E-value: 2.83e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 1 PILLGVGLLLFPtatknLRRMWTFLSIFFLSIVMIFSFYLSIQqifiscihqtvwswTINNEFSFEFG--YFIDPLTSIM 78
Cdd:PRK06458 14 PLLASLLLFALR-----KRRLVATLNVLGITLTLILALWLVFT--------------VPDAGEIFAAGlwFFIDDLNVFF 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 79 LILITTVGILVLIYSDNYMSHDQ-------GYLRFfaYMGFFNT---SMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWF 148
Cdd:PRK06458 75 LALIGVVGFLTSLYSIGYMRHEVehgelspVTLRL--YYGMYQLflfTMLLALTSNNLGLMWVAIEATTLSSALLVGIYR 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 149 TRPiAANACQKAFVTNRVGD----FGLLLGILGLFWITGSFEFQDLFEILNNVilNNRVNLLFLTLCAFLLFVGPIAKSA 224
Cdd:PRK06458 153 TRA-SLEAAWKYIIICSVGVafalFGTILVYANAATVMGDGEMAILWTELLKH--ASLLDPTLMKLAFVFLLIGFGTKVG 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 225 QFPLHVWLPDA-MEGPTPISALihaatmvaagifLVARLLP--LFIVI--------------PSIMYIIslIGLITVLLG 287
Cdd:PRK06458 230 LFPMHAWLPDAhSEAPSPVSAL------------LSGVLLNvaLYAVLryyilidaaigsdfPGRLLLI--FGLLSVLVA 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 288 ATLALAQKDIKRGLAY************************LI---THAHSKALLFLGSGSIIHSMeavvgyspdKSQNMI 364
Cdd:PRK06458 296 AFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLhmlNHSLTKSAIFFASGNVLQKY---------GTRDIN 366
|
410 420 430
....*....|....*....|....*....|....
gi 525677331 365 LMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWS 398
Cdd:PRK06458 367 VIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFIS 400
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-438 |
2.23e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 85.77 E-value: 2.23e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 1 PILLGVgLLLFPTATKNLRRmwtFLSIFFLSIVMIFSFYLsIQQIFISCIhQTVWSWTINNEFSFEFgyFIDPLTSIMLI 80
Cdd:PRK07691 13 PVITAI-LLIFLGKRPIIQR---YVALIGSLLTLVAAIIL-VANVYKHGI-QTLELGNWKAPFGIVF--VADMFAALLVL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 81 LITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRpIAANACQKA 160
Cdd:PRK07691 85 TSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQLRESIKY 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 161 FVTNRVGDFGLLLGILGLFWITGSFEFQDLFEILNNVILNNRVnllFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGP- 239
Cdd:PRK07691 164 VLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTG---LITVVAILFLFVFATKAGLFPLYFWLPGSYYAPp 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 240 TPISALIhAATMVAAGIFLVARLLPLFIV--IPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY****---******* 314
Cdd:PRK07691 241 IAIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIavgVILVGVA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 315 *************LITHAHSKALLFLgsgsIIHSMEAVVGYSPDKSqnmilMGGLTKHVPITKTAFLVGTLSLCGIPPLA 394
Cdd:PRK07691 320 MMTESGMIGAIYYLIHDMIVKAALFL----LIGIMIKITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSLAGIPPLS 390
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 525677331 395 CFWSKDEILNDSLLF-SPSFAIIAYLTAGLTAFYMFRIYLLTFEG 438
Cdd:PRK07691 391 GFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWG 435
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
26-436 |
5.37e-17 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 84.55 E-value: 5.37e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 26 SIFFLSIVMIFSFYLSIQQIFISCIHQTVWSwtiNNEFSFEFGYFIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLR 105
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVSLNFLS---FGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 106 FFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTrPIAANACQKAFVTNRVGDFGLLLGILGLFWITGSF 185
Cdd:MTH00063 78 LNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGS 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 186 efqdlfeilnnvilnnrvnllfLTLCAFLLFVGpIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlLPL 265
Cdd:MTH00063 157 ----------------------FLCCLFFFLIV-FTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDY 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 266 FIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY************************LITHAHSKALLFLGSGSI 345
Cdd:MTH00063 213 LLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 346 IhsmeavVGYSPDKSQNMILMGGLTKHVPITKTAFLVgtLSLCGIPPLACFWSKDEILND--SLLFSPSFAIIAYLTAGL 423
Cdd:MTH00063 293 M------SGSGGSQSSNCVYSSILYGSWNLFYLFLLV--LGLSGVPFIGVFFSKHFLLSSfsSVVFNVSLLLVVILCVFL 364
|
410
....*....|...
gi 525677331 424 TAFYMFRIYLLTF 436
Cdd:MTH00063 365 SYLYSFRLCLILF 377
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
57-107 |
6.42e-14 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 66.30 E-value: 6.42e-14
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 525677331 57 WTINNEFSFEFGYFIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFF 107
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
70-436 |
5.80e-13 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 71.52 E-value: 5.80e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 70 FIDPLTSIMLILITT-VGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWF 148
Cdd:PRK12663 73 FTGDSLSALMVTTASfVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQ 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 149 TRPiAANACQKAFVTNRVGDFGLLLGILGLFWITGSFEFQDLFEILNNVilnnRVNLLFLTLCAFLLFVGPIaKSAQFPL 228
Cdd:PRK12663 153 ERE-QLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDM----GDTATLTTIALLFLLAFGM-KAALFPF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 229 HvWLPDAMEGP-TPISALIhAATMVAAGIFLVARLLP-LFIVIPSIMY-IISLIGLITVLLGATLALAQKDIKRGLAY** 305
Cdd:PRK12663 227 M-WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHpLLATMAAITMVIGALGALAYKDIRRIAGYQV 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 306 **********************LITHAHS---KALLFLGSGSIIhsmeAVVGYSPDKSqnmilMGGLTKHVPITKTAFLV 382
Cdd:PRK12663 305 ISSIGFILLGLALGTPAGINGAIFYLVHDmvvKTALFLIAGSLV----RLTGYRSLQY-----LGGLYRKEPLFGALFLI 375
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 525677331 383 GTLSLCGIPPLACFWSKdeilndSLLFSPSFAIIAY-------LTAGLTAFYMFRIYLLTF 436
Cdd:PRK12663 376 LIFAIGGLPPFSGFWGK------VLLVQGALDNGAYillalmlITSLITMYSLFRIFFLAY 430
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
71-431 |
1.70e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 67.07 E-value: 1.70e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 71 IDPLTSIMLILITTVGILVLIYSdNYMSHDQ----GYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGF 146
Cdd:PRK12662 74 VDILSATMLVLVNFIAVMSVLYG-IYPNRKEisvnKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAM 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 147 WFTRPiAANACQKAFVTNRVGDFGLLLGILGLFWITGSFEFQDLFEILNNVILNNRVNLLFLtlcafLLFVGPIAKSAQF 226
Cdd:PRK12662 153 GRDKK-ALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVL-----FIMVGLFIKAALF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 227 PLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL------PLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKR 299
Cdd:PRK12662 227 PFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKR 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 300 GLAY****---********************LITHAHSKALLFLGSGSIIHsmeavvGYSPDKSQNMIlmgGLTKHVPIT 376
Cdd:PRK12662 306 IFAYSSIShigYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISY------HFGTTKLEDCL---NLWKSMPKI 376
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 525677331 377 KTAFLVGTLSLCGIPPLACFWSKDEILnDSLLFSPSFAIIAYLTAG--LTAFYMFRI 431
Cdd:PRK12662 377 TLAFVLLSLSLIGMPPTSGFVAKWYIL-DAFIKSNAWIGLVVLLVGsgLSVIYVWKI 432
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
6-303 |
3.29e-11 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 66.27 E-value: 3.29e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 6 VGLLLFPTATKNLRRMWTFLS--IFFLSIVMIFSFYLSIQQIFISCIHQtvWSWTINneFSFEFGyfIDPLtSIMLILIT 83
Cdd:PRK07363 16 IGFFPGNLPSARLRQITLVFAvlVLAWSLFLLTQFDLSDPGMQFQEYLP--WNEPLG--LSYSLG--VDGL-SLPLLVLN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 84 TVGILVLIYSDNYMSHDQGYlrFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPiAANACQKAFVT 163
Cdd:PRK07363 89 SLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-RGYASIKFLIY 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 164 NRVGDFGLLLGILGLFWITGSFEFQdlFEILNNVILNNRVNLLFLTLcaflLFVGPIAKSAQFPLHVWLPDAMEGPTPIS 243
Cdd:PRK07363 166 TAVSGLLVLAAFLGIVWLSGSTSFD--YDAISTQNLSLNTQLILLTG----LLLGFGIKIPLVPLHTWLPDAYTEASPAV 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 525677331 244 ALIHAATMVAAGIFLVARL-LPLFiviPSIMYIIS----LIGLITVLLGATLALAQKDIKRGLAY 303
Cdd:PRK07363 240 AILLGGVLAKLGTYGLLRFgLQLF---PQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMVAY 301
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
71-369 |
5.70e-11 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 65.44 E-value: 5.70e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 71 IDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYMGF--FNTSMLGLvtSSNLLQIYFFWELVGMCSYLLIGFWF 148
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGATLLGLTLLIGLNK 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 149 TRPIAANACQKAFVTNRVGDFGLLLGILGLFWITGSFEfqdlfeiLNNVILNNRVNLLFL---TLCAFLLFVGPIAKSAQ 225
Cdd:PRK08601 148 GWKVAREAAKISGMLFLISWLALALAIVWLFIATGEWQ-------LTSVLSNENLAQLGTwekTGINLLLILAVMIPAAQ 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 226 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLFI-VIPSImyIISLIGLITVLLGATLALAQKDIKRGLAY* 304
Cdd:PRK08601 221 WPFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHdDIAQI--LLLIFASISVLIGTGISLVQVDYKRQLVGS 297
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 525677331 305 ***********************LITHAHSKALLFLGSGSIIHSMEAVVGYSPDKSQNMILMGGL 369
Cdd:PRK08601 298 TMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFNIVKQANEKKSYLWIVVGRV 362
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
27-446 |
1.88e-10 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 63.57 E-value: 1.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 27 IFFLSIVMIFSFYLS-IQQIFISCIhqtvwSWTINNEFSFEFGyfIDPLtSIMLILITTVGILVLIYSDNYMSHDQGYlr 105
Cdd:PRK06473 39 LLLLSLVLAFQFDPGnPNQQFTEFI-----PWIDSLGLSYHLG--VDGL-SLPLLVLNSLLTLIAIYSSDESIQRPRF-- 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 106 FFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFW--FTRPIAAnacQKAFVTNRVGDFGLLLGILGLFWITG 183
Cdd:PRK06473 109 YYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWggQRRGYAA---TKFLLYTAISGILILVSFLGLVWLSG 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 184 SFEFQdlFEILNNVILNNRVNLLFLTLcaflLFVGPIAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVAR- 261
Cdd:PRK06473 186 ASSFD--YEPLRSHTLPLSTQLLLLAP----ILVGFGIKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRf 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 262 ---LLPLFIVIpsIMYIISLIGLITVLLGATLALAQKDIKRGLAY****---********************LITHAHSK 335
Cdd:PRK06473 259 gvgLFPEAWVY--LAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGhmgYILLAAAAATPLSILAAVFQMISHGLIS 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 336 ALLFLGSGsiihsmeavVGYSPDKSQNMILMGGL---TKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPS 412
Cdd:PRK06473 337 ALLFLLVG---------VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPV 407
|
410 420 430
....*....|....*....|....*....|....
gi 525677331 413 FAIIAYLTAGLTAFYMFRIYLLTFEGHLNTYFIN 446
Cdd:PRK06473 408 QTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSN 441
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
71-399 |
1.94e-10 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 63.76 E-value: 1.94e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 71 IDPLTSIMLILITTVGILVLIYSdnYMSHDQG-YLRFFAYMGffntSMLGLVTSSNLLQIYFFWELVGMCSYLLIgfWFT 149
Cdd:PRK12668 65 VDKLSRVFGLIFGIMAFIGVIYA--LHVKDPGqHVAALLYVG----SALGAVFAGDLLTLFVFWELMAFTSTFLV--WAR 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 150 R-PIAANACQKAFVTNRVGDFGLLLGILGLFWITGSFEFqDLFEILNnvilnnrvnllflTLCAFLLFVGPIAKSAQFPL 228
Cdd:PRK12668 137 GtKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLG-------------GTAAWLILIGFGVNAAFPPL 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 229 HVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFivipsimYIISLIGLITVLLGATLALAQKDIKRGLAY***** 308
Cdd:PRK12668 203 HAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGT-------ELLIYIGAAMAVYGVFFALLENDLRRLLSY----- 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 309 *******************LI--------------------THAHS------KALLFLGSGSIIHsmeaVVGYSpdksqN 362
Cdd:PRK12668 271 ------------------HIVsqvgymvagigigtalaingAVAHAfnhilyKGLLFMSAGAVLY----RTGTE-----K 323
|
330 340 350
....*....|....*....|....*....|....*..
gi 525677331 363 MILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSK 399
Cdd:PRK12668 324 LTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSK 360
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
71-438 |
9.58e-09 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 58.30 E-value: 9.58e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 71 IDPLTSIMLILITTVGILVLIYSDNYMSHDQ----GYLrffayMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGf 146
Cdd:PRK08042 58 ISPLNAIWLITLGLCGLFVSLFNIDWHRHAQvkanGLL-----INLLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTG- 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 147 wftrpiaanaCQKA----FVTNRVGDFGLLLGILGLFWITGSFEFQDLFEILNNVILNNRVNLLFLTlcAFLLFVGPIak 222
Cdd:PRK08042 132 ----------NSKEgklwFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVI--GFGLLAGII-- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 223 saqfPLHVWLPDAMEGPTPISALIHAATMVAAGIF------LVARLLPLFIVIpsimyIISLIGLITVLLGATLALAQKD 296
Cdd:PRK08042 198 ----PLHGWVPQAHANASAPAAALFSTVVMKIGLLgiltlsLLGGNAPLWWGV-----ALLVLGMITAFVGGLYALMEHN 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 297 IKRGLAY--------------************************LITHAHSKALLFLGSGSIIHSmeavVGYspdksQN 362
Cdd:PRK08042 269 IQRLLAYhtlenigiillglgAGVTGIALEQPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFR----TGH-----RD 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 363 MILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEI------LNDSLLF-----SPSFAIIAYLTAGLTAFYMFRI 431
Cdd:PRK08042 340 IEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFvarllGPLLAVGLAITGALAVMCMAKV 419
|
....*..
gi 525677331 432 YLLTFEG 438
Cdd:PRK08042 420 YGVTFLG 426
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
208-399 |
1.19e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 58.06 E-value: 1.19e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 208 LTLCAFLLFVGPIaKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGLITVLL 286
Cdd:PRK12665 209 TALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVV 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 287 GATLALAQKDIKRGLAY************************LITHAHS---KALLFLGSGSIihsmEAVVGyspdkSQNM 363
Cdd:PRK12665 287 GILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHitvQTTLFLVVGLI----ERQAG-----SSSL 357
|
170 180 190
....*....|....*....|....*....|....*.
gi 525677331 364 ILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSK 399
Cdd:PRK12665 358 RRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGK 393
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
69-436 |
4.15e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 53.22 E-value: 4.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 69 YFIDPLtSIMLILITTVG-ILVLIYSDNYMSH-------DQGYLRFFaYMGFfntSMLGLVT-----SSNLLQIYFFWEL 135
Cdd:PRK08676 59 LFIDHL-GIFVVLIASVVfILAALYARGYVDHllsngelDPENLKVF-YLGF---NLLLSVItfaffSDNLALFWIFAEL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 136 VGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILglfwitgsfefqdLFEI---------LNNVILNNRVNLL 206
Cdd:PRK08676 134 TTVFSAMLIAILSARENIDAALKYIFIASTAMIFAFIGLIF-------------LFSLtrqalgtgtLNWTELAAHASLL 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 207 ---FLTLCAFLLFVGPIAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFI---VIPSIMYIISLI 279
Cdd:PRK08676 201 spsVLGASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 280 GLITVLLGATLALAQKDIKRGLAY************************L---ITHAHSKALLFLGSGsIIHSMeavvgYS 356
Cdd:PRK08676 280 GIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLfhmLAHSLVKSGLFFSAG-ILHRQ-----YR 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 357 PDKSQNmilMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPSFAIIAYLTAGLTAFYMFRIYLLTF 436
Cdd:PRK08676 354 SDRFDR---IFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFLLKAF 430
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
69-436 |
4.31e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 53.11 E-value: 4.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 69 YFIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLrFFAYMGFfnTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWF 148
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYV-FLMLMGL--ASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASG 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 149 TRPiAANACQKAFVTNRVGDFGLLLGILGLFWITGSFEFQDLfeilNNVILNNRVNLLFLtLCAFLLFVGPIAKSAQFPL 228
Cdd:PRK06277 145 TEE-AYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDI----HNALLVNPTSPVIY-GGLLLLIFGLLYGSGLPPF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 229 HVWLPDAMEGPTP-ISALIHA---ATMVAAGIFLVaRLLPLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY* 304
Cdd:PRK06277 219 HTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYH 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 305 ***********************L---ITHAHSKALLFLGSGSIihsmeavvgYSPDKSQNMILMGGLTKHVPITKTAFL 381
Cdd:PRK06277 298 AISQGGYVAAGLALGTPLGIVAGIfhaINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVAFMVL 368
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 525677331 382 VGTLSLCGIPPLACFWSKDEILNDSLLFS-PSFAIIAYLTAGLTAFYMFRIYLLTF 436
Cdd:PRK06277 369 CAKLAISGVPPFNGFQSKLMLAQAAMQANmPELAIIMIIVSIGTFVSMMKAFYLIY 424
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
116-399 |
8.64e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 51.57 E-value: 8.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 116 SMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLFWITGSFEFQDLFEILN 195
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 196 NVILNNRVNLLFLTLcafLLFVGPIAKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLvarllpLFIVIPSIMY 274
Cdd:MTH00196 85 SGQSFSSVSVPIGYL---LIIVALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFS------ILVSIGLNVN 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 275 IISLIGLITVLLGATLALAQKDIKRGLAY************************LIthahskaLLFLGSGSIIHSMEAVVG 354
Cdd:MTH00196 154 ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLV-------YLFIYIIMSICVFSIILA 226
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 525677331 355 YSPDKSQnMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSK 399
Cdd:MTH00196 227 LNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGK 270
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
24-303 |
9.65e-07 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 51.93 E-value: 9.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 24 FLSIFFLSIVMIF-------SFYLSIQQIFIScIHQTVWSWTINNEFSFEFGYFIDPLTSIMLILITTVGILVLIYSDNY 96
Cdd:CHL00049 24 FGLILLLMIDLTSdqkdipwLYFISSTSLVMS-ITALLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 97 MSHDQGYLRFFayMGFFNTSMLG---LVTSSNLLQIYFFWELVGMCSYLLIGFwFTRPIAANACQKAFVTnrVGDFGLLL 173
Cdd:CHL00049 103 IECTEMAITEF--LLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY-TKKDVRSNEATMKYLL--MGGASSSI 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 174 GILGLFWITGSF--EFQdLFEILNNVILNNRVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEG-PTPISALIhAAT 250
Cdd:CHL00049 178 LVYGFSWLYGLSggEIE-LQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPVVAFL-SVT 255
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 525677331 251 MVAAGIFLVARLLPlfIVIPSIM----YIISLIGLITVLLGATLALAQKDIKRGLAY 303
Cdd:CHL00049 256 SKVAASALATRIFD--IPFYFSSnewhLLLEILAILSMILGNLIAITQTSMKRMLAY 310
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
222-435 |
8.33e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 48.87 E-value: 8.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 222 KSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFLV----------ARLLPLFIVIPSIMYIIslIGLITVLLGATL 290
Cdd:PRK12561 198 KLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLKmggyalirfnVQMLPDAHVYFAPALAI--LGVVNIIYGALN 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 291 ALAQKDIKRGLAY****---********************LITHAHSKALLFLGSGsiihsmeavVGYSPDKSQNMILMG 367
Cdd:PRK12561 269 AFAQDNVKRRLAYSSVShmgFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTG---------VTYERTHTLSIPNMG 339
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 525677331 368 GLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEI---LNDSLLFSPSF-AIIAYLTA-GLTafyMFRIYLLT 435
Cdd:PRK12561 340 GLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgITSSDVYSSTFrTITILLAAvGLI---LTPIYLLS 409
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
207-303 |
1.43e-05 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 48.12 E-value: 1.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 207 FLTLCAFLLFVGPIA-KSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLVARLLPLfiVIPSI----MYIISLIG 280
Cdd:PRK02504 207 LGLALALVFVIAGIAfKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLLVT--AFPSFdeqwKLLFTALA 283
|
90 100
....*....|....*....|...
gi 525677331 281 LITVLLGATLALAQKDIKRGLAY 303
Cdd:PRK02504 284 ILSMVLGNVVALAQTSMKRMLAY 306
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
25-403 |
3.32e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 46.93 E-value: 3.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 25 LSIFFLSIVMIFSFYLSIQQIFIScIHQTVWSWTINNEFSFEFGYFIdplTSIMLILITTVGILVLIYSDNYMShdQGYL 104
Cdd:MTH00199 24 LSTLKLSIGVLLLIGLIVELNSLN-LFQSDKVLDGTNGLLLTNSWII---ISKIIIIIGSISILLMGSGETILS--EGGQ 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 105 RFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLFWITGS 184
Cdd:MTH00199 98 SSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGE 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 185 FEFQDlfeilNNVILNNRVNLLFLTLCafLLFvgpiaKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFlvarll 263
Cdd:MTH00199 178 TSIQG-----INSILTGDVGKILITIS--LLF-----KLSAAPFHMWAPDVYEGaPTITTALL--ATVPKIGVF------ 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 264 PLFIVIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY************************LItHAHSKALLFLGSG 343
Cdd:MTH00199 238 SILVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLI-YMIIYVIMSICSF 316
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 344 SIIHSMEAVVGYspdksqnMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEIL 403
Cdd:MTH00199 317 SIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
25-303 |
1.93e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 44.78 E-value: 1.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 25 LSIFFLSIvmIFSFYLSIQQIFISCIHQTVWSWTINNEFSFEFGYFIdpltsimlILITTVGILVLIYSDNYmSHDQGYL 104
Cdd:PRK06459 6 LPVFLISI--LLSIFNKKASYILTMISSIILLITSIYEYNGVLSFFS--------IISTIVWILASLYSIEY-DHYGKWL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 105 RffAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGfwftrpIAANACQKAFVTNRVGDFGLLLG---ILGLFWI 181
Cdd:PRK06459 75 S--SLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIA------LTKKNKRPAFVFMAFGELSTVLIlagFAWAFII 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 182 TGSFEFqdlfeilnnVILNNRVNLLFLTLcafllfvGPIAKSAQFPLHV--WLPDAMEGPTPISALIHAATMVAAGIFLV 259
Cdd:PRK06459 147 SGTTNF---------SYLPSPVPLILASF-------GFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGI 210
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 525677331 260 ARLLPLFIVIPS--IMYIISLIGLITVLLGATLALAQKDIKRGLAY 303
Cdd:PRK06459 211 LKMTILTQTIPIgyFGLTILAIGAFSILFGALYAYVSENVKGLLAF 256
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-303 |
2.34e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 44.00 E-value: 2.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 48 SCIHQTVWSWTINN-EFSFEFGYFIDPLTSIMLILITTVGILVLIYSDN--------YMSHDQGYLrFFAYMGFFNTSML 118
Cdd:PRK06591 51 SIIQNTELSYTMGGwTSKIGIEYRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYL 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 119 GLVTSSNLLQIYFFWELVGMCSYLLIGFWfTRPIAANACQKAFVTNRVGDFGLLLGILGLFWITGSFEFQDLFEilnnvI 198
Cdd:PRK06591 130 GMIATNDFFNLYVFIEISALSSYVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAA-----Y 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 199 LNNRVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSI----MY 274
Cdd:PRK06591 204 LQEHTNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYETIktaiTN 283
|
250 260
....*....|....*....|....*....
gi 525677331 275 IISLIGLITVLLGATLALAQKDIKRGLAY 303
Cdd:PRK06591 284 FIRPIALATLIIAPYFAYQAKNFKNIIIY 312
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
25-303 |
5.74e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 43.13 E-value: 5.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 25 LSIFFLSIVMIFSFYLSIQQIFISCIhqtvwSWTINNEFSFEFGYFIDPLTSIML------ILITTVGILVLIYSDNYMs 98
Cdd:MTH00204 37 LAILFSTLVLWGAFDGEGQFQFINLI-----EWIISPTLNFQWGPLVFAVDGVSLffilltTLLIPICILISWKSIKFL- 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 99 hdqgYLRFFAYMGFFNTSMLGLVTSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGL 178
Cdd:MTH00204 111 ----FKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQL 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 179 FWITGSFEFQdlfeILNNVILNnrVNLLFLTLCAFllFVGPIAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIF 257
Cdd:MTH00204 187 YSITGTTDYQ----ILLNIKLP--LSIQKWLLVGF--FLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYG 258
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 525677331 258 LVARLLPLFIVIPSIMY-IISLIGLITVLLGATLALAQKDIKRGLAY 303
Cdd:MTH00204 259 FLRFSWPLFPAASEYFApLIVMLSVIAVIYGSLTTCRQVDFKRLIAY 305
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
222-431 |
1.10e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 42.15 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 222 KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVArllplfIVIPSIMYIIslIGLITVLLGATLALAQKDIKRG 300
Cdd:MTH00198 312 KLAAAPFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTS------LVITSKLLLS--VAIISLVVGAFGALNQTRIKRL 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 301 LAY************************LiTHAHSKALLFLGSGSIIHSMEAVVGYSPDKSQNMILMGG------------ 368
Cdd:MTH00198 384 LAYSGIGHIGFILIGVSAGTYESLQASW-TYAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGSFGNynlvrrlvdlti 462
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 525677331 369 LTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSL--LFSPSF------AIIAYLTAGLTAFYMFRI 431
Cdd:MTH00198 463 LSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIkiAFSSSLsiyylvALFAIICTCISAFYYIRI 533
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
125-303 |
1.19e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 41.83 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 125 NLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLFWITGSFEFQDLFEIlNNVILNNRVN 204
Cdd:MTH00226 152 DIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQK 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 205 LLFLTlcaflLFVGPIAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPSIMYIISLIGLI 282
Cdd:MTH00226 231 WIFLG-----IFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILpLGAQNLAPAVIAMGIV 305
|
170 180
....*....|....*....|.
gi 525677331 283 TVLLGATLALAQKDIKRGLAY 303
Cdd:MTH00226 306 GIVYGSFATCRQIDVKRLVAY 326
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
2-448 |
1.20e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 41.85 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 2 ILLGVGLLLFPTATKNLRRMWTFLSIFFLSIVMIFSFYLSIQQIFIScihqtvwswtinnefSFEFGYFIDPLTSIMLIL 81
Cdd:MTH00206 3 LIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWS---------------FSNLYLSYDPLSSPLVIL 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 82 ITTVGILVLIYSDNYMsHDQGYLRFFAYMGFFNTSMLGLV---TSSNLLQIYFFWELVGMCSYLLIGFWFTRPIAANACQ 158
Cdd:MTH00206 68 SCWLLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGY 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 159 KAFVTNRVGDFGLLLGILglfWITGSFEFQDLFEILNNVILNNRVNLLFltlcaFLLFVGPIAKSAQFPLHVWLPDA-ME 237
Cdd:MTH00206 147 YFLFYTLIGSLPLLIALL---FLQNSLGSLSLYILYFSKLTTWNNNLWW-----LACILAFLVKLPLYGVHLWLPKAhVE 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 238 GPTpisalihAATMVAAGIFL------VARLLPLFI-VIPSIMYIISLIGLITVLLGATLALAQKDIKRGLAY******* 310
Cdd:MTH00206 219 APV-------AGSMVLAGVLLklggygMMRIILILGpSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMS 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 311 *****************LIthahskalLFLGSGSIIHSMEAVVG--YSPDKSQNMILMGGLTKHVPITKTAFLVGTLSLC 388
Cdd:MTH00206 292 LVTAGILSGSPWGFKGALL--------LMIAHGLVSSALFCLANllYERSHTRTILGNRGLQMILPLLSFWWLLFFLANL 363
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 389 GIPPLACFWSKDEILNDSLLFSPSFAIIAYLTAGLTAFYMFRIYLLTFEGHLNTYFINYS 448
Cdd:MTH00206 364 GLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLS 423
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
212-425 |
5.55e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 39.83 E-value: 5.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 212 AFLLFVGPIAKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLLPLF----------IVIPSIMYiislIG 280
Cdd:PRK12666 213 AALLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLfgpeagasagFGQDWLLP----GG 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 281 LITVLLGATLALAQKDIKRGLAY************************LITHAHSK---ALLFL-----------GSGSII 346
Cdd:PRK12666 287 LATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTlaaAALFLladlverqrgaAADRLA 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 525677331 347 HSMEAvvgYSPDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSK----DEILNDSLLFSPSFAIIAYLTAG 422
Cdd:PRK12666 367 VTPEL---YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKfallQALLNPPGAGAAWWLWALVLLSG 443
|
...
gi 525677331 423 LTA 425
Cdd:PRK12666 444 LAA 446
|
|
| |
