|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
2-371 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 794.63 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 2 THPLLKIANDALVDLPAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANG 81
Cdd:MTH00131 7 THPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANG 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 82 ASFFFICIYMHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWG 161
Cdd:MTH00131 87 ASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 162 GFSVDNATLTRFFAFHFLLPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLFALISIALFS 241
Cdd:MTH00131 167 GFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFS 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 242 PNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLSSILVLMVVPILHTSKQRSLTFRPLTQFLFW 321
Cdd:MTH00131 247 PNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFW 326
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 514257608 322 LLVADVAILTWIGGMPVEHPFVIIGQIASFLYFFLFLVLTPAVSWLENKV 371
Cdd:MTH00131 327 TLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKA 376
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
17-368 |
1.05e-128 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 374.51 E-value: 1.05e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 17 PAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYMHIGRG 96
Cdd:COG1290 31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 97 LYYGSylYKE----TWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWGGFSVDNATLTR 172
Cdd:COG1290 111 FFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNR 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 173 FFAFH-FLLPFIIAAATMVHLIFLHETGSNNPTG----LNSDADKISFHPYFSYKDLLGFAALLFALISIALFSPNllGD 247
Cdd:COG1290 189 FFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NP 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 248 PDNFTPANPLVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLSSILVLMVVPILHTSKQRSLTFRPLTQFLFWLLVA 325
Cdd:COG1290 267 PPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIV 346
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 514257608 326 DVAILTWIGGMPVehPFVIIGQIASFLYFFLFLVLTPAVSWLE 368
Cdd:COG1290 347 FFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
4-201 |
4.84e-97 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 286.96 E-value: 4.84e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 4 PLLKIANDALVDLPAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGAS 83
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 84 FFFICIYMHIGRGLYYGSY--LYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWG 161
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 514257608 162 GFSVDNATLTRFFAFHFLLPFIIAAATMVHLIFLHETGSN 201
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
13-199 |
4.22e-88 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 263.86 E-value: 4.22e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 13 LVDLPAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYMH 92
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 93 IGRGLYYG--SYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWGGFSVDNATL 170
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 514257608 171 TRFFAFHFLLPFIIAAATMVHLIFLHETG 199
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
234-325 |
7.10e-11 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 60.20 E-value: 7.10e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 234 LISIALFSPNLLGDPdnftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLSSILVLMVVPILHTSKQRSLTFR 313
Cdd:TIGR01156 51 VVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFR 125
|
90
....*....|....*
gi 514257608 314 ---PLTQFLFWLLVA 325
Cdd:TIGR01156 126 rpvATTVFLFGTVVA 140
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
2-371 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 794.63 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 2 THPLLKIANDALVDLPAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANG 81
Cdd:MTH00131 7 THPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANG 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 82 ASFFFICIYMHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWG 161
Cdd:MTH00131 87 ASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 162 GFSVDNATLTRFFAFHFLLPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLFALISIALFS 241
Cdd:MTH00131 167 GFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFS 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 242 PNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLSSILVLMVVPILHTSKQRSLTFRPLTQFLFW 321
Cdd:MTH00131 247 PNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFW 326
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 514257608 322 LLVADVAILTWIGGMPVEHPFVIIGQIASFLYFFLFLVLTPAVSWLENKV 371
Cdd:MTH00131 327 TLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKA 376
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
2-371 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 711.29 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 2 THPLLKIANDALVDLPAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANG 81
Cdd:MTH00119 8 SHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANG 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 82 ASFFFICIYMHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWG 161
Cdd:MTH00119 88 ASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWG 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 162 GFSVDNATLTRFFAFHFLLPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLFALISIALFS 241
Cdd:MTH00119 168 GFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFS 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 242 PNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLSSILVLMVVPILHTSKQRSLTFRPLTQFLFW 321
Cdd:MTH00119 248 PNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFW 327
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 514257608 322 LLVADVAILTWIGGMPVEHPFVIIGQIASFLYFFLFLVLTPAVSWLENKV 371
Cdd:MTH00119 328 TLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKM 377
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
2-370 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 699.90 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 2 THPLLKIANDALVDLPAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANG 81
Cdd:MTH00074 8 THPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANG 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 82 ASFFFICIYMHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWG 161
Cdd:MTH00074 88 ASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWG 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 162 GFSVDNATLTRFFAFHFLLPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLFALISIALFS 241
Cdd:MTH00074 168 GFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFS 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 242 PNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLSSILVLMVVPILHTSKQRSLTFRPLTQFLFW 321
Cdd:MTH00074 248 PNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFW 327
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 514257608 322 LLVADVAILTWIGGMPVEHPFVIIGQIASFLYFFLFLVLTPAVSWLENK 370
Cdd:MTH00074 328 LLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENK 376
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
2-371 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 690.22 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 2 THPLLKIANDALVDLPAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANG 81
Cdd:MTH00100 7 THPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANG 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 82 ASFFFICIYMHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWG 161
Cdd:MTH00100 87 ASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 162 GFSVDNATLTRFFAFHFLLPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLFALISIALFS 241
Cdd:MTH00100 167 GFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFS 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 242 PNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLSSILVLMVVPILHTSKQRSLTFRPLTQFLFW 321
Cdd:MTH00100 247 PDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFW 326
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 514257608 322 LLVADVAILTWIGGMPVEHPFVIIGQIASFLYFFLFLVLTPAVSWLENKV 371
Cdd:MTH00100 327 LLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNL 376
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
2-350 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 672.01 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 2 THPLLKIANDALVDLPAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANG 81
Cdd:MTH00191 4 THPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANG 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 82 ASFFFICIYMHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWG 161
Cdd:MTH00191 84 ASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWG 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 162 GFSVDNATLTRFFAFHFLLPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLFALISIALFS 241
Cdd:MTH00191 164 GFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFS 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 242 PNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLSSILVLMVVPILHTSKQRSLTFRPLTQFLFW 321
Cdd:MTH00191 244 PNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFW 323
|
330 340
....*....|....*....|....*....
gi 514257608 322 LLVADVAILTWIGGMPVEHPFVIIGQIAS 350
Cdd:MTH00191 324 LWVANFILLTWLGGQPVEDPFILLGQISS 352
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
6-348 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 644.53 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 6 LKIANDALVDLPAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFF 85
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 86 FICIYMHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWGGFSV 165
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 166 DNATLTRFFAFHFLLPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLFALISIALFSPNLL 245
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 246 GDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLSSILVLMVVPILHTSKQRSLTFRPLTQFLFWLLVA 325
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340
....*....|....*....|...
gi 514257608 326 DVAILTWIGGMPVEHPFVIIGQI 348
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQI 343
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
2-371 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 620.96 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 2 THPLLKIANDALVDLPAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANG 81
Cdd:MTH00034 7 SHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANG 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 82 ASFFFICIYMHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWG 161
Cdd:MTH00034 87 ASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 162 GFSVDNATLTRFFAFHFLLPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLFALISIALFS 241
Cdd:MTH00034 167 GFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLF 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 242 PNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLSSILVLMVVPILHTSKQRSLTFRPLTQFLFW 321
Cdd:MTH00034 247 PTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFW 326
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 514257608 322 LLVADVAILTWIGGMPVEHPFVIIGQIASFLYFFLFLVLTPAVSWLENKV 371
Cdd:MTH00034 327 LLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKL 376
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
2-350 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 613.07 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 2 THPLLKIANDALVDLPAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANG 81
Cdd:MTH00145 8 SHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANG 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 82 ASFFFICIYMHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWG 161
Cdd:MTH00145 88 ASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWG 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 162 GFSVDNATLTRFFAFHFLLPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLFALISIALFS 241
Cdd:MTH00145 168 GFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFF 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 242 PNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLSSILVLMVVPILHTSKQRSLTFRPLTQFLFW 321
Cdd:MTH00145 248 PNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFW 327
|
330 340
....*....|....*....|....*....
gi 514257608 322 LLVADVAILTWIGGMPVEHPFVIIGQIAS 350
Cdd:MTH00145 328 IFVGNFFILTWIGACPVEEPYETIGQVFT 356
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
2-348 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 577.78 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 2 THPLLKIANDALVDLPAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANG 81
Cdd:MTH00016 8 THPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANG 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 82 ASFFFICIYMHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWG 161
Cdd:MTH00016 88 ASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWG 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 162 GFSVDNATLTRFFAFHFLLPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLFALISIALFS 241
Cdd:MTH00016 168 GFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLW 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 242 PNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLSSILVLMVVPILHTSKQRSLTFRPLTQFLFW 321
Cdd:MTH00016 248 PNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFW 327
|
330 340
....*....|....*....|....*..
gi 514257608 322 LLVADVAILTWIGGMPVEHPFVIIGQI 348
Cdd:MTH00016 328 LLVSNFLLLTWIGGRPVEPPYEFLGQI 354
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
3-371 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 523.11 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 3 HPLLKIANDALVDLPAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGA 82
Cdd:MTH00022 7 NPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 83 SFFFICIYMHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWGG 162
Cdd:MTH00022 87 SLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 163 FSVDNATLTRFFAFHFLLPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLFALISIALFSP 242
Cdd:MTH00022 167 FSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAP 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 243 NLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLSSILVLMVVPILHTSKQRSLTFRPLTQFLFWL 322
Cdd:MTH00022 247 NLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWF 326
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 514257608 323 LVADVAILTWIGGMPVEHPFVIIGQIASFLYFFLFLVLTPAVSWLENKV 371
Cdd:MTH00022 327 LIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQL 375
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-348 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 515.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 1 ETHPLLKIANDALVDLPAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHAN 80
Cdd:MTH00224 7 TTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHAN 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 81 GASFFFICIYMHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIW 160
Cdd:MTH00224 87 GASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIW 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 161 GGFSVDNATLTRFFAFHFLLPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLFALISIALF 240
Cdd:MTH00224 167 GGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLF 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 241 SPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLSSILVLMVVPILHTSKQRSLTFRPLTQFLF 320
Cdd:MTH00224 247 EPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLF 326
|
330 340
....*....|....*....|....*...
gi 514257608 321 WLLVADVAILTWIGGMPVEHPFVIIGQI 348
Cdd:MTH00224 327 WLLVTSWAILTWIGGRPVEDPFEGIGQV 354
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
4-371 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 511.17 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 4 PLLKIANDALVDLPAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGAS 83
Cdd:MTH00053 10 PVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGAS 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 84 FFFICIYMHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWGGF 163
Cdd:MTH00053 90 MFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGF 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 164 SVDNATLTRFFAFHFLLPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLFALISIALFSPN 243
Cdd:MTH00053 170 SVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPY 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 244 LLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLSSILVLMVVPILHTSKQRSLTFRPLTQFLFWLL 323
Cdd:MTH00053 250 SLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFL 329
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 514257608 324 VADVAILTWIGGMPVEHPFVIIGQIASFLYFFLFLVLTPAVSWLENKV 371
Cdd:MTH00053 330 VGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKL 377
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
5-369 |
4.86e-141 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 405.86 E-value: 4.86e-141
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 5 LLKIANDaLVDLPAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASF 84
Cdd:MTH00033 8 LLEPVND-IIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 85 FFICIYMHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWGGFS 164
Cdd:MTH00033 87 FFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFS 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 165 VDNATLTRFFAFHFLLPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAAL--LFALISIALFSP 242
Cdd:MTH00033 167 VSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILfgVFVIIGIEPRIE 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 243 NLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLSSILVLMVVPILHTSKQRSLTFRPLTQFLFWL 322
Cdd:MTH00033 247 TLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWF 326
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 514257608 323 LVADVAILTWIGGMPV-EHPFVIIGQIASFLYFFLFLVLTPAVSWLEN 369
Cdd:MTH00033 327 IVGDFIILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSN 374
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
10-350 |
8.87e-129 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 373.51 E-value: 8.87e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 10 NDALVDLPAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICI 89
Cdd:MTH00086 4 NSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 90 YMHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWGGFSVDNAT 169
Cdd:MTH00086 84 YLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSAT 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 170 LTRFFAFHFLLPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLFaLISIALFSPNLLGDPD 249
Cdd:MTH00086 164 LKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWLV-FIIFSLFYPFNLGDPE 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 250 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLSSILVLMVVPILHTSKQrslTFRPLTQFLFWLLVADVAI 329
Cdd:MTH00086 243 MFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNYTS---CLNKLNKFLVFSFIVVNVI 319
|
330 340
....*....|....*....|.
gi 514257608 330 LTWIGGMPVEHPFVIIGQIAS 350
Cdd:MTH00086 320 LSWLGQCLVEYPFLFLSQIFS 340
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
17-368 |
1.05e-128 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 374.51 E-value: 1.05e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 17 PAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYMHIGRG 96
Cdd:COG1290 31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 97 LYYGSylYKE----TWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWGGFSVDNATLTR 172
Cdd:COG1290 111 FFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNR 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 173 FFAFH-FLLPFIIAAATMVHLIFLHETGSNNPTG----LNSDADKISFHPYFSYKDLLGFAALLFALISIALFSPNllGD 247
Cdd:COG1290 189 FFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NP 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 248 PDNFTPANPLVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLSSILVLMVVPILHTSKQRSLTFRPLTQFLFWLLVA 325
Cdd:COG1290 267 PPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIV 346
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 514257608 326 DVAILTWIGGMPVehPFVIIGQIASFLYFFLFLVLTPAVSWLE 368
Cdd:COG1290 347 FFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
4-201 |
4.84e-97 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 286.96 E-value: 4.84e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 4 PLLKIANDALVDLPAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGAS 83
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 84 FFFICIYMHIGRGLYYGSY--LYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWG 161
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 514257608 162 GFSVDNATLTRFFAFHFLLPFIIAAATMVHLIFLHETGSN 201
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
13-350 |
1.48e-93 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 283.80 E-value: 1.48e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 13 LVDLPAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYMH 92
Cdd:MTH00046 9 LIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIH 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 93 IGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWGGFSVDNATLTR 172
Cdd:MTH00046 89 MGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 173 FFAFHFLLPFIIAAATMVHLIFLHETGSNNPTGL-NSDADKISFHPYFSYKDLLGFAALLFALISIALFSPNLLGDPDNF 251
Cdd:MTH00046 169 VFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAY 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 252 TPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGvLALLSSILVLMVVPilhtSKQRSLTFRPLTQFLFWLLVADVAILT 331
Cdd:MTH00046 249 LEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVP----TFNGSSVYSVWRQVNFWLIVSLFFSLS 323
|
330
....*....|....*....
gi 514257608 332 WIGGMPVEHPFVIIGQIAS 350
Cdd:MTH00046 324 YLGGCHPEYPYLLISQLFS 342
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
13-199 |
4.22e-88 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 263.86 E-value: 4.22e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 13 LVDLPAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYMH 92
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 93 IGRGLYYG--SYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWGGFSVDNATL 170
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 514257608 171 TRFFAFHFLLPFIIAAATMVHLIFLHETG 199
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
202-349 |
2.39e-55 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 178.22 E-value: 2.39e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 202 NPTGLNSDADKISFHPYFSYKDLLGFAALLFALISIALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPN 281
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 514257608 282 KLGGVLALLSSILVLMVVPILHTSKQRSlTFRPLTQFLFWLLVADVAILTWIGGMPVEHPFVIIGQIA 349
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
83-248 |
2.87e-51 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 168.57 E-value: 2.87e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 83 SFFFICIYMHIGRGLYYGSYLYKE--TWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIW 160
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 161 GGFSVDNATLTRFFAFHF-LLPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLFALISIAL 239
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 514257608 240 FSPNLLGDP 248
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
253-350 |
1.03e-46 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 154.56 E-value: 1.03e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 253 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLSSILVLMVVPILHTSKQRSLTFRPLTQFLFWLLVADVAILTW 332
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90
....*....|....*...
gi 514257608 333 IGGMPVEHPFVIIGQIAS 350
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIAT 98
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
17-203 |
7.38e-40 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 140.62 E-value: 7.38e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 17 PAPVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYMHIGRG 96
Cdd:PRK03735 33 PAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 97 LYYGSYLYKE--TWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWGGFSVDNATLTRFF 174
Cdd:PRK03735 113 FFTGGYKKPRelNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFF 192
|
170 180 190
....*....|....*....|....*....|
gi 514257608 175 AFH-FLLPFIIAAATMVHLIFLHETGSNNP 203
Cdd:PRK03735 193 AIHvFFLPWALAVLMLAHFLMIRKQGISGP 222
|
|
| petB |
CHL00070 |
cytochrome b6 |
19-203 |
1.16e-32 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 121.75 E-value: 1.16e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 19 PVNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYMHIGRGLY 98
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 99 YGSYLYKE--TWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNALVQWIWGGFSVDNATLTRFFAF 176
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*...
gi 514257608 177 H-FLLPFIIAAATMVHLIFLHETGSNNP 203
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGP 214
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
231-324 |
1.92e-12 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 64.81 E-value: 1.92e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 231 LFALISIALFSPNLLGDPdnftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLSSILVLMVVPILHTSKQRSL 310
Cdd:COG5679 49 IALCIGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQN 123
|
90
....*....|....*..
gi 514257608 311 TFR---PLTQFLFWLLV 324
Cdd:COG5679 124 PFRrpvATAVFLFGTLV 140
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
231-325 |
7.38e-12 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 63.10 E-value: 7.38e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 231 LFALISIALFSPNLLGDPdnftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLSSILVLMVVPILHTSKQRSL 310
Cdd:CHL00058 48 IACNVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENVNKFQN 122
|
90
....*....|....*...
gi 514257608 311 TFR---PLTQFLFWLLVA 325
Cdd:CHL00058 123 PFRrpvATTVFLIGTAVA 140
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
234-325 |
7.10e-11 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 60.20 E-value: 7.10e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514257608 234 LISIALFSPNLLGDPdnftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLSSILVLMVVPILHTSKQRSLTFR 313
Cdd:TIGR01156 51 VVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFR 125
|
90
....*....|....*
gi 514257608 314 ---PLTQFLFWLLVA 325
Cdd:TIGR01156 126 rpvATTVFLFGTVVA 140
|
|
| |
