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Conserved domains on  [gi|540392969|gb|AFR92726|]
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hypothetical protein CNAG_00596 [Cryptococcus neoformans var. grubii H99]

Protein Classification

ChtBD1 and GH16_fungal_CRH1_transglycosylase domain-containing protein( domain architecture ID 10345025)

ChtBD1 and GH16_fungal_CRH1_transglycosylase domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
GH16_fungal_CRH1_transglycosylase cd02183
glycosylphosphatidylinositol-glucanosyltransferase; Group of fungal GH16 members related to ...
 93-306 3.12e-89

glycosylphosphatidylinositol-glucanosyltransferase; Group of fungal GH16 members related to Saccharomyces cerevisiae Crh1p. Chr1p and Crh2p are transglycosylases that are required for the linkage of chitin to beta(1-3)glucose branches of beta(1-6)glucan, an important step in the assembly of new cell wall. Both have been shown to be glycosylphosphatidylinositol (GPI)-anchored. A third homologous protein, Crr1p, functions in the formation of the spore wall. They belongs to the family 16 of glycosyl hydrolases that includes lichenase, xyloglucan endotransglycosylase (XET), beta-agarase, kappa-carrageenase, endo-beta-1,3-glucanase, endo-beta-1,3-1,4-glucanase, and endo-beta-galactosidase, all of which have a conserved jelly roll fold with a deep active site channel harboring the catalytic residues.


:

Pssm-ID: 185692 [Multi-domain]  Cd Length: 203  Bit Score: 267.11  E-value: 3.12e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969  93 YDGNATAYDWVVNTGSLiaSSDNDGARLILTQNNTGSKISSTRYLHYGTIDFTLQTSKWAGVVTAAITMSDVKDEIDWEW 172
Cdd:cd02183    3 FTGNASSYDWTVTSGTV--DYDDDGASLTIPKRGDGPTISSTFYIFYGKVEVTMKAAPGQGIVSSFVLQSDDLDEIDWEW 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969 173 PGANTDTVQTNYWFLG-IANYsaTEGASSSVSSDTAAHFHTYTIDWQESYISWSIDGLLVRTVRKTDTisedGTQYKFPS 251
Cdd:cd02183   81 VGGDLTQVQTNYFGKGnTTTY--DRGGYHPVPNPQTEEFHTYTIDWTKDRITWYIDGKVVRTLTKADT----TGGYGYPQ 154

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 540392969 252 TPSRVQISIWPAGTDGNAQGTIDWAGGYIDWtdndylSKGYFWNTIKSVNISCAY 306
Cdd:cd02183  155 TPMRLQIGIWAGGDPSNAPGTIEWAGGETDY------DKGPFTMYVKSVTVTDYS 203
ChtBD1 super family cl16916
Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a ...
 25-71 2.09e-22

Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins such as hevein, a major IgE-binding allergen in natural rubber latex, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.


The actual alignment was detected with superfamily member cd06923:

Pssm-ID: 473047  Cd Length: 47  Bit Score: 88.96  E-value: 2.09e-22
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 540392969  25 QTCNATFLCPSTAPCCSEYGYCGTDGYCLGGCEPLYSHEVTSCRPDP 71
Cdd:cd06923    1 ITCNETSQCPEEWPCCSQYGECGTGPYCLGGCNPRYSFSLDSCMPMP 47
 
Name Accession Description Interval E-value
GH16_fungal_CRH1_transglycosylase cd02183
glycosylphosphatidylinositol-glucanosyltransferase; Group of fungal GH16 members related to ...
 93-306 3.12e-89

glycosylphosphatidylinositol-glucanosyltransferase; Group of fungal GH16 members related to Saccharomyces cerevisiae Crh1p. Chr1p and Crh2p are transglycosylases that are required for the linkage of chitin to beta(1-3)glucose branches of beta(1-6)glucan, an important step in the assembly of new cell wall. Both have been shown to be glycosylphosphatidylinositol (GPI)-anchored. A third homologous protein, Crr1p, functions in the formation of the spore wall. They belongs to the family 16 of glycosyl hydrolases that includes lichenase, xyloglucan endotransglycosylase (XET), beta-agarase, kappa-carrageenase, endo-beta-1,3-glucanase, endo-beta-1,3-1,4-glucanase, and endo-beta-galactosidase, all of which have a conserved jelly roll fold with a deep active site channel harboring the catalytic residues.


Pssm-ID: 185692 [Multi-domain]  Cd Length: 203  Bit Score: 267.11  E-value: 3.12e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969  93 YDGNATAYDWVVNTGSLiaSSDNDGARLILTQNNTGSKISSTRYLHYGTIDFTLQTSKWAGVVTAAITMSDVKDEIDWEW 172
Cdd:cd02183    3 FTGNASSYDWTVTSGTV--DYDDDGASLTIPKRGDGPTISSTFYIFYGKVEVTMKAAPGQGIVSSFVLQSDDLDEIDWEW 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969 173 PGANTDTVQTNYWFLG-IANYsaTEGASSSVSSDTAAHFHTYTIDWQESYISWSIDGLLVRTVRKTDTisedGTQYKFPS 251
Cdd:cd02183   81 VGGDLTQVQTNYFGKGnTTTY--DRGGYHPVPNPQTEEFHTYTIDWTKDRITWYIDGKVVRTLTKADT----TGGYGYPQ 154

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 540392969 252 TPSRVQISIWPAGTDGNAQGTIDWAGGYIDWtdndylSKGYFWNTIKSVNISCAY 306
Cdd:cd02183  155 TPMRLQIGIWAGGDPSNAPGTIEWAGGETDY------DKGPFTMYVKSVTVTDYS 203
Glyco_hydro_16 pfam00722
Glycosyl hydrolases family 16;
111-277 7.14e-51

Glycosyl hydrolases family 16;


Pssm-ID: 395585 [Multi-domain]  Cd Length: 168  Bit Score: 167.77  E-value: 7.14e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969  111 ASSDNDGARLILTQNnTGSKISSTRYLHYGTIDFTLQTSKWAGVVTAAITMS---DVKDEIDWEWPGANTDTVQTNYWFL 187
Cdd:pfam00722   6 VSVSNGGLTLTLDKY-TGSGFQSKFYYLYGKVEARIKAARGAGVVTAFYLSSedwDDHDEIDFEFLGNDTGQVQTNVYGN 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969  188 GIANYSateGASSSVSSDTAAHFHTYTIDWQESYISWSIDGLLVRTVRKTDTISedgtqYKFPSTPSRVQISIWPAGTDG 267
Cdd:pfam00722  85 GKGNRG---EQRFSLWFDPTADFHTYSILWNPDKITWYVDGVPVRTLKNNDAGG-----VPYPQTPMRLYVSLWPGGDWA 156

                         170
                  ....*....|..
gi 540392969  268 NAQG--TIDWAG 277
Cdd:pfam00722 157 TPGGgvKIDWAG 168
ChtBD1_GH16 cd06923
Hevein or Type 1 chitin binding domain subfamily that co-occurs with family 16 glycosyl ...
 25-71 2.09e-22

Hevein or Type 1 chitin binding domain subfamily that co-occurs with family 16 glycosyl hydrolases; This subfamily includes Saccharomyces cerevisiae Utr2p, also known as Crh2p, which participates in the cross-linking of chitin to beta(1-3)- and beta(1-6) glucan in the cell wall, and S. cerevisiae Crr1p, a putative transglycosidase which is needed for proper spore wall assembly. ChtBD1 is a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.


Pssm-ID: 211314  Cd Length: 47  Bit Score: 88.96  E-value: 2.09e-22
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 540392969  25 QTCNATFLCPSTAPCCSEYGYCGTDGYCLGGCEPLYSHEVTSCRPDP 71
Cdd:cd06923    1 ITCNETSQCPEEWPCCSQYGECGTGPYCLGGCNPRYSFSLDSCMPMP 47
BglS COG2273
Beta-glucanase, GH16 family [Carbohydrate transport and metabolism];
88-282 1.64e-12

Beta-glucanase, GH16 family [Carbohydrate transport and metabolism];


Pssm-ID: 441874 [Multi-domain]  Cd Length: 259  Bit Score: 66.94  E-value: 1.64e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969  88 QNVSLYDGNATaydwvvntgsLIASSDNDGARlilTQNNTGSKISS--TRYLHYGTIDFTLQTSKWAGVVTAAITMSD-- 163
Cdd:COG2273   67 ENVSVENGNLV----------ITARKEPYGGG---GRPYTSGRITTkgKFSFTYGRFEARAKLPKGQGLWPAFWMLGGdi 133

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969 164 -----VKDEID-WEWPGANTDTVQTNYWFLGianYSATEGASSS--VSSDTAAHFHTYTIDWQESYISWSIDGLLVRTVr 235
Cdd:COG2273  134 dggwpASGEIDiMEFVGKDPNKVHGNVHYGG---YNGGEGIGASydLPFDASDDFHTYAVEWTPDSIRWYVDGVLVHTV- 209

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 540392969 236 ktdTISEDGTQYKFpSTPSRVQISIWPAGTDGNAQGTIDWAGG-YIDW 282
Cdd:COG2273  210 ---TPADVGGPWPF-DQPFYLILNLAVGGNWPGAPDTTGFPATmEVDY 253
PLN03161 PLN03161
Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional
 116-319 1.49e-09

Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional


Pssm-ID: 178706 [Multi-domain]  Cd Length: 291  Bit Score: 58.37  E-value: 1.49e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969 116 DGARLILTQNnTGSKISSTRYLHYGTIDFTLQ--TSKWAGVVTAAITMS--DVKDEIDWEWPGANTD---TVQTNYWflg 188
Cdd:PLN03161  47 DNLQLVLDQS-SGSGIKSKRAFLFGSIEMLIKlvPGNSAGTVTAYYLSStgSRHDEIDFEFLGNVSGqpyTIHTNIY--- 122

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969 189 ianysaTEGASSSVSS-----DTAAHFHTYTIDWQESYISWSIDGLLVRTVRKTDtisEDGTQYkfPSTPS-RVQISIWP 262
Cdd:PLN03161 123 ------TQGNGSREQQfrpwfDPTADFHNYTIHWNPSEVVWYVDGTPIRVFRNYE---NEGIAY--PNKQGmRVYSSLWN 191

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 540392969 263 AGtdgnaqgtiDWA--GGY--IDWTDNDYLSKGY-------FWNTIKSVNiSCAYDTASSGATGWAYS 319
Cdd:PLN03161 192 AD---------NWAtqGGRvkIDWTLAPFVARGRrfraracKWNGPVSIK-QCADPTPSNWWTSPSYS 249
Chitin_bind_1 pfam00187
Chitin recognition protein;
32-56 4.93e-05

Chitin recognition protein;


Pssm-ID: 459705  Cd Length: 38  Bit Score: 40.22  E-value: 4.93e-05
                          10        20
                  ....*....|....*....|....*.
gi 540392969   32 LCPSTApCCSEYGYCG-TDGYCLGGC 56
Cdd:pfam00187  10 TCPNNL-CCSQYGYCGtTSDYCGDGC 34
ChtBD1 smart00270
Chitin binding domain;
27-57 4.48e-04

Chitin binding domain;


Pssm-ID: 214593  Cd Length: 38  Bit Score: 37.35  E-value: 4.48e-04
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 540392969    27 CNATF---LCPSTApCCSEYGYCG-TDGYCLGGCE 57
Cdd:smart00270   2 CGSQAggkVCPNNL-CCSQFGYCGsGDEYCGRGCQ 35
 
Name Accession Description Interval E-value
GH16_fungal_CRH1_transglycosylase cd02183
glycosylphosphatidylinositol-glucanosyltransferase; Group of fungal GH16 members related to ...
 93-306 3.12e-89

glycosylphosphatidylinositol-glucanosyltransferase; Group of fungal GH16 members related to Saccharomyces cerevisiae Crh1p. Chr1p and Crh2p are transglycosylases that are required for the linkage of chitin to beta(1-3)glucose branches of beta(1-6)glucan, an important step in the assembly of new cell wall. Both have been shown to be glycosylphosphatidylinositol (GPI)-anchored. A third homologous protein, Crr1p, functions in the formation of the spore wall. They belongs to the family 16 of glycosyl hydrolases that includes lichenase, xyloglucan endotransglycosylase (XET), beta-agarase, kappa-carrageenase, endo-beta-1,3-glucanase, endo-beta-1,3-1,4-glucanase, and endo-beta-galactosidase, all of which have a conserved jelly roll fold with a deep active site channel harboring the catalytic residues.


Pssm-ID: 185692 [Multi-domain]  Cd Length: 203  Bit Score: 267.11  E-value: 3.12e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969  93 YDGNATAYDWVVNTGSLiaSSDNDGARLILTQNNTGSKISSTRYLHYGTIDFTLQTSKWAGVVTAAITMSDVKDEIDWEW 172
Cdd:cd02183    3 FTGNASSYDWTVTSGTV--DYDDDGASLTIPKRGDGPTISSTFYIFYGKVEVTMKAAPGQGIVSSFVLQSDDLDEIDWEW 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969 173 PGANTDTVQTNYWFLG-IANYsaTEGASSSVSSDTAAHFHTYTIDWQESYISWSIDGLLVRTVRKTDTisedGTQYKFPS 251
Cdd:cd02183   81 VGGDLTQVQTNYFGKGnTTTY--DRGGYHPVPNPQTEEFHTYTIDWTKDRITWYIDGKVVRTLTKADT----TGGYGYPQ 154

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 540392969 252 TPSRVQISIWPAGTDGNAQGTIDWAGGYIDWtdndylSKGYFWNTIKSVNISCAY 306
Cdd:cd02183  155 TPMRLQIGIWAGGDPSNAPGTIEWAGGETDY------DKGPFTMYVKSVTVTDYS 203
Glyco_hydro_16 pfam00722
Glycosyl hydrolases family 16;
111-277 7.14e-51

Glycosyl hydrolases family 16;


Pssm-ID: 395585 [Multi-domain]  Cd Length: 168  Bit Score: 167.77  E-value: 7.14e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969  111 ASSDNDGARLILTQNnTGSKISSTRYLHYGTIDFTLQTSKWAGVVTAAITMS---DVKDEIDWEWPGANTDTVQTNYWFL 187
Cdd:pfam00722   6 VSVSNGGLTLTLDKY-TGSGFQSKFYYLYGKVEARIKAARGAGVVTAFYLSSedwDDHDEIDFEFLGNDTGQVQTNVYGN 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969  188 GIANYSateGASSSVSSDTAAHFHTYTIDWQESYISWSIDGLLVRTVRKTDTISedgtqYKFPSTPSRVQISIWPAGTDG 267
Cdd:pfam00722  85 GKGNRG---EQRFSLWFDPTADFHTYSILWNPDKITWYVDGVPVRTLKNNDAGG-----VPYPQTPMRLYVSLWPGGDWA 156

                         170
                  ....*....|..
gi 540392969  268 NAQG--TIDWAG 277
Cdd:pfam00722 157 TPGGgvKIDWAG 168
ChtBD1_GH16 cd06923
Hevein or Type 1 chitin binding domain subfamily that co-occurs with family 16 glycosyl ...
 25-71 2.09e-22

Hevein or Type 1 chitin binding domain subfamily that co-occurs with family 16 glycosyl hydrolases; This subfamily includes Saccharomyces cerevisiae Utr2p, also known as Crh2p, which participates in the cross-linking of chitin to beta(1-3)- and beta(1-6) glucan in the cell wall, and S. cerevisiae Crr1p, a putative transglycosidase which is needed for proper spore wall assembly. ChtBD1 is a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.


Pssm-ID: 211314  Cd Length: 47  Bit Score: 88.96  E-value: 2.09e-22
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 540392969  25 QTCNATFLCPSTAPCCSEYGYCGTDGYCLGGCEPLYSHEVTSCRPDP 71
Cdd:cd06923    1 ITCNETSQCPEEWPCCSQYGECGTGPYCLGGCNPRYSFSLDSCMPMP 47
Glyco_hydrolase_16 cd00413
glycosyl hydrolase family 16; The O-Glycosyl hydrolases are a widespread group of enzymes that ...
 79-282 6.15e-20

glycosyl hydrolase family 16; The O-Glycosyl hydrolases are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A glycosyl hydrolase classification system based on sequence similarity has led to the definition of more than 95 different families inlcuding glycosyl hydrolase family 16. Family 16 includes lichenase, xyloglucan endotransglycosylase (XET), beta-agarase, kappa-carrageenase, endo-beta-1,3-glucanase, endo-beta-1,3-1,4-glucanase, and endo-beta-galactosidase, all of which have a conserved jelly roll fold with a deep active site channel harboring the catalytic residues.


Pssm-ID: 185683 [Multi-domain]  Cd Length: 210  Bit Score: 87.11  E-value: 6.15e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969  79 DFTDLSRVQQNVSLYDGNATAyDWVVNTGSLIASSDNDGARLILTQNNTGSKISSTR------YLHYGTIDFTLQTSKWA 152
Cdd:cd00413    2 DFDGLALDTSKWTIQDGPSWG-GNMTNSPNNVYVENDGGLTLRTDRDQTDGPYSSAEidsqknNYTYGYYEARAKLAGGP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969 153 GVVTAAITMSD-----VKDEIDWEWPGANTDTVQTNY-WFLGIANYSATEGASSSVSSDTAAHFHTYTIDWQESYISWSI 226
Cdd:cd00413   81 GAVSAFWTYSDdddppDGGEIDIEFLGRDPTTVQTNVhWPGYGAGATTGEEKSVHLPFDPADDFHTYRVDWTPGEITFYV 160

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 540392969 227 DGLLVRTVRktdtisedgtqYKFPSTPSRVQISIWPAGTDGNAQGTIDWAG-GYIDW 282
Cdd:cd00413  161 DGVLVATIT-----------NQVPDDPMNIILNLWSDGGWWWGGPPPGAPAyMEIDW 206
GH16_lichenase cd02175
lichenase, member of glycosyl hydrolase family 16; Lichenase, also known as 1,3-1, ...
 115-294 4.58e-19

lichenase, member of glycosyl hydrolase family 16; Lichenase, also known as 1,3-1,4-beta-glucanase, is a member of glycosyl hydrolase family 16, that specifically cleaves 1,4-beta-D-glucosidic bonds in mixed-linked beta glucans that also contain 1,3-beta-D-glucosidic linkages. Natural substrates of beta-glucanase are beta-glucans from grain endosperm cell walls or lichenan from the Islandic moss, Cetraria islandica. This protein is found not only in bacteria but also in anaerobic fungi. This domain includes two seven-stranded antiparallel beta-sheets that are adjacent to one another forming a compact, jellyroll beta-sandwich structure.


Pssm-ID: 185684 [Multi-domain]  Cd Length: 212  Bit Score: 84.63  E-value: 4.58e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969 115 NDGARLILTQNNTGSK------ISSTRYLHYGTIDFTLQTSKWAGVVTAAITMS-----DVKDEIDWEWPGANTDTVQTN 183
Cdd:cd02175   38 DGGLALTLTNDTYGEKpyacgeYRTRGFYGYGRYEVRMKPAKGSGVVSSFFTYTgpydgDPHDEIDIEFLGKDTTKVQFN 117

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969 184 YWflgiANYSATEGASSSVSSDTAAHFHTYTIDWQESYISWSIDGLLVRTVRKTDTisedgtqyKFPSTPSRVQISIWPa 263
Cdd:cd02175  118 YY----TNGVGGHEKLIDLGFDASEGFHTYAFEWEPDSIRWYVDGELVHEATATDP--------NIPDTPGKIMMNLWP- 184

                        170       180       190
                 ....*....|....*....|....*....|.
gi 540392969 264 gTDGNAqgtiDWAGGYidwTDNDYLSKGYFW 294
Cdd:cd02175  185 -GDGVD----DWLGPF---DGGTPLTAEYDW 207
BglS COG2273
Beta-glucanase, GH16 family [Carbohydrate transport and metabolism];
88-282 1.64e-12

Beta-glucanase, GH16 family [Carbohydrate transport and metabolism];


Pssm-ID: 441874 [Multi-domain]  Cd Length: 259  Bit Score: 66.94  E-value: 1.64e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969  88 QNVSLYDGNATaydwvvntgsLIASSDNDGARlilTQNNTGSKISS--TRYLHYGTIDFTLQTSKWAGVVTAAITMSD-- 163
Cdd:COG2273   67 ENVSVENGNLV----------ITARKEPYGGG---GRPYTSGRITTkgKFSFTYGRFEARAKLPKGQGLWPAFWMLGGdi 133

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969 164 -----VKDEID-WEWPGANTDTVQTNYWFLGianYSATEGASSS--VSSDTAAHFHTYTIDWQESYISWSIDGLLVRTVr 235
Cdd:COG2273  134 dggwpASGEIDiMEFVGKDPNKVHGNVHYGG---YNGGEGIGASydLPFDASDDFHTYAVEWTPDSIRWYVDGVLVHTV- 209

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 540392969 236 ktdTISEDGTQYKFpSTPSRVQISIWPAGTDGNAQGTIDWAGG-YIDW 282
Cdd:COG2273  210 ---TPADVGGPWPF-DQPFYLILNLAVGGNWPGAPDTTGFPATmEVDY 253
PLN03161 PLN03161
Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional
 116-319 1.49e-09

Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional


Pssm-ID: 178706 [Multi-domain]  Cd Length: 291  Bit Score: 58.37  E-value: 1.49e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969 116 DGARLILTQNnTGSKISSTRYLHYGTIDFTLQ--TSKWAGVVTAAITMS--DVKDEIDWEWPGANTD---TVQTNYWflg 188
Cdd:PLN03161  47 DNLQLVLDQS-SGSGIKSKRAFLFGSIEMLIKlvPGNSAGTVTAYYLSStgSRHDEIDFEFLGNVSGqpyTIHTNIY--- 122

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969 189 ianysaTEGASSSVSS-----DTAAHFHTYTIDWQESYISWSIDGLLVRTVRKTDtisEDGTQYkfPSTPS-RVQISIWP 262
Cdd:PLN03161 123 ------TQGNGSREQQfrpwfDPTADFHNYTIHWNPSEVVWYVDGTPIRVFRNYE---NEGIAY--PNKQGmRVYSSLWN 191

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 540392969 263 AGtdgnaqgtiDWA--GGY--IDWTDNDYLSKGY-------FWNTIKSVNiSCAYDTASSGATGWAYS 319
Cdd:PLN03161 192 AD---------NWAtqGGRvkIDWTLAPFVARGRrfraracKWNGPVSIK-QCADPTPSNWWTSPSYS 249
GH16_XET cd02176
Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16; Xyloglucan ...
 112-283 7.89e-09

Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16; Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling.


Pssm-ID: 185685 [Multi-domain]  Cd Length: 263  Bit Score: 56.05  E-value: 7.89e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969 112 SSDNDGARLILTQNnTGSKI-SSTRYLhYGTID--FTLQTSKWAGVVTAAITMS---DVKDEIDWEWPGANTD---TVQT 182
Cdd:cd02176   22 SNDGTSVQLTLDQS-SGSGFkSKNKYL-FGFFSmrIKLPPGDSAGTVTAFYLSSqgpDNHDEIDFEFLGNVTGqpyTLQT 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 540392969 183 N--------------YWFlgianysategasssvssDTAAHFHTYTIDWQESYISWSIDGLLVRTVRKTDtisEDGTqyK 248
Cdd:cd02176  100 NvfangvggreqriyLWF------------------DPTADFHTYSILWNPHQIVFYVDDVPIRVFKNNE---ALGV--P 156

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 540392969 249 FPST-PSRVQISIWpagtDGNaqgtiDWA--GGY--IDWT 283
Cdd:cd02176  157 YPSSqPMGVYASIW----DGS-----DWAtqGGRvkIDWS 187
GH16_laminarinase_like cd08023
Laminarinase, member of the glycosyl hydrolase family 16; Laminarinase, also known as glucan ...
 167-243 5.48e-08

Laminarinase, member of the glycosyl hydrolase family 16; Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.


Pssm-ID: 185693 [Multi-domain]  Cd Length: 235  Bit Score: 53.01  E-value: 5.48e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 540392969 167 EID-WEWPGANTDTVQTNYWFLGIANYSATEGASSSVSSDTAA-HFHTYTIDWQESYISWSIDGLLVRTVRKTDTISED 243
Cdd:cd08023  115 EIDiMEYVGNEPNTVYGTLHGGATNDGNNGSGGSYTLPTDDLSdDFHTYAVEWTPDKITFYVDGKLYFTYTNPNTDNGG 193
ChtBD1 cd00035
Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a ...
 30-58 8.20e-06

Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins such as hevein, a major IgE-binding allergen in natural rubber latex, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.


Pssm-ID: 211311  Cd Length: 39  Bit Score: 42.37  E-value: 8.20e-06
                         10        20        30
                 ....*....|....*....|....*....|
gi 540392969  30 TFLCPSTApCCSEYGYCG-TDGYCLGGCEP 58
Cdd:cd00035    8 GPPCPNNL-CCSQYGYCGtGDDYCGEGCQS 36
ChtBD1_1 cd11618
Hevein or type 1 chitin binding domain; filamentous ascomycete subfamily; Hevein or type 1 ...
 38-58 4.63e-05

Hevein or type 1 chitin binding domain; filamentous ascomycete subfamily; Hevein or type 1 chitin binding domain (ChtBD1), a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins such as hevein, a major IgE-binding allergen in natural rubber latex, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.


Pssm-ID: 211316  Cd Length: 44  Bit Score: 40.44  E-value: 4.63e-05
                         10        20
                 ....*....|....*....|..
gi 540392969  38 PCCSEYGYCG-TDGYCLGGCEP 58
Cdd:cd11618   17 NCCSAYGWCGnTSDHCGVGCQP 38
Chitin_bind_1 pfam00187
Chitin recognition protein;
32-56 4.93e-05

Chitin recognition protein;


Pssm-ID: 459705  Cd Length: 38  Bit Score: 40.22  E-value: 4.93e-05
                          10        20
                  ....*....|....*....|....*.
gi 540392969   32 LCPSTApCCSEYGYCG-TDGYCLGGC 56
Cdd:pfam00187  10 TCPNNL-CCSQYGYCGtTSDYCGDGC 34
ChtBD1 smart00270
Chitin binding domain;
27-57 4.48e-04

Chitin binding domain;


Pssm-ID: 214593  Cd Length: 38  Bit Score: 37.35  E-value: 4.48e-04
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 540392969    27 CNATF---LCPSTApCCSEYGYCG-TDGYCLGGCE 57
Cdd:smart00270   2 CGSQAggkVCPNNL-CCSQFGYCGsGDEYCGRGCQ 35
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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