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Conserved domains on  [gi|365807618|gb|AEW95834|]
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geranylgeranyl reductase [Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488]

Protein Classification

geranylgeranyl reductase family protein( domain architecture ID 11493467)

geranylgeranyl reductase family protein may be involved in chlorophyll and bacteriochlorophyll biosynthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 13-335 8.64e-102

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


:

Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 304.63  E-value: 8.64e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVQMGIDVSEEagwlRNKGLRIIAGGMRLQ 92
Cdd:TIGR02032   2 DVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYKPCGGALSPRALEELDLPGELIVNL----VRGARFFSPNGDSVE 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   93 LDWPelasfPDYGLVRKRDDFDEQLARQAQKAGARL-YERCNVSAPLTDPRTGRITgveakLGEEKtpvTFHAPLVVAAD 171
Cdd:TIGR02032  78 IPIE-----TELAYVIDRDAFDEQLAERAQEAGAELrLGTRVLDVEIHDDRVVVIV-----RGSEG---TVTAKIVIGAD 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  172 GNSTRLSLAMGlHRREDRPMGVAVRTYFTSPrhDDDYLESWLELWDRRGGQEkllPGYGWVFGMGDGTSNVGLGVLnssP 251
Cdd:TIGR02032 145 GSRSIVAKKLG-LKKEPREYGVAARAEVEMP--DEEVDEDFVEVYIDRGIVP---GGYGWVFPKGDGTANVGVGSR---S 215

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  252 AFKELDWREVLKAWCASMPEewgyTPENMTCPIRGAALPMAFNRQPHYTRGLLLVGDAGGLVNPFNGEGIAYAMESGQIA 331
Cdd:TIGR02032 216 AEEGEDPKKYLKDFLARRPE----LKDAETVEVCGALIPIGRPDEKLVRGNVLLVGDAAGHVNPLTGEGIYYAMRSGDIA 291


                  ....
gi 365807618  332 ADVI 335
Cdd:TIGR02032 292 AEVV 295
 
Name Accession Description Interval E-value
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 13-335 8.64e-102

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 304.63  E-value: 8.64e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVQMGIDVSEEagwlRNKGLRIIAGGMRLQ 92
Cdd:TIGR02032   2 DVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYKPCGGALSPRALEELDLPGELIVNL----VRGARFFSPNGDSVE 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   93 LDWPelasfPDYGLVRKRDDFDEQLARQAQKAGARL-YERCNVSAPLTDPRTGRITgveakLGEEKtpvTFHAPLVVAAD 171
Cdd:TIGR02032  78 IPIE-----TELAYVIDRDAFDEQLAERAQEAGAELrLGTRVLDVEIHDDRVVVIV-----RGSEG---TVTAKIVIGAD 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  172 GNSTRLSLAMGlHRREDRPMGVAVRTYFTSPrhDDDYLESWLELWDRRGGQEkllPGYGWVFGMGDGTSNVGLGVLnssP 251
Cdd:TIGR02032 145 GSRSIVAKKLG-LKKEPREYGVAARAEVEMP--DEEVDEDFVEVYIDRGIVP---GGYGWVFPKGDGTANVGVGSR---S 215

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  252 AFKELDWREVLKAWCASMPEewgyTPENMTCPIRGAALPMAFNRQPHYTRGLLLVGDAGGLVNPFNGEGIAYAMESGQIA 331
Cdd:TIGR02032 216 AEEGEDPKKYLKDFLARRPE----LKDAETVEVCGALIPIGRPDEKLVRGNVLLVGDAAGHVNPLTGEGIYYAMRSGDIA 291


                  ....
gi 365807618  332 ADVI 335
Cdd:TIGR02032 292 AEVV 295
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
19-360 1.37e-66

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 214.06  E-value: 1.37e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  19 AGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVQMGIDvSEEAGWLRNKGLRIIAGgmrlqlDWPEL 98
Cdd:COG0644    1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKICGGGLLPRALEELEPLGLD-EPLERPVRGARFYSPGG------KSVEL 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  99 ASFPDYGLVRKRDDFDEQLARQAQKAGARLYERCNVSAPLTDPrtGRITgVEAKLGEEktpvtFHAPLVVAADGNSTRLS 178
Cdd:COG0644   74 PPGRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDD--GRVV-VRTGDGEE-----IRADYVVDADGARSLLA 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618 179 LAMGLHRREDRP--MGVAVRTYFTSPRHDDDYLESWLELWDrrggqEKLLPGYGWVFGMGDGTSNVGlgvlnsspafkel 256
Cdd:COG0644  146 RKLGLKRRSDEPqdYALAIKEHWELPPLEGVDPGAVEFFFG-----EGAPGGYGWVFPLGDGRVSVG------------- 207

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618 257 dwrevlkawcasmpeewgytpenmtcpirgaaLPMAFNRQPHYTRGLLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIV 336
Cdd:COG0644  208 --------------------------------IPLGGPRPRLVGDGVLLVGDAAGFVDPLTGEGIHLAMKSGRLAAEAIA 255

                        330       340
                 ....*....|....*....|....
gi 365807618 337 QAHSRatEAGRELALQRYPRVLKD 360
Cdd:COG0644  256 EALEG--GDFSAEALAEYERRLRE 277
PLN00093 PLN00093
geranylgeranyl diphosphate reductase; Provisional
 4-379 4.81e-18

geranylgeranyl diphosphate reductase; Provisional


Pssm-ID: 177713 [Multi-domain]  Cd Length: 450  Bit Score: 85.96  E-value: 4.81e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   4 TTAASERSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTaFPREKVCGdGLTPratkqLVQMG-IDVSEEAGWLRNKGL 82
Cdd:PLN00093  32 SKKLSGRKLRVAVIGGGPAGACAAETLAKGGIETFLIERK-LDNAKPCG-GAIP-----LCMVGeFDLPLDIIDRKVTKM 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  83 RIIAGGmRLQLDWPELASFPDY-GLVRkRDDFDEQLARQAQKAGAR----LYERCNVSAPLTDPRTGRITGVEAKLGEeK 157
Cdd:PLN00093 105 KMISPS-NVAVDIGKTLKPHEYiGMVR-REVLDSFLRERAQSNGATlingLFTRIDVPKDPNGPYVIHYTSYDSGSGA-G 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618 158 TPVTFHAPLVVAADGNSTRLSLAMGLHrreDRPMGVAVRTYFTSPrhdDDYLESWLELWDRRGGQEKLLPGYGWVFGMGD 237
Cdd:PLN00093 182 TPKTLEVDAVIGADGANSRVAKDIDAG---DYDYAIAFQERIKIP---DDKMEYYEDLAEMYVGDDVSPDFYGWVFPKCD 255

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618 238 GTSnVGLGVLNSSPAFKELD--WREVLKAWCASmpeewGYTpenmtcpIRGAALPMAFNRQPHYTRG-LLLVGDAGGLVN 314
Cdd:PLN00093 256 HVA-VGTGTVVNKPAIKKYQraTRNRAKDKIAG-----GKI-------IRVEAHPIPEHPRPRRVRGrVALVGDAAGYVT 322

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 365807618 315 PFNGEGIAYAMESGQIAADVIVQAHSRATEAGRELALQRYPRVLKDTYGGYYT----LGRAFVQliSNP 379
Cdd:PLN00093 323 KCSGEGIYFAAKSGRMCAEAIVEGSENGTRMVDEADLREYLRKWDKKYWPTYKvldiLQKVFYR--SNP 389
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 12-325 1.07e-12

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 68.89  E-value: 1.07e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   12 ADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTA----FPRekvcGDGLTPRATKQLVQMGIDVSEEAGWLRNKGLRIIAG 87
Cdd:pfam01494   2 TDVLIVGGGPAGLMLALLLARAGVRVVLVERHAttsvLPR----AHGLNQRTMELLRQAGLEDRILAEGVPHEGMGLAFY 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   88 GMRLQLDWPELASFPDYGLVrKRDDFDEQLARQAQKAGARLYERCNVSAPLTDPrtgriTGVEAKL--GEEKTPVTFHAP 165
Cdd:pfam01494  78 NTRRRADLDFLTSPPRVTVY-PQTELEPILVEHAEARGAQVRFGTEVLSLEQDG-----DGVTAVVrdRRDGEEYTVRAK 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  166 LVVAADG-NST-RLSLAMGLHRREDRPMGVaVRTYFTSPRHDDDYLESWLELW----DRRGG-----QEKLLPGYGWVFG 234
Cdd:pfam01494 152 YLVGCDGgRSPvRKTLGIEFEGFEGVPFGS-LDVLFDAPDLSDPVERAFVHYLiyapHSRGFmvgpwRSAGRERYYVQVP 230

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  235 MGDgtsnvglGVLNSSPAFkelDWREVLKAWcasmPEEWGyTPENMTCPIRGAALPMAFNRQPHYTRG-LLLVGDAGGLV 313
Cdd:pfam01494 231 WDE-------EVEERPEEF---TDEELKQRL----RSIVG-IDLALVEILWKSIWGVASRVATRYRKGrVFLAGDAAHIH 295

                         330
                  ....*....|..
gi 365807618  314 NPFNGEGIAYAM 325
Cdd:pfam01494 296 PPTGGQGLNTAI 307
 
Name Accession Description Interval E-value
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 13-335 8.64e-102

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 304.63  E-value: 8.64e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVQMGIDVSEEagwlRNKGLRIIAGGMRLQ 92
Cdd:TIGR02032   2 DVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYKPCGGALSPRALEELDLPGELIVNL----VRGARFFSPNGDSVE 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   93 LDWPelasfPDYGLVRKRDDFDEQLARQAQKAGARL-YERCNVSAPLTDPRTGRITgveakLGEEKtpvTFHAPLVVAAD 171
Cdd:TIGR02032  78 IPIE-----TELAYVIDRDAFDEQLAERAQEAGAELrLGTRVLDVEIHDDRVVVIV-----RGSEG---TVTAKIVIGAD 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  172 GNSTRLSLAMGlHRREDRPMGVAVRTYFTSPrhDDDYLESWLELWDRRGGQEkllPGYGWVFGMGDGTSNVGLGVLnssP 251
Cdd:TIGR02032 145 GSRSIVAKKLG-LKKEPREYGVAARAEVEMP--DEEVDEDFVEVYIDRGIVP---GGYGWVFPKGDGTANVGVGSR---S 215

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  252 AFKELDWREVLKAWCASMPEewgyTPENMTCPIRGAALPMAFNRQPHYTRGLLLVGDAGGLVNPFNGEGIAYAMESGQIA 331
Cdd:TIGR02032 216 AEEGEDPKKYLKDFLARRPE----LKDAETVEVCGALIPIGRPDEKLVRGNVLLVGDAAGHVNPLTGEGIYYAMRSGDIA 291


                  ....
gi 365807618  332 ADVI 335
Cdd:TIGR02032 292 AEVV 295
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
19-360 1.37e-66

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 214.06  E-value: 1.37e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  19 AGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVQMGIDvSEEAGWLRNKGLRIIAGgmrlqlDWPEL 98
Cdd:COG0644    1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKICGGGLLPRALEELEPLGLD-EPLERPVRGARFYSPGG------KSVEL 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  99 ASFPDYGLVRKRDDFDEQLARQAQKAGARLYERCNVSAPLTDPrtGRITgVEAKLGEEktpvtFHAPLVVAADGNSTRLS 178
Cdd:COG0644   74 PPGRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDD--GRVV-VRTGDGEE-----IRADYVVDADGARSLLA 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618 179 LAMGLHRREDRP--MGVAVRTYFTSPRHDDDYLESWLELWDrrggqEKLLPGYGWVFGMGDGTSNVGlgvlnsspafkel 256
Cdd:COG0644  146 RKLGLKRRSDEPqdYALAIKEHWELPPLEGVDPGAVEFFFG-----EGAPGGYGWVFPLGDGRVSVG------------- 207

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618 257 dwrevlkawcasmpeewgytpenmtcpirgaaLPMAFNRQPHYTRGLLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIV 336
Cdd:COG0644  208 --------------------------------IPLGGPRPRLVGDGVLLVGDAAGFVDPLTGEGIHLAMKSGRLAAEAIA 255

                        330       340
                 ....*....|....*....|....
gi 365807618 337 QAHSRatEAGRELALQRYPRVLKD 360
Cdd:COG0644  256 EALEG--GDFSAEALAEYERRLRE 277
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 10-354 6.68e-21

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 92.69  E-value: 6.68e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  10 RSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVQMGI--DVSEEAGWLRnkGLRII-- 85
Cdd:COG0654    2 MRTDVLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGRGIALSPRSLELLRRLGLwdRLLARGAPIR--GIRVRdg 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  86 -AGGMRLQLDWPELASFPDYGLvrKRDDFDEQLARQAQKAGARLYERCNVSAPLTDPrtgriTGVEAKLGEEKtpvTFHA 164
Cdd:COG0654   80 sDGRVLARFDAAETGLPAGLVV--PRADLERALLEAARALGVELRFGTEVTGLEQDA-----DGVTVTLADGR---TLRA 149

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618 165 PLVVAADG-NSTrlslamglhrredrpmgvaVRTYFTSPRHDDDYLESWLelwdrrggqekllpgygwVFGMgdgtsnvg 243
Cdd:COG0654  150 DLVVGADGaRSA-------------------VRRLLGIGFTGRDYPQRAL------------------WAGV-------- 184

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618 244 lgvlnsspafkELDWREVLKAWCASMPEewgytpenMTCPIRGAALPMAFNRQPHYTRG-LLLVGDAGGLVNPFNGEGIA 322
Cdd:COG0654  185 -----------RTELRARLAAAGPRLGE--------LLELSPRSAFPLRRRRAERWRRGrVVLLGDAAHTMHPLGGQGAN 245

                        330       340       350
                 ....*....|....*....|....*....|..
gi 365807618 323 YAMESGQIAADVIVQAHSRATEAGrelALQRY 354
Cdd:COG0654  246 LALRDAAALAWKLAAALRGRDDEA---ALARY 274
PLN00093 PLN00093
geranylgeranyl diphosphate reductase; Provisional
 4-379 4.81e-18

geranylgeranyl diphosphate reductase; Provisional


Pssm-ID: 177713 [Multi-domain]  Cd Length: 450  Bit Score: 85.96  E-value: 4.81e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   4 TTAASERSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTaFPREKVCGdGLTPratkqLVQMG-IDVSEEAGWLRNKGL 82
Cdd:PLN00093  32 SKKLSGRKLRVAVIGGGPAGACAAETLAKGGIETFLIERK-LDNAKPCG-GAIP-----LCMVGeFDLPLDIIDRKVTKM 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  83 RIIAGGmRLQLDWPELASFPDY-GLVRkRDDFDEQLARQAQKAGAR----LYERCNVSAPLTDPRTGRITGVEAKLGEeK 157
Cdd:PLN00093 105 KMISPS-NVAVDIGKTLKPHEYiGMVR-REVLDSFLRERAQSNGATlingLFTRIDVPKDPNGPYVIHYTSYDSGSGA-G 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618 158 TPVTFHAPLVVAADGNSTRLSLAMGLHrreDRPMGVAVRTYFTSPrhdDDYLESWLELWDRRGGQEKLLPGYGWVFGMGD 237
Cdd:PLN00093 182 TPKTLEVDAVIGADGANSRVAKDIDAG---DYDYAIAFQERIKIP---DDKMEYYEDLAEMYVGDDVSPDFYGWVFPKCD 255

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618 238 GTSnVGLGVLNSSPAFKELD--WREVLKAWCASmpeewGYTpenmtcpIRGAALPMAFNRQPHYTRG-LLLVGDAGGLVN 314
Cdd:PLN00093 256 HVA-VGTGTVVNKPAIKKYQraTRNRAKDKIAG-----GKI-------IRVEAHPIPEHPRPRRVRGrVALVGDAAGYVT 322

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 365807618 315 PFNGEGIAYAMESGQIAADVIVQAHSRATEAGRELALQRYPRVLKDTYGGYYT----LGRAFVQliSNP 379
Cdd:PLN00093 323 KCSGEGIYFAAKSGRMCAEAIVEGSENGTRMVDEADLREYLRKWDKKYWPTYKvldiLQKVFYR--SNP 389
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
10-336 1.90e-13

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 71.09  E-value: 1.90e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  10 RSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREK------VCGDGLTPRATKQLVQM---------------GI 68
Cdd:COG0665    1 ATADVVVIGGGIAGLSTAYHLARRGLDVTVLERGRPGSGAsgrnagQLRPGLAALADRALVRLarealdlwrelaaelGI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  69 DVS-EEAGWLR----NKGLRIIAGGMRLQ---------LD-------WPELASFPDYGLVRKRDDFD-------EQLARQ 120
Cdd:COG0665   81 DCDfRRTGVLYlartEAELAALRAEAEALralglpvelLDaaelrerEPGLGSPDYAGGLYDPDDGHvdpaklvRALARA 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618 121 AQKAGARLYERCNVSAplTDPRTGRITGVEAKLGeektpvTFHAP-LVVAADGNSTRLSLAMGLhrredRPMGVAVRTYF 199
Cdd:COG0665  161 ARAAGVRIREGTPVTG--LEREGGRVTGVRTERG------TVRADaVVLAAGAWSARLLPMLGL-----RLPLRPVRGYV 227

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618 200 TSPRHDDDYLESWLeLWD-----RRGGQEKLLPGYGWVFGMGDGTSNVGLGVLNSSPA---FKELDWREVLKAWCASMPe 271
Cdd:COG0665  228 LVTEPLPDLPLRPV-LDDtgvylRPTADGRLLVGGTAEPAGFDRAPTPERLEALLRRLrrlFPALADAEIVRAWAGLRP- 305

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 365807618 272 ewgYTPENMtcPIRGAAlpmafnrqPHYtRGLLLvgdAGGlvnpFNGEGIAYAMESGQIAADVIV 336
Cdd:COG0665  306 ---MTPDGL--PIIGRL--------PGA-PGLYV---ATG----HGGHGVTLAPAAGRLLADLIL 349
PRK06185 PRK06185
FAD-dependent oxidoreductase;
6-207 4.20e-13

FAD-dependent oxidoreductase;


Pssm-ID: 235729 [Multi-domain]  Cd Length: 407  Bit Score: 70.27  E-value: 4.20e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   6 AASERSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTA-FPREkVCGDGLTPRATKQLVQMG-IDVSEEAGWLRNKGLR 83
Cdd:PRK06185   1 MAEVETTDCCIVGGGPAGMMLGLLLARAGVDVTVLEKHAdFLRD-FRGDTVHPSTLELMDELGlLERFLELPHQKVRTLR 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  84 IIAGGMRLQL-DWPELASFPDYGLVRKRDDFDEQLARQAQK-AGARLYERCNVSAPLTDPrtGRITGVEAKLGEEktPVT 161
Cdd:PRK06185  80 FEIGGRTVTLaDFSRLPTPYPYIAMMPQWDFLDFLAEEASAyPNFTLRMGAEVTGLIEEG--GRVTGVRARTPDG--PGE 155

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 365807618 162 FHAPLVVAADGNSTRLSLAMGLH-RREDRPMGVavrTYFTSPRHDDD 207
Cdd:PRK06185 156 IRADLVVGADGRHSRVRALAGLEvREFGAPMDV---LWFRLPREPDD 199
PRK10015 PRK10015
oxidoreductase; Provisional
 8-362 8.65e-13

oxidoreductase; Provisional


Pssm-ID: 182194 [Multi-domain]  Cd Length: 429  Bit Score: 69.62  E-value: 8.65e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   8 SERSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVQMGIDVSE--EAGWLRNKgLRII 85
Cdd:PRK10015   2 SDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAASApvERKVTREK-ISFL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  86 AGGMRLQLDW----PELASFPDYGLVRKRddFDEQLARQAQKAGARLYERCNVSAPLtdpRTG-RITGVEAklGEEktpv 160
Cdd:PRK10015  81 TEESAVTLDFhreqPDVPQHASYTVLRNR--LDPWLMEQAEQAGAQFIPGVRVDALV---REGnKVTGVQA--GDD---- 149

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618 161 TFHAPLVVAADGNSTRLSLAMGLHRRED---RPMGVAVRTYFTSPRHDDDYLESWLE--LWDRRGGQEKLLPGYGWVF-- 233
Cdd:PRK10015 150 ILEANVVILADGVNSMLGRSLGMVPASDphhYAVGVKEVIGLTPEQINDRFNITGEEgaAWLFAGSPSDGLMGGGFLYtn 229

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618 234 ----------GMGD---GTSNVG--LGVLNSSPAFKELDWREVLKAWCASMPEEWGYtpenmtcpirgAALPMAFNrqph 298
Cdd:PRK10015 230 kdsislglvcGLGDiahAQKSVPqmLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGL-----------AMVPQLVN---- 294

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 365807618 299 ytRGLLLVGDAGGL-VN-PFNGEGIAYAMESGQIAADVIVQAHSRATEAGRELAlqRYPRVLKDTY 362
Cdd:PRK10015 295 --DGVMIVGDAAGFcLNlGFTVRGMDLAIASAQAAATTVIAAKERADFSASSLA--QYKRELEQSC 356
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 12-325 1.07e-12

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 68.89  E-value: 1.07e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   12 ADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTA----FPRekvcGDGLTPRATKQLVQMGIDVSEEAGWLRNKGLRIIAG 87
Cdd:pfam01494   2 TDVLIVGGGPAGLMLALLLARAGVRVVLVERHAttsvLPR----AHGLNQRTMELLRQAGLEDRILAEGVPHEGMGLAFY 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   88 GMRLQLDWPELASFPDYGLVrKRDDFDEQLARQAQKAGARLYERCNVSAPLTDPrtgriTGVEAKL--GEEKTPVTFHAP 165
Cdd:pfam01494  78 NTRRRADLDFLTSPPRVTVY-PQTELEPILVEHAEARGAQVRFGTEVLSLEQDG-----DGVTAVVrdRRDGEEYTVRAK 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  166 LVVAADG-NST-RLSLAMGLHRREDRPMGVaVRTYFTSPRHDDDYLESWLELW----DRRGG-----QEKLLPGYGWVFG 234
Cdd:pfam01494 152 YLVGCDGgRSPvRKTLGIEFEGFEGVPFGS-LDVLFDAPDLSDPVERAFVHYLiyapHSRGFmvgpwRSAGRERYYVQVP 230

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  235 MGDgtsnvglGVLNSSPAFkelDWREVLKAWcasmPEEWGyTPENMTCPIRGAALPMAFNRQPHYTRG-LLLVGDAGGLV 313
Cdd:pfam01494 231 WDE-------EVEERPEEF---TDEELKQRL----RSIVG-IDLALVEILWKSIWGVASRVATRYRKGrVFLAGDAAHIH 295

                         330
                  ....*....|..
gi 365807618  314 NPFNGEGIAYAM 325
Cdd:pfam01494 296 PPTGGQGLNTAI 307
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 13-221 1.34e-09

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 59.33  E-value: 1.34e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPRE-------KVCGDGLTPRATKQLVQM---------------GIDV 70
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGSgasgrnaGLIHPGLRYLEPSELARLalealdlweeleeelGIDC 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   71 -------------SEEAGWLRNKGLRIIAGGMRLQLD-------WPELASF------PDYGLVRkRDDFDEQLARQAQKA 124
Cdd:pfam01266  81 gfrrcgvlvlardEEEEALEKLLAALRRLGVPAELLDaeelrelEPLLPGLrgglfyPDGGHVD-PARLLRALARAAEAL 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  125 GARLYERCNVSAPLtdpRTGRITGVEaklgeekTPVTFHApLVVAADGNSTRLSLAmglhrrEDRPMGVAVRTY--FTSP 202
Cdd:pfam01266 160 GVRIIEGTEVTGIE---EEGGVWGVV-------TTGEADA-VVNAAGAWADLLALP------GLRLPVRPVRGQvlVLEP 222

                         250
                  ....*....|....*....
gi 365807618  203 RHDDDYLESWLELWDRRGG 221
Cdd:pfam01266 223 LPEALLILPVPITVDPGRG 241
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
 9-172 6.50e-09

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 57.54  E-value: 6.50e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   9 ERSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPR-----------------EKVCGD------------GLTPRA 59
Cdd:COG1053    1 DHEYDVVVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRGghtaaaqgginaagtnvQKAAGEdspeehfydtvkGGDGLA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  60 TKQLVQMGIDVSEEA-GWLRNKGLRIIAggmrlqLDWPELASFPDYGLVRKRDDFD-------EQLARQAQKAGARLYER 131
Cdd:COG1053   81 DQDLVEALAEEAPEAiDWLEAQGVPFSR------TPDGRLPQFGGHSVGRTCYAGDgtghallATLYQAALRLGVEIFTE 154

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 365807618 132 CNVSAPLTDprTGRITGVEAKlGEEKTPVTFHAPLVVAADG 172
Cdd:COG1053  155 TEVLDLIVD--DGRVVGVVAR-DRTGEIVRIRAKAVVLATG 192
PRK10157 PRK10157
putative oxidoreductase FixC; Provisional
 8-350 1.00e-08

putative oxidoreductase FixC; Provisional


Pssm-ID: 182273 [Multi-domain]  Cd Length: 428  Bit Score: 56.84  E-value: 1.00e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   8 SERSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREK-VCGDGLTPRATKQLV-----QMGID---VSEEAGWLR 78
Cdd:PRK10157   2 SEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKnVTGGRLYAHSLEHIIpgfadSAPVErliTHEKLAFMT 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  79 NKGlriiAGGMRLQLDWPELASFPDYGLVRKRddFDEQLARQAQKAGARLYERCNVSAPLTdpRTGRITGVEAKlGEekt 158
Cdd:PRK10157  82 EKS----AMTMDYCNGDETSPSQRSYSVLRSK--FDAWLMEQAEEAGAQLITGIRVDNLVQ--RDGKVVGVEAD-GD--- 149

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618 159 pvTFHAPLVVAADGNSTRLSLAMGLHRR-EDRPMGVAVRTYFTSPrhdddylESWLElwDRRGGQEKllPGYGWVFG--- 234
Cdd:PRK10157 150 --VIEAKTVILADGVNSILAEKLGMAKRvKPTDVAVGVKELIELP-------KSVIE--DRFQLQGN--QGAACLFAgsp 216

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618 235 ----MGDG-----TSNVGLGVLNSSPAFKEldwrevLKAWCASMPEEWGYTPenMTCP-IRGAAL--------PMA-FNR 295
Cdd:PRK10157 217 tdglMGGGflytnENTLSLGLVCGLHHLHD------AKKSVPQMLEDFKQHP--AVAPlIAGGKLveysahvvPEAgINM 288

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 365807618 296 QPHYTR-GLLLVGDAGGLVNP--FNGEGIAYAMESGQIAADVIVQAHSRATEAGRELA 350
Cdd:PRK10157 289 LPELVGdGVLIAGDAAGMCMNlgFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLA 346
TIGR00292 TIGR00292
thiazole biosynthesis enzyme; This enzyme is involved in the biosynthesis of the thiamine ...
 12-149 1.79e-08

thiazole biosynthesis enzyme; This enzyme is involved in the biosynthesis of the thiamine precursor thiazole, and is repressed by thiamine. This family includes c-thi1, a Citrus gene induced during natural and ethylene induced fruit maturation and is highly homologous to plant and yeast thi genes involved in thiamine biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine]


Pssm-ID: 273001  Cd Length: 254  Bit Score: 55.23  E-value: 1.79e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   12 ADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRAtkqlvqmgIDVSEEAG-WLRNKGLRIIAGGmr 90
Cdd:TIGR00292  22 SDVIIVGAGPSGLTAAYYLAKNGLKVCVLERSLAFGGGSWGGGMLFSK--------IVVEKPAHeILDEFGIRYEDEG-- 91

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 365807618   91 lqldwpelasfpDYGLVRKRDDFDEQLARQAQKAGARLYERCNVSAPLTDPRTGRITGV 149
Cdd:TIGR00292  92 ------------DGYVVADSAEFISTLASKALQAGAKIFNGTSVEDLITRDDTVGVAGV 138
PLN02985 PLN02985
squalene monooxygenase
 5-172 4.49e-08

squalene monooxygenase


Pssm-ID: 178566 [Multi-domain]  Cd Length: 514  Bit Score: 55.29  E-value: 4.49e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   5 TAASERS---ADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVQMGI-DVSEEAGWLRNK 80
Cdd:PLN02985  34 AVAEERKdgaTDVIIVGAGVGGSALAYALAKDGRRVHVIERDLREPERMMGEFMQPGGRFMLSKLGLeDCLEGIDAQKAT 113

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  81 GLRIIAGGMRLQLDWP-ELASFPDYGLVR--KRDDFDEQLARQAQKAGARLYERCNVSAPLTDprTGRITGVEAK--LGE 155
Cdd:PLN02985 114 GMAVYKDGKEAVAPFPvDNNNFPYEPSARsfHNGRFVQRLRQKASSLPNVRLEEGTVKSLIEE--KGVIKGVTYKnsAGE 191

                        170
                 ....*....|....*..
gi 365807618 156 EKTPVtfhAPLVVAADG 172
Cdd:PLN02985 192 ETTAL---APLTVVCDG 205
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 13-172 6.78e-08

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 54.22  E-value: 6.78e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKT--------------AFPREKVCGDGLTP-------------RATKQLVQ 65
Cdd:pfam00890   1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEKGqpfggatawssggiDALGNPPQGGIDSPelhptdtlkgldeLADHPYVE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   66 MGIDVSEEA-GWLRNKGLRiIAGGMRLQLDWPELASF------PDYGLVRKRDDFD-----EQLARQAQKAGARLYERCN 133
Cdd:pfam00890  81 AFVEAAPEAvDWLEALGVP-FSRTEDGHLDLRPLGGLsatwrtPHDAADRRRGLGTghallARLLEGLRKAGVDFQPRTA 159

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 365807618  134 VSAPLTDPrtGRITGVEAKLGEEKTPVTFHAP--LVVAADG 172
Cdd:pfam00890 160 ADDLIVED--GRVTGAVVENRRNGREVRIRAIaaVLLATGG 198
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
13-42 7.39e-08

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 53.59  E-value: 7.39e-08
                         10        20        30
                 ....*....|....*....|....*....|
gi 365807618  13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 42
Cdd:COG0492    2 DVVIIGAGPAGLTAAIYAARAGLKTLVIEG 31
COG2509 COG2509
FAD-dependent dehydrogenase [General function prediction only];
13-42 1.02e-07

FAD-dependent dehydrogenase [General function prediction only];


Pssm-ID: 441999 [Multi-domain]  Cd Length: 466  Bit Score: 53.96  E-value: 1.02e-07
                         10        20        30
                 ....*....|....*....|....*....|
gi 365807618  13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 42
Cdd:COG2509   32 DVVIVGAGPAGLFAALELAEAGLKPLVLER 61
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 10-42 1.21e-07

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 53.70  E-value: 1.21e-07
                         10        20        30
                 ....*....|....*....|....*....|...
gi 365807618  10 RSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 42
Cdd:COG1233    2 MMYDVVVIGAGIGGLAAAALLARAGYRVTVLEK 34
Lycopene_cycl pfam05834
Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. ...
 13-375 1.34e-07

Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclization of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare.


Pssm-ID: 310433 [Multi-domain]  Cd Length: 380  Bit Score: 53.19  E-value: 1.34e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   13 DVIVVGAGPAGSTTAYYL--AKAGLDVLLLEKTA---FPREKV-CGDGLTPRATKQLVqmgidvseEAGWlrnKGLRI-I 85
Cdd:pfam05834   1 DVVIIGAGPAGLSLAARLaaAKPGLSVVLIEPGPsllRPNNYVwSDEFEDLGALEDCV--------GHSW---PGTRVhF 69

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   86 AGGMRLQLDWPelasfpdYGLVRkRDDFDEQLARQAQKAGARLYErcnvsapltdprtGRITGVEAKLGEEKTPV----- 160
Cdd:pfam05834  70 DDGKPILIGRA-------YGRVS-SKRLEEEMLQRCVENGVIRLN-------------AKVESVEADPVGESLVVceggr 128

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  161 TFHAPLVVAADGN-STRLSLAMGLHrredRPMGVAVRTyfTSPRHDDDYleswLELWDRRGGQEKLLPGYGWVFGMGDGT 239
Cdd:pfam05834 129 TIRARLVFDARGLgSLPPGRTLGYQ----TFYGVEVEV--DNPPFDPDV----MVLMDARVPQPLKGPTFLYALPLDPDR 198

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  240 SNVGLGVLNSSPAFKELDWREVLKAWCASM--------PEEWGYTPENMTCPIRG-AALPMAFnrqphytrglllvGDAG 310
Cdd:pfam05834 199 LLVEETYLSSGPVLPFDALKKRLAAYLRALgirilevvEEEQGVIPMTLGGDLPNtPQKVLRI-------------GAAA 265

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 365807618  311 GLVNPFNGEGIAYAMESGQIAADVIVQA---HSRATEAGRELalqrYPRVLKDTYGGYYTLGRA-FVQL 375
Cdd:pfam05834 266 GMVHPATGYSVARSLRLAPKLASAIAAAlrlSSPSARAWRDL----WPRERWRQRGFFRLLGRMlFLAL 330
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
16-58 2.87e-07

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 47.53  E-value: 2.87e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 365807618   16 VVGAGPAGSTTAYYLAKAGLDVLLLEKtafpREKVCGDGLTPR 58
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEK----RDRLGGNAYSYR 39
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 13-44 3.39e-07

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 52.14  E-value: 3.39e-07
                         10        20        30
                 ....*....|....*....|....*....|..
gi 365807618  13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTA 44
Cdd:COG1232    3 RVAVIGGGIAGLTAAYRLAKAGHEVTVLEASD 34
solA PRK11259
N-methyl-L-tryptophan oxidase;
13-42 9.17e-07

N-methyl-L-tryptophan oxidase;


Pssm-ID: 236887 [Multi-domain]  Cd Length: 376  Bit Score: 50.60  E-value: 9.17e-07
                         10        20        30
                 ....*....|....*....|....*....|
gi 365807618  13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 42
Cdd:PRK11259   5 DVIVIGLGSMGSAAGYYLARRGLRVLGLDR 34
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
10-41 1.10e-06

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 50.69  E-value: 1.10e-06
                         10        20        30
                 ....*....|....*....|....*....|..
gi 365807618  10 RSADVIVVGAGPAGSTTAYYLAKAGLDVLLLE 41
Cdd:COG1231    6 RGKDVVIVGAGLAGLAAARELRKAGLDVTVLE 37
soxA_mon TIGR01377
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ...
 13-60 1.77e-06

sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]


Pssm-ID: 130444 [Multi-domain]  Cd Length: 380  Bit Score: 49.83  E-value: 1.77e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 365807618   13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFP--REKVCGDGLTPRAT 60
Cdd:TIGR01377   2 DVIVVGAGIMGCFAAYHLAKHGKKTLLLEQFDLPhsRGSSHGQSRIIRKA 51
PTZ00367 PTZ00367
squalene epoxidase; Provisional
 13-340 2.82e-06

squalene epoxidase; Provisional


Pssm-ID: 240384 [Multi-domain]  Cd Length: 567  Bit Score: 49.46  E-value: 2.82e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPR-EKVCGDGLTPRATKQLVQMGIDVSEEAGWLRNKGLRIIAG-GMR 90
Cdd:PTZ00367  35 DVIIVGGSIAGPVLAKALSKQGRKVLMLERDLFSKpDRIVGELLQPGGVNALKELGMEECAEGIGMPCFGYVVFDHkGKQ 114

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  91 LQLDWPELA---SFpDYGlvrkrdDFDEQLAR---QAQKAGARLYERCNVSAPLTDPRTG-RITGVEAKLGEEK----TP 159
Cdd:PTZ00367 115 VKLPYGAGAsgvSF-HFG------DFVQNLRShvfHNCQDNVTMLEGTVNSLLEEGPGFSeRAYGVEYTEAEKYdvpeNP 187

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618 160 ----------------VTFHAPLVVAADGNSTRLSlamglhRRedrpmgvaVRTYFTSPRHDDDYLEswLELWDRRGGQE 223
Cdd:PTZ00367 188 fredppsanpsattvrKVATAPLVVMCDGGMSKFK------SR--------YQHYTPASENHSHFVG--LVLKNVRLPKE 251

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618 224 KllpgYGWVFGMGDG--------TSNVGLGVLNSSPAFKELdwrEVLKAWCAS--MPEewgyTPENM----------TCP 283
Cdd:PTZ00367 252 Q----HGTVFLGKTGpilsyrldDNELRVLVDYNKPTLPSL---EEQSEWLIEdvAPH----LPENMresfiraskdTKR 320

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 365807618 284 IRgaALPMAFnRQPHYT--RGLLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHS 340
Cdd:PTZ00367 321 IR--SMPNAR-YPPAFPsiKGYVGIGDHANQRHPLTGGGMTCCFSDCIRLAKSLTGIKS 376
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 13-42 3.46e-06

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 49.09  E-value: 3.46e-06
                         10        20        30
                 ....*....|....*....|....*....|
gi 365807618  13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 42
Cdd:COG2072    8 DVVVIGAGQAGLAAAYHLRRAGIDFVVLEK 37
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
 13-150 5.63e-06

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 48.54  E-value: 5.63e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKtafprEKVCGD----GLTPraTKQLVQmGIDVSEEAGWLRNKGLRIIAgg 88
Cdd:COG1249    5 DLVVIGAGPGGYVAAIRAAQLGLKVALVEK-----GRLGGTclnvGCIP--SKALLH-AAEVAHEARHAAEFGISAGA-- 74

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 365807618  89 mrLQLDWPELASfpdyglvRKR---DDFDEQLARQAQKAGARLYErcnVSAPLTDPRTGRITGVE 150
Cdd:COG1249   75 --PSVDWAALMA-------RKDkvvDRLRGGVEELLKKNGVDVIR---GRARFVDPHTVEVTGGE 127
PRK07208 PRK07208
hypothetical protein; Provisional
 13-44 7.04e-06

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 47.96  E-value: 7.04e-06
                         10        20        30
                 ....*....|....*....|....*....|..
gi 365807618  13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTA 44
Cdd:PRK07208   6 SVVIIGAGPAGLTAAYELLKRGYPVTVLEADP 37
mhpA PRK06183
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
1-213 9.67e-06

bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;


Pssm-ID: 235727 [Multi-domain]  Cd Length: 500  Bit Score: 47.59  E-value: 9.67e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   1 MSeTTAASERSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEK--TAFPRekvcgdgltPRATkqlvqmGIDvsEEAgwLR 78
Cdd:PRK06183   1 MA-AQHPDAHDTDVVIVGAGPVGLTLANLLGQYGVRVLVLERwpTLYDL---------PRAV------GID--DEA--LR 60

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  79 -----------------NKGLRIIAGGMRLQLDWpELASFPDYGLvRKRDDFDEQL------ARQAQKAGARLYERCNVS 135
Cdd:PRK06183  61 vlqaigladevlphttpNHGMRFLDAKGRCLAEI-ARPSTGEFGW-PRRNAFHQPLleavlrAGLARFPHVRVRFGHEVT 138

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 365807618 136 ApLTDPRTGRITGVEAKLGEektPVTFHAPLVVAADG-NSTrlslamglhrredrpmgvaVRTYFTSPRHDDDYLESWL 213
Cdd:PRK06183 139 A-LTQDDDGVTVTLTDADGQ---RETVRARYVVGCDGaNSF-------------------VRRTLGVPFEDLTFPERWL 194
PRK12842 PRK12842
putative succinate dehydrogenase; Reviewed
 3-45 1.22e-05

putative succinate dehydrogenase; Reviewed


Pssm-ID: 237224 [Multi-domain]  Cd Length: 574  Bit Score: 47.38  E-value: 1.22e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 365807618   3 ETTAASERSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAF 45
Cdd:PRK12842   1 EECMTNELTCDVLVIGSGAGGLSAAITARKLGLDVVVLEKEPV 43
Trp_halogenase pfam04820
Tryptophan halogenase; Tryptophan halogenase catalyzes the chlorination of tryptophan to form ...
 13-78 2.13e-05

Tryptophan halogenase; Tryptophan halogenase catalyzes the chlorination of tryptophan to form 7-chlorotryptophan. This is the first step in the biosynthesis of pyrrolnitrin, an antibiotic with broad-spectrum anti-fungal activity. Tryptophan halogenase is NADH-dependent.


Pssm-ID: 398475 [Multi-domain]  Cd Length: 457  Bit Score: 46.55  E-value: 2.13e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   13 DVIVVGAGPAGSTTAYYLAKA---GLDVLLLEKTAFPREKVcGDGLTPrATKQLVQM-GIDvseEAGWLR 78
Cdd:pfam04820   1 KIVIVGGGTAGWMAAAALARAlkgGLDVTLVESEEIGTVGV-GEATIP-SIRTFNRMlGID---EAEFLR 65
Thi4 pfam01946
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.
 12-46 2.18e-05

Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.


Pssm-ID: 460393  Cd Length: 232  Bit Score: 45.54  E-value: 2.18e-05
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 365807618   12 ADVIVVGAGPAGSTTAYYLAKA-GLDVLLLEKTAFP 46
Cdd:pfam01946  18 SDVVIVGAGSSGLTAAYYLAKNrGLKVAIIERSVSP 53
GIDA pfam01134
Glucose inhibited division protein A;
13-40 2.41e-05

Glucose inhibited division protein A;


Pssm-ID: 250388 [Multi-domain]  Cd Length: 391  Bit Score: 46.39  E-value: 2.41e-05
                          10        20
                  ....*....|....*....|....*...
gi 365807618   13 DVIVVGAGPAGSTTAYYLAKAGLDVLLL 40
Cdd:pfam01134   1 DVIVIGGGHAGCEAALAAARMGAKVLLI 28
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 13-114 2.50e-05

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 45.77  E-value: 2.50e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEktafpREKVC-GDGLTPraTKQLVQMGIDVSEEAGWL-----RNKGLRIIA 86
Cdd:pfam07992   2 DVVVIGGGPAGLAAALTLAQLGGKVTLIE-----DEGTCpYGGCVL--SKALLGAAEAPEIASLWAdlykrKEEVVKKLN 74

                          90       100
                  ....*....|....*....|....*...
gi 365807618   87 GGMRLQLDWPELASFPDYGLVRKRDDFD 114
Cdd:pfam07992  75 NGIEVLLGTEVVSIDPGAKKVVLEELVD 102
BetA COG2303
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ...
 8-41 2.52e-05

Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 441878 [Multi-domain]  Cd Length: 531  Bit Score: 46.36  E-value: 2.52e-05
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 365807618   8 SERSADVIVVGAGPAGSTTAYYLAK-AGLDVLLLE 41
Cdd:COG2303    1 MLEEYDYVIVGAGSAGCVLANRLSEdAGLRVLLLE 35
PRK06184 PRK06184
hypothetical protein; Provisional
 13-58 2.91e-05

hypothetical protein; Provisional


Pssm-ID: 235728 [Multi-domain]  Cd Length: 502  Bit Score: 46.13  E-value: 2.91e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 365807618  13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPR 58
Cdd:PRK06184   5 DVLIVGAGPTGLTLAIELARRGVSFRLIEKAPEPFPGSRGKGIQPR 50
PRK12843 PRK12843
FAD-dependent oxidoreductase;
13-45 3.96e-05

FAD-dependent oxidoreductase;


Pssm-ID: 237225 [Multi-domain]  Cd Length: 578  Bit Score: 45.88  E-value: 3.96e-05
                         10        20        30
                 ....*....|....*....|....*....|...
gi 365807618  13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAF 45
Cdd:PRK12843  18 DVIVIGAGAAGMSAALFAAIAGLKVLLVERTEY 50
HdrA COG1148
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
13-45 4.34e-05

Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];


Pssm-ID: 440762 [Multi-domain]  Cd Length: 563  Bit Score: 45.62  E-value: 4.34e-05
                         10        20        30
                 ....*....|....*....|....*....|...
gi 365807618  13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAF 45
Cdd:COG1148  142 RALVIGGGIAGMTAALELAEQGYEVYLVEKEPE 174
LhgO COG0579
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
8-42 6.57e-05

L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];


Pssm-ID: 440344 [Multi-domain]  Cd Length: 418  Bit Score: 44.75  E-value: 6.57e-05
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 365807618   8 SERSADVIVVGAGPAGSTTAYYLAKA-GLDVLLLEK 42
Cdd:COG0579    1 MMEMYDVVIIGAGIVGLALARELSRYeDLKVLVLEK 36
COG3573 COG3573
Predicted oxidoreductase [General function prediction only];
11-41 7.03e-05

Predicted oxidoreductase [General function prediction only];


Pssm-ID: 442794 [Multi-domain]  Cd Length: 551  Bit Score: 45.17  E-value: 7.03e-05
                         10        20        30
                 ....*....|....*....|....*....|.
gi 365807618  11 SADVIVVGAGPAGSTTAYYLAKAGLDVLLLE 41
Cdd:COG3573    5 DADVIVVGAGLAGLVAAAELADAGRRVLLLD 35
HI0933_like pfam03486
HI0933-like protein;
13-42 7.95e-05

HI0933-like protein;


Pssm-ID: 427330 [Multi-domain]  Cd Length: 406  Bit Score: 44.49  E-value: 7.95e-05
                          10        20        30
                  ....*....|....*....|....*....|
gi 365807618   13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 42
Cdd:pfam03486   2 DVIVIGGGAAGLMAAISAAKRGRRVLLIEK 31
FAD_oxidored pfam12831
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ...
 13-45 1.11e-04

FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.


Pssm-ID: 432816 [Multi-domain]  Cd Length: 420  Bit Score: 44.14  E-value: 1.11e-04
                          10        20        30
                  ....*....|....*....|....*....|...
gi 365807618   13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAF 45
Cdd:pfam12831   1 DVVVVGGGPAGVAAAIAAARAGAKVLLVERRGF 33
PRK06292 PRK06292
dihydrolipoamide dehydrogenase; Validated
 10-42 1.91e-04

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235774 [Multi-domain]  Cd Length: 460  Bit Score: 43.63  E-value: 1.91e-04
                         10        20        30
                 ....*....|....*....|....*....|...
gi 365807618  10 RSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 42
Cdd:PRK06292   2 EKYDVIVIGAGPAGYVAARRAAKLGKKVALIEK 34
PRK00711 PRK00711
D-amino acid dehydrogenase;
14-46 2.31e-04

D-amino acid dehydrogenase;


Pssm-ID: 234819 [Multi-domain]  Cd Length: 416  Bit Score: 43.25  E-value: 2.31e-04
                         10        20        30
                 ....*....|....*....|....*....|...
gi 365807618  14 VIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFP 46
Cdd:PRK00711   3 VVVLGSGVIGVTSAWYLAQAGHEVTVIDRQPGP 35
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 14-42 2.56e-04

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 43.20  E-value: 2.56e-04
                         10        20
                 ....*....|....*....|....*....
gi 365807618  14 VIVVGAGPAGSTTAYYLAKAGLDVLLLEK 42
Cdd:COG0493  124 VAVVGSGPAGLAAAYQLARAGHEVTVFEA 152
PRK12834 PRK12834
putative FAD-binding dehydrogenase; Reviewed
 12-41 2.60e-04

putative FAD-binding dehydrogenase; Reviewed


Pssm-ID: 183782 [Multi-domain]  Cd Length: 549  Bit Score: 43.35  E-value: 2.60e-04
                         10        20        30
                 ....*....|....*....|....*....|
gi 365807618  12 ADVIVVGAGPAGSTTAYYLAKAGLDVLLLE 41
Cdd:PRK12834   5 ADVIVVGAGLAGLVAAAELADAGKRVLLLD 34
PRK09126 PRK09126
FAD-dependent hydroxylase;
10-42 4.86e-04

FAD-dependent hydroxylase;


Pssm-ID: 236385 [Multi-domain]  Cd Length: 392  Bit Score: 42.24  E-value: 4.86e-04
                         10        20        30
                 ....*....|....*....|....*....|...
gi 365807618  10 RSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 42
Cdd:PRK09126   2 MHSDIVVVGAGPAGLSFARSLAGSGLKVTLIER 34
YhiN COG2081
Predicted flavoprotein YhiN [General function prediction only];
15-42 5.48e-04

Predicted flavoprotein YhiN [General function prediction only];


Pssm-ID: 441684 [Multi-domain]  Cd Length: 402  Bit Score: 41.96  E-value: 5.48e-04
                         10        20
                 ....*....|....*....|....*...
gi 365807618  15 IVVGAGPAGSTTAYYLAKAGLDVLLLEK 42
Cdd:COG2081    1 IVIGAGAAGLMAAITAAERGARVLLLEK 28
PRK07494 PRK07494
UbiH/UbiF family hydroxylase;
5-197 8.19e-04

UbiH/UbiF family hydroxylase;


Pssm-ID: 181001 [Multi-domain]  Cd Length: 388  Bit Score: 41.43  E-value: 8.19e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   5 TAASERSADVIVVGAGPAGSTTAYYLAKAGLDVLLLektafprekvcgDGLTPRA---TKQLVQMGIDVSEEAG-WLRNK 80
Cdd:PRK07494   1 SLMEKEHTDIAVIGGGPAGLAAAIALARAGASVALV------------APEPPYAdlrTTALLGPSIRFLERLGlWARLA 68

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  81 G-------LRIIAGGMRLqLDWPELA-------------SFPDYGLVRkrddfdEQLARQAQKAGArlyERCNVSAPLTD 140
Cdd:PRK07494  69 PhaaplqsMRIVDATGRL-IRAPEVRfraaeigedafgyNIPNWLLNR------ALEARVAELPNI---TRFGDEAESVR 138

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 365807618 141 PRTGRITgVEAKLGEektpvTFHAPLVVAADGnstRLSLAmglhrREdrPMGVAVRT 197
Cdd:PRK07494 139 PREDEVT-VTLADGT-----TLSARLVVGADG---RNSPV-----RE--AAGIGVRT 179
PRK07233 PRK07233
hypothetical protein; Provisional
 16-46 1.06e-03

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 41.03  E-value: 1.06e-03
                         10        20        30
                 ....*....|....*....|....*....|.
gi 365807618  16 VVGAGPAGSTTAYYLAKAGLDVLLLEKTAFP 46
Cdd:PRK07233   4 IVGGGIAGLAAAYRLAKRGHEVTVFEADDQL 34
COG3349 COG3349
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ...
 10-46 1.15e-03

Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];


Pssm-ID: 442577 [Multi-domain]  Cd Length: 445  Bit Score: 40.99  E-value: 1.15e-03
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 365807618  10 RSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFP 46
Cdd:COG3349    2 MPPRVVVVGGGLAGLAAAVELAEAGFRVTLLEARPRL 38
PRK08244 PRK08244
monooxygenase;
13-172 1.20e-03

monooxygenase;


Pssm-ID: 236199 [Multi-domain]  Cd Length: 493  Bit Score: 40.88  E-value: 1.20e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVQMGIDVSeeagwLRNKGLRIIAG---GM 89
Cdd:PRK08244   4 EVIIIGGGPVGLMLASELALAGVKTCVIERLKETVPYSKALTLHPRTLEILDMRGLLER-----FLEKGRKLPSGhfaGL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  90 RLQLDWPELASFPDYGLVRKRDDFDEQLARQAQKAGARLYERCNVSAPLTDPrtgriTGVEAKLGEEKTPVTFHAPLVVA 169
Cdd:PRK08244  79 DTRLDFSALDTSSNYTLFLPQAETEKVLEEHARSLGVEIFRGAEVLAVRQDG-----DGVEVVVRGPDGLRTLTSSYVVG 153


                 ...
gi 365807618 170 ADG 172
Cdd:PRK08244 154 ADG 156
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
 3-42 1.22e-03

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 40.93  E-value: 1.22e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 365807618   3 ETTAASERSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 42
Cdd:PRK11749 132 LFKRAPKTGKKVAVIGAGPAGLTAAHRLARKGYDVTIFEA 171
PRK07843 PRK07843
3-oxosteroid 1-dehydrogenase;
6-44 1.23e-03

3-oxosteroid 1-dehydrogenase;


Pssm-ID: 236111 [Multi-domain]  Cd Length: 557  Bit Score: 41.17  E-value: 1.23e-03
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 365807618   6 AASERSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTA 44
Cdd:PRK07843   2 AMTVQEYDVVVVGSGAAGMVAALTAAHRGLSTVVVEKAP 40
PRK05335 PRK05335
tRNA (uracil-5-)-methyltransferase Gid; Reviewed
 14-41 1.36e-03

tRNA (uracil-5-)-methyltransferase Gid; Reviewed


Pssm-ID: 235416  Cd Length: 436  Bit Score: 40.90  E-value: 1.36e-03
                         10        20
                 ....*....|....*....|....*...
gi 365807618  14 VIVVGAGPAGSTTAYYLAKAGLDVLLLE 41
Cdd:PRK05335   5 VNVIGAGLAGSEAAWQLAKRGVPVELYE 32
PRK05249 PRK05249
Si-specific NAD(P)(+) transhydrogenase;
13-42 1.77e-03

Si-specific NAD(P)(+) transhydrogenase;


Pssm-ID: 235373 [Multi-domain]  Cd Length: 461  Bit Score: 40.53  E-value: 1.77e-03
                         10        20        30
                 ....*....|....*....|....*....|
gi 365807618  13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 42
Cdd:PRK05249   7 DLVVIGSGPAGEGAAMQAAKLGKRVAVIER 36
PRK13800 PRK13800
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
3-42 1.82e-03

fumarate reductase/succinate dehydrogenase flavoprotein subunit;


Pssm-ID: 237512 [Multi-domain]  Cd Length: 897  Bit Score: 40.60  E-value: 1.82e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 365807618   3 ETTAASERSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 42
Cdd:PRK13800   5 ALTDALRLDCDVLVIGGGTAGTMAALTAAEHGANVLLLEK 44
PLN02976 PLN02976
amine oxidase
 14-60 1.91e-03

amine oxidase


Pssm-ID: 215527 [Multi-domain]  Cd Length: 1713  Bit Score: 40.62  E-value: 1.91e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 365807618   14 VIVVGAGPAGSTTAYYLAKAGLDVLLLEKtafpREKVCGDGLTPRAT 60
Cdd:PLN02976  696 IIVVGAGPAGLTAARHLQRQGFSVTVLEA----RSRIGGRVYTDRSS 738
NadB COG0029
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ...
 8-44 2.13e-03

Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 439800 [Multi-domain]  Cd Length: 521  Bit Score: 40.09  E-value: 2.13e-03
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 365807618   8 SERSADVIVVGAGPAGSTTAYYLAKAGlDVLLLEKTA 44
Cdd:COG0029    1 ERLKTDVLVIGSGIAGLSAALKLAERG-RVTLLTKGE 36
PLN02576 PLN02576
protoporphyrinogen oxidase
 3-52 2.34e-03

protoporphyrinogen oxidase


Pssm-ID: 215314 [Multi-domain]  Cd Length: 496  Bit Score: 40.00  E-value: 2.34e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 365807618   3 ETTAASERSADVIVVGAGPAGSTTAYYLAKA-GLDVLLLEKtafpREKVCG 52
Cdd:PLN02576   4 AEGSAAASSKDVAVVGAGVSGLAAAYALASKhGVNVLVTEA----RDRVGG 50
PRK15317 PRK15317
alkyl hydroperoxide reductase subunit F; Provisional
 5-37 2.51e-03

alkyl hydroperoxide reductase subunit F; Provisional


Pssm-ID: 237942 [Multi-domain]  Cd Length: 517  Bit Score: 40.14  E-value: 2.51e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 365807618   5 TAASERSA---------DVIVVGAGPAGSTTAYYLAKAGLDV 37
Cdd:PRK15317 196 TGAAARAAeelnakdpyDVLVVGGGPAGAAAAIYAARKGIRT 237
PRK12409 PRK12409
D-amino acid dehydrogenase small subunit; Provisional
 14-46 2.65e-03

D-amino acid dehydrogenase small subunit; Provisional


Pssm-ID: 237093 [Multi-domain]  Cd Length: 410  Bit Score: 40.01  E-value: 2.65e-03
                         10        20        30
                 ....*....|....*....|....*....|...
gi 365807618  14 VIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFP 46
Cdd:PRK12409   4 IAVIGAGITGVTTAYALAQRGYQVTVFDRHRYA 36
PRK11445 PRK11445
FAD-binding protein;
13-68 2.81e-03

FAD-binding protein;


Pssm-ID: 183139 [Multi-domain]  Cd Length: 351  Bit Score: 39.66  E-value: 2.81e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  13 DVIVVGAGPAGSTTAYYLAKAgLDVLLLEKTAF----PREKVCGDGLTPRATKQLVQMGI 68
Cdd:PRK11445   3 DVAIIGLGPAGSALARLLAGK-MKVIAIDKKHQcgteGFSKPCGGLLAPDAQKSFAKDGL 61
PRK07804 PRK07804
L-aspartate oxidase; Provisional
 9-42 3.17e-03

L-aspartate oxidase; Provisional


Pssm-ID: 236102 [Multi-domain]  Cd Length: 541  Bit Score: 39.57  E-value: 3.17e-03
                         10        20        30
                 ....*....|....*....|....*....|....
gi 365807618   9 ERSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 42
Cdd:PRK07804  14 RDAADVVVVGSGVAGLTAALAARRAGRRVLVVTK 47
PRK12814 PRK12814
putative NADPH-dependent glutamate synthase small subunit; Provisional
 14-46 3.24e-03

putative NADPH-dependent glutamate synthase small subunit; Provisional


Pssm-ID: 139246 [Multi-domain]  Cd Length: 652  Bit Score: 39.71  E-value: 3.24e-03
                         10        20        30
                 ....*....|....*....|....*....|...
gi 365807618  14 VIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFP 46
Cdd:PRK12814 196 VAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQA 228
PRK07364 PRK07364
FAD-dependent hydroxylase;
2-50 3.33e-03

FAD-dependent hydroxylase;


Pssm-ID: 236001 [Multi-domain]  Cd Length: 415  Bit Score: 39.62  E-value: 3.33e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 365807618   2 SETTAASERSA--DVIVVGAGPAGSTTAYYLAKAGLDVLLLEktAFPREKV 50
Cdd:PRK07364   7 TSPTLPSTRSLtyDVAIVGGGIVGLTLAAALKDSGLRIALIE--AQPAEAA 55
TrmFO COG1206
Folate-dependent tRNA-U54 methylase TrmFO/GidA [Translation, ribosomal structure and ...
 13-41 3.42e-03

Folate-dependent tRNA-U54 methylase TrmFO/GidA [Translation, ribosomal structure and biogenesis]; Folate-dependent tRNA-U54 methylase TrmFO/GidA is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 440819  Cd Length: 436  Bit Score: 39.66  E-value: 3.42e-03
                         10        20
                 ....*....|....*....|....*....
gi 365807618  13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLE 41
Cdd:COG1206    3 PVTVIGGGLAGSEAAWQLAERGVPVRLYE 31
PRK05714 PRK05714
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
 295-356 3.42e-03

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional


Pssm-ID: 168201 [Multi-domain]  Cd Length: 405  Bit Score: 39.43  E-value: 3.42e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 365807618 295 RQPHYTR----GLLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHSRATEAGRELALQRYPR 356
Cdd:PRK05714 275 RQRHAKRyvepGLALIGDAAHTIHPLAGQGVNLGFLDAAVLAEVLLHAAERGERLADVRVLSRFER 340
FadH2 COG0446
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ...
 14-70 3.99e-03

NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];


Pssm-ID: 440215 [Multi-domain]  Cd Length: 322  Bit Score: 39.02  E-value: 3.99e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 365807618  14 VIVVGAGPAGSTTAYYLAKAGLDVLLLEKTA--FPRekvCGDGLTPRATKQLVQMGIDV 70
Cdd:COG0446  127 AVVIGGGPIGLELAEALRKRGLKVTLVERAPrlLGV---LDPEMAALLEEELREHGVEL 182
PRK07190 PRK07190
FAD-binding protein;
8-67 4.10e-03

FAD-binding protein;


Pssm-ID: 235955 [Multi-domain]  Cd Length: 487  Bit Score: 39.41  E-value: 4.10e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618   8 SERSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRaTKQLVQMG 67
Cdd:PRK07190   2 STQVTDVVIIGAGPVGLMCAYLGQLCGLNTVIVDKSDGPLEVGRADALNAR-TLQLLELV 60
PRK12844 PRK12844
3-ketosteroid-delta-1-dehydrogenase; Reviewed
 9-44 4.93e-03

3-ketosteroid-delta-1-dehydrogenase; Reviewed


Pssm-ID: 183787 [Multi-domain]  Cd Length: 557  Bit Score: 38.97  E-value: 4.93e-03
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 365807618   9 ERSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTA 44
Cdd:PRK12844   4 DETYDVVVVGSGGGGMCAALAAADSGLEPLIVEKQD 39
PRK06370 PRK06370
FAD-containing oxidoreductase;
13-42 4.96e-03

FAD-containing oxidoreductase;


Pssm-ID: 235787 [Multi-domain]  Cd Length: 463  Bit Score: 39.03  E-value: 4.96e-03
                         10        20        30
                 ....*....|....*....|....*....|
gi 365807618  13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 42
Cdd:PRK06370   7 DAIVIGAGQAGPPLAARAAGLGMKVALIER 36
PRK13984 PRK13984
putative oxidoreductase; Provisional
 10-46 5.32e-03

putative oxidoreductase; Provisional


Pssm-ID: 172486 [Multi-domain]  Cd Length: 604  Bit Score: 38.98  E-value: 5.32e-03
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 365807618  10 RSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFP 46
Cdd:PRK13984 282 KNKKVAIVGSGPAGLSAAYFLATMGYEVTVYESLSKP 318
PRK12771 PRK12771
putative glutamate synthase (NADPH) small subunit; Provisional
 14-42 5.54e-03

putative glutamate synthase (NADPH) small subunit; Provisional


Pssm-ID: 237198 [Multi-domain]  Cd Length: 564  Bit Score: 39.09  E-value: 5.54e-03
                         10        20
                 ....*....|....*....|....*....
gi 365807618  14 VIVVGAGPAGSTTAYYLAKAGLDVLLLEK 42
Cdd:PRK12771 140 VAVIGGGPAGLSAAYHLRRMGHAVTIFEA 168
PRK12831 PRK12831
putative oxidoreductase; Provisional
 14-41 5.61e-03

putative oxidoreductase; Provisional


Pssm-ID: 183780 [Multi-domain]  Cd Length: 464  Bit Score: 38.85  E-value: 5.61e-03
                         10        20
                 ....*....|....*....|....*...
gi 365807618  14 VIVVGAGPAGSTTAYYLAKAGLDVLLLE 41
Cdd:PRK12831 143 VAVIGSGPAGLTCAGDLAKMGYDVTIFE 170
carotene-cycl TIGR01790
lycopene cyclase family protein; This family includes lycopene beta and epsilion cyclases ...
 13-41 6.18e-03

lycopene cyclase family protein; This family includes lycopene beta and epsilion cyclases (which form beta and delta carotene, respectively) from bacteria and plants as well as the plant capsanthin/capsorubin and neoxanthin cyclases which appear to have evolved from the plant lycopene cyclases. The plant lycopene epsilon cyclases also transform neurosporene to alpha zeacarotene.


Pssm-ID: 130850 [Multi-domain]  Cd Length: 388  Bit Score: 38.57  E-value: 6.18e-03
                          10        20
                  ....*....|....*....|....*....
gi 365807618   13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLE 41
Cdd:TIGR01790   1 DLAVIGGGPAGLAIALELARPGLRVQLIE 29
ubiF PRK08020
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
 283-356 6.43e-03

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed


Pssm-ID: 181199 [Multi-domain]  Cd Length: 391  Bit Score: 38.43  E-value: 6.43e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 365807618 283 PIRGAALPMAFNRQPHYTR-GLLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHSRATEAGRELALQRYPR 356
Cdd:PRK08020 262 PVAAGAFPLTRRHALQYVQpGLALVGDAAHTINPLAGQGVNLGYRDVDALLDVLVNARSYGEAWASEAVLKRYQR 336
PRK07121 PRK07121
FAD-binding protein;
10-44 7.62e-03

FAD-binding protein;


Pssm-ID: 180854 [Multi-domain]  Cd Length: 492  Bit Score: 38.33  E-value: 7.62e-03
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 365807618  10 RSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTA 44
Cdd:PRK07121  19 DEADVVVVGFGAAGACAAIEAAAAGARVLVLERAA 53
PRK06847 PRK06847
hypothetical protein; Provisional
 13-203 8.16e-03

hypothetical protein; Provisional


Pssm-ID: 235874 [Multi-domain]  Cd Length: 375  Bit Score: 38.32  E-value: 8.16e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  13 DVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTafPREKVCGDGLTP-----RATKQLvqmGI--DVSEEAGWLRNKGLRII 85
Cdd:PRK06847   6 KVLIVGGGIGGLSAAIALRRAGIAVDLVEID--PEWRVYGAGITLqgnalRALREL---GVldECLEAGFGFDGVDLFDP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 365807618  86 AGGMRLQLDWPELASfPDY----GLVRKRddFDEQLARQAQKAGARLYERCNVSApLTDprtgRITGVEaklgeektpVT 161
Cdd:PRK06847  81 DGTLLAELPTPRLAG-DDLpgggGIMRPA--LARILADAARAAGADVRLGTTVTA-IEQ----DDDGVT---------VT 143

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 365807618 162 F------HAPLVVAADG-NSTRLSLAMGlHRREDRPMGVAV-RTYFtsPR 203
Cdd:PRK06847 144 FsdgttgRYDLVVGADGlYSKVRSLVFP-DEPEPEYTGQGVwRAVL--PR 190
gltD PRK12810
glutamate synthase subunit beta; Reviewed
 14-42 8.43e-03

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 38.22  E-value: 8.43e-03
                         10        20
                 ....*....|....*....|....*....
gi 365807618  14 VIVVGAGPAGSTTAYYLAKAGLDVLLLEK 42
Cdd:PRK12810 146 VAVVGSGPAGLAAADQLARAGHKVTVFER 174
mnmC PRK01747
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ...
 6-42 8.67e-03

bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;


Pssm-ID: 234978 [Multi-domain]  Cd Length: 662  Bit Score: 38.29  E-value: 8.67e-03
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 365807618   6 AASERSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEK 42
Cdd:PRK01747 255 PGSPKARDAAIIGGGIAGAALALALARRGWQVTLYEA 291
PLN02676 PLN02676
polyamine oxidase
 3-43 9.19e-03

polyamine oxidase


Pssm-ID: 215362 [Multi-domain]  Cd Length: 487  Bit Score: 38.16  E-value: 9.19e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 365807618   3 ETTAASERSADVIVVGAGPAGSTTAYYLAKAGL-DVLLLEKT 43
Cdd:PLN02676  18 VAAMDAKPSPSVIIVGAGMSGISAAKTLSEAGIeDILILEAT 59
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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