|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
6.68e-163 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 458.52 E-value: 6.68e-163
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 1 MNPQAKLISTLSLLLGTTITISSNHWAMAWTGLEINTLAILPLISKPHHPRAIEATTKYFLVQAAASTLLLFSSTTNALF 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 81 TGQWDITQLTHPISCLLMTAAISIKLGLAPFHFWFPEVLQGSPLTTSLLLATAMKFPPITLLLLTSPSLNYTLLTIMAIS 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 161 SAALGGWAGLNQTQTRKILAFSSISHLGWMTIIIIYNPKLTLITFYLYCLMTAAIFLTFNITKTLKLSSMMTAWTKIPSL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 241 SATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLGLFFYLRLAYCATITLPPNSNNYMKLWQTNKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 355342348 321 VNFLTTTLITLTILLLPLSPMILTLP 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
5.45e-134 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 385.31 E-value: 5.45e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 1 MNPQAKLISTLSLLLGTTITISSNHWAMAWTGLEINTLAILPLISKPHHPRAIEATTKYFLVQAAASTLLLFSSTTNALF 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 81 TGQWDITQLTHPISCLLMTAAISIKLGLAPFHFWFPEVLQGSPLTTSLLLATAMKFPPITLLLLTSPSlNYTLLTIMAIS 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 161 SAALGGWAGLNQTQTRKILAFSSISHLGWMTIIIIYNPKLTLITFYLYCLMTAAIFLTFNITKTLKLSSMMTAWTKIPSL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 241 SATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLGLFFYLRLAYCATITLPPNSNNYMKLWQTNKP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*.
gi 355342348 321 -VNFLTTTLITLTILLLPLSPMILTL 345
Cdd:MTH00135 320 qLTLPLAISTTATLMLLPLTPAILAL 345
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
5.26e-128 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 370.02 E-value: 5.26e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 1 MNPQAKLISTLSLLLGTTITISSNHWAMAWTGLEINTLAILPLISKPHHPRAIEATTKYFLVQAAASTLLLFSSTTNALF 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 81 TGQWDITQLTHPISCLLMTAAISIKLGLAPFHFWFPEVLQGSPLTTSLLLATAMKFPPITLLLLTSPSLNYTLLTIMAIS 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 161 SAALGGWAGLNQTQTRKILAFSSISHLGWMTIIIIYNPKLTLITFYLYCLMTAAIFLTFNITKTLKLSSMMTAWTKIPSL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 241 SATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLGLFFYLRLAYCATITLPPNSNNYMKLWQTNKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*
gi 355342348 321 VNFLTTTLITLTILLLPLSPMILTL 345
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
4.55e-118 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 344.91 E-value: 4.55e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 1 MNPQAKLISTLSLLLGTTITISSNHWAMAWTGLEINTLAILPLISKPHHPRAIEATTKYFLVQAAASTLLLFSSTTNALF 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 81 TGQWDITQLTHPISCLLMTAAISIKLGLAPFHFWFPEVLQGSPLTTSLLLATAMKFPPITLLLLTSPSLNYTLLTIMAIS 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 161 SAALGGWAGLNQTQTRKILAFSSISHLGWMTIIIIYNPKLTLITFYLYCLMTAAIFLTFNITKTLKLSSMMTAWTKIPSL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 241 SATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLGLFFYLRLAYCATITLPPNSNNYMKLWQ-TNK 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQfENT 320
|
330 340
....*....|....*....|....*.
gi 355342348 320 PVNFLTTTLITLTILLLPLSPMILTL 345
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
5.31e-96 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 288.79 E-value: 5.31e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 1 MNPQAKLISTLSLLLGTTITISSNHWAMAWTGLEINTLAILPLISKPHHPRAIEATTKYFLVQAAASTLLLFSSTTNALF 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 81 TGQWDITQLTHPISCLLMTAAISIKLGLAPFHFWFPEVLQGSPLTTSLLLATAMKFPPITLLLLTSPSLNYTLLTIMAIS 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 161 SAALGGWAGLNQTQTRKILAFSSISHLGWMTIIIIYNPKLTLITFYLYCLMTAAIFLTFNITKTLKLSSMMTAWTKIPSL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 241 SATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLGLFFYLRLAYCATITLPPNSNNYMKLWQTNKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 355342348 321 VNFLTTTLITLTILLLPLSPMILTLP 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-323 |
3.31e-86 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 263.71 E-value: 3.31e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 1 MNPQAKLISTLSLLLGTTITISSNHWAMAWTGLEINTLAILPLISKPHHPRAIEATTKYFLVQAAASTLLLFSSTTNALF 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 81 TGQWDITQLTHPISCLLMTAAISIKLGLAPFHFWFPEVLQGSPLTTSLLLATAMKFPPITLLLLTSPSLNYTLLTIMAIS 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 161 SAALGGWAGLNQTQTRKILAFSSISHLGWMTIIIIYNPKLTLITFYLYCLMTAAIFLTFNITKTLKLSSMMTAWTKIPSL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 241 SATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLGLFFYLRLAYCATITLPPNSNNYMKLWQTNKP 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
...
gi 355342348 321 VNF 323
Cdd:MTH00041 321 ITV 323
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
1.20e-62 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 202.75 E-value: 1.20e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 1 MNPQAKLISTLSLLLGTTITISSNHWAMAWTGLEINTLAILPLISKPHHPRAIEATTKYFLVQAAASTLLLFSSTTNALF 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 81 TGqwditqLTHPISCLLMTAAISIKLGLAPFHFWFPEVLQGSPLTTSLLLATAMKFPPITLLLLTSpslNYTLLTIMAIS 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLI---NNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 161 SAALGGWAGLNQTQTRKILAFSSISHLGWMTIIIIYNPKLTLITFYLYCLMTAAIFLTFNITKTLKLSSMMTAWTKIPSL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 241 SATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLGLFFYLRLAYCAtITLPPNSNNYMKLWQTNKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSS-LMLNYNKNKWNLKKKKNKF 311
|
330 340
....*....|....*....|...
gi 355342348 321 VNFLTTTLITLTILLLPLSPMIL 343
Cdd:MTH00160 312 SLILNFLSFISLFGLILSSLLFL 334
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
13-302 |
2.03e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 173.53 E-value: 2.03e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 13 LLLGTTITISSNHWAMAWTGLEINTLAILPLISKPHHPRAIEATTKYFLVQAAASTLLLFSSTTNALFTGQWDITqlthp 92
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM----- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 93 iscLLMTAAISIKLGLAPFHFWFPEVLQGSPLTTSLLLATAMKFPPITLLLLTSPSLN-YTLLTIMAISSAALGGWAGLN 171
Cdd:MTH00144 88 ---SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWlAYLLCVISVLSALVGSIGGLN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 172 QTQTRKILAFSSISHLGWMTIIIIYNPKLTLITFYLYCLMTAAIFLTFNiTKTLKLSSMMTAWTKIPSLSATLMLALLSL 251
Cdd:MTH00144 165 QTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLW-SGDSGSMKDLGSLKPSYKTGLSIISLLLSL 243
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 355342348 252 AGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLGLFFYLRLAYCATI 302
Cdd:MTH00144 244 GGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
12-310 |
1.49e-48 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 166.11 E-value: 1.49e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 12 SLLLGTTITISSNHWAMAWTGLEINTLAILPLISKPHHPRAIEATTKYFLVQAAASTLLLFSSTTnalftgQWDITQLTH 91
Cdd:MTH00011 14 TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM------MWSFPSLLK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 92 PISCLLMTAAISIKLGLAPFHFWFPEVLQGSPLTTSLLLATAMKFPPITLLLLTSPSLNYTLLTIMAISSAALGGWAGLN 171
Cdd:MTH00011 88 NITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMN 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 172 QTQTRKILAFSSISHLGWMTIIIIYNPKLTLITFYLYCLMTAAIFLTFNITKTLKLSSMMTAWTKIPSLSATLMLALLSL 251
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSL 247
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 355342348 252 AGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLGLFFYLRLAYcATITLPPNSNN 310
Cdd:MTH00011 248 GGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS 305
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
11-298 |
7.01e-42 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 148.28 E-value: 7.01e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 11 LSLLLGTTITISSNHWAMAWTGLEINTLAILPLISKPHHPRAIEATTKYFLVQAAASTLLLFSSTTNALftgqwdiTQLT 90
Cdd:MTH00197 5 FIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFS-------NLYL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 91 HPISCLLMTAAISIKLGLAPFHFWFPEVLQGSPLTTSLLLATAMKFPPITLLLLTSPslNYTLLTIMAISSAALGGWAGL 170
Cdd:MTH00197 78 SLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGIGGM 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 171 NQTQTRKILAFSSISHLGWMTIIIIYNPKLTLITFYLYCLMTAAIFLTFNITKTLKLSSMMTAWTKIPSLSATLMLALLS 250
Cdd:MTH00197 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLS 235
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 355342348 251 LAGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLGLFFYLRLAY 298
Cdd:MTH00197 236 LGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-298 |
5.01e-37 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 138.71 E-value: 5.01e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 14 LLGTTITISSNHWAMAWTGLEINTLAILPLIS-KPHHPRAIEATTKYFLVQAAASTLLLFSSTTNALFTGQWDITQLTHP 92
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 93 IS------------CLLMTAAISIKLGLAPFHFWFPEVLQGSPLTTSLLLATAMK--------------FPPITLLLLts 146
Cdd:COG1007 192 LAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaafaallrllveaFPGLAADWQ-- 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 147 pslnyTLLTIMAISSAALGGWAGLNQTQTRKILAFSSISHLGWMTIIIIYNPKLTL--ITFYL--YCLMTAAIFLTFNI- 221
Cdd:COG1007 270 -----LLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILLl 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 222 ----TKTLKLSSMMTAWTKIPSLSATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLGLFFYLRLA 297
Cdd:COG1007 345 srkgGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVV 424
|
.
gi 355342348 298 Y 298
Cdd:COG1007 425 K 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
4.64e-31 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 122.24 E-value: 4.64e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 14 LLGTTITISSNHWAMAWTGLEINTLAILPLIS-KPHHPRAIEATTKYFLVQAAASTLLLFSSTTNALFTGQWDITQLTHP 92
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 93 IS------------CLLMTAAISIKLGLAPFHFWFPEVLQGSPLTTSLLLATAMK---FPPI----TLLLLTSPSLNYTL 153
Cdd:PRK05777 193 LAdgsgnsllllfgLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLlrllVVAFGGLSEDWQQV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 154 LTIMAISSAALGGWAGLNQTQTRKILAFSSISHLGWMTIIIIYNPKLTL--ITFYL--YCLMTAAIFL--------TFNI 221
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFGvisllrrkGGEA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 355342348 222 TKTLKLSSMmtAWTKiPSLSATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLGLFFYLRL 296
Cdd:PRK05777 353 ESISDFAGL--SKRS-PLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
1.08e-30 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 119.36 E-value: 1.08e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 13 LLLGTTITISSNHWAMAWTGLEINTLAILPLI-SKPHHPRAIEATTKYFLVQAAASTLLLFS-------------STTNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 79 LFTGQWDITQLTHPISCLLMTAAISIKLGLAPFHFWFPEVLQGSPLTTSLLLATAMKFPpiTLLLLTSPSLNYTLLTIMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLG--IFSILVSIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 159 ISSAALGGWAGLNQTQTRKILAFSSISHLGWMTIII----IYNPKLTLITFYLYCLMTAAIF---LTFNITKTLkLSSMM 231
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeigsFESIQASLVYLFIYIIMSICVFsiiLALNVYKNL-IIEFS 238
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 355342348 232 TAWTKIPSLSATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLGLFFYLRL 296
Cdd:MTH00196 239 GLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
1.63e-29 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 114.72 E-value: 1.63e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 23 SNHWAMAWTGLEINTLAILPLI-SKPHHPRAIEATTKYFLVQAAASTLLLFSSTTNALFTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 91 HPISCLLMTAAISIKLGLAPFHFWFPEVLQGSPLTTSLLLA-TAMKFPPITLLLLTSPSLNYT-----LLTIMAISSAAL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGYGLIRRSLLYLPSSpfiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 165 GGWAGLNQTQTRKILAFSSISHLGWMTIII----IYNPKLTLITFYLYCLMTAAIFLTFN-----ITKTLKLSSMMTAWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGsviyrRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 355342348 236 KIPSLSATLMLALLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
2.06e-27 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 111.96 E-value: 2.06e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 14 LLGTTITISSNHWAMAWTGLEINTLAILPLIS-KPHHPRAIEATTKYFLVQAAASTLLLFSSTTNALFTGQWDITQLTHP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 93 ------------ISCLLMTAAISIKLGLAPFHFWFPEVLQGSPLTTSLLLATAMK-------FPPITLLLLTSPSLNYTL 153
Cdd:TIGR01770 192 lsngmlnislllLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaifavfLRLFLYILFGFSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 154 LTIMAISSAALGGWAGLNQTQTRKILAFSSISHLGWMTIIIIYNPKLTL--ITFYL--YCLMTAAIFLTFNITKTLK--- 226
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYIfiYALMSLGAFGVLSLLRSYKdew 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 355342348 227 ---LSSMMTAWTKIPSLSATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLGLFFYLRLA 297
Cdd:TIGR01770 352 ieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
11-267 |
8.74e-26 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 107.02 E-value: 8.74e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 11 LSLLLGTTITISSNHWAMAWTGLEINTLAILPLIS-KPHHPRAIEATTKYFLVQAAASTLLLFSSTTNALFTGQWDI--- 86
Cdd:MTH00199 104 LIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqgi 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 87 -TQLTHPISCLLMTAAISIKLGLAPFHFWFPEVLQGSPLTTSLLLATAMKFPPITLLLLTSPSLNYTLltIMAISSAALG 165
Cdd:MTH00199 184 nSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVL--ICAVLSIIYG 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 166 GWAGLNQTQTRKILAFSSISHLGW----MTIIIIYNPKLTLITFYLYCLMTAAIF---LTFNITKTL--KLSSMMtawTK 236
Cdd:MTH00199 262 AIGALNQTKIKRLLAYSGIGHMGFilfgVAIGSFESIQASLIYMIIYVIMSICSFsiiLSLKLTKGLivEVSGLS---RK 338
|
250 260 270
....*....|....*....|....*....|.
gi 355342348 237 IPSLSATLMLALLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00199 339 NPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-296 |
5.39e-23 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 99.07 E-value: 5.39e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 13 LLLGTTITISSNHWAMAWTGLEINTLAILPLISKPHHPRAIEATTKYFLVQAAASTLLLFSSTTNALFTGQWDITQLTHP 92
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 93 IS----------CLLMTAAISIKLGLAPFHFWFPEVLQGSPLTTSLLLATAMK--------------FPPITLLLLTsps 148
Cdd:COG0651 196 LAeldpglllaaFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTkvgvyailrvltllFGADPALFLG--- 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 149 lnyTLLTIMAISSAALGGWAGLNQTQTRKILAFSSISHLGWMTIIIIYNPKLTLITFYLYC----LMTAAIFLT----FN 220
Cdd:COG0651 273 ---TLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFLAagaiER 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 355342348 221 ITKTLKLSSMMTAWTKIPSLSATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLGLFFYLRL 296
Cdd:COG0651 350 ATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-296 |
2.87e-18 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 85.68 E-value: 2.87e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 3 PQAKLISTLSLLLGTTITISSNHWAMAWTGLEINTLAILPLISKPHHPRAI---------EATTKYFLVQAAASTLLLFS 73
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 74 STTNALFTGQ--------------WDITQLTHPISCLLMTAAISIKLGLAPFHFWFPEVLQGSPLTTSLLLATAMKFppI 139
Cdd:MTH00198 267 CALYFGFTGNegmlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--T 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 140 TLLLLTSPSLNYTLLTIMAISSAALGGWAGLNQTQTRKILAFSSISHLGWMTIII---IYNPKLTLITFYLYCLMTAaiF 216
Cdd:MTH00198 345 VYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVsagTYESLQASWTYAVTYLVSA--L 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 217 LTFNITKTL------------------------KLSSMMTAWTKIPSLSATLMLALLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:MTH00198 423 ASFTVICTLeefgtrtptsrqrdgsfgnynlvrRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIK 502
|
330 340 350
....*....|....*....|....*....|.
gi 355342348 273 QEMTSTATIMAFLSLLGL-------FFYLRL 296
Cdd:MTH00198 503 IAFSSSLSIYYLVALFAIictcisaFYYIRI 533
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-296 |
1.78e-17 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 83.13 E-value: 1.78e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 51 RAIEATTKYFLVQAAASTLLLFS-STTNALFTGQWDI---------TQLTHPISCLL----MTAAISIKLGLAPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGfSWLYGLSGGEIELqeivnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 117 EVLQGSPL-----------TTSLLLATAM---KFPPITLLLltspslnYTLLTIMAISSAALGGWAGLNQTQTRKILAFS 182
Cdd:CHL00049 239 DVYEGSPTpvvaflsvtskVAASALATRIfdiPFYFSSNEW-------HLLLEILAILSMILGNLIAITQTSMKRMLAYS 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 183 SISHLGWMTIIII-------YNPKLTLITFYLYC-LMTAAIFLTFNI-TKTLKLSSMMTAWTKIPSLSATLMLALLSLAG 253
Cdd:CHL00049 312 SIGQIGYVIIGIIvgdsndgYASMITYMLFYIFMnLGTFACIVLFGLrTGTDNIRDYAGLYTKDPFLALSLALCLLSLGG 391
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 355342348 254 LPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLGLFFYLRL 296
Cdd:CHL00049 392 IPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKI 434
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
5.06e-14 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 72.78 E-value: 5.06e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 50 PRAIEATTKYFLVQAAASTLLLF---------------SSTTNALFTGQwditQLTHPISCLLMTAAISIKLGLAPFHFW 114
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgssllyglsggstqlSAIALALITSP----SLGLALALVFVIAGIAFKISAVPFHQW 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 115 FPEVLQGSPLTTSLLLATAMK--------------FPPITLLLltspslnYTLLTIMAISSAALGGWAGLNQTQTRKILA 180
Cdd:PRK02504 233 TPDVYEGSPTPVVAFLSVGSKaagfalairllvtaFPSFDEQW-------KLLFTALAILSMVLGNVVALAQTSMKRMLA 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 181 FSSISHLGWMTIIIIYNPK--LTLITFYL--YCLMTAAIFLT---FNI-TKTLKLSSMMTAWTKIPSLSATLMLALLSLA 252
Cdd:PRK02504 306 YSSIGQAGFVMIGLVAGTEagYASMVFYLlaYLFMNLGAFACvilFSLrTGTDQISDYAGLYQKDPLLTLGLSLCLLSLG 385
|
250
....*....|.
gi 355342348 253 GLPPLTGFLPK 263
Cdd:PRK02504 386 GIPPLAGFFGK 396
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-310 |
1.19e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 65.29 E-value: 1.19e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 33 LEINTLAILPLISKPHHPRAIEATTKYFLVQAAASTLLLFSSTTNALFTGQWDITQLTH--PISCLLMTA------AISI 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGalAENPTVVTAfgfvllALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 105 KLGLAPFHFWFPEVLQG-SPLTTSLLLATAMKFP---------PITLLLLTSPSLNYTLLTIMAISSAALGGWAGLNQTQ 174
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAvyaliriyfTVFGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 175 TRKILAFSSISHLGWMTIIIIYNPKLTLI--TFYL--YCLMTAAIFLT----FNITKTLKLSSMMTAWTKIPSLSATLML 246
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAagaiEVTYGTRRLSELSGLGRRMPLTAAAFAV 374
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 355342348 247 ALLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLGLFFYLRLAYCATITLPPNSNN 310
Cdd:PRK08375 375 ASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSE 438
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-292 |
1.60e-11 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 65.10 E-value: 1.60e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 49 HPRAIEATTKYFLVQAAASTLLLFSSTTNALFTGQW--DITQLT-HPIS-------CLLMTAAISIKLGLAPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAaAPLPltaqlllFLAFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 119 LQGSPLTTSLLLATAMK--------------FPPITLLLLtspslnyTLLTIMAISSAALGGWAGLNQTQTRKILAFSSI 184
Cdd:COG1008 236 HVEAPTAGSVLLAGVLLkmggygllrfalplFPEASAYFA-------PLLAALGVIGIIYGALVALAQTDLKRLIAYSSV 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 185 SHLGWMTI-IIIYNPK-LTLITFYL--YCLMTAAIFL----TFNITKTLKLSSMMTAWTKIPSLSATLMLALLSLAGLPP 256
Cdd:COG1008 309 SHMGFVLLgIFALNPLgLQGAVLQMvsHGLITAALFLlvgvLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPG 388
|
250 260 270
....*....|....*....|....*....|....*.
gi 355342348 257 LTGFLPKWLIIQELTKqemtsTATIMAFLSLLGLFF 292
Cdd:COG1008 389 TSGFVGEFLVLLGAFQ-----VNPWLAILAALGLIL 419
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-294 |
1.72e-10 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 61.94 E-value: 1.72e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 34 EINTLAILPLISKPHHpRAIEATTKYFLVQAAASTLLLFSSTTNALFTGQWDIT-------QLTHP----ISCLLMTAAI 102
Cdd:PRK08668 128 EIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisqgliNDTSTgfalIVFLFLLAFG 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 103 SIKLGLAPFHFWFPEVLQGSPLTTSLLLATA------------------MKFPPITLLLLTSPSLNYTLLTIMAISsAAL 164
Cdd:PRK08668 207 VAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQlsklgaygfllvlyvlpgTKLFSEFGTYRGVPLFNYILAWLGNIS-IIV 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 165 GGWAGLNQTQTRKILAFSSISHLGWMTIIIIYNPKLT----LITFYLYCLMTAAIFLTFNI----TKTLKLSSMMTAWTK 236
Cdd:PRK08668 286 GTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfaggLFHVFNHALFKGLFFLIFAAviyrTGTTKISEMGGLIEK 365
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 355342348 237 IPSLSATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATiMAFLSLLGLFFYL 294
Cdd:PRK08668 366 MPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAF-MAFFGSIGSFLYV 422
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
8.35e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 59.73 E-value: 8.35e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 33 LEINTLAILPLIS-KPHHPRAIEATTKYFLVQAAASTLLLFSSttnALFTGQWDI-------------TQLTHPISCLLM 98
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTlnmaylavkmsenPTVVAKIALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 99 TAAISIKLGLAPFHFWFPEVLQGSP--LTTSLLLATAMKFPPITLLLLTSPSLNYTLLT------IMAISSAALGGWAGL 170
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAAPssISAMLLVIKQAGLYALARVLFSIYGPAINLATvgwviiILGCLTMFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 171 NQTQTRKILAFSSISHLGWM------TIIIIYNPKLTLITF----------YLYCLMTAAIFLT----FNITKTLKLSSM 230
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMllglgvGLAALGDPAMASYGEialaggiyhiVNHALYKALLFLTagavIYETGTRNLNEL 386
|
250 260 270
....*....|....*....|....*....|....*.
gi 355342348 231 MTAWTKIPSLSATLMLALLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 387 GGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-292 |
4.20e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 57.64 E-value: 4.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 50 PRAIEATTKYFLVQAAASTLLLFSSTTNALFTGQ-WDITQL-THPISC----LLMTA---AISIKLGLAPFHFWFPEVLQ 120
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGtFDLLELlNLPLPFgvqtWLFLAffiAFAVKVPLFPLHTWLPDAHV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 121 GSPLTTSLLLA-TAMK-------------FPPITLLLLtspslnyTLLTIMAISSAALGGWAGLNQTQTRKILAFSSISH 186
Cdd:TIGR01972 232 EAPTAGSVILAgVLLKmgtygflrfnlplFPDASLYFA-------PVLAALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 187 LGWMTIIIIYNPKLTLI--TFYLYC--LMTAAIFLTFNI----TKTLKLSSMMTAWTKIPSLSATLMLALLSLAGLPPLT 258
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISgaVFQMIShgLITAALFLLVGVlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
250 260 270
....*....|....*....|....*....|....
gi 355342348 259 GFLPKWLIIQELTKqemtsTATIMAFLSLLGLFF 292
Cdd:TIGR01972 385 GFVGEFLILLGSFK-----VNPVVAFLAALGIVL 413
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
92-292 |
9.48e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 56.70 E-value: 9.48e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 92 PISCLLMTAAISiKLGLAPFHFWFPEVLQGsPLTTSLLL-ATAM---------KFPPITLLLLTSPslnyTLLTIMAISS 161
Cdd:COG1009 212 LILLLLLLGAFG-KSAQFPLHFWLPDAMEG-PTPVSALLhAATMvkagvyllaRLSPLFALSPVWL----TVVAIIGAIT 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 162 AALGGWAGLNQTQTRKILAFSSISHLGWMTIIIiynpKLTLITFYLYCLMT-----AAIFL----------TFNITktlK 226
Cdd:COG1009 286 ALFAALIALAQTDIKRVLAYSTVSQLGYMFLAL----GVGAYVAALFHLLThaffkALLFLgagsvihatgTRDIR---K 358
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 355342348 227 LSSMmtaWTKIPSLSATLMLALLSLAGLPPLTGFLPKWLIIQELTkqEMTSTATIMAFLSLLGLFF 292
Cdd:COG1009 359 MGGL---RKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAAL--EAGGLGPLLLAVALLGAFL 419
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-295 |
1.27e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 56.30 E-value: 1.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 13 LLLGTTITISSNHWAMAWTGLEINTLAILPLISKPHHPRAIEATTKYFLVQAAA------STLLLFSSTTNALFTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 87 TQLTHP----------ISCLLMTAAISIKLGLAPFHFWFPEVLQGSPLTTSLLLATAMKFPPITLLLLTSPSLNYT---- 152
Cdd:PRK08676 191 TELAAHasllspsvlgASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSgaae 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 153 ----LLTIMAISSAALGGWAGLNQTQTRKILAFSSISHLGWMTIIIIYNPKLTL--ITFYL--YCLMTAAIFLTFNITKT 224
Cdd:PRK08676 271 qfsnVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALfwMLFHMlaHSLVKSGLFFSAGILHR 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 355342348 225 LKLSSMMTAWTKI----PSLSATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLG---LFFYLR 295
Cdd:PRK08676 351 QYRSDRFDRIFDVfrlqPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAAssfAIFLLK 428
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-266 |
3.12e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 55.31 E-value: 3.12e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 110 PFHFWFPEVLQG-SPLTTSLLLATA--------MKFPPITLLLLTSPslnyTLLTIMAISSAALGGWAGLNQTQTRKILA 180
Cdd:PRK12647 213 PFHFWLPNAMEApTPVSAYLHSATMvkagiyllARLNPVLGGTPLWQ----TILPLFGGLTMLTGALLAVRQTDLKLILA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 181 FSSISHLGWMTIIIIYNPKLTLITFYLY----CLMTAAIFLTFNI----TKTLKLSSMMTAWTKIPSLSATLMLALLSLA 252
Cdd:PRK12647 289 YSTVSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIidheTGTRDITKLGGLRRAMPITAAAALLAALSMA 368
|
170
....*....|....
gi 355342348 253 GLPPLTGFLPKWLI 266
Cdd:PRK12647 369 GLPPLFGFLAKELI 382
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
87-263 |
6.38e-08 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 54.28 E-value: 6.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 87 TQLTHPISCLLMTAAISiKLGLAPFHFWFPEVLQGSPLTTSLLLATAM---------KFPPITLLLLTSPSlnytLLTIM 157
Cdd:PRK12650 204 PGLTTVVAVLIAVAAFT-KSAQFPFHFWLPEAMAAITPVSAFLHAAAVvkagiylllRFSPVFHDVAVWNW----LLIIV 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 158 AISSAALGGWAGLNQTQTRKILAFSSISHLGWM-TIIIIYNP-KLT--LITFYLYCLMTAAIFLTFNI----TKTLKLSS 229
Cdd:PRK12650 279 GMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIvATIGVGTPfALTaaVVHTLAHALFKSSLFMLIGVvdhqAGTRDIRR 358
|
170 180 190
....*....|....*....|....*....|....
gi 355342348 230 MMTAWTKIPSLSATLMLALLSLAGLPPLTGFLPK 263
Cdd:PRK12650 359 LGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
96-263 |
7.25e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 54.16 E-value: 7.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 96 LLMTAAISiKLGLAPFHFWFPEVLQGSPLTTSLLLATAM---------KFPPITLLLLTSpslnYTLLTIMAISSAALGG 166
Cdd:PRK12644 208 LILVGALS-KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPGFADVPVW----RPTVLVLGLATMLLGG 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 167 WAGLNQTQTRKILAFSSISHLGWMTIII-IYNPKLTLITFYLYC---LMTAAIFLTFNI------TKTL-KLSSMmtaWT 235
Cdd:PRK12644 283 WRALRQHDLKLILAYGTVSQLGFLTVLVgIGTRDAALAGLAMLLahaLFKAALFLVVGIidhstgTRDIrKLSGL---GR 359
|
170 180
....*....|....*....|....*...
gi 355342348 236 KIPSLSATLMLALLSLAGLPPLTGFLPK 263
Cdd:PRK12644 360 RQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-298 |
2.63e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 51.96 E-value: 2.63e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 34 EINTLAILPLISKPHHPRAIEATTKYFLVQAAASTLLLFSSTTNALFTGQWDITQ-----LTHPISCLLMTAAISIKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 109 A------PFHFWFPEVLQGSPLTTSLLLATAMKFPPITLLLLTSPSLN--------YTLLTIMAISSAALGGWAGLNQTQ 174
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIFKLFGglsyfpsaQGVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 175 TRKILAFSSISHLGWMTIIIIYNPKLTLITFYLYC----LMTAAIFLTFNI----TKTLKLSSMMTAWTKIPSLSATLML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAinhvIYKSALFLGAGIvsyrTKTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 355342348 247 ALLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLGLFFYLRLAY 298
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY 421
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
151-296 |
2.77e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 51.87 E-value: 2.77e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 151 YTLLTIMAISSAALGGWAGLNQTQTRKILAFSSISHLGWMTI-IIIYNPK-LTLITFYL--YCLMTAAIFL----TFNIT 222
Cdd:PRK07691 275 HYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVgVAMMTESgMIGAIYYLihDMIVKAALFLligiMIKIT 354
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 355342348 223 KTLKLSSMMTAWTKIPSLSATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLGLFFYLRL 296
Cdd:PRK07691 355 GTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-268 |
1.19e-06 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 49.93 E-value: 1.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 20 TISSNHWAMAWTGLEINTLAILPLISKPHHPRAIEATTKYFLV------QAAASTLLLFSSTTNALFTGQ----W-DITQ 88
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIIcsvgvaFALFGTILVYANAATVMGDGEmailWtELLK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 89 LTHPISCLLMTAAISI-------KLGLAPFHFWFPEVLQGSPLTTS-----LLLATA----MKFPPITLLLLTSPSLNyT 152
Cdd:PRK06458 204 HASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDAHSEAPSPVSallsgVLLNVAlyavLRYYILIDAAIGSDFPG-R 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 153 LLTIMAISSAALGGWAGLNQTQTRKILAFSSISHLGWMTIIIIYNPKLTLITFYLYCLM-----TAAIFLTFNITK---T 224
Cdd:PRK06458 283 LLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNhsltkSAIFFASGNVLQkygT 362
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 355342348 225 LKLSSMMTAWTKIPSLSATLMLALLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK06458 363 RDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
2.69e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 48.79 E-value: 2.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 33 LEINTLAILPLISKPHHPRAIEATTKYFLVQAAA------STLLLFSSTTNALFTGqwdiTQLTHPISCLLMTAAISIKL 106
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAmlfyliGAVLVYQANGTFAFSG----LATADPEAFALIALGLLVKG 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 107 GLAPFHFWFPEVLQGSPLTTSLLLATAMKFPPITLLLLTSPSLN--YTLLTIMAISSAALGGWAGLNQTQTRKILAFSSI 184
Cdd:PRK07234 199 GIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPglDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTI 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 185 SHLGWmtiiIIYNPKLTLITFYLYCLMTAAIFLTFNI----TKTLKLSSMMTAWTKIPslsatLMLALLSLAGLPPLTGF 260
Cdd:PRK07234 279 SQLGF----ILAAPLVGGLYALAHGLVKSTLFLCAGAlpsrNFTELISQMLGIGKWIP-----LTMASFSIAGFPLLAGF 349
|
250
....*....|.
gi 355342348 261 LPKWLIIQELT 271
Cdd:PRK07234 350 VSKVLTLKNLL 360
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-267 |
3.21e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 48.58 E-value: 3.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 33 LEINTLAILPLISKPHHPRAIEATTKYFLVQAAASTLLLFS-----STTNALFTGqwDITQLTHP--------ISCLLMT 99
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGigflyAITGTLNMG--DMFLIIQDlptnraiqIGVLFIM 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 100 AAISIKLGLAPFHFWFPEVLQGSPLTTSLLL---ATAMKFPPITLLLLTSPSLNYTLLT--------IMAISSAALGGWA 168
Cdd:PRK12662 217 VGLFIKAALFPFHKWLIQAYSEAPSFISVFFsgtSTKVMIYLIIRIVYDVFKANFVFTTlpfnnvfmILAALAIVFGSVL 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 169 GLNQTQTRKILAFSSISHLGWMTIIIIYNPKLTLITFYLY----CLMTAAIFLT-------FNITKTLKLSSMmtaWTKI 237
Cdd:PRK12662 297 AILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVsgsisyhFGTTKLEDCLNL---WKSM 373
|
250 260 270
....*....|....*....|....*....|
gi 355342348 238 PSLSATLMLALLSLAGLPPLTGFLPKWLII 267
Cdd:PRK12662 374 PKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-283 |
5.61e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 47.89 E-value: 5.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 11 LSLLLGTTITISSNHWAMaWTGLEINTLAILPLISKPHHPRAIEATTKYFLVQAAASTLL-------LFSSTTNALFTGQ 83
Cdd:PRK06589 124 LTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLflpavilIYTKTGNLDFVSG 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 84 WDITQLTHPISCLLMTAAIsIKLGLAPFHFWFPEVLQGSPLTTSLLLATAM----KFPPITLLLLTSPSLNYT------- 152
Cdd:PRK06589 203 GLFSKNQSIILLLMFIYGI-AKTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSYLQrifaefn 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 153 LLTIMAISSAALGGWAGLNQTQTRKILAFSSISHLGW--MTIIIIYNPKLTLITFYLYCLMTAAIFLTF------NITKT 224
Cdd:PRK06589 282 WLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLVSHSFAKICLFYsmgsiySLKKE 361
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 355342348 225 LKLSSMMTAWTKIPSLSATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIMA 283
Cdd:PRK06589 362 DQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVM 420
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-290 |
7.58e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 47.33 E-value: 7.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 55 ATTKYFLVQAAASTLLLFSSTTNALFTGQ--WDITQLTH---PISC-LLMTA----AISIKLGLAPFHFWFPEVLQGSPL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALeLLLYAgfliAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 125 TTSLLLA---------------------TAMKFPPItlllltspslnytlLTIMAISSAALGGWAGLNQTQTRKILAFSS 183
Cdd:PRK12561 218 PVSMILAgvllkmggyalirfnvqmlpdAHVYFAPA--------------LAILGVVNIIYGALNAFAQDNVKRRLAYSS 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 184 ISHLGWMTIII-------IYNPKLTLITfylYCLMTAAIFL----TFNITKTLKLSSMMTAWTKIPSLSAT-LMLALLSL 251
Cdd:PRK12561 284 VSHMGFVLLGIaaftdlgISGAMLQMIS---HGLIAAALFFltgvTYERTHTLSIPNMGGLAKVMPKTFALfTASSMASL 360
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 355342348 252 AgLPPLTGFLPKWLIIQELTKQEMTSTA--TIMAFLSLLGL 290
Cdd:PRK12561 361 A-LPGMSGFVSELTVFLGITSSDVYSSTfrTITILLAAVGL 400
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
92-268 |
9.88e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 47.26 E-value: 9.88e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 92 PISCLLMTAAI--SIKLGLapfHFWFPEVLQGSPLTTSLLLATAMKFPPITLLLLTSPSLNYTLLTIMAIS-----SAAL 164
Cdd:MTH00032 226 IIGILLLIGCIgkSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITifgalTAFF 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 165 GGWAGLNQTQTRKILAFSSISHLGWMTIIIIYNPKLTLITFYL--YCLMTAAIFLTFN------ITKTLKLSSMMTAWTK 236
Cdd:MTH00032 303 AATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHNVGLFHLvnHAFFKALLFLSAGsvihstTVDEQDMRKMGGLIHS 382
|
170 180 190
....*....|....*....|....*....|..
gi 355342348 237 IPSLSATLMLALLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 383 IPFTYTMMLIGSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
1.79e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 46.35 E-value: 1.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 50 PRAIEATTKYFLVQAAASTLLLFS----STTNALFTGQWDITQL-THPISCLLMT-------AAISIKLGLAPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIADLlNLPLPPGVQYwlflaffIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 118 VLQGSPLTTSLLLATAMK--------------FPPITLLLLtspslnyTLLTIMAISSAALGGWAGLNQTQTRKILAFSS 183
Cdd:PRK05846 237 AHVQAPTAGSVLLAGILLkmgaygllrfslplFPDASHEFA-------PIIITLGVIAIIYGALVALAQTDIKKLIAYSS 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 184 ISHLGWMTI-IIIYNPK-LTLITFYL--YCLMTAAIFLTFNI----TKTLKLSSMMTAWTKIPSLSATLMLALLSLAGLP 255
Cdd:PRK05846 310 ISHMGFVTLgIFAGNQLgIQGAIFQMisHGLSSAALFLLVGVlydrLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLP 389
|
250
....*....|..
gi 355342348 256 PLTGFLPKWLII 267
Cdd:PRK05846 390 GTSGFVGEFLIL 401
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-270 |
2.46e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 45.88 E-value: 2.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 59 YFLVQAAASTLLLFSSTTNALF-TGQWDITQLTHP-----ISCLLMTAAISIKLGLAPFHFWFPEVLQGSPLTTSLLLAT 132
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFIqTGSFELSPLGASagilsLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 133 AM------KFPPITLLLLTSPSLNYTLLTIMAISSAALGGWAGLNQTQTRKILAFSSISHLGwmtiIIIYNPKLTLItFY 206
Cdd:PRK08667 246 VMlkvavyGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIG----IILMGIGLYVI-FG 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 207 LYCLMT-------AAIFLTFN-----------------ITKTLKLSSMMTAWTKIPSLSATLMLALLSLAGLPPLTGFLP 262
Cdd:PRK08667 321 VYGLDTlallalgGALFHSLNhalfksllfltagsvvhATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFAS 400
|
....*...
gi 355342348 263 KWLIIQEL 270
Cdd:PRK08667 401 ELLLYESF 408
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
70-298 |
4.90e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 45.02 E-value: 4.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 70 LLFSSTTNALFTGQWDITQLTHPIS-----CLLMTAAISIKLGLAPFHFWFPEVLQG----SPLTTSLLLATAMKFPPIT 140
Cdd:MTH00209 148 LLILSIAWMLMHGNWNIFYLNFNSNlgsviSVLIVLAAMTKSAQIPFSAWLPAAMAAptpvSALVHSSTLVTAGVYLLIR 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 141 LLLLTSPSLNYT-LLTIMAISSAALGGWAGLNQTQTRKILAFSSISHLGWMTIIIIYN-PKLTLITFYLYCLMTAAIFLT 218
Cdd:MTH00209 228 FFPSLFSSPFFSmSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNqPELAFFHLITHALFKALLFIC 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 219 -----FNITKTLKLSSMMTAWTKIPSLSATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSL-LGLFF 292
Cdd:MTH00209 308 agniiHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTsLTAAY 387
|
....*.
gi 355342348 293 YLRLAY 298
Cdd:MTH00209 388 SMRLSY 393
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
152-298 |
6.75e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 44.56 E-value: 6.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 152 TLLTIMAISSAALGGWAGLNQTQTRKILAFSSISHLGWMTI-IIIYNPK-LTLITFYLYCLMT--AAIFLTFNITKTL-- 225
Cdd:PRK12663 273 PLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLgLALGTPAgINGAIFYLVHDMVvkTALFLIAGSLVRLtg 352
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 355342348 226 --KLSSMMTAWTKIPSLSATLMLALLSLAGLPPLTGFLPKWLIIQ-ELTKQEMTSTATIMA--FLSLLGLFFYLRLAY 298
Cdd:PRK12663 353 yrSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQgALDNGAYILLALMLItsLITMYSLFRIFFLAY 430
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
7-270 |
7.67e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 44.40 E-value: 7.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 7 LISTLSL-LLGTTITISSNHWAM---AWTGLEINTLAILPLISKPHHPRAIeattkyFLVQAAASTLLLFSSTTNALF-T 81
Cdd:PRK06459 74 LSSLYILtILGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 82 GQWDITQLTHPISCLLMTAAISIKLGLAPFHF--WFPEVLQGSPLTTSLLLATAMKFPPI-----TLLLLTSPSLNYTLL 154
Cdd:PRK06459 148 GTTNFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVygilkMTILTQTIPIGYFGL 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 155 TIMAIS--SAALGGWAGLNQTQTRKILAFSSISHLGWM-----TIIIIYNPKLTLITFYLYCLMTAAIFLT------FNI 221
Cdd:PRK06459 228 TILAIGafSILFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILYSFAHSvaktglFLS 307
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 355342348 222 TKTLKLSSMMTAWTKIPSLSAT-LMLALLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 308 SGLQEKQSITYSKKIRNRWIELgLTLLASSLSGLLPNIGGVASWLLLESL 357
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-319 |
1.38e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 43.60 E-value: 1.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 82 GQWDITQLTHPISCLLMTAAISI----KLGLAPFHFWFPEVLQG----SPLTTSLLLATAMKFPPITLLLLTSPSLNYT- 152
Cdd:MTH00207 165 GHWSITNMWQTDMNNYIALSIMIaamtKSAQMPFSSWLPAAMAAptpvSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNp 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 153 LLTIMAISSAALGGWAGLNQTQTRKILAFSSISHLG-WMTIIIIYNPKLTLITFYLYCLMTAAIFLTFNIT-----KTLK 226
Cdd:MTH00207 245 ALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGvMMASLGLGMPKLALFHLITHALFKALLFVCAGSLihshhHSQD 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 227 LSSMMTAWTKIPSLSATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLGLFFYLRLAYCATITLPP 306
Cdd:MTH00207 325 LRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPN 404
|
250
....*....|...
gi 355342348 307 NSNNYMKLWQTNK 319
Cdd:MTH00207 405 SSSPYHHLEDEDK 417
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-267 |
2.26e-04 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 42.65 E-value: 2.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 33 LEINTLAILPLISKPHHPRAIEATTKYFLVQAAAS------TLLLFSSTTNALFTGQWDITQLTHPISCLLMTAAISIKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSlglylaAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 107 GLAPFHFWFPEVLQGSPLTTSLLLATAMK------FPPITLLLLTSPSLNYTLLTIMAISSAALGGWAGLNQTQTRKILA 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVkvgvyiFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 181 FSSISHLGWMTIII---IYNPKLTLI--TFY---------LYCLMTAAIFLTFNITKTLKLSSMMtawTKIPSLSATLML 246
Cdd:PRK06525 302 YSTITQLGYMFFGLslaILGSRLALEgsIAYifnhafaksLFFLVAGALSYSCGTRLLPRLRGVL---KKLPLVGVGFCV 378
|
250 260
....*....|....*....|.
gi 355342348 247 ALLSLAGLPPLTGFLPKWLII 267
Cdd:PRK06525 379 AALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
1.31e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 40.58 E-value: 1.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 48 HHPRAIEATTKYFLVQAAASTLLLFSSTTNALFTGQWDITQLTHPISC--------LLMTAAISIKLGLA------PFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELienikghpLFLITLILIFIGAAaksaqgPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 114 WFPEVLQGSPLTTSLLLATAMKFPPITLLLLTSPSLNYT-----LLTIMAISSAALGGWAGLNQTQTRKILAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 189 WMTIIIIYNPK------LTLITFYL--YCLMTAAIFLTFNIT----KTLKLSSMMTAWTKIPSLSATLMLALLSLAGLPP 256
Cdd:PRK12649 316 YLMTMYGYTTYhepglgVAAATFHLlnHATFKACLFLVAGIVaheaATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
....*..
gi 355342348 257 LTGFLPK 263
Cdd:PRK12649 396 LNGFLSK 402
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-322 |
1.71e-03 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 36.08 E-value: 1.71e-03
10 20 30
....*....|....*....|....*....|..
gi 355342348 291 FFYLRLAYCATITLPPNSNNYMKLWQTNKPVN 322
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKN 32
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
60-268 |
1.84e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 40.08 E-value: 1.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 60 FLVQAAASTLLLFSSTTNALFTGQW--DITQLTHPISCLLMTAAISIKLGLAPFHFWFPEV-LQGSPLTTSLLLATAMK- 135
Cdd:PRK07363 171 LLVLAAFLGIVWLSGSTSFDYDAIStqNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAyTEASPAVAILLGGVLAKl 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 136 ------------FPPITLLLLTspslnyTLLTIMAISsAALGGWAGLNQTQTRKILAFSSISHLGWMTIIIIYNPKLTLI 203
Cdd:PRK07363 251 gtygllrfglqlFPQTWSLVAP------GLAIIGTIS-VIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLL 323
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 355342348 204 ----TFYLYCLMTAAIFLTFNI------TKTL-KLSSMMTAWTKIPSLSATLMLALLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07363 324 gavaQMISHGLILALLFHLVGIverkvgTRDLdVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
11-296 |
2.57e-03 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 39.36 E-value: 2.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 11 LSLLLGTTITISSNHWAMAWTGLEINTLAILPLISKPHHPRAIEATTKYFLVQAAASTLLLFSSTTNALFTGQWDITQLT 90
Cdd:PRK08377 115 LLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 91 HPISCLLMTAAI----SIKLGLA------PFHFWFPEVLQGSP----LTTSLLLATAMKFPPITLLLLTSPSLNYT---- 152
Cdd:PRK08377 195 QLAGTIDPTVAQvglaLLIFGLAveaelfPLNAWAPDAYQAAPhpitVMFSAFVVKAGLYAMARILYLMQNANGWSsvlk 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 153 LLTIMAISSAALGGWAGLNQTQTRKILAFSSISHLGWMTIIIIYNPKL----TLITFYLYCLMTAAIFLTFNIT----KT 224
Cdd:PRK08377 275 LVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdaGVFHMINHAIVKALLFLAVGYVgitlGG 354
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 355342348 225 LKLSSMMTAWTKIPSLSATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIMAFLSLLGLFFYLRL 296
Cdd:PRK08377 355 TEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
70-298 |
2.75e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 39.68 E-value: 2.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 70 LLFSSTTNALFTGqwDITQLTHPisCLLMTAAISIKLGLAPFHFWFPEVLQGSPLTTSLLLATAMKFPPITLLLLTSPSL 149
Cdd:MTH00020 192 LDFSSVFNMVVSA--PSSDITLI--CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLF 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 150 NYTLLTIMAIS-----SAALGGWAGLNQTQTRKILAFSSISHLGWMTIIIiynpKLTLITFYLYCLMTAAIF--LTF--- 219
Cdd:MTH00020 268 EQAPLALIIVTivgslTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVAC----GLSHYSISLFHLMNHAFFkaLLFlsa 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 220 -----NITKTLKLSSMMTAWTKIPSLSATLMLALLSLAGLPPLTGFLPKWLIIQELTKQE-MTSTATIMAFLSLLGLFFY 293
Cdd:MTH00020 344 gsvihALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYyLIFAYWLGCFSALLTAFYS 423
|
....*
gi 355342348 294 LRLAY 298
Cdd:MTH00020 424 IRLIY 428
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-272 |
3.04e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 39.35 E-value: 3.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 110 PFHFWFPEVLQG-SPLTTSLLLATAMK--------FPPITLLLLTSPSlnytLLTIMAISSAALGGWAGLNQTQTRKILA 180
Cdd:PRK12646 228 PFHIWLPRAMAApTPVSAYLHSATMVKagifllfrFTPLLGLSNMYIY----IVTFVGLITMLFGSITALKQWDLKGILA 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 181 FSSISHLGW-MTII-----IIYNPKLTLITFY-------LYCLMTAAIF---------LTFNITKTLKLSSMMTAWTKIP 238
Cdd:PRK12646 304 YSTISQLGMiMAMVgigggYAQHQQDAIASIYvfvlfaaLFHLMNHAIFkcalfmgvgIIDHEAGTRDIRILSGMRQLFP 383
|
170 180 190
....*....|....*....|....*....|....
gi 355342348 239 SLSATLMLALLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK12646 384 KMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-286 |
4.62e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 39.02 E-value: 4.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 110 PFHFWFPEVLQG-SPLTTSLLLATAMK--------FPPITLLlltspslnyTLLTIMAISSAAL-----GGWAGLNQTQT 175
Cdd:PRK12648 225 PFHFWLPHAMAApTPVSAYLHSATMVKagvfllarLWPVLAG---------TEEWFWIVGGAGLitlllGAYFALFQHDL 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355342348 176 RKILAFSSISHLGWMTIIIIYNPKLTLItfylyclmtAAIFLTFNiTKTLKLSSMMTA------------------WTKI 237
Cdd:PRK12648 296 KGLLAYSTISHLGLITLLLGLGSPLAAV---------AAIFHIIN-HATFKASLFMAAgiidhetgtrdmrrlsglRRLM 365
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 355342348 238 PsLSATL-MLALLSLAGLPPLTGFLPKWLIIQELTKQEMTST--------ATIMAFLS 286
Cdd:PRK12648 366 P-ITATLaMVAAAAMAGVPLLNGFLSKEMFFAETLDTHLLGSldwllpvaATLAGAFS 422
|
|
| |
