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Conserved domains on  [gi|333102290|gb|AEF14387|]
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NADH dehydrogenase subunit I, partial (mitochondrion) [Spalax graecus graecus]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009566)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-315 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177166  Cd Length: 318  Bit Score: 523.03  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   1 INVLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLAL 80
Cdd:MTH00104   4 INILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLAL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  81 SLWIPLPMPLPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFSLM 160
Cdd:MTH00104  84 TMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLS 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 161 SVMTSQEFTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTIIFM 240
Cdd:MTH00104 164 TLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFL 243

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 333102290 241 GAVYNPDSPELFTLNFTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISMPMSTASIPPYM 315
Cdd:MTH00104 244 GAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-315 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 523.03  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   1 INVLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLAL 80
Cdd:MTH00104   4 INILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLAL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  81 SLWIPLPMPLPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFSLM 160
Cdd:MTH00104  84 TMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLS 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 161 SVMTSQEFTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTIIFM 240
Cdd:MTH00104 164 TLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFL 243

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 333102290 241 GAVYNPDSPELFTLNFTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISMPMSTASIPPYM 315
Cdd:MTH00104 244 GAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
NADHdh pfam00146
NADH dehydrogenase;
3-300 3.78e-109

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 319.42  E-value: 3.78e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290    3 VLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLALSL 82
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   83 W--IPLPMPLPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFSLM 160
Cdd:pfam00146  82 FavIPFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  161 SVMTSQEFTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTIIFM 240
Cdd:pfam00146 162 EIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFL 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  241 GAvYNPDSPELFTLNFTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMW 300
Cdd:pfam00146 242 GG-WLGPFPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-296 6.34e-98

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 291.65  E-value: 6.34e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   1 INVLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLAL 80
Cdd:COG1005   13 IKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPAL 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  81 SLWIPLPM--PLPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFS 158
Cdd:COG1005   93 LAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLN 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 159 LMSVMTSQE-FTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTI 237
Cdd:COG1005  173 LSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATT 252

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 333102290 238 IFMGAVYNPDSPELFT-----LNFTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLA 296
Cdd:COG1005  253 LFLGGWLGPFPILPLGglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-315 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 523.03  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   1 INVLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLAL 80
Cdd:MTH00104   4 INILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLAL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  81 SLWIPLPMPLPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFSLM 160
Cdd:MTH00104  84 TMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLS 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 161 SVMTSQEFTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTIIFM 240
Cdd:MTH00104 164 TLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFL 243

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 333102290 241 GAVYNPDSPELFTLNFTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISMPMSTASIPPYM 315
Cdd:MTH00104 244 GAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-315 2.15e-177

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 493.26  E-value: 2.15e-177
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   1 INVLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLAL 80
Cdd:MTH00111   9 INPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLAL 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  81 SLWIPLPMPLPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFSLM 160
Cdd:MTH00111  89 TIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQ 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 161 SVMTSQEFTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTIIFM 240
Cdd:MTH00111 169 TLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFL 248

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 333102290 241 GAVYNPDSPELFTLNFTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISMPMSTASIPPYM 315
Cdd:MTH00111 249 NPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQL 323
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-313 8.88e-172

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 478.73  E-value: 8.88e-172
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   1 INVLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLAL 80
Cdd:MTH00071   9 INPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLAL 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  81 SLWIPLPMPLPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFSLM 160
Cdd:MTH00071  89 IIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLM 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 161 SVMTSQEFTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTIIFM 240
Cdd:MTH00071 169 NFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFL 248

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 333102290 241 GAVYNPDSPELFTLNFTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISMPMSTASIPP 313
Cdd:MTH00071 249 GSTYNHLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPP 321
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-315 3.12e-168

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 469.86  E-value: 3.12e-168
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   1 INVLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLAL 80
Cdd:MTH00134  10 INPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLAL 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  81 SLWIPLPMPLPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFSLM 160
Cdd:MTH00134  90 TLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQ 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 161 SVMTSQEFTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTIIFM 240
Cdd:MTH00134 170 TFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFL 249

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 333102290 241 GAVYNPDSPELFTLNFTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISMPMSTASIPPYM 315
Cdd:MTH00134 250 GASHIPTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPPQL 324
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 1-313 1.41e-138

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 394.28  E-value: 1.41e-138
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   1 INVLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLAL 80
Cdd:MTH00218   6 INLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLAL 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  81 SLWIPLPMPLPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFSLM 160
Cdd:MTH00218  86 LLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLE 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 161 SVMTSQEFTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTIIFM 240
Cdd:MTH00218 166 GFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFL 245

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 333102290 241 GAVYNpdspelfTLNFTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISMPMSTASIPP 313
Cdd:MTH00218 246 GTSLT-------TINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 1-313 2.42e-137

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 391.65  E-value: 2.42e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   1 INVLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLAL 80
Cdd:MTH00040   8 INLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLAL 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  81 SLWIPLPMPLPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFSLM 160
Cdd:MTH00040  88 LLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLS 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 161 SVMTSQEFTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTIIFM 240
Cdd:MTH00040 168 SISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFL 247

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 333102290 241 GAVyNPDSpELFTLN---FTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISMPMSTASIPP 313
Cdd:MTH00040 248 GGG-SPFN-EIFPINiiiVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 1-307 2.08e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 330.55  E-value: 2.08e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   1 INVLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLAL 80
Cdd:MTH00195   6 IHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALAL 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  81 SLWIPLPMPLPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFSLM 160
Cdd:MTH00195  86 ILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFT 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 161 SVMTSQEFTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTIIFM 240
Cdd:MTH00195 166 IMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFL 245

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 333102290 241 GAVYnpdspelfTLNFTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISMPMS 307
Cdd:MTH00195 246 GGGG--------TIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFA 304
NADHdh pfam00146
NADH dehydrogenase;
3-300 3.78e-109

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 319.42  E-value: 3.78e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290    3 VLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLALSL 82
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   83 W--IPLPMPLPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFSLM 160
Cdd:pfam00146  82 FavIPFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  161 SVMTSQEFTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTIIFM 240
Cdd:pfam00146 162 EIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFL 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  241 GAvYNPDSPELFTLNFTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMW 300
Cdd:pfam00146 242 GG-WLGPFPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-306 1.75e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 312.47  E-value: 1.75e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   1 INVLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLAL 80
Cdd:MTH00193   6 INFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSL 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  81 SLWIPLPMPLPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFSLM 160
Cdd:MTH00193  86 LIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLL 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 161 SVMTSQEFTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTIIFM 240
Cdd:MTH00193 166 DFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFL 245

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 333102290 241 GAvynpdspELFTLNFTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISMPM 306
Cdd:MTH00193 246 GG-------DLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKI 304
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 10-299 4.76e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 311.42  E-value: 4.76e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  10 ILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLALSLWIPLPMP 89
Cdd:MTH00143  14 VLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSY 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  90 LPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFSLMSVMTSQEFT 169
Cdd:MTH00143  94 FSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSV 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 170 WFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTIIFMGAVYNpdSP 249
Cdd:MTH00143 174 WLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSSV--LF 251

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 333102290 250 ELFTLNFTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCM 299
Cdd:MTH00143 252 LLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILV 301
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-306 3.76e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 309.27  E-value: 3.76e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   1 INVLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLAL 80
Cdd:MTH00225   5 LKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  81 SLWIPLPMPLPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFSLM 160
Cdd:MTH00225  85 ILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLF 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 161 SVMTSQEFTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTIIFM 240
Cdd:MTH00225 165 DFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFF 244

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 333102290 241 GAVYNpdspeLFTLNFTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISMPM 306
Cdd:MTH00225 245 GGFFV-----TIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 1-314 1.07e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 306.27  E-value: 1.07e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   1 INVLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLAL 80
Cdd:MTH00054   6 IKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAF 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  81 SLW--IPLPMPLPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFS 158
Cdd:MTH00054  86 IAWgvIPYGEGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLN 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 159 LMSVMTSQEFTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTII 238
Cdd:MTH00054 166 LTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVIL 245

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 333102290 239 FMGAVYNPDSPELFTLN---FTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISMPMSTASIPPY 314
Cdd:MTH00054 246 FLGGWLVISGPTSYFSNfvwFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPPF 324
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-313 7.21e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 299.34  E-value: 7.21e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   1 INVLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLAL 80
Cdd:MTH00216  10 IKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLAL 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  81 SLW--IPLPMPLPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFS 158
Cdd:MTH00216  90 IVWgvIPYERGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLS 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 159 LMSVMTSQ-EFTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTI 237
Cdd:MTH00216 170 ITEIVLAQnNGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTI 249

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 333102290 238 IFMGAVYNPdSPELFTLN--FTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISMPMSTASIPP 313
Cdd:MTH00216 250 LFLGGWLSP-IKYFKGGAgwFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFNGPPP 326
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-296 6.34e-98

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 291.65  E-value: 6.34e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   1 INVLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLAL 80
Cdd:COG1005   13 IKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPAL 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  81 SLWIPLPM--PLPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFS 158
Cdd:COG1005   93 LAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLN 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 159 LMSVMTSQE-FTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTI 237
Cdd:COG1005  173 LSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATT 252

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 333102290 238 IFMGAVYNPDSPELFT-----LNFTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLA 296
Cdd:COG1005  253 LFLGGWLGPFPILPLGglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-300 5.32e-94

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 281.31  E-value: 5.32e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   1 INVLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLAL 80
Cdd:PRK06076  14 LKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAF 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  81 SLWIPLPM--PLPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFS 158
Cdd:PRK06076  94 LAWAVIPFgpELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLN 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 159 LMSVMTSQEFTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTII 238
Cdd:PRK06076 174 LSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTL 253

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 333102290 239 FMG---AVYNPDSPELFTLNFTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMW 300
Cdd:PRK06076 254 FLGgwlPPFPLGGGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 1-308 1.63e-88

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 267.03  E-value: 1.63e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   1 INVLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLAL 80
Cdd:MTH00010   7 ISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILAL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  81 SLWIPLPMPLPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFSLM 160
Cdd:MTH00010  87 LLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFS 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 161 SVMTSQEFtWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTIIFM 240
Cdd:MTH00010 167 KIIMSQYS-WILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFT 245

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 333102290 241 GAVynpDSPELFTLNFTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMwhISMPMST 308
Cdd:MTH00010 246 SFI---PSIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLM--ISIPIMF 308
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 1-313 8.45e-82

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 251.09  E-value: 8.45e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   1 INVLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLAL 80
Cdd:MTH00029  11 IKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAI 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  81 SLWIPLPMP--LPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFS 158
Cdd:MTH00029  91 LAWAIVTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLN 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 159 LMSVMTSQEFTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTII 238
Cdd:MTH00029 171 ISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIF 250

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 239 FMGAVYNP-----DSPELF-----------TLNFTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHI 302
Cdd:MTH00029 251 FLGGWLSPldgipTPPEAFsifeqiassksSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTA 330

                        330
                 ....*....|.
gi 333102290 303 SMPMSTASIPP 313
Cdd:MTH00029 331 GILIGFNGVPP 341
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 2-299 5.03e-57

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 185.49  E-value: 5.03e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   2 NVLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLALS 81
Cdd:MTH00090   1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  82 LWIPLPMPLPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVtlaiiLLSILLLSGSFSLMS 161
Cdd:MTH00090  81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEI-----AFSLYLLSIMLHNNS 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 162 VMTSQEFTWFLLPAWplaFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTIIFmg 241
Cdd:MTH00090 156 FSFVSSFSLSLFVIY---LPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLF-- 230

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 333102290 242 avynpdspelFTLNFTLKTLMLTTMfLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCM 299
Cdd:MTH00090 231 ----------FKFSFLMLFLIFSLL-IFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLG 277
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 7-295 1.73e-44

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 153.54  E-value: 1.73e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   7 LLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKP-QTAS----------LTLFIVAPTLA 75
Cdd:MTH00058  11 LLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGfQSRSwfslfgvfllVLLVVFYCFIY 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  76 LTLALSLWIPLPMplpltnlnlgaLFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSG 155
Cdd:MTH00058  91 GSYYSGSYSSLSL-----------LWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYG 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 156 SFSLMSVMTSQEFTWFLLPawPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALS 235
Cdd:MTH00058 160 SYSLVDFYYSGWLSVLLFP--LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLG 237

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 236 TIIFMGavynpDSPELFTLNFTLktlmltTMFLWIRASYPRFRYDQLMHLLWKNFLPLTL 295
Cdd:MTH00058 238 SVLFFG-----GGFVSIMLLFHL------LFFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
ndhA CHL00032
NADH dehydrogenase subunit 1
 3-295 5.16e-44

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 153.95  E-value: 5.16e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   3 VLTLLLPILIAMAFLTLVERKTLGYMQLRKGPNMVGPYGILQPFADAMKLFIKEPLKPQTASLTLFIVAPTLALTLALSL 82
Cdd:CHL00032  33 ILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLS 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  83 W--IPLPMPLPLTNLNLGALFILATSSLSVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFSLM 160
Cdd:CHL00032 113 YlvIPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTV 192

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 161 SVMTSQE----FTWFLlpaW--PLAFM-WFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNA 233
Cdd:CHL00032 193 DIVEAQSkygfWGWNL---WrqPIGFIvFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL 269

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 234 LSTIIFMGAvYNPDSPELFTLNF---------------TLKTLMLTTMFLWI----RASYPRFRYDQLMHLLWKNFLPLT 294
Cdd:CHL00032 270 FVTVLYLGG-WNLSIPYIFIPELfeinktggvfgttigIFITLAKTYLFLFIsittRWTLPRLRMDQLLNLGWKFLLPIS 348


                 .
gi 333102290 295 L 295
Cdd:CHL00032 349 L 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
3-300 2.32e-21

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 91.78  E-value: 2.32e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290   3 VLTLLLPILIAMaFLTLVERKTLGYMQLRKGPnmvgpyGILQPFADAMKLFIKEPLKPQTASLtLFIVAPTLALTLALSL 82
Cdd:COG0650    8 LLQLLLALLLAP-LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASW-LFRAAPYVALAAMLLA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290  83 WIPLPMPLPLTNLNLGALFILATSSLSVYSIL--WSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSILLLSGSFSLM 160
Cdd:COG0650   80 ALLVPVLTTGPPLSFSGDLIVLVYLLALARFFlaLAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLS 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333102290 161 SVMTSQE---FTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTI 237
Cdd:COG0650  160 DIVAYQAahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVN 239

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 333102290 238 IFMGAVYNPDSPeLFTLNFTLKTLMLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMW 300
Cdd:COG0650  240 LFLPWGIALTLL-LALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLA 301
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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