|
Name |
Accession |
Description |
Interval |
E-value |
| PRK06854 |
PRK06854 |
adenylyl-sulfate reductase subunit alpha; |
1-559 |
0e+00 |
|
adenylyl-sulfate reductase subunit alpha;
Pssm-ID: 235879 [Multi-domain] Cd Length: 608 Bit Score: 874.25 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 1 MELSHDILKTDLLIVGGGTAGCFAAISAANK-PSIHILIVEKFNIKRSGCLAAGVNALNAYITKNETPESFVDYVKKEFN 79
Cdd:PRK06854 3 ANPEVVEVDTDILIIGGGMAGCGAAFEAKEWaPDLKVLIVEKANIKRSGAVAQGLSAINAYIGEGETPEDYVRYVRKDLM 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 80 EVVREDLIYTAAKRLNRVTEKVEKMGLTILKNEAGEYVSRGKRSIKINGENIKPILVDALKKKENIEVLNGVNIVDYIVR 159
Cdd:PRK06854 83 GIVREDLVYDIARHVDSVVHLFEEWGLPIWKDENGKYVRRGRWQIMINGESYKPIVAEAAKKALGDNVLNRVFITDLLVD 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 160 DGKVIGAFGFSVKEAKVYIIYAKAVICATGGAAGIYKPNNPGFSRHKMWYSPFNTGAGYAMGIRAGAEMTTFEMRFIALR 239
Cdd:PRK06854 163 DNRIAGAVGFSVRENKFYVFKAKAVIVATGGAAGIYRPRSPGEGRGRMWYPPFNTGSGYAMGIRAGAEMTTFENRFIPLR 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 240 CKDTIAPTGTIAQGIKTPQVNAFGEKYVTR-------------YGKPTTINRLYSTIMENLNGNGPCYLKTEGI--EESQ 304
Cdd:PRK06854 243 FKDGYGPVGAWFLLFKAKAVNALGEEYEAKnaaelkkyvpyadYKPIPTCLRNYATVEENKAGRGPIYMDTEEAlqDKHL 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 305 VQDLFKAYLNMAPAQALKWFDRDINPSKQNIEIEGTEPYIVGGH-GASGYWVD-------------TRRKTTLDGLYAAG 370
Cdd:PRK06854 323 ESELWEDFLDMTPGQALLWAAQNIEPEEENSEIMGTEPYIVGSHsGASGYWVSgpedwvpeeykwgYNRMTTVEGLFAAG 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 371 DVSGGSPKKYVTGCFAEGEIAAENAIEYISN--KHLNTITDDEIDEIIHRIKDFFDGKSDFK--------------IEQI 434
Cdd:PRK06854 403 DVVGGSPHKFSSGSFAEGRIAAKAAVRYILDnkDEKPEIDDDQIEELKKEIYAPLERYEEFKdystdpdvnpnyisPEQL 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 435 EEAMQKVMDEYAGGISQHYRYTEEKLNIAEKRIEELLKLSYKLKAKGSHELLFIFELIDRLYVAKVVIAHLKARRETRWK 514
Cdd:PRK06854 483 EERLQKIMDEYAGGISTNYTTNEKLLEIALELLEMLEEDSEKLAARDLHELMRCWELKHRLLVAEAHIRHLLFRKETRWP 562
|
570 580 590 600
....*....|....*....|....*....|....*....|....*
gi 325507512 515 CYEENESYTARDDENFLKYVNSIYKEGKVNILYRNLVGRNEIYEH 559
Cdd:PRK06854 563 GYYERADYPGKDDENWKCFVNSRYDPGTGEWTIRKLPYYQIIPEH 607
|
|
| PRK08275 |
PRK08275 |
putative oxidoreductase; Provisional |
1-535 |
3.80e-65 |
|
putative oxidoreductase; Provisional
Pssm-ID: 181346 [Multi-domain] Cd Length: 554 Bit Score: 221.85 E-value: 3.80e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 1 MELSHDILKTDLLIVGGGTAGCFAAISAANK-PSIHILIVEKFNIKRSGCLAAGVNALN-AYITKNETPESFVDYVKKEF 78
Cdd:PRK08275 1 DAMNTQEVETDILVIGGGTAGPMAAIKAKERnPALRVLLLEKANVKRSGAISMGMDGLNnAVIPGHATPEQYTKEITIAN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 79 NEVVREDLIYTAAKRLNRVTEKVEKMGLTILKNEAGEYVSR-----GKRSIKI-NGENIKPILVDALKKKenievlnGVN 152
Cdd:PRK08275 81 DGIVDQKAVYAYAEHSFETIQQLDRWGVKFEKDETGDYAVKkvhhmGSYVLPMpEGHDIKKVLYRQLKRA-------RVL 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 153 IVDYIV-------RDGKVIGAFGFSVKEAKVYIIYAKAVICATGgAAGIYKPNNPGFsRHKMWYSPFNTGAGYAMGIRAG 225
Cdd:PRK08275 154 ITNRIMatrlltdADGRVAGALGFDCRTGEFLVIRAKAVILCCG-AAGRLGLPASGY-LFGTYENPTNAGDGYAMAYHAG 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 226 AEMTTFEMRFIALRCKDTIAPT-GTIAQGIKTPQVNAFGEKYVTRYgkpttinrLYSTIM------ENLNGNGPCYLKTE 298
Cdd:PRK08275 232 AELANLECFQINPLIKDYNGPAcAYVTGPLGGYTANAKGERFIECD--------YWSGQMmwefyqELQSGNGPVFLKLD 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 299 GIEESQVQD----LFKaylNMAPAQALKWFDRDINPSKQNIEIEGTEPYIVGGHGASGYWVDTRRKTTLDGLYAAGDVsG 374
Cdd:PRK08275 304 HLAEETIQTietiLHT---NERPSRGRFHEGRGTDYRQQMVEMHISEIGFCSGHSASGVWVNEKAETTVPGLYAAGDM-A 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 375 GSPKKYVTGCFAEGEIAAENAIEYISNKHLNTITDDEIDEIIHRIKDFFDGKSDFKIEQIEEAMQKVMDEYAggisQHYR 454
Cdd:PRK08275 380 SVPHNYMLGAFTYGWFAGENAAEYVAGRDLPEVDAAQVEAERARVLAPLHREDGLPPAQVEYKLRRLVNDYL----QPPK 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 455 YTeEKLNIAEKRIEELLKLSYKLKAKGSHELLFIFELIDRLYVAKVVIAHLKARRETRWKCYEENESYTARDDENFLKYV 534
Cdd:PRK08275 456 VT-RKMEIGLQRFAEIREDLERIKARDPHELMRALEVSSIRDCAEMAARASLFRTESRWGLYHYRVDFPERNDAEWFCHT 534
|
.
gi 325507512 535 N 535
Cdd:PRK08275 535 H 535
|
|
| PRK13800 |
PRK13800 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
8-535 |
7.43e-52 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 237512 [Multi-domain] Cd Length: 897 Bit Score: 190.45 E-value: 7.43e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 8 LKTDLLIVGGGTAGCFAAISAANKPSiHILIVEKFNIKRSGCLAAGVNALN-AYITKNETPESFVDYVKKEFNEVVREDL 86
Cdd:PRK13800 12 LDCDVLVIGGGTAGTMAALTAAEHGA-NVLLLEKAHVRHSGALAMGMDGVNnAVIPGKAEPEDYVAEITRANDGIVNQRT 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 87 IYTAAKRLNRVTEKVEKMGLTILKNEAGEY-VSRGKRSIKI-----NGENIKPILVDALKKKEN---IEVLNGVNIVDYI 157
Cdd:PRK13800 91 VYQTATRGFAMVQRLERYGVKFEKDEHGEYaVRRVHRSGSYvlpmpEGKDVKKALYRVLRQRSMrerIRIENRLMPVRVL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 158 VRDGKVIGAFGFSVKEAKVYIIYAKAVICATGGAAGIYKPNNpGFsRHKMWYSPFNTGAGYAMGIRAGAEMTTFEMRFIA 237
Cdd:PRK13800 171 TEGGRAVGAAALNTRTGEFVTVGAKAVILATGPCGRLGLPAS-GY-LYGTYENPTNAGDGYSMAYHAGAELSGIECFQIN 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 238 LRCKDTIAPT-GTIAQGIKTPQVNAFGEKYV-TRYGKPTTINRLYSTIMenlNGNGPCYLKTEGIEESQVQDLfKAYLNM 315
Cdd:PRK13800 249 PLIKDYNGPAcAYVANPFGGYQVNAQGERFVdSDYWSGQMMAEVKREIE---SARGPIYLKVSHLPEETLSAL-ESILHT 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 316 A--PAQALKWFDRDINPSKQNIEIEGTEPYIVGGHGASGYWVDTRRKTTLDGLYAAGDVSgGSPKKYVTGCFAEGEIAAE 393
Cdd:PRK13800 325 TerPTRGTFHANRGHDYRTHDIEMHISEIGLCSGHSASGVWVDEHARTTVPGLYAAGDLA-CVPHNYMIGAFVFGDLAGA 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 394 NAIEYISNKHLNT-ITDDEI---DEIIHRIKDFFDGKSDfkiEQIEEAMQKVMDEYAGGISqhyryTEEKLNIAEKRIEE 469
Cdd:PRK13800 404 HAAGTLAEVPAPGeLPADQLaeaHELIYRPLRHPDGPPQ---PQVEYKLRRFVNDYVAPPK-----TAAKLSIAVETFER 475
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 325507512 470 LLKLSYKLKAKGSHELLFIFELIDRLYVAKVVIAHLKARRETRWKCYEENESYTARDDENFLKYVN 535
Cdd:PRK13800 476 MAAEIAGMGARTPHELMRCAEVSFIRDCAEMAARSSLTRTESRWGLYHDRADLPERDDASWGYHLN 541
|
|
| sdhA |
PRK06263 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
7-530 |
1.40e-39 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 235758 [Multi-domain] Cd Length: 543 Bit Score: 151.67 E-value: 1.40e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 7 ILKTDLLIVGGGTAGCFAAISAanKPSIHILIVEKFNIKRSGC--LAAGvnALNAYITKNETPES-FVDYVKK-EF--NE 80
Cdd:PRK06263 5 IMITDVLIIGSGGAGARAAIEA--ERGKNVVIVSKGLFGKSGCtvMAEG--GYNAVLNPEDSFEKhFEDTMKGgAYlnDP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 81 VVREDLIYTAAKRLNrvteKVEKMGLTILKNEAGEYVSR-------------GKRSikinGENIKPILVDALKKkENIEV 147
Cdd:PRK06263 81 KLVEILVKEAPKRLK----DLEKFGALFDRTEDGEIAQRpfggqsfnrtcyaGDRT----GHEMMMGLMEYLIK-ERIKI 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 148 LNGVNIVDYIVRDGK-VIGAFGFSVKEAKVYIIYAKAVICATGGAAGIYK-PNNPgfsRHKmwyspfnTGAGYAMGIRAG 225
Cdd:PRK06263 152 LEEVMAIKLIVDENReVIGAIFLDLRNGEIFPIYAKATILATGGAGQLYPiTSNP---IQK-------TGDGFAIAYRAG 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 226 AEMTTFEM-RFialrckdtiAPTGTI----AQGI-KTPQV--------NAFGEKYVTRYGKP-------TTINR-LYSTI 283
Cdd:PRK06263 222 AELIDMEMvQF---------HPTGMVypysGRGIlVTEAVrgeggilyNKNGERFMKRYDPErmelstrDVVARaIYTEI 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 284 ME-NLNGNGPCY-----LKTEGIEEsQVQDLFKAYLNmapaqalkwFDRDINpsKQNIEIEGTEPYIVGghgasGYWVDT 357
Cdd:PRK06263 293 QEgRGTNHGGVYldvthLPDEVIEE-KLETMLEQFLD---------VGVDIR--KEPMEVAPTAHHFMG-----GIRINE 355
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 358 RRKTTLDGLYAAGDVSGGspkkyVTG-------CFAE----GEIAAENAIEYISNKHLNTITDDeIDEIIHRIKDFFDG- 425
Cdd:PRK06263 356 DCETNIPGLFACGEVAGG-----VHGanrlggnALADtqvfGAIAGKSAAKNAENNEFKKVNRS-VEEDIARIKSEIKFl 429
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 426 KSDFKIEQIEEAMQKVMDEYAgGISQhyryTEEKLNIAEKRIEELLKLSYKLKAKGSHELLFIFELIDRLYVAKVVIAHL 505
Cdd:PRK06263 430 NGSINPYDLIDELKKTMWDYV-SIVR----NEKGLKKALEEINELKEKLKDLKVNGIVDFNKALELENMILVAELVIKSA 504
|
570 580
....*....|....*....|....*
gi 325507512 506 KARRETRWKCYEENesYTARDDENF 530
Cdd:PRK06263 505 LLRKESRGAHYRED--YPETNDEWF 527
|
|
| sdhA |
PRK06069 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
6-547 |
2.85e-31 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 235689 [Multi-domain] Cd Length: 577 Bit Score: 127.87 E-value: 2.85e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 6 DILKTDLLIVGGGTAGCFAAISAA--NKPSIHILIVEKFNIKRSGCLAA-GVNALNAYITKNETPESFV-DYVK-KEFne 80
Cdd:PRK06069 2 EVLKYDVVIVGSGLAGLRAAVAAAerSGGKLSVAVVSKTQPMRSHSVSAeGGTAAVLYPEKGDSFDLHAyDTVKgSDF-- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 81 VVREDLIYTAAKRLNRVTEKVEKMGLTILKNEAGEYVSR--GKRSIK-------INGENIKPILVDALKKKENIEVLNGV 151
Cdd:PRK06069 80 LADQDAVEVFVREAPEEIRFLDHWGVPWSRRPDGRISQRpfGGMSFPrttfaadKTGFYIMHTLYSRALRFDNIHFYDEH 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 152 NIVDYIVRDGKVIGAFGFSVKEAKVYIIYAKAVICATGGAAGIYkpnnpGFSRhkmwYSPFNTGAGYAMGIRAGAEMTtf 231
Cdd:PRK06069 160 FVTSLIVENGVFKGVTAIDLKRGEFKVFQAKAGIIATGGAGRLY-----GFTT----YAHSVTGDGLAIAYRAGIPLK-- 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 232 EMRFIALRckdtiaPTGTIAQGIKTPQ---------VNAFGEKYVTRYG------KPTTI--NRLYSTIMEN---LNGNG 291
Cdd:PRK06069 229 DMEFVQFH------PTGLVPSGILITEaargeggylINKEGERFMKRYApqkmelAPRDVvsRAIMTEIMEGrgfKHESG 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 292 PCY-------LKTEGIEES--QVQDLFKAYLNmapaqalkwfdrdINPSKQNIEIEGTEPYIVGG-HGASGYWVDTRRKT 361
Cdd:PRK06069 303 LCYvgldlrhLGEEKINERlpLIREIAKKYAG-------------IDPVTEPIPVRPAAHYTMGGiHTDVYGRVLTADGE 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 362 TLDGLYAAGDVSGGSpkkyVTG-----------CFAEGEIAAENAIEYISNKHLNTITDDEI---------DEIIHRikd 421
Cdd:PRK06069 370 WVRGLWAAGEAAAVS----VHGanrlgsnstaeCLVWGRIAGEQAAEYALKRPAPSSPVEKLaekeekrifDKLLKK--- 442
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 422 ffdgKSDFKIEQIEEAMQKVMDEYAgGISQHYRYTEEKLNIAEKRIEELLKLSYKLKAKG-SHELLFIFELIDRLYVAKV 500
Cdd:PRK06069 443 ----EGGEPSYEIRRELNDIMDKNF-GIFRDESGLAEALKKIKKLRERYKNVRIEDKSRIyNTDLKDALELDGMLDLAEV 517
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 325507512 501 VIAHLKARRETRWKCYEENesYTARDDENFLKYVNSIYKEGKVNILY 547
Cdd:PRK06069 518 VAIGALLRTESRGAHYRLD--YPKRDDENWLKHTLAYYTGGGPKVTY 562
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
6-512 |
2.11e-29 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 121.75 E-value: 2.11e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 6 DILKTDLLIVGGGTAGCFAAISAAnkPSIHILIVEKFNIKRSG-CLAAGvnALNAYITKNETPESFV-----------DY 73
Cdd:COG0029 1 ERLKTDVLVIGSGIAGLSAALKLA--ERGRVTLLTKGELGESNtRWAQG--GIAAVLDPGDSPELHIadtlaagaglcDP 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 74 vkkefnEVVREdLIYTAAKRLnrvtEKVEKMGLTILKNEAGEYV-------SRgKRSIKIN---GENIKPILVDALKKKE 143
Cdd:COG0029 77 ------EAVRV-LVEEGPERI----RELIELGVPFDRDEDGELAltregghSR-RRILHAGdatGREIERALLEAVRAHP 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 144 NIEVLNGVNIVDYIV-RDGKVIGAFGFSVKEAKVYIIYAKAVICATGGAAGIYKPN-NPgfsrhkmwysPFNTGAGYAMG 221
Cdd:COG0029 145 NITVLENHFAVDLITdADGRCVGAYVLDEKTGEVETIRAKAVVLATGGAGQLYAYTtNP----------DVATGDGIAMA 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 222 IRAGAEMTtfEMRFI-----ALRCKDtiAPTGTI-------------AQGiktpqvNAFGEKY-----------VTRygk 272
Cdd:COG0029 215 YRAGARLA--DMEFVqfhptALYHPG--APSFLIseavrgegavlrnADG------ERFMPDYhpraelaprdvVAR--- 281
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 273 pttinRLYSTIMEnlNGNGPCYLKTEGIEESQVQDLFkaylnmaP--AQALKwfDRDINPSKQNIEIEGTEPYIVGghga 350
Cdd:COG0029 282 -----AIDAEMKK--TGGDCVYLDISHLDAEFIRERF-------PtiYARCL--ELGIDITKEPIPVAPAAHYTMG---- 341
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 351 sGYWVDTRRKTTLDGLYAAGDVSGgspkkyvTG--------------CFAEGEIAAENAIEYISNKHLNtITDDEIDEii 416
Cdd:COG0029 342 -GVATDLDGRTSIPGLYAVGEVAC-------TGvhganrlasnslleGLVFGRRAAEDIAARLAESPLP-PEIPEWDE-- 410
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 417 hrikDFFDGKSDFKIEQIEEAMQKVMDEYAgGISqhyRyTEEKLNIAEKRIEELLKLSYKLK-AKGSHELLfifELIDRL 495
Cdd:COG0029 411 ----SVTDPDEEVLIAHLRDELRRLMWDYV-GIV---R-TAKGLERALRRLELLREEIEEYAnFRVSRDLL---ELRNLL 478
|
570
....*....|....*..
gi 325507512 496 YVAKVVIAHLKARRETR 512
Cdd:COG0029 479 LVAELIVRAALARKESR 495
|
|
| PRK09231 |
PRK09231 |
fumarate reductase flavoprotein subunit; Validated |
6-542 |
5.88e-26 |
|
fumarate reductase flavoprotein subunit; Validated
Pssm-ID: 236421 [Multi-domain] Cd Length: 582 Bit Score: 112.03 E-value: 5.88e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 6 DILKTDLLIVGGGTAGCFAAISAA-NKPSIHILIVEKFNIKRSGCLAAGVNAlnAYITKNEtpesfvDYVKKEFNEVV-- 82
Cdd:PRK09231 1 QTFQADLAIIGAGGAGLRAAIAAAeANPNLKIALISKVYPMRSHTVAAEGGS--AAVAQDH------DSFDYHFHDTVag 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 83 -----REDLIYTAAKRLNRVTEKVEKMGLTILKNEAGEYVSRGKRSIKI---------NGENIKPILVDALKKKENIEVL 148
Cdd:PRK09231 73 gdwlcEQDVVEYFVHHCPTEMTQLEQWGCPWSRKPDGSVNVRRFGGMKIertwfaadkTGFHMLHTLFQTSLKYPQIQRF 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 149 NGVNIVDYIVRDGKVIGAFGFSVKEAKVYIIYAKAVICATGGAAGIYKPN-NPGFSrhkmwyspfnTGAGYAMGIRAGAE 227
Cdd:PRK09231 153 DEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNtNGGIV----------TGDGMGMAYRHGVP 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 228 MTtfEMRFIALRckdtiaPTGTIAQGIKTPQ---------VNAFGEKYVTRY--GKPTTINRLYSTIME----------- 285
Cdd:PRK09231 223 LR--DMEFVQYH------PTGLPGSGILMTEgcrgeggilVNKDGYRYLQDYglGPETPLGEPKNKYMElgprdkvsqaf 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 286 ---NLNGN------GPC------YLKTEGIEES--QVQDLFKAYLNmapaqalkwfdrdINPSKQNIEIEGTEPYIVGGh 348
Cdd:PRK09231 295 wheWRKGNtistprGDVvyldlrHLGEKKLHERlpFICELAKAYVG-------------VDPVKEPIPVRPTAHYTMGG- 360
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 349 gasgYWVDTRRKTTLDGLYAAGDVSG---------GS---PKKYVTGCFAeGEIAAENAIEYisnKHLN-TITDDEIDEI 415
Cdd:PRK09231 361 ----IETDQNCETRIKGLFAVGECSSvglhganrlGSnslAELVVFGRVA-GEQAAERAATA---GPGNeAALDAQAADV 432
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 416 IHRIKDFFDGKSDFKIEQIEEAMQKVMDEyAGGIsqhYRyTEEKLNIAEKRIEELlKLSYK---LKAKGS---HELLFIF 489
Cdd:PRK09231 433 EQRLKALVNQEGGENWAKIRDEMGLSMEE-GCGI---YR-TPELMQKTIDKLAEL-KERFKrvrITDTSSvfnTDLLYTI 506
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 325507512 490 ELIDRLYVAKVVIAHLKARRETRWKCYEENESYTARDDENFLKYVNSIYKEGK 542
Cdd:PRK09231 507 ELGYGLDVAECMAHSALARKESRGAHQRLDEGCTERDDVNFLKHTLAFYNADG 559
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
9-401 |
1.71e-25 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 109.15 E-value: 1.71e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 9 KTDLLIVGGGTAGCFAAISAANKpSIHILIVEKFNIKRSGCLAA--GVNALNAYITKNE---TPESFVDYVKKEFNEVVR 83
Cdd:COG1053 3 EYDVVVVGSGGAGLRAALEAAEA-GLKVLVLEKVPPRGGHTAAAqgGINAAGTNVQKAAgedSPEEHFYDTVKGGDGLAD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 84 EDLIYTAAKRLNRVTEKVEKMGLTILKNEAGEYVSRG----KRSIkINGENIKPILVDALKK---KENIEVLNGVNIVDY 156
Cdd:COG1053 82 QDLVEALAEEAPEAIDWLEAQGVPFSRTPDGRLPQFGghsvGRTC-YAGDGTGHALLATLYQaalRLGVEIFTETEVLDL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 157 IVRDGKVIGAFGFSvKEAKVYIIYAKAVICATGGAAGIY---KPNNPGFSRHKMWYSPFNTGAGYAMGIRAGAEMTTFEM 233
Cdd:COG1053 161 IVDDGRVVGVVARD-RTGEIVRIRAKAVVLATGGFGRNYemrAEYLPEAEGALSTNAPGNTGDGIAMALRAGAALADMEF 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 234 RFialrckdtIAPTGTIAQGIKTP----------QVNAFGEKYVTRYGkPTTInrlYSTIMENLNGnGPCYLktegIEES 303
Cdd:COG1053 240 VQ--------FHPTGLPGDGGLISegargkpggiLVNKEGERFMNEYA-PRDV---VSRAILEEID-EPAYL----VLDL 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 304 QVQDLFKAYLNMA-----------------PAQALKWFDRDINPS-KQNIEIEGTE-------PY----IVGG-HGAS-G 352
Cdd:COG1053 303 RHRRRLEEYLEAGylvkadtieelaaklgiDAAELAATVARYNAAaKAGVDPRGTClgpikegPFyaipVRPGvHYTMgG 382
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 325507512 353 YWVDTR------RKTTLDGLYAAGDVSGGspkkyVTG-----------CFAEGEIAAENAIEYISN 401
Cdd:COG1053 383 LRVDADarvldaDGTPIPGLYAAGEAAGS-----VHGanrlggnslgdALVFGRIAGRHAAEYAKA 443
|
|
| sdhA |
PRK05945 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
7-551 |
3.39e-20 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 180319 [Multi-domain] Cd Length: 575 Bit Score: 94.03 E-value: 3.39e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 7 ILKTDLLIVGGGTAGCFAAISAANK-PSIHILIVEKFNIKRSGCLAA--GVNALNAYITKNETPESFV-DYVKKEfNEVV 82
Cdd:PRK05945 1 MLEHDVVIVGGGLAGCRAALEIKRLdPSLDVAVVAKTHPIRSHSVAAqgGIAASLKNVDPEDSWEAHAfDTVKGS-DYLA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 83 REDLIYTAAKRLNRVTEKVEKMGLTILKNEAGEYVSR--GKRSIK-------INGENIKPILVDALKKkenievlNGVNI 153
Cdd:PRK05945 80 DQDAVAILTQEAPDVIIDLEHLGVLFSRLPDGRIAQRafGGHSHNrtcyaadKTGHAILHELVNNLRR-------YGVTI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 154 VD------YIVRDGKVIGAFGFSVKEAKVYIIYAKAVICATGGAAGIYKPNNPGFSrhkmwyspfNTGAGYAMGIRAGAE 227
Cdd:PRK05945 153 YDewyvmrLILEDNQAKGVVMYHIADGRLEVVRAKAVMFATGGYGRVFNTTSNDYA---------STGDGLAMTAIAGLP 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 228 MTtfEMRFIALRckdtiaPTGTIAQGIKTPQ---------VNAFGEKYVTRYG------KPTTI-NRLYSTIME-----N 286
Cdd:PRK05945 224 LE--DMEFVQFH------PTGLYPVGVLISEavrgegaylINSEGDRFMADYApsrmelAPRDItSRAITLEIRagrgiN 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 287 LNGN--GPC-YLKTEGIEESQVqdlfkayLNMAP-----AQALKWFDRDINPskqnIEIEGTEPYIVGGHGASgywVDTR 358
Cdd:PRK05945 296 PDGSagGPFvYLDLRHMGKEKI-------MSRVPfcweeAHRLVGVDAVTEP----MPVRPTVHYCMGGIPVN---TDGR 361
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 359 RK----TTLDGLYAAGDVSGGSpkkyVTG-----------CFAEGEIAAENAIEYISNKHLNTITDDE-IDEIIHRIKDF 422
Cdd:PRK05945 362 VRrsadGLVEGFFAAGECACVS----VHGanrlgsnslleCVVYGRRTGAAIAEYVQGRKLPEVDEQRyLKEAKQRIQAL 437
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 423 FDGKSDFKIEQIEEAMQKVMDEYAGgisqHYRyTEEKLNIAEKRIEELlKLSY---KLKAKGSH---ELLFIFELIDRLY 496
Cdd:PRK05945 438 LDQSGTYRINQLRQQFQDCMTDHCG----VFR-TEEIMQEGLEKIQQL-KQQYeqiYLDDKGKCwntELIEALELRSLMV 511
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*
gi 325507512 497 VAKVVIAHLKARRETRWKCYEENesYTARDDENFLKYVNSIYKEGKVNILYRNLV 551
Cdd:PRK05945 512 VGEIILTSALNRQESRGAHSRED--YPQRDDQNFLKHTLAYYSPAGIDIQYMPVV 564
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
11-376 |
6.81e-18 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 85.80 E-value: 6.81e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 11 DLLIVGGGTAGCFAAISAANKPsIHILIVEKFNIKRsGCLAAGVNALNAYITKN----ETPESFVDYVKKEFNEVVREDL 86
Cdd:pfam00890 1 DVLVIGGGLAGLAAALAAAEAG-LKVAVVEKGQPFG-GATAWSSGGIDALGNPPqggiDSPELHPTDTLKGLDELADHPY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 87 IYTAakrLNRVTEKV---EKMGLTILKNEAGEYVSRG----------------KRSIKINGENIKPILVDALKKKEnIEV 147
Cdd:pfam00890 79 VEAF---VEAAPEAVdwlEALGVPFSRTEDGHLDLRPlgglsatwrtphdaadRRRGLGTGHALLARLLEGLRKAG-VDF 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 148 LNGVNIVDYIVRDGKVIGAFGFSVKEAKVYIIYAK-AVICATGGAAGIYKPNNPGFSRHKMWYSPFNTGAGYAMGIRAGA 226
Cdd:pfam00890 155 QPRTAADDLIVEDGRVTGAVVENRRNGREVRIRAIaAVLLATGGFGRLAELLLPAAGYADTTNPPANTGDGLALALRAGA 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 227 EMTTFEMRFIAL--RCKDTIA-PTGTIAQGIKTP---QVNAFGEKYVTRYGKPTTINRLYSTIMENLNGNGPCYLKTEG- 299
Cdd:pfam00890 235 ALTDDLMEFVQFhpTSLVGIRlGSGLLIEALRGEggiLVNKDGRRFMNELASRDVVSRAITRNEIDEGRGANVYLDASGs 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 300 IEESQVQDLFKAYLNMAPaqalkwFDRDINPSKQNIEIEGTEPYIVGG-----HGAsgywVDTRRKTTLDGLYAAGDVSG 374
Cdd:pfam00890 315 LDAEGLEATLPAINEEAI------FGLDVDPYDRPIPVFPAQHYTMGGvrtdeNGR----VLDADGQPIPGLYAAGEVAC 384
|
..
gi 325507512 375 GS 376
Cdd:pfam00890 385 GG 386
|
|
| sdhA |
PRK06452 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
6-548 |
1.05e-16 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 180567 [Multi-domain] Cd Length: 566 Bit Score: 83.40 E-value: 1.05e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 6 DILKTDLLIVGGGTAGCFAAISAAnKPSIHILIVEKFNIKRSGClAAGVNALNAYITKNETPESFVDYVK----KEFNEV 81
Cdd:PRK06452 2 EKIEYDAVVIGGGLAGLMSAHEIA-SAGFKVAVISKVFPTRSHS-AAAEGGIAAYIPGNSDPNDNPDYMTydtvKGGDYL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 82 VREDLIYTAAKRLNRVTEKVEKMGLTILKNEAGEYVSR--GKRS---IKINGENIKPILVDALKKKE---NIEVLNGVNI 153
Cdd:PRK06452 80 VDQDAAELLSNKSGEIVMLLERWGALFNRQPDGRVAVRyfGGQTyprTRFVGDKTGMALLHTLFERTsglNVDFYNEWFS 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 154 VDYIVRDGKVIGAFGFSVKEAKVYIIYAKAVICATGGAAGIYKPNNPGFsrhkmwyspFNTGAGYAMGIRAGAEMTTFE- 232
Cdd:PRK06452 160 LDLVTDNKKVVGIVAMQMKTLTPFFFKTKAVVLATGGMGMLYRHTTNSY---------INTGDGFGIALRAGAALKDPEf 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 233 MRF--IALRCKDTIAPTGTIAQG--IKtpqvNAFGEKYVTRYG------KPTTI-NRLYSTIMENLNGNGPCYLkteGIE 301
Cdd:PRK06452 231 VQFhpTALYPSDVLISEAARGEGgiLK----NVKGERFMTKYApkkldlAPRDIvSRAIITEIREGRGFPGGYV---GLD 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 302 ESQV-QDLFKAYLNMApAQALKWFdRDINPSKQNIEIEGTEPYIVGGHGasgywVD-TRRKTTLDGLYAAGDVSG----- 374
Cdd:PRK06452 304 LTHLgEEYIKERLALA-VEAAKSF-AGVDAFTEPIPVRPAQHYYMGGID-----VDiDGRNPDIVGLFSAGEAACvsvhg 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 375 ----GSPKKYVTGCFaeGEIAAENAIEYISNKHLNTIT--DDEIDEIIHRIKDFFDGKSDFKIEQIEEAMQKVMDEYAGg 448
Cdd:PRK06452 377 anrlGSNSLLDTLVF--GQVTGRTVVQFLKSNPGNPTSnyEKEAEKVVDDAYKFVKSESGVHFGQILEKLRDTMWDYVG- 453
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 449 isqHYRyTEEKLNIAEKRIEELLKLSYKL----KAKG-SHELLFIFELIDRLYVAKVVIAHLKARRETRWKCYEENesYT 523
Cdd:PRK06452 454 ---IYR-DEGGLLNAMSEINKLRGMISNMyvtdKSKVyNTEFFNALELRNMLDLALVIAKSALERKESRGAHYRTD--YP 527
|
570 580
....*....|....*....|....*
gi 325507512 524 ARDDENFLKYVNSIYKEGKVNILYR 548
Cdd:PRK06452 528 DRDDNNWLKHTIAYLRGNTVEVTFK 552
|
|
| PRK06175 |
PRK06175 |
L-aspartate oxidase; Provisional |
8-444 |
1.27e-14 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 180442 [Multi-domain] Cd Length: 433 Bit Score: 76.26 E-value: 1.27e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 8 LKTDLLIVGGGTAGCFAAISAanKPSIHILIVEKFNIKRSGC-LAAGvnALNAYITKNETPESFVDYVKKEFNEVVREDL 86
Cdd:PRK06175 3 LYADVLIVGSGVAGLYSALNL--RKDLKILMVSKGKLNECNTyLAQG--GISVARNKDDITSFVEDTLKAGQYENNLEAV 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 87 IYTAAKRLNRVtEKVEKMGLTILKNEAG-EYVSRGKRSIK-------INGENIKPILVDALKKKENIEVLNGVNIVDYIV 158
Cdd:PRK06175 79 KILANESIENI-NKLIDMGLNFDKDEKElSYTKEGAHSVNrivhfkdNTGKKVEKILLKKVKKRKNITIIENCYLVDIIE 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 159 RDGKVIGAFGFsvKEAKVYIIYAKAVICATGGAAGIYKpnNPGFSRHKmwyspfnTGAGYAMGIRAGAEMTtfEMRFIal 238
Cdd:PRK06175 158 NDNTCIGAICL--KDNKQINIYSKVTILATGGIGGLFK--NSTNQRII-------TGDGIAIAIRNNIKIK--DLDYI-- 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 239 rckdTIAPTGTIAQGIKTPQ--------------VNAFGEKYVTRYgKPTTI--NRLYSTIMENlngNGPC-YLKTEGIE 301
Cdd:PRK06175 223 ----QIHPTAFYEETIEGKKflisesvrgeggklLNSKGERFVDEL-LPRDVvtKAILEEMKKT---GSNYvYLDITFLD 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 302 ESQVQDLFKAYLNmapaQALKwfdRDINPSKQNIEIEGTEPYIVGghgasGYWVDTRRKTTLDGLYAAGDVS-----GGS 376
Cdd:PRK06175 295 KDFLKNRFPTIYE----ECLK---RGIDITKDAIPVSPAQHYFMG-----GIKVDLNSKTSMKNLYAFGEVSctgvhGAN 362
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 325507512 377 pkKYVTGCFAEGEI----AAENAIEYISNKHLNTItddEIDEIIHRIKDFFDGKSDFKIEQIEEAMQKVMDE 444
Cdd:PRK06175 363 --RLASNSLLEGLVfskrGAEKINSEIDNIKLNIT---KVYTLKHDVEYYSLLNKKIIIKEIEKLRGDLKDE 429
|
|
| PRK08626 |
PRK08626 |
fumarate reductase flavoprotein subunit; Provisional |
328-541 |
7.34e-10 |
|
fumarate reductase flavoprotein subunit; Provisional
Pssm-ID: 181507 [Multi-domain] Cd Length: 657 Bit Score: 61.53 E-value: 7.34e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 328 INPSKQNIEIEGTEPYIVGG-----HGASgywvdtrrkTTLDGLYAAGDVS-----------GGSPKKYVTGcfaeGEIA 391
Cdd:PRK08626 355 IDPAKDWIPVRPTQHYSMGGirtnpTGES---------YGLKGLFSAGEAAcwdmhgfnrlgGNSLAETVVA----GMIV 421
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 392 AENAIEYISNKHLNTITD---DEIDEIIHRIKDFFDGKSDFKIEQIEEAMQKVMDEYAgGIsqhYRyTEEKLNIAEKRIE 468
Cdd:PRK08626 422 GKYVADFCLGNELEIDTAlveKFVKKQQDRIDELIAGEGKENVFEIKNEMQEIMMEKV-GI---FR-NGPELEKAVKELQ 496
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 325507512 469 ELLKLSYK--LKAKGSH---ELLFIFELIDRLYVAKVVIAHLKARRETRWKCYEENesYTARDDENFLKYVNSIYKEG 541
Cdd:PRK08626 497 ELLERSKNigLKSKKRGanpELEEALRVPRMLKLALCVAYGALARTESRGAHARED--YPKRNDRDWLNRTLASWPEG 572
|
|
| Succ_DH_flav_C |
pfam02910 |
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate ... |
436-551 |
1.92e-09 |
|
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate dehydrogenases and L-aspartate oxidases.
Pssm-ID: 460743 [Multi-domain] Cd Length: 129 Bit Score: 55.91 E-value: 1.92e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 436 EAMQKVMDEYAGgIsqhYRyTEEKLNIAEKRIEELLKLSYKLKAKGS-----HELLFIFELIDRLYVAKVVIAHLKARRE 510
Cdd:pfam02910 2 RELQKTMQDNVG-V---FR-TEEGLKEALEKIQELRERYKNVRVTDKskvfnTELIEALELANLLELAEATARSALARKE 76
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 325507512 511 TR---WKcyeenESYTARDDENFLKYVNSIY--KEGKVNILYRNLV 551
Cdd:pfam02910 77 SRgahAR-----EDYPERDDENWLKHTLAYYdgDDGGPRLEYEPVT 117
|
|
| PRK08071 |
PRK08071 |
L-aspartate oxidase; Provisional |
9-236 |
4.84e-09 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236147 [Multi-domain] Cd Length: 510 Bit Score: 58.85 E-value: 4.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 9 KTDLLIVGGGTAGCFAAISAAnkPSIHILIVEKFNIKRSGC-LAAGVNAlnAYITKNETPESFVD---YVKKEFN--EVV 82
Cdd:PRK08071 3 SADVIIIGSGIAALTVAKELC--HEYNVIIITKKTKRNSNShLAQGGIA--AAVATYDSPNDHFEdtlVAGCHHNneRAV 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 83 ReDLIYTAAKRLNRVTEKvekmGLTILKNEAGEyVSRGK-------RSIKINGENIKPILVDALKKK--ENIEVLNGVNI 153
Cdd:PRK08071 79 R-YLVEEGPKEIQELIEN----GMPFDGDETGP-LHLGKegahrkrRILHAGGDATGKNLLEHLLQElvPHVTVVEQEMV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 154 VDYIVRDGKVIGAFGFSvKEAKVYIIYAKAVICATGGAAGIYkpnnpgfsrhkmwysPFN------TGAGYAMGIRAGAE 227
Cdd:PRK08071 153 IDLIIENGRCIGVLTKD-SEGKLKRYYADYVVLASGGCGGLY---------------AFTsndktiTGDGLAMAYRAGAE 216
|
....*....
gi 325507512 228 MTtfEMRFI 236
Cdd:PRK08071 217 LV--DLEFI 223
|
|
| PRK09077 |
PRK09077 |
L-aspartate oxidase; Provisional |
135-236 |
5.89e-08 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236374 [Multi-domain] Cd Length: 536 Bit Score: 55.31 E-value: 5.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 135 LVDALKKKENIEVLNGVNIVDYIVRD------GKVIGAFGFSVKEAKVYIIYAKAVICATGGAAGIYK-PNNPGFSrhkm 207
Cdd:PRK09077 144 LVERARNHPNITVLERHNAIDLITSDklglpgRRVVGAYVLNRNKERVETIRAKFVVLATGGASKVYLyTTNPDIA---- 219
|
90 100
....*....|....*....|....*....
gi 325507512 208 wyspfnTGAGYAMGIRAGAEMTTfeMRFI 236
Cdd:PRK09077 220 ------SGDGIAMAWRAGCRVAN--MEFN 240
|
|
| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
352-403 |
4.95e-07 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 51.66 E-value: 4.95e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 325507512 352 GY-WVDTRRKTTLDGLYAAGDVSGGSPKKYVTGcFAEGEIAAENAIEYISNKH 403
Cdd:COG0492 254 GYiVVDEDMETSVPGVFAAGDVRDYKYRQAATA-AGEGAIAALSAARYLEPLK 305
|
|
| PRK06481 |
PRK06481 |
flavocytochrome c; |
9-190 |
3.41e-06 |
|
flavocytochrome c;
Pssm-ID: 180584 [Multi-domain] Cd Length: 506 Bit Score: 49.83 E-value: 3.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 9 KTDLLIVGGGTAGCFAAISAANKpSIHILIVEKFNIKRSGCLAAGvNALNAYITKNETPESFVDYVKKEFNEVVR----- 83
Cdd:PRK06481 61 KYDIVIVGAGGAGMSAAIEAKDA-GMNPVILEKMPVAGGNTMKAS-SGMNASETKFQKAQGIADSNDKFYEETLKggggt 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 84 ---EDLIYTAAKRLNRVtEKVEKMGLTI--LKNEAGEYVSRGKRSikINGENIKPILVDALKK---KENIEVLNGVNIVD 155
Cdd:PRK06481 139 ndkALLRYFVDNSASAI-DWLDSMGIKLdnLTITGGMSEKRTHRP--HDGSAVGGYLVDGLLKnvqERKIPLFVNADVTK 215
|
170 180 190
....*....|....*....|....*....|....*
gi 325507512 156 YIVRDGKVIGAfGFSVKEAKVYIIYAKAVICATGG 190
Cdd:PRK06481 216 ITEKDGKVTGV-KVKINGKETKTISSKAVVVTTGG 249
|
|
| sdhA |
PRK07803 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
145-482 |
4.38e-06 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236101 [Multi-domain] Cd Length: 626 Bit Score: 49.65 E-value: 4.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 145 IEVLNGVNIVDYIVRDGKVIGAFGFSVKEAKVYIIYAKAVICATGGAAGIYK--PNNpgfsrhkmW-YspfnTGAGYAMG 221
Cdd:PRK07803 166 IKVFAECTITELLKDGGRIAGAFGYWRESGRFVLFEAPAVVLATGGIGKSFKvtSNS--------WeY----TGDGHALA 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 222 IRAGAEMttFEMRFIALRckdtiaPTGTI----AQGI-KTPQV--------NAFGEKYVTRYgKPTTINRLYSTIME--- 285
Cdd:PRK07803 234 LRAGATL--INMEFVQFH------PTGMVwppsVKGIlVTEGVrgdggvlkNSEGKRFMFDY-IPDVFKGQYAETEEead 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 286 -----NLNGNGPCYLKTEGIEESQVQDLFKA---------YLNMA---PA------------QALKWFDRDInpSKQNIE 336
Cdd:PRK07803 305 rwykdNDNNRRPPELLPRDEVARAINSEVKAgrgsphggvYLDIAsrlPAeeikrrlpsmyhQFKELADVDI--TKEPME 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 337 IEGTEPYIVGG------HGASgywvdtrrktTLDGLYAAGDVSGGSPKKYVTG--------CFaeGEIAAENAIEYI-SN 401
Cdd:PRK07803 383 VGPTCHYVMGGvevdpdTGAA----------TVPGLFAAGECAGGMHGSNRLGgnslsdllVF--GRRAGLGAADYVrGL 450
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 402 KHLNTITDDEIDEIIHRIKDFFDGKSDFKIE-QIEEAMQKVMDEYAGGISqhyryTEEKLNIAEKRIEELLKLSYKLKAK 480
Cdd:PRK07803 451 GSRPAVSEEAVDAAAREALAPFERPAGAENPyTLHAELQQTMNDLVGIIR-----KEDEIEQALEKLAELKERAANVSVE 525
|
..
gi 325507512 481 GS 482
Cdd:PRK07803 526 GH 527
|
|
| PRK07121 |
PRK07121 |
FAD-binding protein; |
10-295 |
4.89e-06 |
|
FAD-binding protein;
Pssm-ID: 180854 [Multi-domain] Cd Length: 492 Bit Score: 49.12 E-value: 4.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 10 TDLLIVGGGTAGCFAAISAANKPSiHILIVEKFNIK-----RSGCL-----------AAGVNalnayitknETPESFVDY 73
Cdd:PRK07121 21 ADVVVVGFGAAGACAAIEAAAAGA-RVLVLERAAGAggataLSGGViylgggtavqkAAGFE---------DSPENMYAY 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 74 VKKEFNEVVREDLI----------YTAAKRLN----------RVTEKVEKMGLTILKNE-AGEY------VSRGKRSIKI 126
Cdd:PRK07121 91 LRVAVGPGVDEEKLrrycegsvehFDWLEGLGvpfersffpeKTSYPPNDEGLYYSGNEkAWPFaeiakpAPRGHRVQGP 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 127 NGENIKPILVDALKKKE---NIEVLNGVNIVDYIV-RDGKVIGAfgfsvkEAK-----VYIIYAKAVICATGGAagIYKP 197
Cdd:PRK07121 171 GDSGGGAMLMDPLAKRAaalGVQIRYDTRATRLIVdDDGRVVGV------EARrygetVAIRARKGVVLAAGGF--AMNR 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 198 -----NNPGFSRHKMWYSPFNTGAGYAMGIRAGAEMTTFEMRFIALrckdTIAPTGTIAQGIktpQVNAFGEKYV--TRY 270
Cdd:PRK07121 243 emvarYAPAYAGGLPLGTTGDDGSGIRLGQSAGGATAHMDQVFAWR----FIYPPSALLRGI---LVNARGQRFVneDTY 315
|
330 340
....*....|....*....|....*
gi 325507512 271 GkpttiNRLYSTIMENLNGNGpcYL 295
Cdd:PRK07121 316 G-----ARIGQFILEQPGGTA--YL 333
|
|
| PRK08401 |
PRK08401 |
L-aspartate oxidase; Provisional |
14-371 |
2.26e-05 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236259 [Multi-domain] Cd Length: 466 Bit Score: 47.10 E-value: 2.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 14 IVGGGTAGCFAAISAANKPSIHILIVEKFNIKRSGCLAAGVnalnAY-ITKNETPESFV-DYVK--KEFNEvvrEDLIYT 89
Cdd:PRK08401 6 IVGGGLAGLTAAISLAKKGFDVTIIGPGIKKSNSYLAQAGI----AFpILEGDSIRAHVlDTIRagKYIND---EEVVWN 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 90 AAKRLNRVTEKVEKMGLTILKNE--AGEYVSRGKRSIKINGENIKPILVDALKKkenievlNGVNIV-----DYIVRDGK 162
Cdd:PRK08401 79 VISKSSEAYDFLTSLGLEFEGNEleGGHSFPRVFTIKNETGKHIIKILYKHARE-------LGVNFIrgfaeELAIKNGK 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 163 VIGAFgfsvkeAKVYIIYAKAVICATGGAAGIYKpnnpgFSRHkmwySPFNTGAGYAMGIRAGAEMTtfEMRFIALRckd 242
Cdd:PRK08401 152 AYGVF------LDGELLKFDATVIATGGFSGLFK-----FTAG----SPLNLGTLIGDAVMKGAPAR--DLEFVQFH--- 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 243 tiaPTGTIAQ-GIK--TPQVNAFGEKYVTRYGKpTTINRL-------YSTIMENLNGNGpCYLKTEGIEEsqvqdlFKAY 312
Cdd:PRK08401 212 ---PTGFIGKrGTYliSEAVRGAGAKLVTGDGE-RFVNELetrdivaRAIYRKMQEGKG-VFLDATGIED------FKRR 280
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 313 LnmapAQALKWFDRD-INPSKQNIEIEGTEPYIVGGHGasgywVDTRRKTTLDGLYAAGD 371
Cdd:PRK08401 281 F----PQIYAFLRKEgIDPSRDLIPVTPIAHYTIGGIS-----VDTFYRTGIKNLYAIGE 331
|
|
| MerA |
TIGR02053 |
mercury(II) reductase; This model represents the mercuric reductase found in the mer operon ... |
355-405 |
4.61e-04 |
|
mercury(II) reductase; This model represents the mercuric reductase found in the mer operon for the detoxification of mercury compounds. MerA is a FAD-containing flavoprotein which reduces Hg(II) to Hg(0) utilizing NADPH. [Cellular processes, Detoxification]
Pssm-ID: 273944 [Multi-domain] Cd Length: 463 Bit Score: 42.79 E-value: 4.61e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 325507512 355 VDTRRKTTLDGLYAAGDVSGGSPKKYVTGcfAEGEIAAENAIEYiSNKHLN 405
Cdd:TIGR02053 288 VDETLRTSNPGIYAAGDVTGGLQLEYVAA--KEGVVAAENALGG-ANAKLD 335
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
355-395 |
2.53e-03 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 40.46 E-value: 2.53e-03
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 325507512 355 VDTRRKTTLDGLYAAGDVSGGSPKKYVTgcFAEGEIAAENA 395
Cdd:COG1249 290 VDEYLRTSVPGIYAIGDVTGGPQLAHVA--SAEGRVAAENI 328
|
|
| sdhA |
PRK08641 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
352-532 |
2.83e-03 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236319 [Multi-domain] Cd Length: 589 Bit Score: 40.34 E-value: 2.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 352 GYWVDTRRKTTLDGLYAAGDVS----GGSP--KKYVTGCFAEGEIAAENAIEYIsnKHLNTITDD--------EIDEIIH 417
Cdd:PRK08641 357 GLWVDYDQMTNIPGLFAAGECDysyhGANRlgANSLLSAIYGGMVAGPNAVEYI--KGLGKSADDvsssvfeqALKQEQE 434
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325507512 418 RIKDFFDGKSDFKIEQIEEAMQKVMDEYAGGIsqhyRYTEeKLNIAEKRIEELL----KLSYKLKAKGS-HELLFIFELI 492
Cdd:PRK08641 435 KFDNILSMDGTENAYVLHKELGEWMTDNVTVV----REND-KLLETDEKIQELMerykRISVNDTSRWSnQGASFTRQLW 509
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 325507512 493 DRLYVAKVVIAHLKARRETRWKCYEENesYTARDDENFLK 532
Cdd:PRK08641 510 NMLELARVITIGALNRNESRGAHYKPE--FPERNDENWLK 547
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
176-232 |
3.75e-03 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 39.95 E-value: 3.75e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 325507512 176 VYIIYAKAVICATGGAAGIYKPN-NPGFSrhkmwyspfnTGAGYAMGIRAGAEMTTFE 232
Cdd:PRK07804 194 VGAVHAPAVVLATGGLGQLYAATtNPAGS----------TGDGVALALRAGAAVSDLE 241
|
|
| GG-red-SF |
TIGR02032 |
geranylgeranyl reductase family; This model represents a subfamily which includes ... |
11-41 |
3.95e-03 |
|
geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]
Pssm-ID: 273936 [Multi-domain] Cd Length: 295 Bit Score: 39.61 E-value: 3.95e-03
10 20 30
....*....|....*....|....*....|.
gi 325507512 11 DLLIVGGGTAGCFAAISAANKpSIHILIVEK 41
Cdd:TIGR02032 2 DVVVVGAGPAGASAAYRLADK-GLRVLLLEK 31
|
|
| FAD_oxidored |
pfam12831 |
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ... |
11-29 |
7.69e-03 |
|
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.
Pssm-ID: 432816 [Multi-domain] Cd Length: 420 Bit Score: 38.74 E-value: 7.69e-03
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
355-399 |
8.02e-03 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 39.01 E-value: 8.02e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 325507512 355 VDTRRKTTLDGLYAAGDVSGGSPKKYVtgcfA--EGEIAAENAIEYI 399
Cdd:PRK06292 290 VDEHTQTSVPGIYAAGDVNGKPPLLHE----AadEGRIAAENAAGDV 332
|
|
| |
