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Conserved domains on  [gi|290967608|gb|ADD71037|]
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phosphenolpyruvate carboxylase, partial (plastid) [Schiedea verticillata]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PEPcase super family cl21521
Phosphoenolpyruvate carboxylase;
1-39 4.46e-13

Phosphoenolpyruvate carboxylase;


The actual alignment was detected with superfamily member pfam00311:

Pssm-ID: 451287  Cd Length: 920  Bit Score: 59.89  E-value: 4.46e-13
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 290967608    1 VPKFLRRVDTALKNIGiNERVPYNAPLIQFSSWMGGDRD 39
Cdd:pfam00311 215 LPQLYRRLERALKESF-GALLPPLAPFLRFGSWMGGDRD 252
 
Name Accession Description Interval E-value
PEPcase pfam00311
Phosphoenolpyruvate carboxylase;
1-39 4.46e-13

Phosphoenolpyruvate carboxylase;


Pssm-ID: 425598  Cd Length: 920  Bit Score: 59.89  E-value: 4.46e-13
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 290967608    1 VPKFLRRVDTALKNIGiNERVPYNAPLIQFSSWMGGDRD 39
Cdd:pfam00311 215 LPQLYRRLERALKESF-GALLPPLAPFLRFGSWMGGDRD 252
PRK00009 PRK00009
phosphoenolpyruvate carboxylase; Reviewed
 1-39 7.31e-11

phosphoenolpyruvate carboxylase; Reviewed


Pssm-ID: 234570  Cd Length: 911  Bit Score: 53.61  E-value: 7.31e-11
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 290967608   1 VPKFLRRVDTALKNiGINERVPYNAPLIQFSSWMGGDRD 39
Cdd:PRK00009 221 VPKLYRELEEALEE-HFGLQLPLDAAPLRFGSWIGGDRD 258
Ppc COG2352
Phosphoenolpyruvate carboxylase [Energy production and conversion]; Phosphoenolpyruvate ...
 1-39 6.42e-08

Phosphoenolpyruvate carboxylase [Energy production and conversion]; Phosphoenolpyruvate carboxylase is part of the Pathway/BioSystem: Urea cycle


Pssm-ID: 441919  Cd Length: 932  Bit Score: 45.52  E-value: 6.42e-08
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 290967608   1 VPKFLRRVDTALKNIGINERVPyNAPLIQFSSWMGGDRD 39
Cdd:COG2352  229 VPELYRELERALAEHYPDLDPP-LPPFLRFGSWIGGDRD 266
 
Name Accession Description Interval E-value
PEPcase pfam00311
Phosphoenolpyruvate carboxylase;
1-39 4.46e-13

Phosphoenolpyruvate carboxylase;


Pssm-ID: 425598  Cd Length: 920  Bit Score: 59.89  E-value: 4.46e-13
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 290967608    1 VPKFLRRVDTALKNIGiNERVPYNAPLIQFSSWMGGDRD 39
Cdd:pfam00311 215 LPQLYRRLERALKESF-GALLPPLAPFLRFGSWMGGDRD 252
PRK00009 PRK00009
phosphoenolpyruvate carboxylase; Reviewed
 1-39 7.31e-11

phosphoenolpyruvate carboxylase; Reviewed


Pssm-ID: 234570  Cd Length: 911  Bit Score: 53.61  E-value: 7.31e-11
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 290967608   1 VPKFLRRVDTALKNiGINERVPYNAPLIQFSSWMGGDRD 39
Cdd:PRK00009 221 VPKLYRELEEALEE-HFGLQLPLDAAPLRFGSWIGGDRD 258
Ppc COG2352
Phosphoenolpyruvate carboxylase [Energy production and conversion]; Phosphoenolpyruvate ...
 1-39 6.42e-08

Phosphoenolpyruvate carboxylase [Energy production and conversion]; Phosphoenolpyruvate carboxylase is part of the Pathway/BioSystem: Urea cycle


Pssm-ID: 441919  Cd Length: 932  Bit Score: 45.52  E-value: 6.42e-08
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 290967608   1 VPKFLRRVDTALKNIGINERVPyNAPLIQFSSWMGGDRD 39
Cdd:COG2352  229 VPELYRELERALAEHYPDLDPP-LPPFLRFGSWIGGDRD 266
PTZ00398 PTZ00398
phosphoenolpyruvate carboxylase; Provisional
 1-39 3.71e-06

phosphoenolpyruvate carboxylase; Provisional


Pssm-ID: 173589  Cd Length: 974  Bit Score: 40.53  E-value: 3.71e-06
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 290967608   1 VPKFLRRVDTALKNIGINErVPYNAPLIQFSSWMGGDRD 39
Cdd:PTZ00398 267 LPNFIRYIDNVLYEYNLDP-LPPTKKLFTFSSWVGGDRD 304
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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