|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-702 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1423.51 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 1 WIIPFVPLPVPMLIGVGLLLFPTATKNLRRMWAFPSILLLSIVMIFSTNLSIQQINSSSIYQYVWSWTLDNDFSLEFGYL 80
Cdd:CHL00025 9 WIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINNDFSLEFGYL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 81 IDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 160
Cdd:CHL00025 89 IDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 161 PPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNSPFVILCAALLFAGAVAKSAQFPLHV 240
Cdd:CHL00025 169 PIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHV 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 241 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLG 320
Cdd:CHL00025 249 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLG 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 321 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMETIVGYSPDKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGI 400
Cdd:CHL00025 329 YMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGI 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 401 PPLACFWSKDEILNDSWLYSPIFAIIASVTAGLTAFYMFRIYLLTFEGHLNVHFQNFSGNQNTSLYSISLWGKRCSKRIN 480
Cdd:CHL00025 409 PPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWGKEESKKIN 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 481 KNFRLLRMNNNESSSFFSKKTYRSDENVrkRNRERPFINiiHFDNKKPFSYPYESDNTMLFPLLVLVLFTLFVGSLGIPF 560
Cdd:CHL00025 489 KLLLLLTMNNNERVSFFSKKTYKIDGNV--RNMIRSFIT--IFGNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPF 564
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 561 NQEGTDLDILSKWLAPSINLLHQKSKDSTDwyWYEFLKDAIFSVSIAYFGIFLASFLYKPIYSSFKNFDLINSFVKTGPK 640
Cdd:CHL00025 565 NQEGIDLDILSKWLTPSINLLHQNSNNSVD--WYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINSFVKGGPK 642
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 270272223 641 RSLWDKILNVLYDWSYNRAYIDAFYTTAFTGAIRGLAQLTHFFDRRVIDGITNGVGVMSFFV 702
Cdd:CHL00025 643 RIFLDKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITSFFV 704
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-696 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 676.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 1 WIIPFVPLPVPMLIGVGLLLFPTATKNLRRMWAFPSILLLSIVMIFSTNLSIQQINSSSIYQYVWSWTLDNDFSLEFGYL 80
Cdd:PRK07376 9 WLIPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGDFHLPMGYV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 81 IDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 160
Cdd:PRK07376 89 IDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 161 PPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNSPFVILCAALLFAGAVAKSAQFPLHV 240
Cdd:PRK07376 169 KGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHV 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 241 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLG 320
Cdd:PRK07376 249 WLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLG 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 321 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMETIVGYSPDKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGI 400
Cdd:PRK07376 329 YMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGI 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 401 PPLACFWSKDEILNDSWLYSPIFAIIASVTAGLTAFYMFRIYLLTFEGhlnvhfqNFSGNqntslysislwgkrcSKRIN 480
Cdd:PRK07376 409 PPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEG-------EFRGN---------------DKELQ 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 481 KNFRLLRMNNNESSSFFSKKTYRSDENvrkrnrerpfiniihfdnkkpfSYPYESDNTMLFPLLVLVLFTLFVGSLGIPF 560
Cdd:PRK07376 467 KELLAAADAPGHHEGHHEEHGEHHHHS----------------------GSPHESPWTMTLPLVVLAVPSVLIGLLGTPW 524
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 561 NQEGTDLdilskWLAPSINLLHQKSKDstdwyWYEFLKDAIFSVSIAYFGIFLASFLYkpiysSFKNFDLiNSFVKTGPk 640
Cdd:PRK07376 525 NNRFEAF-----LHAPGEALEAAAHFE-----WGEFLILAGASVGIALIGITLASLMY-----LLKKIDP-AAIAERFP- 587
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*.
gi 270272223 641 rslwdkilnVLYDWSYNRAYIDAFYTTAFTGAIRGLAQLTHFFDRRVIDGITNGVG 696
Cdd:PRK07376 588 ---------PLYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTG 634
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-448 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 547.83 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 1 WIIPFVPLpvpmligVGLLLFPTATKNLRRMWAFpsiLLLSIVMIFSTNLSIQ---QINSSSIYQYVWSWTLDNDFSLEF 77
Cdd:COG1009 5 WLIPLLPL-------LGALLAGLLGRRLGRRAAG---WLAALAPLAAFVLSLLlfpAVLGGEVVVELYTWIPVGSLGLDF 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 78 GYLIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW 157
Cdd:COG1009 75 GFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFW 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 158 FTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIynnevNSPFVILCAALLFAGAVAKSAQFP 237
Cdd:COG1009 155 YEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIL-----SSPLLTLILLLLLLGAFGKSAQFP 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 238 LHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMS 317
Cdd:COG1009 230 LHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVS 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 318 QLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMETivgyspdksQNMVLMGGLTKHVPITKTSFLLGTLSL 397
Cdd:COG1009 310 QLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATGT---------RDIRKMGGLRKKMPITAITFLIGALSL 380
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 270272223 398 CGIPPLACFWSKDEILNDSW---LYSPIFAIIASVTAGLTAFYMFRIYLLTFEG 448
Cdd:COG1009 381 AGIPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVFFG 434
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-448 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 533.58 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 1 WIIPFVPLpvpmlIGVGLLLFpTATKNLRRMWAFPSILLLSIVMIFSTNLSIQQINSS--SIYQYVWSWTLDNDFSLEFG 78
Cdd:PRK06590 6 WLIVLLPL-----IGALILGL-FGRRIGEKWAHLVGTGLVGLSALLSLVVFFDFLLGGgrAFSQTLWTWISVGDFDVDFG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 79 YLIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 158
Cdd:PRK06590 80 LRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWY 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 159 TRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRdlfEIFNNLIYNNEVNSPFVILCAALLFAGAVAKSAQFPL 238
Cdd:PRK06590 160 KKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYD---EVFAAAPQFFGLGWSALTLICLLLFIGAMGKSAQFPL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 239 HVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQ 318
Cdd:PRK06590 237 HTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQ 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 319 LGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMetivgyspDKSQNMVLMGGLTKHVPITKTSFLLGTLSLC 398
Cdd:PRK06590 317 LGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRKMGGLRKKMPVTYATFLIGTLALI 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 270272223 399 GIPPLACFWSKDEILNDSWLYSPIFA-IIASVTAGLTAFYMFRIYLLTFEG 448
Cdd:PRK06590 389 GIPPFAGFFSKDEILEAAFANGHINLfVAGLVGAFLTAFYSFRLIFLVFHG 439
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
59-448 |
6.54e-156 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 464.45 E-value: 6.54e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 59 SIYQYVWSWTLDNDFSLEFGYLIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQ 138
Cdd:TIGR01974 59 AFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQ 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 139 IYIFWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNnevnspFV 218
Cdd:TIGR01974 139 LFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPGAFFS------AL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 219 ILCAALLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGA 298
Cdd:TIGR01974 213 TLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAA 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 299 TLALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMEtivgyspdKSQNMVLMGG 378
Cdd:TIGR01974 293 TVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH--------HEQDIRKMGG 364
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 270272223 379 LTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEILNDSW--LYSPIFAIIASVTAGLTAFYMFRIYLLTFEG 448
Cdd:TIGR01974 365 LRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHG 436
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
440-684 |
1.91e-139 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 408.54 E-value: 1.91e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 440 RIYLLTFEGHLNVHFQNFSGNQNTSLYSISLWGKRCSKRINKNFR---LLRMNNNESSSFFSKKTYRSDENVRkrNRERP 516
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRtllLLTMNNNEKVSFFSKKTYRIDGNVR--NMTRP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 517 FINIIHFDNKKPFSYPYESDNTMLFPLLVLVLFTLFVGSLGIPFNQEGTDLDILSKWLAPSINLLHQKSKDSTDWYwyEF 596
Cdd:pfam01010 79 FITITHFDNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNSNNSVDWY--EF 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 597 LKDAIFSVSIAYFGIFLASFLYKPIYSSFKNFDLINSFVKTGPKRSLWDKILNVLYDWSYNRAYIDAFYTTAFTGAIRGL 676
Cdd:pfam01010 157 VTNAIFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGL 236
|
....*...
gi 270272223 677 AQLTHFFD 684
Cdd:pfam01010 237 AELTHFFD 244
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
38-466 |
5.25e-115 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 358.94 E-value: 5.25e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 38 LLLSIVMIFSTNLsiqqiNSSSIYQYVWSWTLDNDFSLEFGYLIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFF 117
Cdd:MTH00210 40 AIVSCCIFYETTL-----NGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFM 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 118 AYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEF 197
Cdd:MTH00210 115 SYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEF 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 198 RDLFEIFNNLIYNNEVNspfvILCAaLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFI 277
Cdd:MTH00210 195 STISSLLVTNINKESLT----IICL-LLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFE 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 278 VIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIH 357
Cdd:MTH00210 270 GSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIH 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 358 SMetivgyspDKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEILNDSW-LYSPIFAI-IASVTAGLTA 435
Cdd:MTH00210 350 AV--------SDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdKYYIAFAYwLGSFSALLTA 421
|
410 420 430
....*....|....*....|....*....|.
gi 270272223 436 FYMFRIYLLTFEGHLNVHFQNFSGNQNTSLY 466
Cdd:MTH00210 422 FYSIRLIYLTFITNTNSKKEVFIGVHESSWN 452
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
38-458 |
1.53e-114 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 357.46 E-value: 1.53e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 38 LLLSIVMIFSTNLsiqqiNSSSIYQYVWSWtLDND-FSLEFGYLIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRF 116
Cdd:MTH00020 40 LSWSFLIFYEILF-----NSSTTYIKLWRW-LDSDlLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRF 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 117 FAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFE 196
Cdd:MTH00020 114 MSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLD 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 197 FRDLFeifnNLIYNNEVNSPFVILCaaLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLF 276
Cdd:MTH00020 194 FSSVF----NMVVSAPSSDITLICL--FLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLF 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 277 IVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVI 356
Cdd:MTH00020 268 EQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVI 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 357 HSMetivgyspDKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEILNDSWL-YSPIFAI-IASVTAGLT 434
Cdd:MTH00020 348 HAL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGqYYLIFAYwLGCFSALLT 419
|
410 420
....*....|....*....|....
gi 270272223 435 AFYMFRIYLLTFEGHLNVHFQNFS 458
Cdd:MTH00020 420 AFYSIRLIYLTFLSNTNLKKAVFF 443
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
12-452 |
1.68e-93 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 302.26 E-value: 1.68e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 12 MLIGVGLLLFPTATKNLRRMWAFPSILLLSIVMIFstnLSIQQINSSSIYQyvWSWTLDNDFSLEFGYLIDPLTSIMSML 91
Cdd:MTH00211 13 LILLLLPLLLPLNNSKLHIKKAVKLSFFISLIPLL---IFLDQGLETILTN--WSWINLGLFSLNLSFKFDFYSIFFTSV 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 92 ITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPPAANACQKAF 171
Cdd:MTH00211 88 ALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 172 VTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnnlIYNNEVNSPFVilcaaLLFAGAVAKSAQFPLHVWLPDAMEGPTP 251
Cdd:MTH00211 168 IYNRIGDIGLLLSMVWLLLNLNSWEISQLF------ILNLDLTLFLL-----GLLLAAMGKSAQFGFHPWLPSAMEGPTP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 252 ISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGSY 331
Cdd:MTH00211 237 VSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQP 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 332 RSALFHLITHAYSKALLFLGSGSVIHSMetivgyspDKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDE 411
Cdd:MTH00211 317 QLAFLHICTHAFFKAMLFMCSGSIIHGL--------NNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDL 388
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 270272223 412 IL---NDSWLYSpiFAIIASVTA-GLTAFYMFRIYLLTFEGHLNV 452
Cdd:MTH00211 389 ILesmNGSYLNA--WALLLTLLAtSLTAAYSFRLIFLSLGGYPRF 431
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
55-413 |
6.60e-90 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 294.56 E-value: 6.60e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 55 INSSSIYQYVWSWTLDNDFSLEFGYLIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSS 134
Cdd:MTH00032 52 INDAVVHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 135 NLIQIYIFWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDL------FEIFNNLI 208
Cdd:MTH00032 132 NYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgSGIMDRGY 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 209 YNNEVN----SPFVILcAALLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMN 284
Cdd:MTH00032 212 YGGGAYesplAPFAII-GILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLL 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 285 LISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGM-GSYRSALFHLITHAYSKALLFLGSGSVIHSMETiv 363
Cdd:MTH00032 291 IITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV-- 368
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 270272223 364 gyspdKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEIL 413
Cdd:MTH00032 369 -----DEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
133-432 |
8.00e-88 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 276.89 E-value: 8.00e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 133 SSNLIQIYIFWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIynne 212
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGL---- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 213 vNSPFVILCAALLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF-IVIPYIMNLISLIG 290
Cdd:pfam00361 77 -NSSGLLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 291 IITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSVIHSMEtivgysp 367
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV------- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 270272223 368 dKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIASVTAG 432
Cdd:pfam00361 228 -HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
42-446 |
2.20e-83 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 276.08 E-value: 2.20e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 42 IVMIFSTNLSIQQINSSsiyqyVWSWTLDNDFSLEFGYLIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMS 121
Cdd:MTH00208 71 INLLIWILLGCPNINIS-----LSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLI 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 122 FFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFefrDLF 201
Cdd:MTH00208 146 IFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSW---NLN 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 202 EIFnnliYNNEVNSPFVILCAALLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPY 281
Cdd:MTH00208 223 EIL----SLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPW 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 282 IMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMet 361
Cdd:MTH00208 299 FLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSL-- 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 362 ivgyspDKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEIL-----NDSWLYSPIFAIIASVtagLTAF 436
Cdd:MTH00208 377 ------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILeaglaSISNLLSIILALIATL---LTAV 447
|
410
....*....|
gi 270272223 437 YMFRIYLLTF 446
Cdd:MTH00208 448 YSFRIIFFCF 457
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
3-442 |
3.19e-82 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 267.01 E-value: 3.19e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 3 IPFVPLPVPMLIGVGLLLFPTATKnLRRMWAFPSILLLSIVMIFstnLSIQQINSSSIYQYVWSWTLDNDFSLEfgylID 82
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLGRRRR-LQRALSLLASLALLALALA---LLLQVLAGGPLVYALGGWPAPFGIVLV----AD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 83 PLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRpP 162
Cdd:COG0651 76 RLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK-E 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 163 AANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFnnliynNEVNSPFVILCAALLFAGAVAKSAQFPLHVWL 242
Cdd:COG0651 155 ALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARL------AELDPGLLLAAFALLLVGFGIKAALFPLHFWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 243 PDAM-EGPTPISALIHAAtMVAAGIFLVARLLPLFI---VIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQ 318
Cdd:COG0651 229 PDAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLFgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 319 LGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSVIHSMetivgyspdKSQNMVLMGGLTKHVPITKTSFLLGTL 395
Cdd:COG0651 308 IGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIGAL 378
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 270272223 396 SLCGIPPLACFWSKDEILNDSW-LYSPIFAIIASVTAGLTAFYMFRIY 442
Cdd:COG0651 379 ALAGLPPLSGFVSKWLLLQAALeAGAWLLAAVLLLSSLLTLAYFVRIF 426
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
42-449 |
4.22e-81 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 269.34 E-value: 4.22e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 42 IVMIFSTNLSIQQINSSsiyqyvWSWTLDNDFSLEFGYLIDPLtsimSMLITTVGIMV----LIYSDNYMAHDQGYLRFF 117
Cdd:MTH00004 49 IPLTLFLNSGTESITTN------WPWIFTTTFNIPISFKLDQY----SLMFLPIALFVtwsiLEFSTWYMASDPHITKFF 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 118 AYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEF 197
Cdd:MTH00004 119 KYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEI 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 198 RDLFeifnnliYNNEVNspfvILCAALLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFI 277
Cdd:MTH00004 199 QQLF-------SPTQTP----TLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQ 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 278 VIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIH 357
Cdd:MTH00004 268 NNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIH 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 358 SMetivgyspDKSQNMVLMGGLTKHVPITkTSFL-LGTLSLCGIPPLACFWSKD---EILNDSWLYSpiFAIIASVTA-G 432
Cdd:MTH00004 348 NL--------NNEQDIRKMGGLQKTLPIT-SSCLtIGNLALMGTPFLSGFYSKDtiiETLNTSYLNA--WALLLTLLAtS 416
|
410
....*....|....*..
gi 270272223 433 LTAFYMFRIYLLTFEGH 449
Cdd:MTH00004 417 FTAAYSLRMILLVQTGF 433
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
1-448 |
1.31e-80 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 268.32 E-value: 1.31e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 1 WIIPFVPLpvpmlIGvGLLLFPTATKNLRRMWAFPSI---LLLSIVMIFSTNLSIQQINSSSIYQYVWSWTLDNDFSLEF 77
Cdd:PRK07390 10 WLIPLYGL-----IG-ALLSLPWSPGIIRRTGPRPAAylnLLMTLLAFVHSLLALRAIWNQPPQQLSFPWLQVADLDLSL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 78 GYLIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW 157
Cdd:PRK07390 84 SLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 158 FTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEifnnliYNNEVN-SPFVI--LCAALLfAGAVAKSA 234
Cdd:PRK07390 164 YAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAA------WAATANlDPLTAtlLGLALI-AGPTGKCA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 235 QFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYS 314
Cdd:PRK07390 237 QFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYS 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 315 TMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIhsMETIvgyspdkSQNMVLMGGLTKHVPITKTSFLLGT 394
Cdd:PRK07390 316 TSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSII--LTTI-------TQDLTELGGLWSRMPATTLAFLVGS 386
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 270272223 395 LSLCGIPPLACFWSKDEILNDSWLYSPIFAIIASVTAGLTAFYMFRIYLLTFEG 448
Cdd:PRK07390 387 AGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVFLG 440
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
72-444 |
8.24e-80 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 269.87 E-value: 8.24e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 72 DFSLEFGYLIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSY 151
Cdd:PRK12647 53 SLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSF 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 152 LLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEiFNNLIynneVNSPFVILCAALLFAGAVA 231
Cdd:PRK12647 133 LLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVI----REHPLYLAILLLVLGGAFT 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 232 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVL 311
Cdd:PRK12647 208 KSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLIL 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 312 AYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVIHSMETivgyspdksQNMVLMGGLTKHVPITKT 388
Cdd:PRK12647 288 AYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHETGT---------RDITKLGGLRRAMPITAA 358
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 270272223 389 SFLLGTLSLCGIPPLACFWSKDEILnDSWLYSPIFAIIASVTAGLTAFYMFRIYLL 444
Cdd:PRK12647 359 AALLAALSMAGLPPLFGFLAKELIY-EALLEAPLWSLILTVAAVLGNALMVAVAFL 413
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
65-441 |
7.81e-79 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 263.31 E-value: 7.81e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 65 WSWTLDNDFSLEFGYLIDpltsIMSMLITTVGIMV----LIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIY 140
Cdd:MTH00066 64 FHWMNIFNFNINSSFKFD----QYSIIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLF 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 141 IFWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNliynnevNSPFVIl 220
Cdd:MTH00066 140 IGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLNDN-------STLPLL- 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 221 caALLFAgAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATL 300
Cdd:MTH00066 212 --GLILA-AAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAAC 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 301 ALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMetivgyspDKSQNMVLMGGLT 380
Cdd:MTH00066 289 ALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQ 360
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 270272223 381 KHVPITKTSFLLGTLSLCGIPPLACFWSKDEI---LNDSWLYSpiFAIIASVTA-GLTAFYMFRI 441
Cdd:MTH00066 361 KALPITTSCLTIGSLALTGTPFLAGFFSKDAIieaMNTSNLNS--WALILTLIAtSFTAVYSFRI 423
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
37-449 |
2.73e-75 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 258.32 E-value: 2.73e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 37 ILLLSIVM--IFSTNLSIQQINSSSIYQYVWSWTLDNDFSLefgyLIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYL 114
Cdd:PRK12645 34 VLPVPVVLfiYFLSLIPTTMSGNTVMKTLPWIPSLGINFTL----YVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQL 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 115 -RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITG 193
Cdd:PRK12645 110 gNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTG 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 194 SFEFRDLFEIFNNLiynneVNSPFVILCAALLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 273
Cdd:PRK12645 190 SFSIREMIANADEI-----QNSPLFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFT 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 274 PLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGS----------------YRSALFH 337
Cdd:PRK12645 265 PIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAaslhyqgddskiyaaaITAAIFH 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 338 LITHAYSKALLFLGSGSVIHSMETivgyspdksQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEILN--- 414
Cdd:PRK12645 345 LINHATFKGSLFMIVGIVDHETGT---------RDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFEsml 415
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 270272223 415 ----------DSW-LYSPIFAIIASVtagLTAFYMFRIYLLTFEGH 449
Cdd:PRK12645 416 nateanlfslDTWgVLFPVIAWVASV---FTFVYSIIFIFKTFFGK 458
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
65-449 |
2.02e-74 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 251.70 E-value: 2.02e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 65 WSWTLDNDFSLEFGYLIDpLTSIMSM---LITTVGIMVliYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYI 141
Cdd:MTH00108 66 WHWMTIQTLKLSLSFKLD-YFSMIFIpvaLFVTWSIME--FSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFI 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 142 FWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnnLIYNNEVNSPFVilc 221
Cdd:MTH00108 143 GWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIF-----MLNPNNSNLPLM--- 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 222 aALLFAgAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLA 301
Cdd:MTH00108 215 -GLLLA-ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICA 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 302 LAQKDIKRVLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMetivgyspDKSQNMVLMGGLTK 381
Cdd:MTH00108 293 LTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNL--------NDEQDIRKMGGLFK 364
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 270272223 382 HVPITKTSFLLGTLSLCGIPPLACFWSKD---EILNDSwlYSPIFAIIASVTA-GLTAFYMFRIYLLTFEGH 449
Cdd:MTH00108 365 TLPFTSTALIIGSLALTGMPFLTGFYSKDliiEAANTS--YTNAWALLITLIAtSLTAAYSTRIIFFALLGQ 434
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
73-448 |
7.64e-74 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 254.39 E-value: 7.64e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 73 FSLEFGYLIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYL 152
Cdd:TIGR00940 65 LGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 153 LIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIynnevNSPFVILCAALLFAGAVAK 232
Cdd:TIGR00940 145 LISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAIR-----NSPLFGTAMVLVLLGAFTK 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 233 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLA 312
Cdd:TIGR00940 220 SAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 313 YSTMSQLGYMMLALGMGS----------------YRSALFHLITHAYSKALLFLGSGSVIHSMETivgyspdksQNMVLM 376
Cdd:TIGR00940 300 FSTISQLGLIMVLLGLGSpsyhyqgddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHETGT---------RDIRKL 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 377 GGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEILN-------------DSWLY-SPIFAIIASVtagLTAFYMFRIY 442
Cdd:TIGR00940 371 GGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAeaitahlvnpfdtVTLGYlFPYVATVASV---FTFVYSLRFI 447
|
....*.
gi 270272223 443 LLTFEG 448
Cdd:TIGR00940 448 HGVFFG 453
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
106-441 |
7.26e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 247.44 E-value: 7.26e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 106 YMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLllgI 185
Cdd:MTH00137 111 YMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---I 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 186 LGFYWI---TGSFEFRDLFEIFNNLiynnEVNSPFVILCAAllfagAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMV 262
Cdd:MTH00137 188 LAMAWMatnLNSWEIQQIFALSKDF----DLTLPLLGLILA-----ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMV 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 263 AAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRSALFHLITHA 342
Cdd:MTH00137 259 VAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHA 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 343 YSKALLFLGSGSVIHSMetivgyspDKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEI---LNDSWL- 418
Cdd:MTH00137 339 FFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLn 410
|
330 340
....*....|....*....|....
gi 270272223 419 -YSPIFAIIASvtaGLTAFYMFRI 441
Cdd:MTH00137 411 aWALTLTLIAT---SFTAVYSLRV 431
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
14-426 |
2.97e-71 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 239.49 E-value: 2.97e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 14 IGVGLLLFPTATKnlRRMWAFPSILLLSIVMIFSTNLSIQQINSSSIYQYVWSWtldNDFSLeFGYLIDPLTSIMSMLIT 93
Cdd:PRK06525 12 FIGALVVFFLPGR--RAAELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNL---GDVAL-FGLVIDPVSVLIGFVVV 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 94 TVGIMVLIYSDNYMA-------HDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTrPPAANA 166
Cdd:PRK06525 86 LLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQS-PKALRS 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 167 CQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLfeifnnliyNNEVNSPFVILCAALLFAgAVAKSAQFPLHVWLPDAM 246
Cdd:PRK06525 165 ALKALLITHIGSLGLYLAAATLFLQTGTFALSAL---------SGLHGSLKYLVFLGILFA-AWGKSAQLPFYSWLPDAM 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 247 EGPTPISALIHAATMVAAGIFLVARLL----PLFIVIPYIMnliSLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYM 322
Cdd:PRK06525 235 EAPTPASAYLHAASMVKVGVYIFARAIqsmgPIPHVIGYVG---AVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYM 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 323 MLALGMGSYRS------ALFHLITHAYSKALLFLGSGSVIHSMETivgyspdksQNMVLMGGLTKHVPITKTSFLLGTLS 396
Cdd:PRK06525 312 FFGLSLAILGSrlalegSIAYIFNHAFAKSLFFLVAGALSYSCGT---------RLLPRLRGVLKKLPLVGVGFCVAALA 382
|
410 420 430
....*....|....*....|....*....|
gi 270272223 397 LCGIPPLACFWSKDEILNDSWLYSPIFAII 426
Cdd:PRK06525 383 ITGVPPFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
63-440 |
2.36e-69 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 244.45 E-value: 2.36e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 63 YVWSWTldNDFSLEFGYLIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYI 141
Cdd:PRK12644 56 EVVPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 142 FWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDlfeifnnlIYNNEVNSPFVILC 221
Cdd:PRK12644 134 FWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSE--------LLADPPTGPAVSVA 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 222 AALLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLA 301
Cdd:PRK12644 206 VVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRA 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 302 LAQKDIKRVLAYSTMSQLGYMMLALGMGSYRSALFHL---ITHAYSKALLFLGSGSVIHSMETivgyspdksQNMVLMGG 378
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHSTGT---------RDIRKLSG 356
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 270272223 379 LTKHVPITKTSFLLGTLSLCGIPPLACFWSK----DEILNDSWLYSPIFAIIASVTAG--LTAFYMFR 440
Cdd:PRK12644 357 LGRRQPVLAVVAALAAASMAGLPPLLGFVAKeaalEAVLHDGALGPAGPVVLAGIVLGsiLTVAYSLR 424
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
75-440 |
1.63e-68 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 242.02 E-value: 1.63e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 75 LEFGYLIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLI 154
Cdd:PRK12648 68 LNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 155 GFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFefrDLFEIFNN--LIYNNEVNSPFVILcaALLfaGAVAK 232
Cdd:PRK12648 148 GYWHHRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSY---DLDVVLAAgdLIRAHPLYPPALVL--ILL--GAFTK 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 233 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLA 312
Cdd:PRK12648 221 SAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 313 YSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSVIHsmETivgyspdKSQNMVLMGGLTKHVPITKTS 389
Cdd:PRK12648 301 YSTISHLGLITLLLGLGSPLAavaAIFHIINHATFKASLFMAAGIIDH--ET-------GTRDMRRLSGLRRLMPITATL 371
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 390 FLLGTLSLCGIPPLACFWSK----DEILNDSWLYS-----PIFAIIASVtagLTAFYMFR 440
Cdd:PRK12648 372 AMVAAAAMAGVPLLNGFLSKemffAETLDTHLLGSldwllPVAATLAGA---FSVAYSLR 428
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
75-410 |
2.00e-68 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 239.35 E-value: 2.00e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 75 LEFGYLIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLI 154
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 155 GFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEifNNLIYNNEVNSPFVILCAALLFAGAVAKSA 234
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQ--DSELIENIKGHPLFLITLILIFIGAAAKSA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 235 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYS 314
Cdd:PRK12649 230 QGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 315 TMSQLGYMMLALGMGSYR-------SALFHLITHAYSKALLFLGSGSVIHSMETivgyspdksQNMVLMGGLTKHVPITK 387
Cdd:PRK12649 310 TISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEAAT---------RDIRKLGGLRKEMPITF 380
|
330 340
....*....|....*....|...
gi 270272223 388 TSFLLGTLSLCGIPPLACFWSKD 410
Cdd:PRK12649 381 IVASIAALAMAGIPPLNGFLSKE 403
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
65-451 |
3.43e-64 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 227.72 E-value: 3.43e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 65 WSWTLDNDFSLEfgylIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYIFW 143
Cdd:PRK12646 64 WMKTLDINLDLR----LDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFW 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 144 ELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLiynneVNSPFVILCAA 223
Cdd:PRK12646 140 ELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHI-----KNHGLFIPMIF 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 224 LLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALA 303
Cdd:PRK12646 215 MFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALK 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 304 QKDIKRVLAYSTMSQLGYMMLALGMG-----------------SYRSALFHLITHAYSKALLFLGSGSVIHSMETivgys 366
Cdd:PRK12646 295 QWDLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHEAGT----- 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 367 pdksQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKD----------EILNDSWLYSPIFAIIASVTAGLTAF 436
Cdd:PRK12646 370 ----RDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEmfldaltqtgQLSQFSLISMIIIVFIGVIASIFTFT 445
|
410
....*....|....*
gi 270272223 437 YMFRIYLLTFEGHLN 451
Cdd:PRK12646 446 YALYMVKEVFWGKYD 460
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
36-470 |
1.47e-63 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 221.55 E-value: 1.47e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 36 SILLLSIVMIFSTNLSIQQINSSSIYQYVWSWTLDNDFSLEFGYLIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLR 115
Cdd:MTH00165 7 SFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINR 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 116 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPPAANACQKAFVTNRVGDFGLLLGIlGFYWITGSF 195
Cdd:MTH00165 87 FIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSI-AWMMNFGSW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 196 EFrdlfeIFNNLIYNNEVNSPFVILcaaLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 275
Cdd:MTH00165 165 NF-----IFYLDFMKNSFEMLLIGL---LIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 276 FIvIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSV 355
Cdd:MTH00165 237 LF-SSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSI 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 356 IHSMetivgyspDKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEILNDSWL--YSPIFAIIASVTAGL 433
Cdd:MTH00165 316 IHNM--------SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMsnLNFFIFFLFFFSTGL 387
|
410 420 430
....*....|....*....|....*....|....*...
gi 270272223 434 TAFYMFRIYLLTFEGHLNVH-FQNFSGNQNTSLYSISL 470
Cdd:MTH00165 388 TVSYSFRLIYYSMSGDFNLKsLNNLSDESKFMLKSMIL 425
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
37-462 |
3.93e-62 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 217.21 E-value: 3.93e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 37 ILLLSIVMIFSTNLSIQQINSSSIYQYVWSWTLDNDFSLEFGYLIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRF 116
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 117 FAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFwFTRPPAANACQKAFVTNRVGDFGLLLGILGFYwitgsfe 196
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIY-YQNSKSLSAGMLTALTNRVGDALLILSIAWML------- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 197 frdLFEIFNNLIYNNEVNSPFVILCAALLfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLF 276
Cdd:MTH00209 158 ---MHGNWNIFYLNFNSNLGSVISVLIVL--AAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 277 IVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVI 356
Cdd:MTH00209 233 FSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNII 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 357 HSMEtivgyspdKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEILnDSWLYSPIFAIIAS---VTAGL 433
Cdd:MTH00209 313 HSHG--------HSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL-ESMLESNMPIMTLIlmfLSTSL 383
|
410 420
....*....|....*....|....*....
gi 270272223 434 TAFYMFRIYLLTFEGHLNVHFQNFSGNQN 462
Cdd:MTH00209 384 TAAYSMRLSYFSLWGPNSSKSLNSSFDQN 412
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
10-457 |
4.16e-60 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 209.94 E-value: 4.16e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 10 VPMLIGVGLLLFPTATKNLRRMWAFPS---ILLLSIVMIFSTNlsiqqiNSSSIYQYVWSWTLDNDFSLEFGYLIDPLTS 86
Cdd:COG1008 12 LPLLGALLLLLLPRRNARLARWVALAVsllTLLLSLYLLAGFD------PGTGGFQFVESYPWIPSLGISYHLGVDGISL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 87 IMSMLITTVGIMVLIYSDNYMAHDQGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW--FTRPPAA 164
Cdd:COG1008 86 PLVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIYAA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 165 NacqKAFVTNRVGDFGLLLGILGFYWITGSFEFrDLFEIfnnliYNNEVNSPFVILCAALLFAG-AVaKSAQFPLHVWLP 243
Cdd:COG1008 164 I---KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAEL-----AAAPLPLTAQLLLFLAFFIAfAV-KVPMFPFHTWLP 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 244 DA-MEGPTPISAlIHAATMVAAGIFLVARL-LPLFiviP----YIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMS 317
Cdd:COG1008 234 DAhVEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF---PeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVS 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 318 QLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSVIHSMetivgyspdKSQNMVLMGGLTKHVPITKTSFLLGT 394
Cdd:COG1008 310 HMGFVLLGIFALNPLGlqgAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVLAALFLLAA 380
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 270272223 395 LSLCGIPPLACFWSKDEILNDSWLYSPIFAIIASVTAGLTAFYMFRIYLLTFEGHLNVHFQNF 457
Cdd:COG1008 381 LASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAEL 443
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
36-466 |
4.86e-60 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 211.63 E-value: 4.86e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 36 SILLLSIVMIFSTNLSIQQINSSSiyqYVWSWTLDNDFSLEFGY--LIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGY 113
Cdd:MTH00151 8 SFLLFSYSVFLFPLLGYFGLNGIS---LIFEWELLSVSSCSFSFelVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 114 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWftrpPAANACQKAFVT---NRVGDFGLLLGILGFYw 190
Cdd:MTH00151 85 KRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYY----QNKKSLSAGMLTaltNRIGDVLILLSIALLV- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 191 ITGSFefrdlfeifnnLIYNNEVNSPFVILCAALLFAGaVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVA 270
Cdd:MTH00151 160 LLGHW-----------SILSMWDFKLSGWLGLLLVLAA-MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLI 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 271 RLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFL 350
Cdd:MTH00151 228 RFFPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFL 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 351 GSGSVIHSMetivgyspDKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEILnDSWLYSP---IFAIIA 427
Cdd:MTH00151 308 CAGSIIHSS--------SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLIL-ESSLMSPtslLMVLLM 378
|
410 420 430
....*....|....*....|....*....|....*....
gi 270272223 428 SVTAGLTAFYMFRIYLLTFEGHLNVHFqnFSGNQNTSLY 466
Cdd:MTH00151 379 FVGVGLTALYSARLSFCLVWGSMKSSS--LSSKSDEDFY 415
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
24-443 |
6.09e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 208.85 E-value: 6.09e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 24 ATKNLRRMWAFPSILLLSIVMIFSTNL---SIQQINSSSIYqyvwswtldndfsleFGYLIDPLTSIMSMLITTVGIMVL 100
Cdd:MTH00207 10 ASYLLWFMSILMFPLSLYLMMCNKTILiewEIFTISSSPIN---------------FTIILDPTGTLFSSTVLFISANVL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 101 IYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPPAANACQKAFVTNRVGDFG 180
Cdd:MTH00207 75 LFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVM 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 181 LLLGIlGF-----YWITGSFEFRDLfeifnnliynnevnSPFVILCAALlfaGAVAKSAQFPLHVWLPDAMEGPTPISAL 255
Cdd:MTH00207 154 LLLSI-GWtlnqgHWSITNMWQTDM--------------NNYIALSIMI---AAMTKSAQMPFSSWLPAAMAAPTPVSAL 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 256 IHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRSAL 335
Cdd:MTH00207 216 VHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLAL 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 336 FHLITHAYSKALLFLGSGSVIHSMEtivgyspdKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEILnD 415
Cdd:MTH00207 296 FHLITHALFKALLFVCAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLIL-E 366
|
410 420 430
....*....|....*....|....*....|.
gi 270272223 416 SWLYSPIFAIIAS---VTAGLTAFYMFRIYL 443
Cdd:MTH00207 367 SSLFYPHNSLMILmifLATALTAAYSTRFTL 397
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-448 |
4.04e-55 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 197.12 E-value: 4.04e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 10 VPMLIGVGLLLFPTATKNLRRMWAFPSI--LLLSIVMIFSTNLSIQQINSSS---IYQYvwswtldNDFSLEFG--YLID 82
Cdd:PRK12667 9 TPILLVLFAFLLPLLSILLKGNRKIQKIyaLLVSLITLILSILLFIQVYSSNkpiVYLF-------GGWPAPIGivYEVD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 83 PLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPP 162
Cdd:PRK12667 82 LLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 163 AANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLiYNNEVNSPFVILCAALLFAGAVA------KSAQF 236
Cdd:PRK12667 162 AVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGL-SFPLTGGLAGNPPLALGVALALAlwaftiKAAIF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 237 PLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL--------PLFIVIPYIMNLISLIGIITVLLGATLALAQKDI 307
Cdd:PRK12667 241 PNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMMVVQKDV 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 308 KRVLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVIHSMetivgyspdKSQNMVLMGGLTKHVP 384
Cdd:PRK12667 320 KRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAGLGRKMP 390
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 270272223 385 ITKTSFLLGTLSLCGIPPLACFWSKdEILNDSWLYS--PIFAIIASVTAGLTAFYMFRIYLLTFEG 448
Cdd:PRK12667 391 IASFAFLIGALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
8-439 |
1.19e-54 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 202.20 E-value: 1.19e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 8 LPVPMLIGVGLLLFPTATKNLRRMWAFPSILLLSIVMIFSTNLSIQQINSSSI-YQYVWSWTLD-NDFSLEFGYLIDPLT 85
Cdd:PRK12650 2 LAVLALAALAVVLAPPLVRVLDRKAGWPLAAIFVAAAGLLLKELPPILDGDALtWSVTWIPDLLgNGVDVNLALRADALS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 86 SIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFwfTRPPAAN 165
Cdd:PRK12650 82 LFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR--SGSGGEA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 166 ACQKAFVTNRVGDFGLLLGILGFYWITGSfefRDLFEIFNNLIYNNevNSPFVILCAALLFAGAVAKSAQFPLHVWLPDA 245
Cdd:PRK12650 160 GSIRTLILTFFGGLTLLAAVAIAATQTGT---TSLSGILHSDVWAE--KPGLTTVVAVLIAVAAFTKSAQFPFHFWLPEA 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 246 MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLA 325
Cdd:PRK12650 235 MAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVAT 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 326 LGMGS---YRSALFHLITHAYSKALLFLGSGSVIHSMETivgyspdksQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPP 402
Cdd:PRK12650 315 IGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDHQAGT---------RDIRRLGSLWRRMPFTFVSVTIAALSMAAVPP 385
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 270272223 403 LACFWSKDEILnDSWLYSPIFA---IIASVTAGLTAFYMF 439
Cdd:PRK12650 386 LFGFVSKEGML-TAFLEAPGGNagvVLLLVGAALGAVFTF 424
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-441 |
1.37e-54 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 194.71 E-value: 1.37e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 2 IIPFVPLPVPmLIGVGLLLFPTATKNLRRMWAFpsilLLSIVMIFSTNLSIQQINSSSIYQYV---WSWTLdndfSLEFG 78
Cdd:PRK08375 4 HLLPLLVAVP-LLAAALIVLLPKRRRLRWALAL----LVAALTFALAISLLPQVLDGGVIAYVvggWPPGI----GIELR 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 79 ylIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 158
Cdd:PRK08375 75 --ADSLSALFLLVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 159 TRPpAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNliyNNEVNSPFVILCAALLfagavAKSAQFPL 238
Cdd:PRK08375 151 DRR-ALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAE---NPTVVTAFGFVLLALA-----LKAAVFPL 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 239 HVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL-----PLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAY 313
Cdd:PRK08375 222 HTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAY 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 314 STMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSVihsMETIvgyspdKSQNMVLMGGLTKHVPITKTSF 390
Cdd:PRK08375 302 STVSQMGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAI---EVTY------GTRRLSELSGLGRRMPLTAAAF 372
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 270272223 391 LLGTLSLCGIPPLACFWSKDEIL---NDSWLYSPIFAIIASVTagLTAFYMFRI 441
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSKWYLVvgaVEAGQWLVLAVLLASSL--LALLYFLRI 424
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
81-448 |
7.69e-53 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 190.69 E-value: 7.69e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 81 IDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 160
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 161 PPAANACQKAFVTNRVGDFGLLLGILGFYwitGSFEFRDLFEIFNNLIYNNEVNSpfvILCAALLFAGAVAKSAQFPLHV 240
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLY---GQYGTLNMAYLAVKMSENPTVVA---KIALALFIAGLAMKSGAVPVHM 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 241 WLPDAM-EGPTPISALIHAATmvAAGIFLVARLlpLFIVIPYIMNL------ISLIGIITVLLGATLALAQKDIKRVLAY 313
Cdd:PRK08376 242 WLPDAYpAAPSSISAMLLVIK--QAGLYALARV--LFSIYGPAINLatvgwvIIILGCLTMFVGVAMAVVQKDVKRLLAY 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 314 STMSQLGYMMLALGMG--SYRS-------------ALFHLITHAYSKALLFLGSGSVIHSMETivgyspdksQNMVLMGG 378
Cdd:PRK08376 318 HSVSQIGYMLLGLGVGlaALGDpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETGT---------RNLNELGG 388
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 379 LTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIASVTAGLTAFYMFRIYLLTFEG 448
Cdd:PRK08376 389 LARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
2-441 |
3.73e-47 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 173.76 E-value: 3.73e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 2 IIPFVPLPVPMLIGVGLLLFPTATKNLRRMWAFPSILLLSIVMIFSTnlsiqqinsssiyqyVWSWTLDNDFSLEFGYLI 81
Cdd:COG1007 4 LLALLPEIILLLGALVLLLLDLFLPRRSRRLLAGLALLGLLLALALL---------------LLALGGGTGTAFGGMFVV 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 82 DPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTS-MLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 160
Cdd:COG1007 69 DGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDD 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 161 PPAANACQKAFVTnrvGDFG---LLLGILGFYWITGSFEFRDLFEIfnnlIYNNEVNSPFVILCAALLFAGAVAKSAQFP 237
Cdd:COG1007 149 RRSSEAALKYFLL---GALSsgfLLYGISLLYGATGSLNLAGIAAA----LAAGGANSPLLLLGLVLVLAGLAFKLSAVP 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 238 LHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYS 314
Cdd:COG1007 222 FHMWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYS 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 315 TMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLgsgsVIhsmeTIVGYSPDKSQNMVLMGGLTKHVPITKTSFL 391
Cdd:COG1007 301 SIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VI----LLLSRKGGEAEEIEDLAGLARRSPLLALAMT 372
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 270272223 392 LGTLSLCGIPPLACFWSKDEILNDSW---LYspIFAIIASVTAGLTAFYMFRI 441
Cdd:COG1007 373 IFLLSLAGIPPTAGFFGKFYVFSAAVeagLY--WLAVIAVLNSVISAYYYLRV 423
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
2-441 |
2.11e-44 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 166.15 E-value: 2.11e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 2 IIPFVPLPVPMLIGVGLLLFPTATKNLRRMWAFPSILLLSIVMIFstnlsiqqinsssiyqYVWSWTLDNDFSLEFGYLI 81
Cdd:PRK05777 8 LILLLPELILLGAAVVLLLIDAFVRRHSRRATLAVLALLLALVAL----------------LFVLGAAGGGTAFGGMLVV 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 82 DPLTSIMSMLITTVGIMVLIYSDNYMAhDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRP 161
Cdd:PRK05777 72 DGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRR 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 162 PAANACQKAFVtnrVGDFG---LLLGILGFYWITGSFEFRDLFeifnNLIYNNEVNSPFVILCAALLFAGAVAKSAQFPL 238
Cdd:PRK05777 151 RSLEAAIKYFV---LGALAsgfLLYGMSLLYGATGSLSFAGIA----KALADGSGNSLLLLFGLVFLLVGLAFKLSAVPF 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 239 HVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLLPLFI--VIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYST 315
Cdd:PRK05777 224 HMWTPDVYEGaPTPVTAFLATAPKIAA-FAVLLRLLVVAFggLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 316 MSQLGYMMLALGMGS---YRSALFHLITHAYSKallfLGSGSVIHSMETIVGYSPDKSQnmvlMGGLTKHVPITKTSFLL 392
Cdd:PRK05777 303 IAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGEAESISD----FAGLSKRSPLLAAVMTI 374
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 270272223 393 GTLSLCGIPPLACFWSKDEIL------NDSWLyspifAIIASVTAGLTAFYMFRI 441
Cdd:PRK05777 375 FMLSLAGIPPTAGFWGKFYVFeaaveaGLWWL-----AVIGVLNSAIGAFYYLRV 424
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
81-448 |
2.13e-42 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 163.52 E-value: 2.13e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 81 IDPLTSIMSMLITTVGIMVLIYSDNYM--AHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 158
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFreYEGKGPGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANH 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 159 TRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEifNNLiynnevnSPFVILCAALL-FAGAVAKSAQFP 237
Cdd:PRK06521 158 REAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRA--AHL-------SPFWASLVFLLaLFGFGAKAGLVP 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 238 LHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFIVIP-----YIMnLIslIGIITVLLGATLALAQKDIKRVL 311
Cdd:PRK06521 229 LHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPgwwwgVLV-LA--LGAISAVLGVLYALAEHDLKRLL 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 312 AYSTMSQLGYMMLALGMG--------------SYRSALFHLITHAYSKALLFLGSGSVIHSMETivgyspdksQNMVLMG 377
Cdd:PRK06521 305 AYSTIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATGT---------RDMEKLG 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 378 GLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEIL--------NDSWLYS---PIFAIIASVTAGLTAFYMFRIYLLTF 446
Cdd:PRK06521 376 GLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLqsllsspgLPQWGLKlavPIAAAMLALTAALAAMCFVKFYGITF 455
|
..
gi 270272223 447 EG 448
Cdd:PRK06521 456 LG 457
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
10-451 |
9.15e-41 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 156.13 E-value: 9.15e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 10 VPMLIGVGLLLFPTATKNLRRMWAFPS---ILLLSIVMIFSTNlsiqqiNSSSIYQYVWSWTLDNDFSLEFGYLIDPLTS 86
Cdd:PRK05846 12 LPLIGGLLVLLTERFGARLARWIALIGtllTLLLSLVLWIGFD------SSNAGFQFVEKHPWIPRFGISYHLGVDGISL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 87 IMSMLITTVGIMVLIYSDNYMAHDQGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWE--LVGMcsYLLIGFW--FTRPP 162
Cdd:PRK05846 86 LLVVLTALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEamLIPM--YFLIGVWggKNRIY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 163 AANacqKAFVTNRVGDFGLLLGILGFYWI----TGSFEFRDLfeifnnliYNNEVnSPFV--ILCAALLFAGAVaKSAQF 236
Cdd:PRK05846 162 AAT---KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADL--------LNLPL-PPGVqyWLFLAFFIAFAV-KMPMF 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 237 PLHVWLPDAMEGPTPISALIHAATMVAAGIF-LVARLLPLFIVIP-YIMNLISLIGIITVLLGATLALAQKDIKRVLAYS 314
Cdd:PRK05846 229 PLHTWLPDAHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDAShEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYS 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 315 TMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSVIHSMETivgyspdksQNMVLMGGLTKHVPITKTSFL 391
Cdd:PRK05846 309 SISHMGFVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVLYDRLHT---------RDIADYGGLAKVMPVLAAFFL 379
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 392 LGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIASVTAGLTAFYMFRIYLLTFEGHLN 451
Cdd:PRK05846 380 FFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVK 439
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
58-439 |
1.12e-40 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 157.85 E-value: 1.12e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 58 SSIYQYVWSWTLD---------NDFSLEFGYLIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFfsTSML 128
Cdd:PRK08668 35 PLLFLIKLYFTLKvgtgekltlFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVL 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 129 GLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRppAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFrdlFEIFNNLI 208
Cdd:PRK08668 113 GVFLANDLLTLYIFWEIMTFSSFMMVPMGKKE--SRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDF---ADISQGLI 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 209 ynNEVNSPFVILCAALLFAGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLLP---------LF 276
Cdd:PRK08668 188 --NDTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtklfsefgTY 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 277 IVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSG 353
Cdd:PRK08668 266 RGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFA 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 354 SVIHSMETivgyspdksQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKdeilndsWLyspIFAIIASVTAGL 433
Cdd:PRK08668 346 AVIYRTGT---------TKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK-------WL---IFEALISKGMPI 406
|
....*.
gi 270272223 434 TAFYMF 439
Cdd:PRK08668 407 TAFMAF 412
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
2-356 |
1.75e-40 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 155.63 E-value: 1.75e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 2 IIPFVPlPVPMLIGVGLLLF-PTATKNLRRMWAFPSILLLSIVMIFSTNLSIQQINSSSIYQYVwswtldndfslefgyl 80
Cdd:PRK08168 5 VCALLP-AVLMSLAAGGLLLsRWLTRALWRIAQAASLAGLFLALLGLVLFATGAAWPAAAWLEV---------------- 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 81 iDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 160
Cdd:PRK08168 68 -SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDR 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 161 PPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIfnnliYNNEVNSPFVILCAALLFAGAVAKSAQFPLHV 240
Cdd:PRK08168 147 PFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAH-----LAAQGASPSLQAAALLLVLAVILKTAQLPVHG 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 241 WLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLG 320
Cdd:PRK08168 222 WLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMG 300
|
330 340 350
....*....|....*....|....*....|....*.
gi 270272223 321 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVI 356
Cdd:PRK08168 301 FMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
10-456 |
3.19e-39 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 151.25 E-value: 3.19e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 10 VPMLIGVGLLLFPTATKNLRRMWAFPSIL--LLSIVMIFSTnLSIQQINSSSIYQYVWSWTLDNDFSLEfgylIDPLTSI 87
Cdd:TIGR01972 7 LPLIGALLILLLPSNKDGKARWIALVVALatLLLSLLLLFQ-FDPTGSGFQFTEDIPWIPALGISYHLG----VDGISLL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 88 MSMLITTVGIMVLIYSDNYMAHDQGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWfTRPPAANAC 167
Cdd:TIGR01972 82 LVLLTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYAA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 168 QKAFVTNRVGDFGLLLGILGFYWITG-SFefrDLFEIFNNLIYNNEVnspfVILCAALLFAGAVaKSAQFPLHVWLPDAM 246
Cdd:TIGR01972 159 MKFFLYTLAGSLLMLLAILGLYFLGGgTF---DLLELLNLPLPFGVQ----TWLFLAFFIAFAV-KVPLFPLHTWLPDAH 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 247 -EGPTPISALIHAATMVAAGIFLVARLLPLFiviP----YIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGY 321
Cdd:TIGR01972 231 vEAPTAGSVILAGVLLKMGTYGFLRFNLPLF---PdaslYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGF 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 322 MMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSVihsmetivgYSPDKSQNMVLMGGLTKHVPITKTSFLLGTLSLC 398
Cdd:TIGR01972 308 VLLGIFSFNELGisgAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFMLFAMASL 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 270272223 399 GIPPLACFWSKDEILNDSWLYSPIFAIIASVTAGLTAFYMFRIYLLTFEGHLNVHFQN 456
Cdd:TIGR01972 379 GLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVA 436
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-441 |
6.74e-38 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 147.66 E-value: 6.74e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 2 IIPFVPLPVPMLIGVGLLLFPTATKNlrrmWAF--PSILLLSIVMIFSTNLSIQQINSSSIYQyvwSWTLDNDFSLEFGY 79
Cdd:PRK06589 7 TTPNNLLLSTLLVGALNLTSPFATKK----DSFirNFLLITISIFFFGNILLIDLLFLKGIRA---QFELMDFGNYSIGL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 80 LIDPLTSIMSMLITTVGIMVLIYSDNYMAHD--QGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFw 157
Cdd:PRK06589 80 HLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGH- 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 158 ftrpPAANACQKAfvtnrvgdfglLLGILGFYWITGSFefrdLFEIFNNLIYNNEVNSPFV---------ILCAALLFAG 228
Cdd:PRK06589 159 ----TRNNISLSG-----------GYKYLKILMISALL----LFLPAVILIYTKTGNLDFVsgglfsknqSIILLLMFIY 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 229 AVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIM------NLISLIGIITVLLGATLAL 302
Cdd:PRK06589 220 GIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQrifaefNWLIFIPIVSIFYSSLKAL 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 303 AQKDIKRVLAYSTMSQLGYMMLALGM---GSYRSALFHLITHAYSKALLFLGSGSVihsmetivgYSPDKSQNMVLMGGL 379
Cdd:PRK06589 300 KTDNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDKLHGT 370
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 270272223 380 TKHVPITKTSFLLGTLSLCGIPPLACFWSKDEIL-----NDSWLYSPIFAIIASVTAGLTAFYMFRI 441
Cdd:PRK06589 371 SKSFPLISFIISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKI 437
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-448 |
2.21e-37 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 145.87 E-value: 2.21e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 11 PMLIGVGLLLFPTATKNLRRMWAFPSILLLSIVMIFSTNLSIQqinsssiyqyvwswTLDNdfsLEFGYLIDPLTSIMSM 90
Cdd:PRK07234 12 PFLLGFAIYLLPKLDRNLALGMAIVSAVYALGLVASMVPLELT--------------LLDN---FGVTLRADALSGYFIL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 91 LITTVGIMVLIYSdnyMAHDQGylRFFAymsFFSTSMLGLV----TSSNLIQIYIFWELVGMCSYLLIGFWFTRPPAANA 166
Cdd:PRK07234 75 TNALVTLAVIFYC---WESAKT--RFFY---AQLLILHGSVnaafVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVG 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 167 CQKAFVTNRVGDFgLLLGILGFYWITGSFEFRDLFEIfnnliynnevnSPFVIlcaALLFAGAVAKSAQFPLHVWLPDAM 246
Cdd:PRK07234 147 LRYLFYSNVAMLF-YLIGAVLVYQANGTFAFSGLATA-----------DPEAF---ALIALGLLVKGGIFVSGLWLPLTH 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 247 EGPTPISALIHAATMVAAGIFLVARLLplfIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLAL 326
Cdd:PRK07234 212 SEAEPPVSALLSGVVVKAGVFPLVRCA---LDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAP 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 327 GMGsyrsALFHLiTHAYSKALLFLGSGsVIHSMETivgySPDKSQnmvlMGGLTKHVPITktsflLGTLSLCGIPPLACF 406
Cdd:PRK07234 289 LVG----GLYAL-AHGLVKSTLFLCAG-ALPSRNF----TELISQ----MLGIGKWIPLT-----MASFSIAGFPLLAGF 349
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 270272223 407 WSKDEILndsWLYSPIFAIIASVTAGLTAFYMFRIYLLTFEG 448
Cdd:PRK07234 350 VSKVLTL---KNLLPWQAIALNLAAVGTAASFWKFIFLPFSA 388
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
12-409 |
1.68e-36 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 145.64 E-value: 1.68e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 12 MLIGVGLLLFPTATK---NLRRMWAFPSIL-LLSIVMIFSTNLSIQQINSSSIYQYVWSWTLDNDFSLEfgylIDPLTSI 87
Cdd:PRK08667 6 FLGAILLLLAAAVIPlvfRHKRKRVWQSVLwLVIAIALLLFAGSLQLFTGNPLDIPLWGIAPGLDITFH----IDRLAAF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 88 MSMLITTVGIMVLIYSDNYMAHDQGYLR---FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPPAA 164
Cdd:PRK08667 82 FIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 165 NACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLfeifnnliynnEVNSPFVILCAALLFAGAVAKSAQFPLHVWLPD 244
Cdd:PRK08667 162 RAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPL-----------GASAGILSLVFLLLFLGFGIKAGIIPFHKWLPY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 245 AMEG-PTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMM 323
Cdd:PRK08667 231 AHPAsPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIIL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 324 LALG--------------MGSYRSALFHLITHAYSKALLFLGSGSVIHSMETivgyspdksQNMVLMGGLTKHVPITKTS 389
Cdd:PRK08667 311 MGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHATGT---------RNIEKMGGLVKLMPYTSAL 381
|
410 420
....*....|....*....|
gi 270272223 390 FLLGTLSLCGIPPLACFWSK 409
Cdd:PRK08667 382 FLVGAVSIAALPPFNGFASE 401
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
73-446 |
8.85e-36 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 141.98 E-value: 8.85e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 73 FSLEFGYLIDPLTSIMSMLITTvgIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYL 152
Cdd:MTH00095 37 LSLKFNFYFNSLLFSLILLLVT--LSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 153 LIGFWFTrppaANACQKA---FVTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnnliynnevnSPFVILcaaLLFAGA 229
Cdd:MTH00095 115 LVLFYNN----WDSNSGAmntALTNRIGDFFIFLFFSGFIFSSYYFFSFSFF-------------SSSMIL---MLLLTS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 230 VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIpYIMNLISLIGIITVLLGATLALAQKDIKR 309
Cdd:MTH00095 175 FTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEEDMKK 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 310 VLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMetivgYSpdkSQNMVLMGGLTKHVPITKTS 389
Cdd:MTH00095 254 VVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSN-----FG---QQDGRNYSNNGNLPMFIQLQ 325
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 270272223 390 FLLGTLSLCGIPPLACFWSKDEILNDSWL--YSPIFAIIASVTAGLTAFYMFRIYLLTF 446
Cdd:MTH00095 326 LLVTLFCLCGLMFTSGMVSKELILELFFFnnYMIFFSLMFFFSVFLTFGYSYRLWKSFF 384
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
80-408 |
1.49e-35 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 140.84 E-value: 1.49e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 80 LIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQ-------GYLRFFAYM-SFFSTSMLGLVTSSNLIQIYIFWELVGMCSY 151
Cdd:PRK06458 66 FIDDLNVFFLALIGVVGFLTSLYSIGYMRHEVehgelspVTLRLYYGMyQLFLFTMLLALTSNNLGLMWVAIEATTLSSA 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 152 LLIGFWFTRPpAANACQKAFVTNRVG-DFGLLLGILGFYWITGSFEFRDLFEIFNNLI-YNNEVNSPFVILCAALLFAGA 229
Cdd:PRK06458 146 LLVGIYRTRA-SLEAAWKYIIICSVGvAFALFGTILVYANAATVMGDGEMAILWTELLkHASLLDPTLMKLAFVFLLIGF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 230 VAKSAQFPLHVWLPDA-MEGPTPISALihaatmvaagifLVARLLP--LFIVIPYIM------------NLISLIGIITV 294
Cdd:PRK06458 225 GTKVGLFPMHAWLPDAhSEAPSPVSAL------------LSGVLLNvaLYAVLRYYIlidaaigsdfpgRLLLIFGLLSV 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 295 LLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVIHSMETivgyspdksQ 371
Cdd:PRK06458 293 LVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKYGT---------R 363
|
330 340 350
....*....|....*....|....*....|....*..
gi 270272223 372 NMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWS 408
Cdd:PRK06458 364 DINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFIS 400
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
81-448 |
3.56e-33 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 133.74 E-value: 3.56e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 81 IDPLTSIMSMLITTVGIMVLIYSDNYMAHD--QGYLRFFAYMSFFSTsmlGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 158
Cdd:PRK08377 76 IGPFAALFVLIIAIVSFIMSIFSLKAVEVEpiDKYAMLFLLLMLGAT---GMIATGDIFNLFVFMEITAITAYALTAYNK 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 159 TRPpAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNliynneVNSPFVILCAALLFAGAVAKSAQFPL 238
Cdd:PRK08377 153 TGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGT------IDPTVAQVGLALLIFGLAVEAELFPL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 239 HVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLPLFIVIP---YIMNLISLIGIITVLLGATLALAQKDIKRVLAYS 314
Cdd:PRK08377 226 NAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANgwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYS 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 315 TMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVIHSMetivgyspdKSQNMVLMGGLTKHVPITKTSFL 391
Cdd:PRK08377 305 SIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALALT 375
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 270272223 392 LGTLSLCGIPPLACFWSKDEIL----NDSWLYSPIFAIIASVtagLTAFYMFR-IYLLTFEG 448
Cdd:PRK08377 376 IGALSTVGIPLFNVFWSKFRIIlaglSAGYTWPVALVLGASV---VEAVYYFRlIHTMWFKG 434
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
2-465 |
3.85e-32 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 130.45 E-value: 3.85e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 2 IIPFVPLPVPMLIGVGLLLFPTATKNLRRM----WAFPSILLLSIVMIFSTNLSIQqinsssiyqyvwswtlDNDFSLEF 77
Cdd:TIGR01770 1 LIAILPEIILLLGAFILLLYGLFYSRKKRNplllKNLSYIVLLSALVSLFLTLQYA----------------AYLFTGFS 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 78 GYLIDPLTSIMSMLITTVGIMVLIYSDNYM-AHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGF 156
Cdd:TIGR01770 65 FFIVDNFALLIKLILLLSTLLTFFFALSYLsKEKINKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGL 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 157 WFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNevnsPFVILCAALLFAGAVAKSAQF 236
Cdd:TIGR01770 145 KRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNI----SLLLLGIVLILVGLLFKLSAV 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 237 PLHVWLPDAMEG-PTPISALIHAATMVAA-GIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYS 314
Cdd:TIGR01770 221 PFHMWVPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYS 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 315 TMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFlgsgSVIHSMETIVGYSPDksqNMVLMGGLTKHVPITKTSFL 391
Cdd:TIGR01770 301 SISHVGYILIGLLAGTlegIKAVLFYIFIYALMSLGAF----GVLSLLRSYKDEWIE---YISDFAGLFKTNPILAILIL 373
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 270272223 392 LGTLSLCGIPPLACFWSKDEIL-----NDSWLyspiFAIIASVTAGLTAFYMFRIYLLTFEGHLNVHFQNFSGNQNTSL 465
Cdd:TIGR01770 374 IFMFSLAGIPPLAGFFGKFYVFfallkSGLYW----LAVIAVLTSVIGAFYYLRVVKVMYFDKPERRIPSNPQSKAQSL 448
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-448 |
3.37e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 125.06 E-value: 3.37e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 6 VPLPVPMLIGVgLLLFPTATKNLRRMWAFPSILLLSIVMIFstnLSIQQINSSSIYQYVWSWtlDNDFSLEFgyLIDPLT 85
Cdd:PRK07691 8 LPILIPVITAI-LLIFLGKRPIIQRYVALIGSLLTLVAAII---LVANVYKHGIQTLELGNW--KAPFGIVF--VADMFA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 86 SIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPPAAN 165
Cdd:PRK07691 80 ALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 166 ACqKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLiynNEVNSPFVILCAALLFAGAVAKSAQFPLHVWLPDA 245
Cdd:PRK07691 160 SI-KYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAEL---SAGQTGLITVVAILFLFVFATKAGLFPLYFWLPGS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 246 MEGP-TPISALIhAATMVAAGIFLVARLLPLFIV--IPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYM 322
Cdd:PRK07691 236 YYAPpIAIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVI 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 323 MLALGMG---SYRSALFHLITHAYSKALLFLGSGSVIHsmetIVGYSPDKSqnmvlMGGLTKHVPITKTSFLLGTLSLCG 399
Cdd:PRK07691 315 LVGVAMMtesGMIGAIYYLIHDMIVKAALFLLIGIMIK----ITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSLAG 385
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 270272223 400 IPPLACFWSKDEILNDSWLY-SPIFAIIASVTAGLTAFYMFRIYLLTFEG 448
Cdd:PRK07691 386 IPPLSGFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWG 435
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
2-409 |
6.00e-29 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 122.31 E-value: 6.00e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 2 IIPFVPLPVPMLIGVGLLLFptaTKNLRRMWAFPSILLLSIVMIFSTnlsiqqinSSSIYQYVwSWtLDNDFSLefgYLI 81
Cdd:PRK12668 2 MLDFLPPALVFIAGALLVPF---LPGRARKALLLLAPVLAVLAVLTV--------PEGTYLTV-TF-LGFDLVL---GRV 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 82 DPLTSIMSMLITTVGIMVLIYSdnymAHDQGYLRFFAYMSFFSTSmLGLVTSSNLIQIYIFWELVGMCSYLLIgfWFTRP 161
Cdd:PRK12668 66 DKLSRVFGLIFGIMAFIGVIYA----LHVKDPGQHVAALLYVGSA-LGAVFAGDLLTLFVFWELMAFTSTFLV--WARGT 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 162 PAA-NACQKAFVTNRVGDFGLLLGILGFYWITGSFEFrDLFEIFNNLiynnevnspfvilCAALLFAGAVAKSAQFPLHV 240
Cdd:PRK12668 139 KAAvRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLGGT-------------AAWLILIGFGVNAAFPPLHA 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 241 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYImnlisliGIITVLLGATLALAQKDIKRVLAYSTMSQLG 320
Cdd:PRK12668 205 WLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELLIYI-------GAAMAVYGVFFALLENDLRRLLSYHIVSQVG 277
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 321 YMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVIHSMETIvgyspdksqNMVLMGGLTKHVPITKTSFLLGTLSL 397
Cdd:PRK12668 278 YMVAGIGIGTalaINGAVAHAFNHILYKGLLFMSAGAVLYRTGTE---------KLTELGGLYRSMPLTALFCLVGALSI 348
|
410
....*....|..
gi 270272223 398 CGIPPLACFWSK 409
Cdd:PRK12668 349 SAFPLFSGFVSK 360
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
81-378 |
2.68e-28 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 119.37 E-value: 2.68e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 81 IDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMSF--FSTSMLGLvtSSNLIQIYIFWELVGMCSYLLIGFWF 158
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGATLLGLTLLIGLNK 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 159 TRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEfrdlfeifnnlIYNNEVNSPFVILCAA-------LLFAGAVA 231
Cdd:PRK08601 148 GWKVAREAAKISGMLFLISWLALALAIVWLFIATGEWQ-----------LTSVLSNENLAQLGTWektginlLLILAVMI 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 232 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLFI-VIPYIMNLIslIGIITVLLGATLALAQKDIKRV 310
Cdd:PRK08601 217 PAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHdDIAQILLLI--FASISVLIGTGISLVQVDYKRQ 293
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 270272223 311 LAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMEtIVGYSPDKSQNMVLMGG 378
Cdd:PRK08601 294 LVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN-IVKQANEKKSYLWIVVG 360
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
3-446 |
3.27e-27 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 115.82 E-value: 3.27e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 3 IPFVPLPVPMLIGVGLLLFPTATKnLRRMWAFPSILLLSIVMIFstnLSIQQINSSSIyqyvwswTLD-NDFSLEFG--Y 79
Cdd:PRK12663 5 LLILPMLLPLLCGLVLVFLRNRDR-LQRYLAIGTLTILTLISLA---LLIYVQRHGPI-------TLDfGGWLPPFGiqF 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 80 LIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFT 159
Cdd:PRK12663 74 TGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 160 RPPAANACQKAFVtNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLiynnEVNSPFVILCAALLFAGAVaKSAQFPLH 239
Cdd:PRK12663 154 REQLRGAIKYVVL-NLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDM----GDTATLTTIALLFLLAFGM-KAALFPFM 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 240 vWLPDAMEGP-TPISALIhAATMVAAGIFLVARLLP-LFIVIPYIMN-LISLIGIITVLLGATLALAQKDIKRVLAYSTM 316
Cdd:PRK12663 228 -WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHpLLATMAAITMVIGALGALAYKDIRRIAGYQVI 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 317 SQLGYMMLALGMGSY---RSALFHLITHAYSKALLFLGSGSVIHsmetIVGYSPDKSqnmvlMGGLTKHVPITKTSFLLG 393
Cdd:PRK12663 306 SSIGFILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLVR----LTGYRSLQY-----LGGLYRKEPLFGALFLIL 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 270272223 394 TLSLCGIPPLACFWSKDEIL-----NDSWlyspIFAIIASVTAGLTAFYMFRIYLLTF 446
Cdd:PRK12663 377 IFAIGGLPPFSGFWGKVLLVqgaldNGAY----ILLALMLITSLITMYSLFRIFFLAY 430
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-441 |
3.26e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 109.82 E-value: 3.26e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 3 IPFVPLPVPMLIGVGLLLfptaTKNLRRMWAFPSILLLsIVMIFSTNLSIQQINSSSIYQYVWSWTLDNDFSLEfgylID 82
Cdd:PRK12662 5 LPILQVIIPLLSAVVCAL----LKNRKLVKIISCIVVA-VSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELR----VD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 83 PLTSIMSMLITTVGIMVLIYS---DNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFT 159
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYGiypNRKEISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRD 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 160 RppaaNACQKAF---VTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNspfviLCAALLFAGAVAKSAQF 236
Cdd:PRK12662 156 K----KALVAAFeylIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQ-----IGVLFIMVGLFIKAALF 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 237 PLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL------PLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKR 309
Cdd:PRK12662 227 PFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKR 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 310 VLAYSTMSQLGYMMLALGMGSYR---SALFHLITHAYSKALLFLGSGSVIHSMETIvgyspdksqNMVLMGGLTKHVPIT 386
Cdd:PRK12662 306 IFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFGTT---------KLEDCLNLWKSMPKI 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 270272223 387 KTSFLLGTLSLCGIPPLACFWSKDEILnDSWLYSPIFA--IIASVTAGLTAFYMFRI 441
Cdd:PRK12662 377 TLAFVLLSLSLIGMPPTSGFVAKWYIL-DAFIKSNAWIglVVLLVGSGLSVIYVWKI 432
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
37-470 |
2.43e-24 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 107.40 E-value: 2.43e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 37 ILLLSIVMIFSTNLSIQQINSS------------SIYQYVWSWTLDNDFSLEFGYLIDPLTSIMSMLITTVGIMVLIYSD 104
Cdd:CHL00049 21 ILIFGLILLLMIDLTSDQKDIPwlyfisstslvmSITALLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSV 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 105 NYMAHDQGYLRFFayMSFFSTSMLG---LVTSSNLIQIYIFWELVGMCSYLLIGFwftrppaanaCQKAFVTNRVGDFGL 181
Cdd:CHL00049 101 EYIECTEMAITEF--LLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY----------TKKDVRSNEATMKYL 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 182 LLG-----IL--GFYWITG-SFEFRDLFEIFNNLIYNNEVNSPFVILCAALLFAGAVAKSAQFPLHVWLPDAMEG-PTPI 252
Cdd:CHL00049 169 LMGgasssILvyGFSWLYGlSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPV 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 253 SALIhAATMVAAGIFLVARLLPlfIVIPYIMN----LISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGM 328
Cdd:CHL00049 249 VAFL-SVTSKVAASALATRIFD--IPFYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIV 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 329 GSYRSALFHLITHAYSKALLFLGSGSVIHSMETIVGyspdkSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWS 408
Cdd:CHL00049 326 GDSNDGYASMITYMLFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFG 400
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 270272223 409 KDEILNDSW---LYSPIFaiIASVTAGLTAFYMFRIYLLTFEGH---LNVHFQNFSGNQNTSLYSISL 470
Cdd:CHL00049 401 KLYLFWCGWqagLYFLVS--IGLLTSVISIYYYLKIIKLLMTGRnqeITPYVRNYRRSPLRSNNSIEL 466
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
36-446 |
5.43e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 106.50 E-value: 5.43e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 36 SILLLSIVMIFSTNLSIQQINSSSIYQYVWSWtldNDFSLEFGYLIDPLTS-IMSMLITtVGIMVLIYSDNYMAHDQGYL 114
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVSLNFLSF---GGYSWLINFDFDYVTFgVLLMLLI-CFYYSLLYTFHYFGGSYASF 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 115 RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTrPPAANACQKAFVTNRVGDFGLLLgILGFYWITGS 194
Cdd:MTH00063 77 LLNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFL-LIGLSCWGGS 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 195 FEFRDLFEIFnnliynnevnspFVILcaallfagavAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlLP 274
Cdd:MTH00063 155 GSFLCCLFFF------------LIVF----------TKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YD 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 275 LFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGS 354
Cdd:MTH00063 212 YLLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGD 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 355 VihsmetIVGYSPDKSQNMVLMGGLTKHVPITKTSFLLgtLSLCGIPPLACFWSKDEILND--SWLYSPIFAIIASVTAG 432
Cdd:MTH00063 292 V------MSGSGGSQSSNCVYSSILYGSWNLFYLFLLV--LGLSGVPFIGVFFSKHFLLSSfsSVVFNVSLLLVVILCVF 363
|
410
....*....|....
gi 270272223 433 LTAFYMFRIYLLTF 446
Cdd:MTH00063 364 LSYLYSFRLCLILF 377
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
116-456 |
4.25e-22 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 100.54 E-value: 4.25e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 116 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWfTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSF 195
Cdd:PRK06473 109 YYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGAS 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 196 EFRdlfeiFNNLIYNNEVNSPFVILCAALLFAGAVaKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARL-L 273
Cdd:PRK06473 188 SFD-----YEPLRSHTLPLSTQLLLLAPILVGFGI-KIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRFgV 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 274 PLFI-VIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLF 349
Cdd:PRK06473 261 GLFPeAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQMISHGLISALLF 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 350 LGSGSVihsmetivgYSPDKSQNMVLMGGL---TKHVPITKTSFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAII 426
Cdd:PRK06473 341 LLVGVV---------YKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLL 411
|
330 340 350
....*....|....*....|....*....|
gi 270272223 427 ASVTAGLTAFYMFRIYLLTFEGHLNVHFQN 456
Cdd:PRK06473 412 CMIGTGLTAVYFLLLVNRVFFGRLTAELSN 441
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
8-443 |
6.46e-22 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 99.79 E-value: 6.46e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 8 LPVPMLIGVGLLLFPTATKNLRRMWAFPSILLLSIVMIFSTNLSIqqinSSSIYQYV----WSWTLDNDFSLEFGYLIDP 83
Cdd:PRK07363 8 LPILGAIIIGFFPGNLPSARLRQITLVFAVLVLAWSLFLLTQFDL----SDPGMQFQeylpWNEPLGLSYSLGVDGLSLP 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 84 LTSIMSMLIttvgiMVLIYSDNYMAHDQGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPpA 163
Cdd:PRK07363 84 LLVLNSLLT-----WIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-R 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 164 ANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRdlfeiFNNLIYNNEVNSPFVILCAALLFaGAVAKSAQFPLHVWLP 243
Cdd:PRK07363 156 GYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFD-----YDAISTQNLSLNTQLILLTGLLL-GFGIKIPLVPLHTWLP 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 244 DAMEGPTPISALIHAATMVAAGIFLVARL-LPLFiviPYIMNLIS----LIGIITVLLGATLALAQKDIKRVLAYSTMSQ 318
Cdd:PRK07363 230 DAYTEASPAVAILLGGVLAKLGTYGLLRFgLQLF---PQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMVAYSSIGH 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 319 LGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSVihsmETIVGyspdkSQNMVLMGGLTKHV---PITKTSFLL 392
Cdd:PRK07363 307 MGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVGIV----ERKVG-----TRDLDVLNGLMNPIrglPLTSALLVL 377
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 270272223 393 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIASVTAGLTAFYmFRIYL 443
Cdd:PRK07363 378 AGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY-FVILL 427
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
36-484 |
8.68e-21 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 95.85 E-value: 8.68e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 36 SILLLSIVMIFSTNLsIQQINSSSIYQYVWSWTLDNDFSLEFGYLIdpltsIMSMLITTVGIMVLIYSDNYMAHDQGYLR 115
Cdd:MTH00199 25 STLKLSIGVLLLIGL-IVELNSLNLFQSDKVLDGTNGLLLTNSWII-----ISKIIIIIGSISILLMGSGETILSEGGQS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 116 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSF 195
Cdd:MTH00199 99 SPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGET 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 196 EFRDlfeifNNLIYNNEVNSPFVILcaALLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFlvarllP 274
Cdd:MTH00199 179 SIQG-----INSILTGDVGKILITI--SLLFKLSAA-----PFHMWAPDVYEGaPTITTALL--ATVPKIGVF------S 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 275 LFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHayskALLFLG 351
Cdd:MTH00199 239 ILVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESiqaSLIYMIIY----VIMSIC 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 352 SGSVIHSMETIVGYspdksqnMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEIL-----NDSWLYSpIFAII 426
Cdd:MTH00199 315 SFSIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLILlsgvsSGYYLIC-IIAVL 386
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 270272223 427 ASVTAGLtaFYMFRIYLLTFEGHlnvhfqnfsgnqntslYSISLWGKRCSKRINKNFR 484
Cdd:MTH00199 387 SSVIAGV--YYVRVVQIIYFQAD----------------YSILIWQKVLKKEERLDLS 426
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
126-432 |
1.72e-20 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 93.94 E-value: 1.72e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 126 SMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFN 205
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 206 NLIYNNEVNSPF--VILCAALLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLvarllpLFIVIPYI 282
Cdd:MTH00196 85 SGQSFSSVSVPIgyLLIIVALLFKLSVA-----PFHMWAPDVYEGaPTKTTALL--AIVPKLGIFS------ILVSIGLN 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 283 MNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLgsgsvihsm 359
Cdd:MTH00196 152 VNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESiqaSLVYLFIYIIMSICVFS--------- 222
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 270272223 360 eTIVGYSPDKSQnMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEIL----NDSWLYSPIFAIIASVTAG 432
Cdd:MTH00196 223 -IILALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILlsgvVYQYYLIFLLAVFCSVIAG 297
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
219-446 |
1.39e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 92.72 E-value: 1.39e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 219 ILCAALLFAGAVaKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLG 297
Cdd:PRK12665 210 ALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 298 ATLALAQKDIKRVLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVihsmETIVGyspdkSQNMV 374
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVGLI----ERQAG-----SSSLR 358
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 270272223 375 LMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEIL-----NDSWLysPIFAIIASV-TAGLTAFYMFRIYLLTF 446
Cdd:PRK12665 359 RLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeagaeDGTWL--AWALVAGGVvTSLLTLYAVARVWTKAF 434
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
79-409 |
3.07e-19 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 91.25 E-value: 3.07e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 79 YLIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLrFFAYMSFFSTSmlGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 158
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYV-FLMLMGLASVS--AIVLADDIFNLYVFFEIAAIVQVGLVIASG 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 159 TRppaaNACQKAFVTNRVGDFG---LLLGILGFYWITGSFEFRDlfeIFNNLIYNneVNSPFVILCAALLFAGAVAKSAQ 235
Cdd:PRK06277 145 TE----EAYKAALKYMILGNVAgsiLLLGIGFLLASTGTLNITD---IHNALLVN--PTSPVIYGGLLLLIFGLLYGSGL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 236 FPLHVWLPDAMEGPTP-ISALIHAAT-MVAAGIFLVarLLPLFIVIPYIMN---LISLIGIITVLLGATLALAQKDIKRV 310
Cdd:PRK06277 216 PPFHTIKSDIYAKAKPfGSALLQTFSkFVLVALMLV--IFKLFGGLSYFPSaqgVLIALSVLAMVFGVVMALLQTDYKRL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 311 LAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSVihsmetivgYSPDKSQNMVLMGGLTKHVPITK 387
Cdd:PRK06277 294 LAYHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVA 364
|
330 340
....*....|....*....|..
gi 270272223 388 TSFLLGTLSLCGIPPLACFWSK 409
Cdd:PRK06277 365 FMVLCAKLAISGVPPFNGFQSK 386
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
79-446 |
6.56e-19 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 90.20 E-value: 6.56e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 79 YLIDPLtSIMSMLITTVG-IMVLIYSDNYMAH-------DQGYLRFFaYMSFfstSMLGLVT-----SSNLIQIYIFWEL 145
Cdd:PRK08676 59 LFIDHL-GIFVVLIASVVfILAALYARGYVDHllsngelDPENLKVF-YLGF---NLLLSVItfaffSDNLALFWIFAEL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 146 VGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLlGILGFYWIT------GSFEFRDLFEIFNNLiynnevnSPFVI 219
Cdd:PRK08676 134 TTVFSAMLIAILSARENIDAALKYIFIASTAMIFAFI-GLIFLFSLTrqalgtGTLNWTELAAHASLL-------SPSVL 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 220 LCAALL-FAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFI---VIPYIMNLISLIGIITV 294
Cdd:PRK08676 206 GASFLFiFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGLGIFSI 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 295 LLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGsVIHSMetivgYSPDKSQ 371
Cdd:PRK08676 285 AVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ-----YRSDRFD 358
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 270272223 372 NmvlMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIASVTAGLTAFYMFRIYLLTF 446
Cdd:PRK08676 359 R---IFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFLLKAF 430
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
58-409 |
1.50e-18 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 89.34 E-value: 1.50e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 58 SSIYQYVWSWTLDNDFSLEFGYLIDPLTSIMSMLITTVGIMVLIYSDNYMahDQGYLRFFAYMSFFSTSMLG---LVTSS 134
Cdd:PRK02504 53 AALVALALQWDNPNPISFLGSFNADNLSIAFRAIIALSTLVTLLMSWRYV--EQSGTPLGEFAAILLTATLGgmfLSGAT 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 135 NLIQIYIFWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEfrDLFEIFNNLIynnevN 214
Cdd:PRK02504 131 ELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGST--QLSAIALALI-----T 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 215 SPFVILCAALLF--AGAVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLVARLLPLfiVIPYIMN----LIS 287
Cdd:PRK02504 204 SPSLGLALALVFviAGIAFKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLLVT--AFPSFDEqwklLFT 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 288 LIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGS---YRSALFHLITH------AYSKALLF-LGSGSvih 357
Cdd:PRK02504 281 ALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAYlfmnlgAFACVILFsLRTGT--- 357
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 270272223 358 smETIVGYSpdksqnmvlmgGLTKHVPITKTSFLLGTLSLCGIPPLACFWSK 409
Cdd:PRK02504 358 --DQISDYA-----------GLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
131-448 |
3.00e-18 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 88.73 E-value: 3.00e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 131 VTSSNLIQIYIFWELVGMCSYLLIGfwftrppaanaCQKA----FVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNN 206
Cdd:PRK08042 107 VIASNLGMFVVMAEIMALCAVFLTG-----------NSKEgklwFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQ 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 207 LIYNNEVNSPFVILCAalLFAGAVaksaqfPLHVWLPDAMEGPTPISALIHAATMVAAGIF------LVARLLPLFIVIp 280
Cdd:PRK08042 176 LPLGSDIWLLGVIGFG--LLAGII------PLHGWVPQAHANASAPAAALFSTVVMKIGLLgiltlsLLGGNAPLWWGV- 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 281 yimnLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMG--------------SYRSALFHLITHAYSKA 346
Cdd:PRK08042 247 ----ALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKS 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 347 LLFLGSGSVIHSmetiVGYspdksQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEI------LNDSWLY- 419
Cdd:PRK08042 323 VLFLGAGSVWFR----TGH-----RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFv 393
|
330 340 350
....*....|....*....|....*....|...
gi 270272223 420 ----SPIFAIIASVTAGLTAFYMFRIYLLTFEG 448
Cdd:PRK08042 394 arllGPLLAVGLAITGALAVMCMAKVYGVTFLG 426
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
116-445 |
7.17e-18 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 87.39 E-value: 7.17e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 116 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW--FTRPPAANacqKAFVTNRVGDFGLLLGILGFYWITG 193
Cdd:PRK12561 89 FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWggQKRLYAAT---KFILYTALASIFILVAGLALALSGD 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 194 SFEFrDLFEIfnnliYNNEVNSPFVILC-AALLFAGAVaKSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFLV-- 269
Cdd:PRK12561 166 TFTF-DLAEL-----GAKSYPLALELLLyAGFLIAFGV-KLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLKmg 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 270 --------ARLLPLFIVipYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMlaLGMGSYRS-----ALF 336
Cdd:PRK12561 232 gyalirfnVQMLPDAHV--YFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAML 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 337 HLITHAYSKALLFLGSGsvihsmetiVGYSPDKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEI---L 413
Cdd:PRK12561 308 QMISHGLIAAALFFLTG---------VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgI 378
|
330 340 350
....*....|....*....|....*....|....*.
gi 270272223 414 NDSWLYSPIFAIIASVTAG----LTAfymfrIYLLT 445
Cdd:PRK12561 379 TSSDVYSSTFRTITILLAAvgliLTP-----IYLLS 409
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
67-117 |
4.28e-14 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 66.68 E-value: 4.28e-14
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 270272223 67 WTLDNDFSLEFGYLIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYLRFF 117
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
12-460 |
6.59e-13 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 71.51 E-value: 6.59e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 12 MLIGVGLLLFPTATKNLRRMWAFPSILLLSIVMIFSTNLSIQQINSSSIYQyvwswtldndfsleFGYLIDPLTSIMSML 91
Cdd:MTH00206 2 ILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSN--------------LYLSYDPLSSPLVIL 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 92 ITTVGIMVLIYSDNYMaHDQGYLRFFAYMSFFSTSMLGLV---TSSNLIQIYIFWELVGMCSYLLIGFWFTRPPAANACQ 168
Cdd:MTH00206 68 SCWLLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGY 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 169 KAFVTNRVGDFGLLLGILGFYWITGSFEFrdlfeifnNLIYNNEVNSPFVILCAALLFAGAVAKSAQFPLHVWLPDA-ME 247
Cdd:MTH00206 147 YFLFYTLIGSLPLLIALLFLQNSLGSLSL--------YILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAhVE 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 248 GPTpisalihAATMVAAGIFLVA---RLLPLFIVIPYIMNLISLIGIITVLLGATLA----LAQKDIKRVLAYSTMSQLG 320
Cdd:MTH00206 219 APV-------AGSMVLAGVLLKLggyGMMRIILILGPSTKLSSYFFIILGLWGSIMTssicLRQTDLKSLIAYSSVSHMS 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 321 YMMLALGMG---SYRSALFHLITHAY-SKALLFLGSgsvihsmetiVGYSPDKSQNMVLMGGLTKHVPITKTSFLLGTLS 396
Cdd:MTH00206 292 LVTAGILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQMILPLLSFWWLLFFLA 361
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 270272223 397 LCGIPPLACFWSKDEILNDSWLYSPIFAIIASVTAGLTAFYMFRIYLLTFEGHLNVHFQNFSGN 460
Cdd:MTH00206 362 NLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPS 425
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
140-451 |
2.19e-12 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 70.12 E-value: 2.19e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 140 YIFWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGI-LGFYWITGSFEFRDLfeifnnliYNNEVNSPFV 218
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALaMAFYGDTPTFDMTAL--------AAKDFGLGFQ 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 219 ILC-AALLFAGAVaKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIFLV----------ARLLPlfIVIPYIMNLIS 287
Cdd:PRK02546 213 LLCyAGLLIAYGV-KLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLKmggyallrmnAGMLP--DAHAQFAPLLI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 288 LIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMlaLGMGSYRS-----ALFHLITHAYSKALLFLgsgsvihsmetI 362
Cdd:PRK02546 284 VLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLFF-----------L 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 363 VGYSPDKSQNMVL--MGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEI---LNDSWLYSPIFAII----ASVTAGL 433
Cdd:PRK02546 351 VGATYDRTHTLMLdeMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVfvgFATSDAYTLPFRVVvvflAAVGVIL 430
|
330
....*....|....*...
gi 270272223 434 TAFYMFRIYLLTFEGHLN 451
Cdd:PRK02546 431 TPIYLLSMLREIFFGPEN 448
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
217-441 |
4.85e-12 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 69.12 E-value: 4.85e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 217 FVILCAALLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLplfivipyIMNLISLIGIITVL 295
Cdd:MTH00198 302 YLFITVAILFKLAAA-----PFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTSLVI--------TSKLLLSVAIISLV 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 296 LGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRSaLFHLITHAYSKALLFLGSGSVIHSMETIVGYSPDKSQNMVL 375
Cdd:MTH00198 369 VGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYES-LQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGS 447
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 376 MGG------------LTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEILNDS----WLYS-PIF---AIIASVTAGLTA 435
Cdd:MTH00198 448 FGNynlvrrlvdltiLSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSikiaFSSSlSIYylvALFAIICTCISA 527
|
....*.
gi 270272223 436 FYMFRI 441
Cdd:MTH00198 528 FYYIRI 533
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
86-432 |
1.02e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 67.89 E-value: 1.02e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 86 SIMSMLITTVGIMVLIYSDNYmAHDQGYLRffAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWftrppaAN 165
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY-DHYGKWLS--SLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT------KK 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 166 ACQKAFVTNRVGDFGLLLGILGFYW---ITGSFEFrdlfeifnnliynNEVNSPFVILCAALlfaGAVAKSAQFPLHV-- 240
Cdd:PRK06459 118 NKRPAFVFMAFGELSTVLILAGFAWafiISGTTNF-------------SYLPSPVPLILASF---GFIIKMGMMPFLVse 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 241 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIP--YIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQ 318
Cdd:PRK06459 182 WLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPigYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIEN 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 319 LGYMMLALGM--------GSYR-----SALFHLITHAYSKALLFLGSGSVihSMETIvGYSPDKSQNMVLMGGltkhvpi 385
Cdd:PRK06459 262 NGAILVALGLymvtkqliTSIEhfsliTVILYSFAHSVAKTGLFLSSGLQ--EKQSI-TYSKKIRNRWIELGL------- 331
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 270272223 386 tktsfLLGTLSLCGIPPLACF---WSKDEILNDSWLYSPIFAIIASVTAG 432
Cdd:PRK06459 332 -----TLLASSLSGLLPNIGGvasWLLLESLFMFAYVLHNVISILFIVTG 376
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
87-439 |
2.18e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 66.87 E-value: 2.18e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 87 IMSMLITTVGIMVLIYSDNYMAhdQGYLRFFAYMSFFSTSMLGLVtssNLIQIYIFWELVGMCSYLLIGFWFTRPPAANA 166
Cdd:MTH00226 109 ILTGFIVPCSILISWHSVKYLT--KSFLICMLILEFLLYAVFSVL---DIFMFYILFEGVLIPMYLILGIWGSREEKMQA 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 167 CQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIfNNLIYNNEVNSPFVilcaaLLFAGAVAKSAQFPLHVWLPDA- 245
Cdd:MTH00226 184 AYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQKWIFL-----GIFLAMAVKIPIFPFHIWLPKAh 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 246 MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPYIMNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMML 324
Cdd:MTH00226 258 VEAPVAGSVLLAGILLKLGGYGLVRLSWPILpLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSI 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 325 AL---GMGSYRSALFHLITHAYSKALLFLgsgsvihsMETIVgYSPDKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIP 401
Cdd:MTH00226 338 TLvthDIIGLTGSIFIMLAHGIVSSLLFI--------LVTIL-YDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVP 408
|
330 340 350
....*....|....*....|....*....|....*...
gi 270272223 402 PLACFWSKDEILNDSWLYSPIFAIIASVTAGLTAFYMF 439
Cdd:MTH00226 409 PSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-436 |
3.58e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 66.03 E-value: 3.58e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 1 WIIpfVPLPVPMLIGVGLLLFPTATKNLRRMWAFPSILLLSIVMIfstnLSIQQINSSSIYQYvwswtLDNDFSLEFG-- 78
Cdd:PRK12666 7 LII--LPILLPLLTAALLLLLDERRRRLKRAISLASTLLLLAVAV----ALLASAAAGGIGVY-----LLGNWPAPFGiv 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 79 YLIDPLTSIMSMLITTVGIMVLIYSdnyMAHDQGYLRFF-AYMSFFstsMLGL----VTSsNLIQIYIFWELVGMCSY-- 151
Cdd:PRK12666 76 LVLDRLSALMLLLTALLALAALLYA---LAGWDRAGPHFhALFQFQ---LMGLngafLTG-DLFNLFVFFEVLLAASYgl 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 152 LLIGfwfTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLiynNEVNSPFVILCAALLFAGAVA 231
Cdd:PRK12666 149 LLHG---SGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQL---PAADRALLEAGAALLLVVFLI 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 232 KSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLLPLF------IVIPYIMNLISLIGIITVLLGATLALAQ 304
Cdd:PRK12666 223 KAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLfgpeagASAGFGQDWLLPGGLATLAFGAIGVLAA 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 305 KDIKRVLAYSTMSQLGYMMLALGMGSYR---SALFHLITHAYSKALLFL----------GSGSVIHSMETIvgYSPDKSQ 371
Cdd:PRK12666 301 QRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrgAAADRLAVTPEL--YDLDEEE 378
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 270272223 372 NMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSK----DEILNDSWLYSP---IFAIIASVTAGLTAF 436
Cdd:PRK12666 379 EEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKfallQALLNPPGAGAAwwlWALVLLSGLAALIAL 450
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
127-443 |
5.00e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 65.46 E-value: 5.00e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 127 MLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnN 206
Cdd:MTH00217 122 LMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC----C 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 207 LIYNNEVNSpFVILcaaLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPYIMN 284
Cdd:MTH00217 198 LKIEKELQY-FIFL---GFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLpEASEYFSP 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 285 LISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLG------------------YMMLALGMGSyrSALFHLITHAYSKa 346
Cdd:MTH00217 274 LIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGlvtlgifshtiqglvaaiFLMLAHGLVS--SALFIAVTFLYER- 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 347 llflgsgsviHSMETIVGYSpdksqnmvlmgGLTKHVPITKTSFLLGTLSLCGIpPLAC-FWSKDEILNDSWLYSPIFAI 425
Cdd:MTH00217 351 ----------HHTRLIKYYR-----------GMVITMPLFGILMLLLVLANASI-PLSCnFVGEFLSLLAAFEYSYIVGV 408
|
330
....*....|....*...
gi 270272223 426 IASVTAGLTAFYmfRIYL 443
Cdd:MTH00217 409 LASLGMVLSAGY--SIYL 424
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
127-405 |
1.00e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 64.70 E-value: 1.00e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 127 MLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLfeifnn 206
Cdd:MTH00204 125 LIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQIL------ 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 207 LIYNNEVNSPFVILcaALLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIP-YIMN 284
Cdd:MTH00204 199 LNIKLPLSIQKWLL--VGFFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASeYFAP 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 285 LISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLAL---GMGSYRSALFHLITHAYSKALLFLGSGSVIHSMET 361
Cdd:MTH00204 277 LIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHT 356
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 270272223 362 -IVGYspdksqnmvlMGGLTKHVPITKTSFLLGTLSLCGIpPLAC 405
Cdd:MTH00204 357 rLIKY----------YRGLTLTMPLFVIIMLVLSLANMGF-PLSC 390
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
121-441 |
1.59e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 63.06 E-value: 1.59e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 121 SFFSTSM-LGL---VTSSNLIQIYIFWELVGMCSYLLIGFWFTrPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFE 196
Cdd:MTH00200 7 PLFILSLgLGTlltFSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWG 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 197 FRDLFEifnnliynnevNSPFVILCAALLFagavaKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagiFLVARLLPLF 276
Cdd:MTH00200 86 ISEMLG-----------PLSETLILLALAL-----KLGLAPGHFWVPDVLQGLSLQTGLI----------LSTWQKLAPF 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 277 IV---IPYIMNLISL--IGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRSALFHLIThayskallflg 351
Cdd:MTH00200 140 ALliqLAPALNSNILllLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLY----------- 208
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 352 sgsVIHSMETIVGYSPDKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEILNDSWLYS-PIFAIIASVT 430
Cdd:MTH00200 209 ---VIITLTVFLLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGlFIYATILLLG 285
|
330
....*....|.
gi 270272223 431 AGLTAFYMFRI 441
Cdd:MTH00200 286 SLLSLFFYLRL 296
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
116-471 |
2.87e-10 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 62.64 E-value: 2.87e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 116 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTrPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSF 195
Cdd:MTH00041 6 LIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFS-PRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 196 efrDLFEIFNNLIYnnevnspfVILCAALLFagavaKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPL 275
Cdd:MTH00041 85 ---SINGPLNTLSS--------IIITLALAL-----KLGLAPCHFWFPDVLQGLPFLQGLI---------IATWQKIAPL 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 276 FIVIPYI----MNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLG 351
Cdd:MTH00041 140 ILLISISnllnSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIG 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 352 SgsvIHSMETIVGyspdksqnmvlMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSK-----DEILNDSWLYSPIFaII 426
Cdd:MTH00041 220 N---NFSLSTLSH-----------LNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCLIQNNSILISIIL-II 284
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 270272223 427 ASVtagLTAFYMFRI----YLLTFEGHLnVHFQNFSGNQNTSLYSISLW 471
Cdd:MTH00041 285 GSL---LSLFFYLRIsfntSLTLFPQHS-ISLFSWRNSGNITVYGVILS 329
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
214-471 |
7.46e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 61.06 E-value: 7.46e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 214 NSPFVILCAALLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMnlisLIGIIT 293
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLC----VISVLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 294 VLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMETIVGYSPDKSQNM 373
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 374 VLMGGLtkhvpitktsfllgtLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIASVTAGLTA--FYMFRIYLLTfeghLN 451
Cdd:MTH00144 235 SIISLL---------------LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISlfFYLSVFFSSF----LS 295
|
250 260
....*....|....*....|
gi 270272223 452 VHFQNFSGNQNTSLYSISLW 471
Cdd:MTH00144 296 SSKSKKSNSSKVLNSSIISL 315
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
37-448 |
3.18e-09 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 59.75 E-value: 3.18e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 37 ILLLSIVMIFSTNLSI--QQINSSSIYQYVWSWTLDNDFSLEFGYLiDPLTSIMSMLITTVGIMVLIYSDNYMAHDQGYL 114
Cdd:MTH00014 12 LLLPLIKYPWSWALTFstLLLLSLFTLLNLYPMSAPYSMFTESLSS-DMLSAPLITLTLWITALMILASFKIFQNNKAPK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 115 RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGS 194
Cdd:MTH00014 91 TFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNS 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 195 FEFrdlfeifnnLIYNNEVNSPFVI-LCAALLFAGAVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL---- 268
Cdd:MTH00014 171 LSM---------LMSSMEPPSIYLMnLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklgg 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 269 --VARLLPLFiviPYIMNLISLIGIITVLLGATLA----LAQKDIKRVLAYSTMSQLGYMMLALGMGS---YRSALFHLI 339
Cdd:MTH00014 235 ygLLRMSSLF---MHINKSLSAPFSSISLVGAVITslicIRQPDLKSLIAYSSVGHMGLMTAGIMSNTswgWQGALAMMI 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 340 THAYSKALLFlgsgsVIHSMEtivgYSPDKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEILNDSWLY 419
Cdd:MTH00014 312 AHGLCSSALF-----ALANMT----YETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSS 382
|
410 420
....*....|....*....|....*....
gi 270272223 420 SPIFAIIASVTAGLTAFYMFRIYLLTFEG 448
Cdd:MTH00014 383 SLSTAILLAITSFLAAAYSLFLYTSTQHG 411
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
128-399 |
4.81e-09 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 59.19 E-value: 4.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 128 LGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPPAANACQKAFVTnRVGDFGLLLGIL--GFYwitGSFEFRDLFEIFN 205
Cdd:CHL00011 126 IGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYT-AGGSIFLLIGVLgmGLY---GSNEPTLNFETLA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 206 NLIYNNEVNspfVILCAALLFAGAVaKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVA----------RLLP 274
Cdd:CHL00011 202 NQSYPVALE---ILFYIGFLIAYAV-KLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMgayglirinmELLP 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 275 --LFIVIPYIMnlisLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMlaLGMGSY-----RSALFHLITHAYSKAL 347
Cdd:CHL00011 271 haHSIFSPWLV----IVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGAILQIISHGFIGAA 344
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 270272223 348 LFLgsgsvihsmetIVGYSPDKSQNMVL--MGGLTKHVP---ITKTSFLLGTLSLCG 399
Cdd:CHL00011 345 LFF-----------LAGTSYDRIRLVYLdeMGGIAIPMPkifTMFSSFSMASLALPG 390
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
120-453 |
4.93e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 59.16 E-value: 4.93e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 120 MSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPPAANACQK-AFVTnRVGDFGLLLGILGFYWITGSFEFr 198
Cdd:MTH00068 99 LIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYfLFYT-LAGSLPLLIALLILQNSLGSLSL- 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 199 DLFEIFNNLIYNNEVNSpfvILCAALLFAGAVaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL--------- 268
Cdd:MTH00068 177 ILLELMSPMQLMTYTNK---IWWLACLLAFMV-KMPLYGLHLWLPKAhVEAPI-------AGSMILAAVLLklggygilr 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 269 VARLL-PLFIVIPYIMNLISLIGiitVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAY- 343
Cdd:MTH00068 246 ISILLtPLSKELSYPFIILALWG---VLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLt 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 344 SKALLFLGSGSvihsmetivgYSPDKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIF 423
Cdd:MTH00068 323 SSALFCLANTN----------YERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWT 392
|
330 340 350
....*....|....*....|....*....|
gi 270272223 424 AIIASVTAGLTAFYMFRIYLLTFEGHLNVH 453
Cdd:MTH00068 393 ILITGLGTLITAAYTLYMFLMTQRGPLPNH 422
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
237-445 |
8.44e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 57.91 E-value: 8.44e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 237 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLvarllpLFIVIPYI-MNLISLIGIITVLLGATLALAQKDIKRVLAYST 315
Cdd:MTH00112 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLTL------LLMTSNSLnPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSS 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 316 MSQLGYMMLALGMgSYRSALFHLITHAYSKALLFLgsgsVIHSMETIvgyspdKSQNMVLMggLTKhVPITKTSFLLGTL 395
Cdd:MTH00112 184 IAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTTSTK------TLKDMMTS--WTK-SPTLNTTLMLTLL 249
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 270272223 396 SLCGIPPLACFWSKDEILNDswLYSPIFAIIASVTAGLT----AFYMFRIYLLT 445
Cdd:MTH00112 250 SLAGLPPLTGFMPKWLILQE--LTKQNMTPTATIMAMLSllslFFYLRLTYIST 301
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
79-324 |
1.39e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 57.48 E-value: 1.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 79 YLIDPLTSIMSMLITTVGIMVLIYSDN--------YMAHDQGYLrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCS 150
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 151 YLLIGFWfTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNliynnEVNSPFVILCAALLFAGAV 230
Cdd:PRK06591 152 YVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYLQE-----HTNSRIITIAIGFFLIGAI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 231 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLplFIVIPY------IMNLISLIGIITVLLGATLALAQ 304
Cdd:PRK06591 226 LKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFT--YIIIGYetiktaITNFIRPIALATLIIAPYFAYQA 303
|
250 260
....*....|....*....|
gi 270272223 305 KDIKRVLAYSTMSQLGYMML 324
Cdd:PRK06591 304 KNFKNIIIYSCFTQIGYVFL 323
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
114-456 |
2.90e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 56.89 E-value: 2.90e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 114 LRFFAYMSFFSTSMlglvtssnlIQIYIFWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITG 193
Cdd:MTH00127 103 LQIFLILAFGATEI---------IMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTG 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 194 SFEFrdLFEIFNNLIYNNEVNSPfvILCAALLFAGAVaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 273
Cdd:MTH00127 174 TLSM--LTLQYSQPLQLSSWADK--LWWAGCLLAFLV-KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMM 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 274 ----PLFIVIPYIMNLISLIGIItvlLGATLALAQKDIKRVLAYSTMSQLGYM---MLALGMGSYRSALFHLITHAYSKA 346
Cdd:MTH00127 249 vmldPLTKELSYPFIILALWGII---MTGSICLRQTDLKSLIAYSSVSHMGLVaggILIQTPWGFTGALILMIAHGLTSS 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 347 LLFLGSGSvihsmetivGYSPDKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAII 426
Cdd:MTH00127 326 ALFCLANT---------NYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLAL 396
|
330 340 350
....*....|....*....|....*....|
gi 270272223 427 ASVTAGLTAFYMFRIYLLTFEGHLNVHFQN 456
Cdd:MTH00127 397 TGLGTLITAGYSLYMFLMTQRGPLPDHIIA 426
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
214-470 |
1.17e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 54.29 E-value: 1.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 214 NSPFVILCAALLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIVIPYIMNLISLI--GI 291
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFL---------LATWQKLAPLLILAFNSSSFMGLLicSV 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 292 ITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMETIVGYSPDKSQ 371
Cdd:MTH00197 145 LSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 372 NMVLmggltkhvpitktsFLLGTLSLCGIPPLACFWSKDEILND-SWLYSPIFAIIASVTAGLTAFYMFRIYLLTFEGHL 450
Cdd:MTH00197 225 NLVF--------------LGLSFLSLGGLPPLSGFFLKWLILTSlLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSN 290
|
250 260
....*....|....*....|
gi 270272223 451 NVHFQNFSGNQNTSLYSISL 470
Cdd:MTH00197 291 WMINFLMKINLLYSGLFILL 310
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
74-343 |
5.60e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 52.67 E-value: 5.60e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 74 SLEFGYLIDPLTSIMSMLITTVGIMVLIYSDNYMahdqgYLRFFAYMSFFSTSMLGLVT-----SSNLIQIYIFWELVGM 148
Cdd:MTH00205 48 FISSSFSFDSLSLPLIMLSFWISLLMVLASYKVF-----KSNKNSKLFTVSVIMLLLILilsfsVDNLLLFYITFEASLI 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 149 CSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNevnspfvILCAALLFAG 228
Cdd:MTH00205 123 PTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLF-------LYWIFLMLAF 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 229 AVaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARL-LPLFIVIPYIMNLISLIGIITVLLGATL 300
Cdd:MTH00205 196 LV-KLPMYFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLIRItSMLYKLNSNFSELFFSISLWGGVMTGMI 267
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 270272223 301 ALAQKDIKRVLAYS-------------TMSQLGY-----MMLALGMGSyrSALFHLITHAY 343
Cdd:MTH00205 268 CLRQVDLKSLIAYSsvghmglmvvgvfSNTSWGMngaiiMMVAHGLCS--SGMFALANVNY 326
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
61-448 |
2.62e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 50.22 E-value: 2.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 61 YQYVWSWTLDNDFslefgYLIDPLTSIMSMLITTVGIMVLIYSdnymahdQGYLRFFAYMSFFSTSMLGLV-------TS 133
Cdd:MTH00150 7 YSSFSSYESLSEL-----FSVDSMSSLLISLSLWISGLMMLAS-------QKSVKLRNKSSSFSLLVLLLClilvlafSV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 134 SNLIQIYIFWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFrdlfeIFNNLIYNNEV 213
Cdd:MTH00150 75 SSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM-----LLISSLRKLLS 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 214 NSPFVILCAALLFagaVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFIVIPYIMNLI 286
Cdd:MTH00150 150 SMGLWGLLVFLAF---LVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSLSSSSFSIF 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 287 SL-IGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAY-SKALLFLGSGSvihsmet 361
Cdd:MTH00150 220 LIsLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFcSSGLFCLANYT------- 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 362 ivgYSPDKSQNMVLMGGLTKHVPItkTSFLLGTLSLC--GIPPLACFWSKDEILNDSWLYSPIFAIIASVTAGLTAFYMF 439
Cdd:MTH00150 293 ---YEKVHSRSLFLSKGMLMLYPS--LSLWWFLFCIInmAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSL 367
|
....*....
gi 270272223 440 RIYLLTFEG 448
Cdd:MTH00150 368 YLYTSIQHG 376
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
203-441 |
3.57e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 46.35 E-value: 3.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 203 IFNNLIYNNEVNSPFVILCAALLFagavaKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIvIPYI 282
Cdd:MTH00160 76 ILNMLNLMLFNNISSMLINSSLLL-----KLGAAPFHFWFPEVMEGLSWINCFI---------LMTWQKIAPLIL-LSYL 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 283 M--NLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRSALFHLIthaYSKALLFLgsgsvihsme 360
Cdd:MTH00160 141 InnNFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLI---YSIISLSI---------- 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 361 tIVGYSPDKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEILND-SWLYSPIFAIIASVTAGLTAFYMF 439
Cdd:MTH00160 208 -ILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLlISNNMFFLLFILIMSSLITLYFYL 286
|
..
gi 270272223 440 RI 441
Cdd:MTH00160 287 RI 288
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
208-469 |
6.34e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 45.68 E-value: 6.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 208 IYNNEVNSPFVILCAALLFAGAVAksaqfPLHVWLPDAMEGPTPISALIHA-----ATMvaAGIFLVARLLPLfivipyi 282
Cdd:MTH00070 86 IMNMQTPLPTIMLTIALMMKLGIA-----PFHFWLPEVLQGLDLTTGLILStwqklAPM--ALLIQISHLLNS------- 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 283 mNLISLIGIITVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMgSYRSALFHLITHAYSKALLFLgsgsvihSMETI 362
Cdd:MTH00070 152 -NLLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTF-SPHLTLLNLLIYLIMTSSMFL-------MLMNL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 363 vgyspdKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSK----DEILNDSwlySPIFAIIASVTAGLTAFYM 438
Cdd:MTH00070 223 ------NSTNINKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKwlilQELTKQN---LTTLATLMALSALLSLFFY 293
|
250 260 270
....*....|....*....|....*....|....*
gi 270272223 439 FR----IYLLTFEGHLNVHFQNFSGNQNTSLYSIS 469
Cdd:MTH00070 294 LRlsyaMSLTTSPNTSNSKLYWRFKNKTNNLLSLT 328
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
213-426 |
6.89e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 45.88 E-value: 6.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 213 VNSPFVILCAALLFAGAVAKSAQFPLHVWLPDAMEgptpiSALIHAATMVAAGIFLVARLLPLFIVipYIMNLISLIGII 292
Cdd:PRK12664 138 QNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYP-----AASNFGIIVLSLFTTKVAALVLLLFF--SGEEILLFLGII 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 293 TVLLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMGSYRSA-----LFHLITHAYSKALLFLGSGSVIHSMETIvgysp 367
Cdd:PRK12664 211 TAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVaigilILQIVLSVVYQTLLFMVADSVINRTRKF----- 285
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 270272223 368 dksqNMVLMGGLTKhVPITKTSFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAII 426
Cdd:PRK12664 286 ----NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLY 339
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
222-414 |
2.78e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 43.61 E-value: 2.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 222 AALLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfivipYIMNLISLIGIITVLLGATLA 301
Cdd:MTH00011 91 ALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGLGG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 302 LAQKDIKRVLAYSTMSQLGYMMLALgMGSYRSALFHLITHAYskallflgsgsVIHSMETIVGYSPDKSQNMvlMGGLTK 381
Cdd:MTH00011 166 MNQTQLRPLLAYSSIGHMGWMTMIS-VFSPSMAILYFMTYII-----------ITTPLMLLFAYLNAFSTKF--NSKISS 231
|
170 180 190
....*....|....*....|....*....|...
gi 270272223 382 HVPITKTSFLLGTLSLCGIPPLACFWSKDEILN 414
Cdd:MTH00011 232 MSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIE 264
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
34-345 |
4.24e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 43.22 E-value: 4.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 34 FPSILLLSIVMIFSTNLSIQQINSSSIYQYVWSWTLDNDFSLEFGYL-IDPLTSIMSMLITTVGIMVLIYSDNYMAHDqG 112
Cdd:MTH00163 6 FMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFgLDLLSFGLILLSFWICMLMILSSESVYKKN-N 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 113 YLRFFAYMSFFSTSMLGLV-TSSNLIQIYIFWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWI 191
Cdd:MTH00163 85 YSNLFLFLILFLLIFLLLTfSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 192 TGSFefrdlfeIFNNLIYNNEVNSPFVILcaaLLFAGAVaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL-- 268
Cdd:MTH00163 165 SGSL-------SFFLLNFFGSLNFLWYLS---MILAFLV-KMPMFFVHLWLPKAhVEAPV-------SGSMILAGVLLkl 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 269 ----VARLLPLFIVIPYIMN-LISLIGIITVLLGATLALAQKDIKRVLAYS-------------TMSQLGY-----MMLA 325
Cdd:MTH00163 227 ggygLLRVMSFFSKLGLKFNyIWISISLVGGVIVSLICLRQVDLKSLIAYSsvahmglvlgglmTFSYWGLmgsllMMIG 306
|
330 340
....*....|....*....|
gi 270272223 326 LGMGSyrSALFHLITHAYSK 345
Cdd:MTH00163 307 HGLCS--SGLFCLANIIYER 324
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
32-338 |
3.26e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 40.73 E-value: 3.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 32 WAFpSILLLSIVMIFSTNLSIQQINSSsiyqyvWSwtldndfSLEFGYLIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQ 111
Cdd:MTH00044 24 WPI-SISQSSLISLLSLFLLNNHWSSS------WH-------NLSLSLATDSLSSPLIILSCWLAPLSLLASINHLSNNS 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 112 GYLR--FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFY 189
Cdd:MTH00044 90 PNNQrtFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIY 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 190 WITGSfefrdLFEIFNNLIYNNEVNSPFVILCAALLFAGAVAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIFL 268
Cdd:MTH00044 170 SSSSS-----LSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS-MILAAILLKLGGYG 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 269 VARLLPLFIVIpyIMNLISLIGIITVLLGATLA----LAQKDIKRVLAYSTMSQL----------------GYMMLALGM 328
Cdd:MTH00044 244 LIRLINLFSLP--SANNISFILIVFCCWGALITsiicLRQTDLKALIAYSSVGHMslvaagifsgtnwginGALILMIAH 321
|
330
....*....|
gi 270272223 329 GSYRSALFHL 338
Cdd:MTH00044 322 GLVSSALFCL 331
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
204-458 |
8.23e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 39.12 E-value: 8.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 204 FNNLIYNNEVNSPFVILCAALLFagaVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFIVIpyI 282
Cdd:MTH00094 139 FFSLCYFDFFLSWEMFFILSLSF---MMKFPVYFLHLWLPKAhVEAPTTASMLL-AGLLLKLGTAGFLRILGSLNFV--Y 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 283 MNLISLIGIITVLLGATLALAQKDIKRVLAYST---MSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSM 359
Cdd:MTH00094 213 NNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSvthMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHIS 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 360 etivgyspdKSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIASVTAGLTAFYMF 439
Cdd:MTH00094 293 ---------KSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSL 363
|
250
....*....|....*....
gi 270272223 440 RIYLLTFEGHLNVHFQNFS 458
Cdd:MTH00094 364 FLIVSSFMGKKFSNFNNFN 382
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
68-402 |
8.72e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 39.11 E-value: 8.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 68 TLDNDFSLEFGYLIDPLTSIMSMLITTVGIMVLIYSDNYMAHDQgYLRFFAYMSFFSTSMLGLV---TSSNLIQIYIFWE 144
Cdd:MTH00110 45 PNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMASQHHLSKEP-LTRKKLYITMLILLQLFLImtfTATELIMFYILFE 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 145 LVGMCSYLLIGFWFTRPPAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRdLFEIFNNLIYNNEVNSpfvILCAAL 224
Cdd:MTH00110 124 ATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFL-LLQLWAQPLPNSWSNN---LLWLAC 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 225 LFAGAVaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPL------FIVIPYIMnlISLIGI 291
Cdd:MTH00110 200 MMAFMV-KMPLYGLHLWLPKAhVEAPI-------AGSMVLAAILLklggygMMRITIIlnplteFMAYPFLM--LSLWGM 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270272223 292 ItvlLGATLALAQKDIKRVLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSvihsmetivGYSPD 368
Cdd:MTH00110 270 I---MTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATALMIAHGLTSSMLFCLANS---------NYERI 337
|
330 340 350
....*....|....*....|....*....|....
gi 270272223 369 KSQNMVLMGGLTKHVPITKTSFLLGTLSLCGIPP 402
Cdd:MTH00110 338 HSRTMILARGLQTLLPLMATWWLLASLTNLALPP 371
|
|
| |
