|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-250 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 548.10 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 1 MASLRKTHPLLKIANDALVDLPAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00131 1 MASLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 81 NLHANGASFFFICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160
Cdd:MTH00131 81 NLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 161 VQWIWGGFSVDNATLTRFFAFHFLLPFIVAAATLLHLLFLHETGSNNPLGLNSDADKIPFHPYFTYKDILGFAILIICLT 240
Cdd:MTH00131 161 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALT 240
|
250
....*....|
gi 259155572 241 ALALFSPNLL 250
Cdd:MTH00131 241 SLALFSPNLL 250
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
9-206 |
6.00e-97 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 281.95 E-value: 6.00e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 9 PLLKIANDALVDLPAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIRNLHANGAS 88
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 89 FFFICLYLHIGRGLYYGSY--LYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWG 166
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 259155572 167 GFSVDNATLTRFFAFHFLLPFIVAAATLLHLLFLHETGSN 206
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
22-249 |
7.05e-93 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 278.60 E-value: 7.05e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 22 PAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYLHIGRG 101
Cdd:COG1290 31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 102 LYYGSylYKE----TWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTR 177
Cdd:COG1290 111 FFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNR 188
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 259155572 178 FFAFH-FLLPFIVAAATLLHLLFLHETGSNNPLG----LNSDADKIPFHPYFTYKDILGFAILIICLTALALFSPNL 249
Cdd:COG1290 189 FFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPIN 265
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
18-204 |
8.38e-89 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 260.78 E-value: 8.38e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 18 LVDLPAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYLH 97
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 98 IGRGLYYG--SYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATL 175
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 259155572 176 TRFFAFHFLLPFIVAAATLLHLLFLHETG 204
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-250 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 548.10 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 1 MASLRKTHPLLKIANDALVDLPAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00131 1 MASLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 81 NLHANGASFFFICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160
Cdd:MTH00131 81 NLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 161 VQWIWGGFSVDNATLTRFFAFHFLLPFIVAAATLLHLLFLHETGSNNPLGLNSDADKIPFHPYFTYKDILGFAILIICLT 240
Cdd:MTH00131 161 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALT 240
|
250
....*....|
gi 259155572 241 ALALFSPNLL 250
Cdd:MTH00131 241 SLALFSPNLL 250
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
4-250 |
8.96e-180 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 498.66 E-value: 8.96e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 4 LRKTHPLLKIANDALVDLPAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIRNLH 83
Cdd:MTH00119 5 LRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 84 ANGASFFFICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
Cdd:MTH00119 85 ANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 164 IWGGFSVDNATLTRFFAFHFLLPFIVAAATLLHLLFLHETGSNNPLGLNSDADKIPFHPYFTYKDILGFAILIICLTALA 243
Cdd:MTH00119 165 IWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLA 244
|
....*..
gi 259155572 244 LFSPNLL 250
Cdd:MTH00119 245 LFSPNLL 251
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-250 |
4.70e-175 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 486.45 E-value: 4.70e-175
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 1 MASLRKTHPLLKIANDALVDLPAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00100 1 MTNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 81 NLHANGASFFFICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160
Cdd:MTH00100 81 YLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 161 VQWIWGGFSVDNATLTRFFAFHFLLPFIVAAATLLHLLFLHETGSNNPLGLNSDADKIPFHPYFTYKDILGFAILIICLT 240
Cdd:MTH00100 161 VEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLM 240
|
250
....*....|
gi 259155572 241 ALALFSPNLL 250
Cdd:MTH00100 241 LLVLFSPDLL 250
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-250 |
1.76e-174 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 484.95 E-value: 1.76e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 1 MASLRKTHPLLKIANDALVDLPAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00074 2 AHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 81 NLHANGASFFFICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160
Cdd:MTH00074 82 NIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 161 VQWIWGGFSVDNATLTRFFAFHFLLPFIVAAATLLHLLFLHETGSNNPLGLNSDADKIPFHPYFTYKDILGFAILIICLT 240
Cdd:MTH00074 162 VQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALA 241
|
250
....*....|
gi 259155572 241 ALALFSPNLL 250
Cdd:MTH00074 242 LLSLFSPNLL 251
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
4-250 |
2.26e-170 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 474.02 E-value: 2.26e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 4 LRKTHPLLKIANDALVDLPAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIRNLH 83
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 84 ANGASFFFICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 164 IWGGFSVDNATLTRFFAFHFLLPFIVAAATLLHLLFLHETGSNNPLGLNSDADKIPFHPYFTYKDILGFAILIICLTALA 243
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
....*..
gi 259155572 244 LFSPNLL 250
Cdd:MTH00191 241 LFSPNLL 247
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
11-250 |
6.27e-169 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 470.03 E-value: 6.27e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 11 LKIANDALVDLPAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIRNLHANGASFF 90
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 91 FICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSV 170
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 171 DNATLTRFFAFHFLLPFIVAAATLLHLLFLHETGSNNPLGLNSDADKIPFHPYFTYKDILGFAILIICLTALALFSPNLL 250
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-250 |
1.73e-162 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 454.75 E-value: 1.73e-162
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 1 MASLRKTHPLLKIANDALVDLPAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00145 2 LSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 81 NLHANGASFFFICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160
Cdd:MTH00145 82 SLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKML 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 161 VQWIWGGFSVDNATLTRFFAFHFLLPFIVAAATLLHLLFLHETGSNNPLGLNSDADKIPFHPYFTYKDILGFAILIICLT 240
Cdd:MTH00145 162 VEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLV 241
|
250
....*....|
gi 259155572 241 ALALFSPNLL 250
Cdd:MTH00145 242 FLVLFFPNLL 251
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
4-250 |
3.52e-158 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 443.76 E-value: 3.52e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 4 LRKTHPLLKIANDALVDLPAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIRNLH 83
Cdd:MTH00034 4 LRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 84 ANGASFFFICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
Cdd:MTH00034 84 ANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 164 IWGGFSVDNATLTRFFAFHFLLPFIVAAATLLHLLFLHETGSNNPLGLNSDADKIPFHPYFTYKDILGFAILIICLTALA 243
Cdd:MTH00034 164 IWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLA 243
|
....*..
gi 259155572 244 LFSPNLL 250
Cdd:MTH00034 244 LLFPTAL 250
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-250 |
4.25e-152 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 428.33 E-value: 4.25e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 1 MASLRKTHPLLKIANDALVDLPAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00016 2 FSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 81 NLHANGASFFFICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160
Cdd:MTH00016 82 NLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKML 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 161 VQWIWGGFSVDNATLTRFFAFHFLLPFIVAAATLLHLLFLHETGSNNPLGLNSDADKIPFHPYFTYKDILGFAILIICLT 240
Cdd:MTH00016 162 VQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLL 241
|
250
....*....|
gi 259155572 241 ALALFSPNLL 250
Cdd:MTH00016 242 SVVLLWPNIL 251
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
4-250 |
7.84e-133 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 379.65 E-value: 7.84e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 4 LRKTHPLLKIANDALVDLPAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIRNLH 83
Cdd:MTH00224 5 FRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 84 ANGASFFFICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
Cdd:MTH00224 85 ANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 164 IWGGFSVDNATLTRFFAFHFLLPFIVAAATLLHLLFLHETGSNNPLGLNSDADKIPFHPYFTYKDILGFAILIICLTALA 243
Cdd:MTH00224 165 IWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMV 244
|
....*..
gi 259155572 244 LFSPNLL 250
Cdd:MTH00224 245 LFEPNLF 251
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
4-250 |
2.10e-127 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 365.95 E-value: 2.10e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 4 LRKTHPLLKIANDALVDLPAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIRNLH 83
Cdd:MTH00022 3 LRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLH 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 84 ANGASFFFICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
Cdd:MTH00022 83 ANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQW 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 164 IWGGFSVDNATLTRFFAFHFLLPFIVAAATLLHLLFLHETGSNNPLGLNSDADKIPFHPYFTYKDILGFAILIICLTALA 243
Cdd:MTH00022 163 VWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIV 242
|
....*..
gi 259155572 244 LFSPNLL 250
Cdd:MTH00022 243 YFAPNLL 249
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
3-250 |
1.81e-120 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 348.23 E-value: 1.81e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 3 SLRKTHPLLKIANDALVDLPAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIRNL 82
Cdd:MTH00053 4 TIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 83 HANGASFFFICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQ 162
Cdd:MTH00053 84 HANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVR 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 163 WIWGGFSVDNATLTRFFAFHFLLPFIVAAATLLHLLFLHETGSNNPLGLNSDADKIPFHPYFTYKDILGFAILIICLTAL 242
Cdd:MTH00053 164 WVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSII 243
|
....*...
gi 259155572 243 ALFSPNLL 250
Cdd:MTH00053 244 VFLFPYSL 251
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
4-244 |
6.15e-99 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 293.77 E-value: 6.15e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 4 LRKTHpLLKIANDaLVDLPAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIRNLH 83
Cdd:MTH00033 3 LRKTG-LLEPVND-IIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 84 ANGASFFFICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
Cdd:MTH00033 81 ANGASLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 164 IWGGFSVDNATLTRFFAFHFLLPFIVAAATLLHLLFLHETGSNNPLGLNSDADKIPFHPYFTYKDILGFAILIICLTALA 243
Cdd:MTH00033 161 IWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIG 240
|
.
gi 259155572 244 L 244
Cdd:MTH00033 241 I 241
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
9-206 |
6.00e-97 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 281.95 E-value: 6.00e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 9 PLLKIANDALVDLPAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIRNLHANGAS 88
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 89 FFFICLYLHIGRGLYYGSY--LYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWG 166
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 259155572 167 GFSVDNATLTRFFAFHFLLPFIVAAATLLHLLFLHETGSN 206
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
22-249 |
7.05e-93 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 278.60 E-value: 7.05e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 22 PAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYLHIGRG 101
Cdd:COG1290 31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 102 LYYGSylYKE----TWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTR 177
Cdd:COG1290 111 FFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNR 188
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 259155572 178 FFAFH-FLLPFIVAAATLLHLLFLHETGSNNPLG----LNSDADKIPFHPYFTYKDILGFAILIICLTALALFSPNL 249
Cdd:COG1290 189 FFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPIN 265
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
18-204 |
8.38e-89 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 260.78 E-value: 8.38e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 18 LVDLPAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYLH 97
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 98 IGRGLYYG--SYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATL 175
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 259155572 176 TRFFAFHFLLPFIVAAATLLHLLFLHETG 204
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
15-250 |
3.47e-88 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 265.26 E-value: 3.47e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 15 NDALVDLPAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIRNLHANGASFFFICL 94
Cdd:MTH00086 4 NSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 95 YLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNAT 174
Cdd:MTH00086 84 YLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSAT 163
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 259155572 175 LTRFFAFHFLLPFIVAAATLLHLLFLHETGSNNPLGLNSDADKIPFHPYFTYKDILGFaILIICLTALALFSPNLL 250
Cdd:MTH00086 164 LKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNI-IFWLVFIIFSLFYPFNL 238
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
18-250 |
3.87e-64 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 203.68 E-value: 3.87e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 18 LVDLPAPSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYLH 97
Cdd:MTH00046 9 LIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIH 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 98 IGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTR 177
Cdd:MTH00046 89 MGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVR 168
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 259155572 178 FFAFHFLLPFIVAAATLLHLLFLHETGSNNPLGL-NSDADKIPFHPYFTYKDILGFAILIICLTALALFSPNLL 250
Cdd:MTH00046 169 VFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLV 242
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
88-250 |
1.67e-51 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 165.11 E-value: 1.67e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 88 SFFFICLYLHIGRGLYYGSYLYKE--TWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIW 165
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 166 GGFSVDNATLTRFFAFHF-LLPFIVAAATLLHLLFLHETGSNNPLGLNSDADKIPFHPYFTYKDILGFAILIICLTALAL 244
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*.
gi 259155572 245 FSPNLL 250
Cdd:pfam13631 161 INPIWL 166
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
33-209 |
1.38e-40 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 139.08 E-value: 1.38e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 33 FGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYLHIGRGLYYGSYLYKE- 111
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 112 -TWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFAFH-FLLPFIV 189
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170 180
....*....|....*....|
gi 259155572 190 AAATLLHLLFLHETGSNNPL 209
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
24-209 |
2.11e-35 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 125.60 E-value: 2.11e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 24 PSNISAWWNFGSLLALCLGAQIVTGLFLAMHYTSDISMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYLHIGRGLY 103
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259155572 104 YGSYLYKE--TWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFAF 181
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*....
gi 259155572 182 H-FLLPFIVAAATLLHLLFLHETGSNNPL 209
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
207-250 |
2.38e-07 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 48.80 E-value: 2.38e-07
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 259155572 207 NPLGLNSDADKIPFHPYFTYKDILGFAILIICLTALALFSPNLL 250
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLL 44
|
|
| |
