|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-665 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1364.19 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 1 MLIGAGLILFPTATKSFRRMWAFQSVLLLSIVMVFSIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSIL 80
Cdd:CHL00025 20 MLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLIL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 81 ITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAF 160
Cdd:CHL00025 100 ITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAF 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 161 VTNRVGDFGLLLGILGFYWVTGSFEFRDLFEIFNNLIYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTP 240
Cdd:CHL00025 180 VTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTP 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 241 ISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY 320
Cdd:CHL00025 260 ISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSY 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 321 RSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSPAKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDE 400
Cdd:CHL00025 340 RAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDE 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 401 ILNDSRLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNVHFQNYGGKQKTPFYSISLWGKNG---VKKNSCLLPMNNN 477
Cdd:CHL00025 420 ILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWGKEEskkINKLLLLLTMNNN 499
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 478 ESTYFFSKTKYPIDKNGRKMTRPFMTiaHFEHKAGYSYPYESDNTMLFPLFVLGLFTLFVGSIGIPFNQEGVNLDILSKW 557
Cdd:CHL00025 500 ERVSFFSKKTYKIDGNVRNMIRSFIT--IFGNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKW 577
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 558 LAPSINLLHQKANNSMDWNEFLKDAVLSVSIAYLGIFIASFLYKPIYSSLKNFELINSFVKKGPKRILWDKIINGIYDWS 637
Cdd:CHL00025 578 LTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINSFVKGGPKRIFLDKIINVIYNWS 657
|
650 660
....*....|....*....|....*...
gi 193075821 638 YNRAYIDAFYTRFLVGGIRGLAEFTHFF 665
Cdd:CHL00025 658 YNRGYIDAFYTISFIKGIRGLAELTHFF 685
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-659 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 678.67 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 1 MLIGAGLILFPTATKSFRRMWAFQSVLLLSIVMVFSIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSIL 80
Cdd:PRK07376 20 VLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGDFHLPMGYVIDPLGAVMLVL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 81 ITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAF 160
Cdd:PRK07376 100 VTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAF 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 161 VTNRVGDFGLLLGILGFYWVTGSFEFRDLFEIFNNLIYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTP 240
Cdd:PRK07376 180 VVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDAMEGPTP 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 241 ISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY 320
Cdd:PRK07376 260 ISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAY 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 321 RSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSPAKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDE 400
Cdd:PRK07376 340 SAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDE 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 401 ILNDSRLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGhlnvhfqnyggkqktpfysiSLWGKNGVKKNSCLLPMNNNEST 480
Cdd:PRK07376 420 ILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEG--------------------EFRGNDKELQKELLAAADAPGHH 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 481 YFFSKtkypidkngrkmtrpfmtiAHFEHKAGYSYPYESDNTMLFPLFVLGLFTLFVGSIGIPFNqegvnlDILSKWLAP 560
Cdd:PRK07376 480 EGHHE-------------------EHGEHHHHSGSPHESPWTMTLPLVVLAVPSVLIGLLGTPWN------NRFEAFLHA 534
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 561 SINLLHQKANnsMDWNEFLKDAVLSVSIAYLGIFIASFLYkpiyssLKNFELINSFVKKGPKrilwdkiingIYDWSYNR 640
Cdd:PRK07376 535 PGEALEAAAH--FEWGEFLILAGASVGIALIGITLASLMY------LLKKIDPAAIAERFPP----------LYQFSLNK 596
|
650
....*....|....*....
gi 193075821 641 AYIDAFYTRFLVGGIRGLA 659
Cdd:PRK07376 597 WYLDDIYEKLFVKGSRRLA 615
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
2-661 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 545.52 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 2 LIGAGLILFptatksFRRMW-----AFQSVLLLSIVMVFSIYLSIQQINSS--SFYQYVWSWIINNDFSLDFGYLIDPLT 74
Cdd:PRK06590 13 LIGALILGL------FGRRIgekwaHLVGTGLVGLSALLSLVVFFDFLLGGgrAFSQTLWTWISVGDFDVDFGLRVDGLS 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 75 SIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAAN 154
Cdd:PRK06590 87 ATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGA 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 155 ACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRdlfEIFNNLIYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDA 234
Cdd:PRK06590 167 AAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYD---EVFAAAPQFFGLGWSALTLICLLLFIGAMGKSAQFPLHTWLPDA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 235 MEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLA 314
Cdd:PRK06590 244 MEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLA 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 315 LGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEtivgyspaKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLAC 394
Cdd:PRK06590 324 LGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH--------HEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAG 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 395 FWSKDEILNDSRLYSPIFA-IIAWATAGLTAFYMFRIYLLTFEGhlnvhfqnyggkqktpfysislwgkngvkknscllp 473
Cdd:PRK06590 396 FFSKDEILEAAFANGHINLfVAGLVGAFLTAFYSFRLIFLVFHG------------------------------------ 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 474 mnnnestyffsktkypidkngrkmtrpfmtiahfEHKAGYSYPYESDNTMLFPLFVLGLFTLFVGSIGIPFnqegvnldi 553
Cdd:PRK06590 440 ----------------------------------KEKEKIHHPHESPAVMTLPLIVLAVLSVFAGALIVPP--------- 476
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 554 LSKWLAPSINLLHQKANNSmdwnEFLKDAVLSVSIAYLGIFIASFLYkpiyssLKNFELINSFVKKGPkrilwdkiinGI 633
Cdd:PRK06590 477 FLGVLPLTTELAHGEAEHH----LPVWVALLPLVVALAGIALAWLLY------LKKPTLPTSIAAPGR----------FL 536
|
650 660
....*....|....*....|....*...
gi 193075821 634 YDWSYNRAYIDAFYTRFLVGGIRGLAEF 661
Cdd:PRK06590 537 YTLLRNKYYFDELYEKVFVKPGLALARL 564
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
2-664 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 544.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 2 LIGAGLILFptATKSFRRMWAFQ-SVLLLSIVMVFSIYLsIQQINSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSIL 80
Cdd:COG1009 12 LLGALLAGL--LGRRLGRRAAGWlAALAPLAAFVLSLLL-FPAVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 81 ITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAF 160
Cdd:COG1009 89 VTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAF 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 161 VTNRVGDFGLLLGILGFYWVTGSFEFRDLFEIFNNLIynnevNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTP 240
Cdd:COG1009 169 LVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIL-----SSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTP 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 241 ISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY 320
Cdd:COG1009 244 VSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAY 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 321 RSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDE 400
Cdd:COG1009 324 VAALFHLLTHAFFKALLFLGAGSVIHATGT---------RDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEA 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 401 ILN---DSRLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGhlnvhfqnyggkqktpfysislwgkngvkknscllpmnnn 477
Cdd:COG1009 395 ILEaalEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFG---------------------------------------- 434
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 478 estyffsktkypidkngrkmTRPFMTIAHfehkagysyPYESDNTMLFPLFVLGLFTLFVGSIGIPFnqegvnldiLSKW 557
Cdd:COG1009 435 --------------------KPRPKTPKH---------PHESPWLMTLPLVVLAVLSLVLGLLLPGL---------LEGL 476
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 558 LAP-SINLLHQKANNSMDWNeflkdaVLSVSIAYLGIFIASFLYkpiysslknfelinsfvKKGPKRILWDKiINGIYDW 636
Cdd:COG1009 477 LAPaAVLGGELHLAHGLLLN------ALPLLLSLLGIALGYLLY-----------------LKRPLPALAER-LKPLYRL 532
|
650 660
....*....|....*....|....*...
gi 193075821 637 SYNRAYIDAFYTRFLVGGIRGLAEFTHF 664
Cdd:COG1009 533 LANKWYFDELYDALFVKPVRALARFLWF 560
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
2-665 |
1.55e-162 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 480.24 E-value: 1.55e-162
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 2 LIGAgLILFPTATKSFRRMWAFQSVLLLSIVMVFSIYLSIQQINSSS---FYQYVWSWIINNDFSLDFGYLIDPLTSIMS 78
Cdd:TIGR01974 11 LIGF-LIAGLFGRRIGERVSGIIGIGSVGLSAALSAFVFVDFFLNGEgeaFTQSLFPWISVGGFQVDFGLRLDGLSLTML 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 79 ILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQK 158
Cdd:TIGR01974 90 VVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIK 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 159 AFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFEIFNNLIYNnevnflFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGP 238
Cdd:TIGR01974 170 AFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPGAFFS------ALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGP 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 239 TPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG 318
Cdd:TIGR01974 244 TPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVG 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 319 SYRSALFHLITHAYSKALLFLGSGSIIHSMEtivgyspaKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSK 398
Cdd:TIGR01974 324 AYAAAIFHLMTHAFFKALLFLGAGSVIHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSK 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 399 DEILnDSRLYSP---IFAIIAWATAGLTAFYMFRIYLLTfeghlnvhfqnyggkqktpfysislwgkngvkknscllpmn 475
Cdd:TIGR01974 396 DLIL-EAAFASGthsFLFVAGLIGAFLTAFYSFRLIFMV----------------------------------------- 433
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 476 nnestyFFSKTKYPIDKNgrkmtrpfmtiahfehkagysyPYESDNTMLFPLFVLGLFTLFVGSIGIPFNQegvnldils 555
Cdd:TIGR01974 434 ------FHGKERHEADAH----------------------PHESPLVMLLPLIVLAVGSVFAGFFIVPLFE--------- 476
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 556 kWLAPSinLLHQKANNSMDWNEFLKDAVLSVSIAYLGIFIASFLYkpiyssLKNFELINSFVKKGpkrilwdkiiNGIYD 635
Cdd:TIGR01974 477 -FLKGV--LPTSAEPALEHHHVPALEIWSPTAVAILGILLAYLLY------LGNPTLPAKIAQRH----------SGLYR 537
|
650 660 670
....*....|....*....|....*....|
gi 193075821 636 WSYNRAYIDAFYTRFLVGGIRGLAEFTHFF 665
Cdd:TIGR01974 538 LLLNKWYFDELYDKVFVKPYLFLGKLLWKD 567
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
429-665 |
5.97e-150 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 433.96 E-value: 5.97e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 429 RIYLLTFEGHLNVHFQNYGGKQKTPFYSISLWGKNG---VKKNSC---LLPMNNNESTYFFSKTKYPIDKNGRKMTRPFM 502
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGsklINKNFRtllLLTMNNNEKVSFFSKKTYRIDGNVRNMTRPFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 503 TIAHFEHKAGYSYPYESDNTMLFPLFVLGLFTLFVGSIGIPFNQEGVNLDILSKWLAPSINLLHQKANNSMDWNEFLKDA 582
Cdd:pfam01010 81 TITHFDNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNSNNSVDWYEFVTNA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 583 VLSVSIAYLGIFIASFLYKPIYSSLKNFELINSFVKKGPKRILWDKIINGIYDWSYNRAYIDAFYTRFLVGGIRGLAEFT 662
Cdd:pfam01010 161 IFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLAELT 240
|
...
gi 193075821 663 HFF 665
Cdd:pfam01010 241 HFF 243
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
44-440 |
3.43e-112 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 350.46 E-value: 3.43e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 44 INSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSS 123
Cdd:MTH00210 52 LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 124 NLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFEIFNNLIYNNEVn 203
Cdd:MTH00210 132 NYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESL- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 204 flfvTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITV 283
Cdd:MTH00210 211 ----TIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 284 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMetivgyspAKSQNMG 363
Cdd:MTH00210 287 FFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV--------SDEQDMR 358
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 193075821 364 LMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEILNDS-RLYSPIFAI-IAWATAGLTAFYMFRIYLLTFEGHLN 440
Cdd:MTH00210 359 KMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTyDKYYIAFAYwLGSFSALLTAFYSIRLIYLTFITNTN 437
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
25-435 |
5.77e-112 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 349.76 E-value: 5.77e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 25 SVLLLSIVMVFSIYLSIQqINSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLR 104
Cdd:MTH00020 34 SCLIISLSWSFLIFYEIL-FNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPR 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 105 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSF 184
Cdd:MTH00020 113 FMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSL 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 185 EFRDLFEIFNNLIYNNevnflfVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 264
Cdd:MTH00020 193 DFSSVFNMVVSAPSSD------ITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPL 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 265 FRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSI 344
Cdd:MTH00020 267 FEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSV 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 345 IHSMetivgyspAKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEILNDS-RLYSPIFAI-IAWATAGL 422
Cdd:MTH00020 347 IHAL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAfGQYYLIFAYwLGCFSALL 418
|
410
....*....|...
gi 193075821 423 TAFYMFRIYLLTF 435
Cdd:MTH00020 419 TAFYSIRLIYLTF 431
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-441 |
4.95e-91 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 294.55 E-value: 4.95e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 1 MLIGAGLILFPTATKSFRRMWAFQSVLLLSIVMVFsIYLSiQQINSSSFYqyvWSWIINNDFSLDFGYLIDPLTSIMSIL 80
Cdd:MTH00211 13 LILLLLPLLLPLNNSKLHIKKAVKLSFFISLIPLL-IFLD-QGLETILTN---WSWINLGLFSLNLSFKFDFYSIFFTSV 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 81 ITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAF 160
Cdd:MTH00211 88 ALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 161 VTNRVGDFGLLLGILGFYWVTGSFEFrdlfeifnNLIYNNEVNFLFVTLCAVLlfaGAVAKSAQFPLHVWLPDAMEGPTP 240
Cdd:MTH00211 168 IYNRIGDIGLLLSMVWLLLNLNSWEI--------SQLFILNLDLTLFLLGLLL---AAMGKSAQFGFHPWLPSAMEGPTP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 241 ISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY 320
Cdd:MTH00211 237 VSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQP 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 321 RSALFHLITHAYSKALLFLGSGSIIHSMETIvgyspaksQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDE 400
Cdd:MTH00211 317 QLAFLHICTHAFFKAMLFMCSGSIIHGLNNE--------QDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDL 388
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 193075821 401 IL---NDSRLYSPIFAIIAWATaGLTAFYMFRIYLLTFEGHLNV 441
Cdd:MTH00211 389 ILesmNGSYLNAWALLLTLLAT-SLTAAYSFRLIFLSLGGYPRF 431
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
44-402 |
5.69e-86 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 283.39 E-value: 5.69e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 44 INSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSS 123
Cdd:MTH00032 52 INDAVVHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 124 NLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDL------FEIFNNLI 197
Cdd:MTH00032 132 NYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgSGIMDRGY 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 198 YNNEVNFL----FVTLcAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMY 273
Cdd:MTH00032 212 YGGGAYESplapFAII-GILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLL 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 274 LISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM-GSYRSALFHLITHAYSKALLFLGSGSIIHSMETiv 352
Cdd:MTH00032 291 IITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV-- 368
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 193075821 353 gyspaKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEIL 402
Cdd:MTH00032 369 -----DEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
122-421 |
1.95e-83 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 264.56 E-value: 1.95e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 122 SSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFEIFNNLIYNNE 201
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 202 VNFLFvtlcaVLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF-RVIPYIMYLISVIG 279
Cdd:pfam00361 81 LLLLF-----LLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 280 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSIIHSMEtivgysp 356
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV------- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 193075821 357 aKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEILNDSRLYSPIFAIIAWATAG 421
Cdd:pfam00361 228 -HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
25-435 |
1.13e-82 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 273.39 E-value: 1.13e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 25 SVLLLSIVMVFSIYLSIQQINSSSFYqyvwsWIINNDFSLDFGYLIDpltsIMSILITTVGIMV----LIYSDNYMAHDQ 100
Cdd:MTH00208 65 LAFLSLINLLIWILLGCPNINISLSN-----WLSNTLFNFSLSFIFD----FYFILFFSVALFVtwsiIEFSHYYMSNDP 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 101 GYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWV 180
Cdd:MTH00208 136 NKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLIN 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 181 TGSFefrDLFEIFnnliYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR 260
Cdd:MTH00208 216 FNSW---NLNEIL----SLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIR 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 261 LLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLG 340
Cdd:MTH00208 289 TSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLC 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 341 SGSIIHSMEtivgyspaKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEIL-----NDSRLYSPIFAII 415
Cdd:MTH00208 369 SGSIIHSLN--------NEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILeaglaSISNLLSIILALI 440
|
410 420
....*....|....*....|
gi 193075821 416 AwatAGLTAFYMFRIYLLTF 435
Cdd:MTH00208 441 A---TLLTAVYSFRIIFFCF 457
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
31-438 |
2.96e-80 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 266.26 E-value: 2.96e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 31 IVMVFSIYLSIQQINSSsfyqyvWSWIINNDFSLDFGYLIDPLtSIMSI---LITTVGIMVliYSDNYMAHDQGYLRFFA 107
Cdd:MTH00004 49 IPLTLFLNSGTESITTN------WPWIFTTTFNIPISFKLDQY-SLMFLpiaLFVTWSILE--FSTWYMASDPHITKFFK 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 108 YMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFR 187
Cdd:MTH00004 120 YLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQ 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 188 DLFeifnnliYNNEVNflfvTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRV 267
Cdd:MTH00004 200 QLF-------SPTQTP----TLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQN 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 268 IPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHS 347
Cdd:MTH00004 269 NQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHN 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 348 MetivgyspAKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKD---EILNDSRLYSPIFAIIAWATAgLTA 424
Cdd:MTH00004 349 L--------NNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDtiiETLNTSYLNAWALLLTLLATS-FTA 419
|
410
....*....|....
gi 193075821 425 FYMFRIYLLTFEGH 438
Cdd:MTH00004 420 AYSLRMILLVQTGF 433
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
54-430 |
1.15e-79 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 264.46 E-value: 1.15e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 54 WSWIINNDFSLDFGYLIDpltsIMSILITTVGIMV----LIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIY 129
Cdd:MTH00066 64 FHWMNIFNFNINSSFKFD----QYSIIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLF 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 130 IFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFeifnnLIYNNEVNFLFVTL 209
Cdd:MTH00066 140 IGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIF-----LLNDNSTLPLLGLI 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 210 CAvllfagAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATL 289
Cdd:MTH00066 215 LA------AAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAAC 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 290 ALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMetivgyspAKSQNMGLMGGLR 369
Cdd:MTH00066 289 ALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQ 360
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 193075821 370 KHVPITQITFLLGTLSLCGIPPLACFWSKDEI---LNDSRLYSPIFAIIAWATAgLTAFYMFRI 430
Cdd:MTH00066 361 KALPITTSCLTIGSLALTGTPFLAGFFSKDAIieaMNTSNLNSWALILTLIATS-FTAVYSFRI 423
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-433 |
6.47e-79 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 266.40 E-value: 6.47e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 54 WSWIinNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWE 133
Cdd:PRK12647 48 YAWV--PSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWE 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 134 LVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFEiFNNLIYNNEvnflFVTLCAVL 213
Cdd:PRK12647 126 LTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREHP----LYLAILLL 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 214 LFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQ 293
Cdd:PRK12647 201 VLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQ 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 294 KDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRK 370
Cdd:PRK12647 281 TDLKLILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE---------TGTRDITKLGGLRR 351
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 193075821 371 HVPITQITFLLGTLSLCGIPPLACFWSKDEILnDSRLYSPIFAIIAWATAGLTAFYMFRIYLL 433
Cdd:PRK12647 352 AMPITAAAALLAALSMAGLPPLFGFLAKELIY-EALLEAPLWSLILTVAAVLGNALMVAVAFL 413
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
2-431 |
3.56e-78 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 255.46 E-value: 3.56e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 2 LIGAGLILFPTATKSFRRMWAFQSVLLLsivMVFSIYLSIQQINSSSFYQYVWSWIinndFSLDFGYLIDPLTSIMSILI 81
Cdd:COG0651 13 LLAAALLLLLGRRRRLQRALSLLASLAL---LALALALLLQVLAGGPLVYALGGWP----APFGIVLVADRLSALFLLLT 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 82 TTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPvAANACQKAFV 161
Cdd:COG0651 86 ALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE-ALRAGLKYLI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 162 TNRVGDFGLLLGILGFYWVTGSFEFRDLFEIFnnliynNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAM-EGPTP 240
Cdd:COG0651 165 LNLVGSALFLLGVGLLYGATGTLNMADLAARL------AELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYpAAPSP 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 241 ISALIHAAtMVAAGIFLVARLLPLF---RVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM 317
Cdd:COG0651 239 VSALLSGL-LTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 318 GSYRS---ALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLAC 394
Cdd:COG0651 318 GTPLGlagALFHLLNHALAKALLFLAAGAIERA---------TGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
410 420 430
....*....|....*....|....*....|....*...
gi 193075821 395 FWSKDEILNDS-RLYSPIFAIIAWATAGLTAFYMFRIY 431
Cdd:COG0651 389 FVSKWLLLQAAlEAGAWLLAAVLLLSSLLTLAYFVRIF 426
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
27-437 |
4.23e-78 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 260.61 E-value: 4.23e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 27 LLLSIVMVFSIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFF 106
Cdd:PRK07390 44 LLMTLLAFVHSLLALRAIWNQPPQQLSFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 107 AYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEF 186
Cdd:PRK07390 124 ALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNF 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 187 RDLFEIFNnliyNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFR 266
Cdd:PRK07390 204 SDLAAWAA----TANLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLA 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 267 VIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIh 346
Cdd:PRK07390 279 LSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSII- 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 347 sMETIvgyspakSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEILNDSRLYSPIFAIIAWATAGLTAFY 426
Cdd:PRK07390 358 -LTTI-------TQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFN 429
|
410
....*....|.
gi 193075821 427 MFRIYLLTFEG 437
Cdd:PRK07390 430 LTRVFRLVFLG 440
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
54-430 |
2.95e-72 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 245.13 E-value: 2.95e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 54 WSWI------INNDFSLDFgYlidpltsimSILITTVGIMV----LIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSS 123
Cdd:MTH00137 70 WNWMntltfdINISFKFDH-Y---------SIIFTPIALYVtwsiLEFASWYMHADPNMNRFFKYLLIFLIAMIILVTAN 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 124 NLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFEIFNNLIynnevn 203
Cdd:MTH00137 140 NMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMAWMATNLNSWEIQQIFALSKDFD------ 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 204 flfVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITV 283
Cdd:MTH00137 214 ---LTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTT 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 284 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEtivgyspaKSQNMG 363
Cdd:MTH00137 291 LFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLN--------DEQDIR 362
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 193075821 364 LMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEI---LNDSRLYspifaiiAWATA------GLTAFYMFRI 430
Cdd:MTH00137 363 KMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLN-------AWALTltliatSFTAVYSLRV 431
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
8-438 |
3.26e-72 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 249.07 E-value: 3.26e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 8 ILFPTATKSFRRMWAFQSVLLLSIVMvFSIYLS-IQQINSSSFYQYVWSWIINndFSLDFGYLIDPLTSIMSILITTVGI 86
Cdd:PRK12645 16 LLIPFLYKYFKRIHTGWFVLPVPVVL-FIYFLSlIPTTMSGNTVMKTLPWIPS--LGINFTLYVDGLSLLFALLITGIGS 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 87 MVLIYSDNYMAHDQGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRV 165
Cdd:PRK12645 93 LVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVF 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 166 GDFGLLLGILGFYWVTGSFEFRDLFEIFNNLiynneVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALI 245
Cdd:PRK12645 173 GGLSMLGGFILLYIMTGSFSIREMIANADEI-----QNSPLFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 246 HAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS------ 319
Cdd:PRK12645 248 HSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAaslhyq 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 320 ----------YRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRKHVPITQITFLLGTLSLCGI 389
Cdd:PRK12645 328 gddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHETGT---------RDIRKLGGLMTIMPITFTIALIGALSMAGL 398
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 390 PPLACFWSKDEILN------DSRLYSP-----IFAIIAWATAGLTAFYMFRIYLLTFEGH 438
Cdd:PRK12645 399 PPFNGFLSKEMFFEsmlnatEANLFSLdtwgvLFPVIAWVASVFTFVYSIIFIFKTFFGK 458
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
52-429 |
8.01e-72 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 250.61 E-value: 8.01e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 52 YVWSWIinNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYI 130
Cdd:PRK12644 56 EVVPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 131 FWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFeifnnliyNNEVNFLFVTLC 210
Cdd:PRK12644 134 FWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELL--------ADPPTGPAVSVA 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 211 AVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLA 290
Cdd:PRK12644 206 VVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRA 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 291 LAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHL---ITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGG 367
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHSTGT---------RDIRKLSG 356
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 193075821 368 LRKHVPITQITFLLGTLSLCGIPPLACFWSK----DEILNDSRLYSPIFAIIAWATAG--LTAFYMFR 429
Cdd:PRK12644 357 LGRRQPVLAVVAALAAASMAGLPPLLGFVAKeaalEAVLHDGALGPAGPVVLAGIVLGsiLTVAYSLR 424
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
8-437 |
2.15e-71 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 246.68 E-value: 2.15e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 8 ILFPTATKSFRRMWAFQSVLLLSIVmVFSIYLSIQQINSS-SFYQYVWSWIinNDFSLDFGYLIDPLTSIMSILITTVGI 86
Cdd:TIGR00940 13 SLIPILYPSDQRIHIGWFVLAIPLV-CFLYTLGLYPYTASgGVLHYTIDWV--PELGLNFTLYMDGLALLFSLLITGIGV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 87 MVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVG 166
Cdd:TIGR00940 90 LVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 167 DFGLLLGILGFYWVTGSFEFRDLFEIFNNLIynNEVNFLFVTlcaVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIH 246
Cdd:TIGR00940 170 GLAMLGGLILLGKITGSFSIDAVIASADAIR--NSPLFGTAM---VLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLH 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 247 AATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS------- 319
Cdd:TIGR00940 245 SATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSpsyhyqg 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 320 ---------YRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRKHVPITQITFLLGTLSLCGIP 390
Cdd:TIGR00940 325 ddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHETGT---------RDIRKLGGLFHIMPITFTLAMIASAAMAGVP 395
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 193075821 391 PLACFWSKDEILN-----------DSRLYSPIFAIIAWATAGLTAFYMFRIYLLTFEG 437
Cdd:TIGR00940 396 PFNGFLSKEMFFAeaitahlvnpfDTVTLGYLFPYVATVASVFTFVYSLRFIHGVFFG 453
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
2-415 |
4.06e-71 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 238.34 E-value: 4.06e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 2 LIGAGLILF-PTATKSFRRMWAFQSVLLLSIVMVFSIYLSiqqiNSSSFYQYVWSWiinNDFSLdFGYLIDPLTSIMSIL 80
Cdd:PRK06525 12 FIGALVVFFlPGRRAAELGVLFAALTTLCMLSLAYAFYQA----GKVAVTLTLVNL---GDVAL-FGLVIDPVSVLIGFV 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 81 ITTVGIMVLIYSDNYMA-------HDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTrPVAA 153
Cdd:PRK06525 84 VVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQS-PKAL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 154 NACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFEIFNNLIYnneVNFLFVtlcavlLFAgAVAKSAQFPLHVWLPD 233
Cdd:PRK06525 163 RSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKY---LVFLGI------LFA-AWGKSAQLPFYSWLPD 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 234 AMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPY-IMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMM 312
Cdd:PRK06525 233 AMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHvIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMF 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 313 LALGMGSYRS------ALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRKHVPITQITFLLGTLSL 386
Cdd:PRK06525 313 FGLSLAILGSrlalegSIAYIFNHAFAKSLFFLVAGALSYSCGT---------RLLPRLRGVLKKLPLVGVGFCVAALAI 383
|
410 420
....*....|....*....|....*....
gi 193075821 387 CGIPPLACFWSKDEILNDSRLYSPIFAII 415
Cdd:PRK06525 384 TGVPPFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
54-438 |
4.74e-70 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 238.98 E-value: 4.74e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 54 WSWIINNDFSLDFGYLIDpLTSIMSI---LITTVGIMVliYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYI 130
Cdd:MTH00108 66 WHWMTIQTLKLSLSFKLD-YFSMIFIpvaLFVTWSIME--FSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFI 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 131 FWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFeifnnLIYNNEVNFlfvTLC 210
Cdd:MTH00108 143 GWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIF-----MLNPNNSNL---PLM 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 211 AVLLfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLA 290
Cdd:MTH00108 215 GLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICA 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 291 LAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEtivgyspaKSQNMGLMGGLRK 370
Cdd:MTH00108 293 LTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLN--------DEQDIRKMGGLFK 364
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 193075821 371 HVPITQITFLLGTLSLCGIPPLACFWSKD---EILNDSRLYSPIFAIIAWATAgLTAFYMFRIYLLTFEGH 438
Cdd:MTH00108 365 TLPFTSTALIIGSLALTGMPFLTGFYSKDliiEAANTSYTNAWALLITLIATS-LTAAYSTRIIFFALLGQ 434
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
2-429 |
7.71e-68 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 239.32 E-value: 7.71e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 2 LIGAgliLFPTATKSFRRM---WAFQSVLLLSIVMVFSIYlsiQQINSSSFYQYVWSWIinNDFSLDFGYLIDPLTSIMS 78
Cdd:PRK12648 11 FLGA---LLAALLPRNARNaeaWLAGLVALAALVLLALLY---PAVAAGEVIRAEIEWL--PALGLNLSLRLDGLAWLFA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 79 ILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQK 158
Cdd:PRK12648 83 LLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARM 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 159 AFVTNRVGDFGLLLGILGFYWVTGSFefrDLFEIFNN--LIYNNEvnfLFV-TLCAVLLfaGAVAKSAQFPLHVWLPDAM 235
Cdd:PRK12648 163 ALTVTGAGGLALLAGVLLLGHIVGSY---DLDVVLAAgdLIRAHP---LYPpALVLILL--GAFTKSAQFPFHFWLPHAM 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 236 EGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL 315
Cdd:PRK12648 235 AAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLL 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 316 GMGSYRS---ALFHLITHAYSKALLFLGSGSIIHsmETivgyspaKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPL 392
Cdd:PRK12648 315 GLGSPLAavaAIFHIINHATFKASLFMAAGIIDH--ET-------GTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLL 385
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 193075821 393 ACFWSK----DEILNDSRLYSPIFAIIAWATAG--LTAFYMFR 429
Cdd:PRK12648 386 NGFLSKemffAETLDTHLLGSLDWLLPVAATLAgaFSVAYSLR 428
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
64-433 |
3.79e-67 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 235.11 E-value: 3.79e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 64 LDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLI 143
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 144 GFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFEifNNLIYNNEVNFLFVTLCAVLLFAGAVAKSA 223
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQ--DSELIENIKGHPLFLITLILIFIGAAAKSA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 224 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYS 303
Cdd:PRK12649 230 QGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 304 TMSQLGYMMLALGMGSYR-------SALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRKHVPITQ 376
Cdd:PRK12649 310 TISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHE---------AATRDIRKLGGLRKEMPITF 380
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 193075821 377 ITFLLGTLSLCGIPPLACFWSKDEILNDS----RLYSPIFAII--AWATAGLTAFYMFRIYLL 433
Cdd:PRK12649 381 IVASIAALAMAGIPPLNGFLSKEMFYETSvemgALIGGPFTIIipAVAVLGGVFTFAYSIKLI 443
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
7-440 |
3.89e-66 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 232.34 E-value: 3.89e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 7 LILFPTATKSFRRmWAFQSVLLLSIVMVFSIYLSIQQINSSSFYQYVWSWIINNDFSLDFgyLIDPLTSIMSILITTVGI 86
Cdd:PRK12646 16 MILLTSKRRALAK-YAGYIALVAPIISSIYFLIQIPSVAKLQYLSTSIPWMKTLDINLDL--RLDGLSLMFSLIISLIGI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 87 MVLIYSDNYMAHDQGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRV 165
Cdd:PRK12646 93 AVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVF 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 166 GDFGLLLGILGFYWVTGSFEFRDLFEIFNNLiyNNEVNFLFVTLCAVLlfaGAVAKSAQFPLHVWLPDAMEGPTPISALI 245
Cdd:PRK12646 173 GGLALLVGFIMLYIMTGTNNITEILGQADHI--KNHGLFIPMIFMFLL---GAFTKSAQFPFHIWLPRAMAAPTPVSAYL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 246 HAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG------- 318
Cdd:PRK12646 248 HSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaqhq 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 319 ----------SYRSALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRKHVPITQITFLLGTLSLCG 388
Cdd:PRK12646 328 qdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHE---------AGTRDIRILSGMRQLFPKMNLVMTIAALSMAG 398
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 193075821 389 IPPLACFWSKD----------EILNDSRLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLN 440
Cdd:PRK12646 399 VPFLNGFLSKEmfldaltqtgQLSQFSLISMIIIVFIGVIASIFTFTYALYMVKEVFWGKYD 460
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
26-440 |
5.59e-60 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 210.66 E-value: 5.59e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 26 VLLLSIVMVFSIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRF 105
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 106 FAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPvAANACQKAFVTNRVGDFGLLLGILGFYwvtgsfe 185
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSK-SLSAGMLTALTNRVGDALLILSIAWML------- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 186 frdLFEIFNNLIYNNEVNFLFVTLCAVLLfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLF 265
Cdd:MTH00209 158 ---MHGNWNIFYLNFNSNLGSVISVLIVL--AAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 266 RVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSII 345
Cdd:MTH00209 233 FSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNII 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 346 HSMetivgyspAKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEILnDSRLYSP---IFAIIAWATAGL 422
Cdd:MTH00209 313 HSH--------GHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL-ESMLESNmpiMTLILMFLSTSL 383
|
410
....*....|....*...
gi 193075821 423 TAFYMFRIYLLTFEGHLN 440
Cdd:MTH00209 384 TAAYSMRLSYFSLWGPNS 401
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
23-440 |
5.76e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 208.07 E-value: 5.76e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 23 FQSVLLLSIVMVFSIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGY 102
Cdd:MTH00165 5 LISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 103 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIgFWFTRPVAANACQKAFVTNRVGDFGLLLGIlGFYWVTG 182
Cdd:MTH00165 85 NRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSI-AWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 183 SFEFRDLFEIFNNLIYNNEVNFLFVTlcavllfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 262
Cdd:MTH00165 163 SWNFIFYLDFMKNSFEMLLIGLLIML--------AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 263 PLFrVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSG 342
Cdd:MTH00165 235 NLL-FSSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 343 SIIHSMETivgyspakSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEIL-----NDSRLYSPIFAIIAw 417
Cdd:MTH00165 314 SIIHNMSN--------SQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILemvsmSNLNFFIFFLFFFS- 384
|
410 420
....*....|....*....|...
gi 193075821 418 atAGLTAFYMFRIYLLTFEGHLN 440
Cdd:MTH00165 385 --TGLTVSYSFRLIYYSMSGDFN 405
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
2-440 |
1.47e-56 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 199.54 E-value: 1.47e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 2 LIGAGLILF-PTATKSFRRMWAFqsvLLLSIVMVFSIYLSIQQINSSSFYQYV--WSWIinNDFSLDFGYLIDPLTSIMS 78
Cdd:COG1008 14 LLGALLLLLlPRRNARLARWVAL---AVSLLTLLLSLYLLAGFDPGTGGFQFVesYPWI--PSLGISYHLGVDGISLPLV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 79 ILITTVGIMVLIYSDNYMAHDQGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFW--FTRPVAANac 156
Cdd:COG1008 89 LLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIYAAI-- 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 157 qKAFVTNRVGDFGLLLGILGFYWVTGSFEFrDLFEIFNNLIYNNEVNFLFVtlcavLLFAGAVAKSAQFPLHVWLPDA-M 235
Cdd:COG1008 165 -KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAQLLLFL-----AFFIAFAVKVPMFPFHTWLPDAhV 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 236 EGPTPISAlIHAATMVAAGIFLVARL-LPLFrviP----YIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGY 310
Cdd:COG1008 238 EAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF---PeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGF 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 311 MMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSMetivgyspaKSQNMGLMGGLRKHVPITQITFLLGTLSLC 387
Cdd:COG1008 314 VLLGIFALNPLGlqgAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVLAALFLLAALASL 384
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 193075821 388 GIPPLACFWSKDEILNDSRLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLN 440
Cdd:COG1008 385 GLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLK 437
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
7-432 |
2.48e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 198.07 E-value: 2.48e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 7 LILFPTATKSFRRMWAFqsvlllsIVMVFSIYLSIQQINSSSFYQyvWSWIINNDFSLDFGYLIDPLTSIMSILITTVGI 86
Cdd:MTH00207 1 LRMFKPSSIASYLLWFM-------SILMFPLSLYLMMCNKTILIE--WEIFTISSSPINFTIILDPTGTLFSSTVLFISA 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 87 MVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIgFWFTRPVAANACQKAFVTNRVG 166
Cdd:MTH00207 72 NVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 167 DFGLLLGIlgfYWvTGSFEFRDLFEIFNNLIYNnevnflFVTLCAVLlfaGAVAKSAQFPLHVWLPDAMEGPTPISALIH 246
Cdd:MTH00207 151 DVMLLLSI---GW-TLNQGHWSITNMWQTDMNN------YIALSIMI---AAMTKSAQMPFSSWLPAAMAAPTPVSALVH 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 247 AATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFH 326
Cdd:MTH00207 218 SSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFH 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 327 LITHAYSKALLFLGSGSIIHSMEtivgyspaKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEILnDSR 406
Cdd:MTH00207 298 LITHALFKALLFVCAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLIL-ESS 368
|
410 420 430
....*....|....*....|....*....|
gi 193075821 407 LYSP----IFAIIAWATaGLTAFYMFRIYL 432
Cdd:MTH00207 369 LFYPhnslMILMIFLAT-ALTAAYSTRFTL 397
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
25-441 |
4.08e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 197.37 E-value: 4.08e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 25 SVLLLSIVMVFSIYLSIQQINSSSfyqYVWSWIINNDFSLDFGY--LIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGY 102
Cdd:MTH00151 8 SFLLFSYSVFLFPLLGYFGLNGIS---LIFEWELLSVSSCSFSFelVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 103 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFvTNRVGDFGLLLGILGFYwVTG 182
Cdd:MTH00151 85 KRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDVLILLSIALLV-LLG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 183 SFefrdlfeifnNLIYNNEVNFLFvtLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 262
Cdd:MTH00151 163 HW----------SILSMWDFKLSG--WLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFF 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 263 PLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSG 342
Cdd:MTH00151 231 PFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAG 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 343 SIIHSMetivgyspAKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEILnDSRLYSPI----FAIIAWA 418
Cdd:MTH00151 311 SIIHSS--------SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLIL-ESSLMSPTsllmVLLMFVG 381
|
410 420
....*....|....*....|...
gi 193075821 419 TaGLTAFYMFRIYLLTFEGHLNV 441
Cdd:MTH00151 382 V-GLTALYSARLSFCLVWGSMKS 403
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
56-428 |
2.71e-54 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 200.65 E-value: 2.71e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 56 WI---INNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFW 132
Cdd:PRK12650 60 WIpdlLGNGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAW 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 133 ELVGLCSYLLIGFwfTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSfefRDLFEIFNNLIYNNEVNFLFVTlcAV 212
Cdd:PRK12650 140 ELVSLASFFLIAR--SGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGT---TSLSGILHSDVWAEKPGLTTVV--AV 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 213 LLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALA 292
Cdd:PRK12650 213 LIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQ 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 293 QKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLR 369
Cdd:PRK12650 293 KTDLKKLTAYSTVSQLGWIVATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDHQ---------AGTRDIRRLGSLW 363
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 193075821 370 KHVPITQITFLLGTLSLCGIPPLACFWSKDEILnDSRLYSPIFAIIAW---ATAGLTAFYMF 428
Cdd:PRK12650 364 RRMPFTFVSVTIAALSMAAVPPLFGFVSKEGML-TAFLEAPGGNAGVVlllVGAALGAVFTF 424
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
68-437 |
1.61e-51 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 186.33 E-value: 1.61e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 68 YLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWF 147
Cdd:PRK12667 78 YEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 148 TRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFEIFNNLIYNNEVNfLFVTLCAVLLFAGAVA------K 221
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGG-LAGNPPLALGVALALAlwaftiK 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 222 SAQFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL--------PLFRVIPYIMYLISVIGIITVLLGATLALA 292
Cdd:PRK12667 237 AAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 293 QKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLR 369
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHA---------AGTRDIDELAGLG 386
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 193075821 370 KHVPITQITFLLGTLSLCGIPPLACFWSKDEILNDSRLYSP-IFAIIAWATAGLTAFYMFRIYLLTFEG 437
Cdd:PRK12667 387 RKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFyLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-430 |
2.31e-51 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 185.08 E-value: 2.31e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 2 LIGAGLILFPTATKSFRRMWAF-QSVLLLSIVMVFSIYLSIQQINSSSFYQYVWSWIInndfsldfGYLIDPLTSIMSIL 80
Cdd:PRK08375 14 LLAAALIVLLPKRRRLRWALALlVAALTFALAISLLPQVLDGGVIAYVVGGWPPGIGI--------ELRADSLSALFLLV 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 81 ITTVGIMVLIYSDNYMAHDQGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRpVAANACQKAF 160
Cdd:PRK08375 86 TSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR-RALAAARKYL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 161 VTNRVGDFGLLLGILGFYWVTGSFEFRDLFEIFNnliynnEVNFLFVTLcAVLLFAGAVaKSAQFPLHVWLPDAMEGPTP 240
Cdd:PRK08375 163 IVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAF-GFVLLALAL-KAAVFPLHTWLPRAYPAAPP 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 241 ISALIHAATMVAAGIFLVARLL-----PLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL 315
Cdd:PRK08375 235 VVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGL 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 316 GMGSYRS---ALFHLITHAYSKALLFLGSGSIihsmetivgYSPAKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPL 392
Cdd:PRK08375 315 ALLTPLAlaaGLLHLLHHALMKGALFLAAGAI---------EVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPT 385
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 193075821 393 ACFWSKDEIL---NDSRLYSPIFAIIawATAGLTAFYMFRI 430
Cdd:PRK08375 386 SGFVSKWYLVvgaVEAGQWLVLAVLL--ASSLLALLYFLRI 424
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
70-437 |
1.15e-50 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 184.14 E-value: 1.15e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 70 IDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTR 149
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 150 PVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEfrdlfeiFNNLIYNNEVNFLFVTLCAVLLFAGAVA-KSAQFPLH 228
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLN-------MAYLAVKMSENPTVVAKIALALFIAGLAmKSGAVPVH 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 229 VWLPDAM-EGPTPISALIHAATmvAAGIFLVAR-LLPLFRV---IPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYS 303
Cdd:PRK08376 241 MWLPDAYpAAPSSISAMLLVIK--QAGLYALARvLFSIYGPainLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYH 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 304 TMSQLGYMMLALGMG--SYRS-------------ALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGL 368
Cdd:PRK08376 319 SVSQIGYMLLGLGVGlaALGDpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETGT---------RNLNELGGL 389
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 193075821 369 RKHVPITQITFLLGTLSLCGIPPLACFWSKDEILNDSRLYSPIFAIIAWATAGLTAFYMFRIYLLTFEG 437
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
68-430 |
1.82e-44 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 165.67 E-value: 1.82e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 68 YLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTS-MLGLVTSSNLIQIYIFWELVGLCSYLLIGFW 146
Cdd:COG1007 66 FVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 147 FTRPVAANACQKAFVTnrvGDFG---LLLGILGFYWVTGSFefrDLFEIFNNLIYNNEVNFLFVtLCAVLLFAGAVAKSA 223
Cdd:COG1007 146 RDDRRSSEAALKYFLL---GALSsgfLLYGISLLYGATGSL---NLAGIAAALAAGGANSPLLL-LGLVLVLAGLAFKLS 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 224 QFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGL 300
Cdd:COG1007 219 AVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRML 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 301 AYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLgsgsIIhsmeTIVGYSPAKSQNMGLMGGLRKHVPITQI 377
Cdd:COG1007 298 AYSSIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VI----LLLSRKGGEAEEIEDLAGLARRSPLLAL 369
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 193075821 378 TFLLGTLSLCGIPPLACFWSKDEILN---DSRLYspIFAIIAWATAGLTAFYMFRI 430
Cdd:COG1007 370 AMTIFLLSLAGIPPTAGFFGKFYVFSaavEAGLY--WLAVIAVLNSVISAYYYLRV 423
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-430 |
7.02e-41 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 155.75 E-value: 7.02e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 1 MLIGAGLILFPTATKSFRRMWAFQSVLLLSIVMVFSIYLSIQQINSSSFYQyvwswiinndfsldfGYLIDPLTSIMSIL 80
Cdd:PRK05777 17 LLGAAVVLLLIDAFVRRHSRRATLAVLALLLALVALLFVLGAAGGGTAFGG---------------MLVVDGFALFLKGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 81 ITTVGIMVLIYSDNYMAhDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAF 160
Cdd:PRK05777 82 ILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 161 VtnrVGDFG---LLLGILGFYWVTGSFEFRDLFEIFNNLIYNNevnfLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEG 237
Cdd:PRK05777 161 V---LGALAsgfLLYGMSLLYGATGSLSFAGIAKALADGSGNS----LLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 238 -PTPISALIHAATMVAAgIFLVARLL--PLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLA 314
Cdd:PRK05777 234 aPTPVTAFLATAPKIAA-FAVLLRLLvvAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 315 LGMGS---YRSALFHLITHAYSKallfLGSGSIIHSMETIVGYspakSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPP 391
Cdd:PRK05777 313 LAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGE----AESISDFAGLSKRSPLLAAVMTIFMLSLAGIPP 384
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 193075821 392 LACFWSKDEILN---DSRLYspIFAIIAWATAGLTAFYMFRI 430
Cdd:PRK05777 385 TAGFWGKFYVFEaavEAGLW--WLAVIGVLNSAIGAFYYLRV 424
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
5-345 |
1.02e-40 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 156.01 E-value: 1.02e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 5 AGLILFPTATKSFRRMWAFQSVLLLSIVMVFSIYLSIQQINSSSfyqyvwSWIINndfsldfgyliDPLTSIMSILITTV 84
Cdd:PRK08168 19 GGLLLSRWLTRALWRIAQAASLAGLFLALLGLVLFATGAAWPAA------AWLEV-----------SGLGLVMAALVQLL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 85 GIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNR 164
Cdd:PRK08168 82 GWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADR 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 165 VGDFGLLLGILGFYWVTGSFEFRDLFEIfnnliYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISAL 244
Cdd:PRK08168 162 LAELLLLAAAALAYLEVGSLSLSALWAH-----LAAQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSAL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 245 IHAAtMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSAL 324
Cdd:PRK08168 237 LHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELAL 315
|
330 340
....*....|....*....|.
gi 193075821 325 FHLITHAYSKALLFLGSGSII 345
Cdd:PRK08168 316 LHLVAHSLYKAHAFLSASEAV 336
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
2-446 |
1.80e-40 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 154.71 E-value: 1.80e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 2 LIGAGLILFPTATKSFRRMWAFQSVLLLsiVMVFSIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSILI 81
Cdd:TIGR01972 9 LIGALLILLLPSNKDGKARWIALVVALA--TLLLSLLLLFQFDPTGSGFQFTEDIPWIPALGISYHLGVDGISLLLVLLT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 82 TTVGIMVLIYSDNYMAHDQGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWfTRPVAANACQKAFV 161
Cdd:TIGR01972 87 ALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYAAMKFFL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 162 TNRVGDFGLLLGILGFYWVTG-SFefrDLFEIFNNLIYNNEVNFLFVtlcaVLLFAGAVaKSAQFPLHVWLPDAM-EGPT 239
Cdd:TIGR01972 164 YTLAGSLLMLLAILGLYFLGGgTF---DLLELLNLPLPFGVQTWLFL----AFFIAFAV-KVPLFPLHTWLPDAHvEAPT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 240 PISALIHAATMVAAGIFLVARLLPLF-RVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG 318
Cdd:TIGR01972 236 AGSVILAGVLLKMGTYGFLRFNLPLFpDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSF 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 319 SYRS---ALFHLITHAYSKALLFLGSGSIihsmetivgYSPAKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACF 395
Cdd:TIGR01972 316 NELGisgAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGF 386
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 193075821 396 WSKDEILNDSRLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNVHFQNY 446
Cdd:TIGR01972 387 VGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAE 437
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
55-398 |
2.71e-40 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 156.31 E-value: 2.71e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 55 SWIINNDFSLDFGYLIdpLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFfsTSMLGLVTSSNLIQIYIFWEL 134
Cdd:PRK08668 54 LTLFFGGFKLTFTLTH--LSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVLGVFLANDLLTLYIFWEI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 135 VGLCSYLLIGFWFTRpvAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFrdlFEIFNNLIYNNEVNF-LFVTLcavL 213
Cdd:PRK08668 130 MTFSSFMMVPMGKKE--SRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDF---ADISQGLINDTSTGFaLIVFL---F 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 214 LFAGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLLP---------LFRVIPYIMYLISVIGII 281
Cdd:PRK08668 202 LLAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtklfsefgTYRGVPLFNYILAWLGNI 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 282 TVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspak 358
Cdd:PRK08668 282 SIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGT-------- 353
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 193075821 359 sQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSK 398
Cdd:PRK08668 354 -TKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
70-437 |
8.47e-40 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 155.43 E-value: 8.47e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 70 IDPLTSIMSILITTVGIMVLIYSDNYM--AHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWF 147
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFreYEGKGPGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANH 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 148 TRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDlfeifnnlIYNNEVNFLFVTLCAVLLFAGAVAKSAQFPL 227
Cdd:PRK06521 158 REAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAA--------MRAAHLSPFWASLVFLLALFGFGAKAGLVPL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 228 HVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFRVIP--YIMYLISVIGIITVLLGATLALAQKDIKRGLAYST 304
Cdd:PRK06521 230 HVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPgwWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYST 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 305 MSQLGYMMLALGMG--------------SYRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRK 370
Cdd:PRK06521 309 IENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATGT---------RDMEKLGGLIR 379
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 193075821 371 HVPITQITFLLGTLSLCGIPPLACFWSK----DEILNDS-------RLYSPIFAIIAWATAGLTAFYMFRIYLLTFEG 437
Cdd:PRK06521 380 RMPWTAWAFLIGCLAISALPPLNGFVSEwlllQSLLSSPglpqwglKLAVPIAAAMLALTAALAAMCFVKFYGITFLG 457
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
2-440 |
2.17e-39 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 151.89 E-value: 2.17e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 2 LIGAGLILFptATKSFRRMWAFQSVLLLSIVMVFSIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSILI 81
Cdd:PRK05846 14 LIGGLLVLL--TERFGARLARWIALIGTLLTLLLSLVLWIGFDSSNAGFQFVEKHPWIPRFGISYHLGVDGISLLLVVLT 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 82 TTVGIMVLIYSDNYMAHDQGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFW--FTRPVAANacqKA 159
Cdd:PRK05846 92 ALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWggKNRIYAAT---KF 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 160 FVTNRVGDFGLLLGILGFYWV----TGSFEFRDLFeifNNLIYNNEVNFLFVTLcavlLFAGAVaKSAQFPLHVWLPDAM 235
Cdd:PRK05846 167 FLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLL---NLPLPPGVQYWLFLAF----FIAFAV-KMPMFPLHTWLPDAH 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 236 EGPTPISALIHAATMVAAGIF-LVARLLPLFRVIP-YIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMML 313
Cdd:PRK05846 239 VQAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDAShEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTL 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 314 ALGMGSYRS---ALFHLITHAYSKALLFLGSGSIihsmetivgYSPAKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIP 390
Cdd:PRK05846 319 GIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVL---------YDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLP 389
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 193075821 391 PLACFWSKDEILNDSRLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLN 440
Cdd:PRK05846 390 GTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVK 439
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-430 |
5.75e-36 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 141.88 E-value: 5.75e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 56 WIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHD--QGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWE 133
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 134 LVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEF--RDLFEIFNNLIynnevnflfvtlcA 211
Cdd:PRK06589 147 LLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFvsGGLFSKNQSII-------------L 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 212 VLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLIS------VIGIITVLL 285
Cdd:PRK06589 214 LLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAefnwliFIPIVSIFY 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 286 GATLALAQKDIKRGLAYSTMSQLGYMMLALGM---GSYRSALFHLITHAYSKALLFLGSGSIihsmetivgYSPAKSQNM 362
Cdd:PRK06589 294 SSLKALKTDNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQV 364
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 193075821 363 GLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEIL-----NDSRLYSPIFAIIAWATAGLTAFYMFRI 430
Cdd:PRK06589 365 DKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKI 437
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
1-398 |
6.18e-36 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 143.72 E-value: 6.18e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 1 MLIGAGLILFPTATK---SFRRMWAFQSVL-LLSIVMVFSIYLSIQQINSSSFYQYVWSWIInndfSLDFGYLIDPLTSI 76
Cdd:PRK08667 6 FLGAILLLLAAAVIPlvfRHKRKRVWQSVLwLVIAIALLLFAGSLQLFTGNPLDIPLWGIAP----GLDITFHIDRLAAF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 77 MSILITTVGIMVLIYSDNYMAHDQGYLR---FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAA 153
Cdd:PRK08667 82 FIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 154 NACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLfeifnnliynnEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPD 233
Cdd:PRK08667 162 RAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPL-----------GASAGILSLVFLLLFLGFGIKAGIIPFHKWLPY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 234 AMEG-PTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMM 312
Cdd:PRK08667 231 AHPAsPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIIL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 313 LALG--------------MGSYRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRKHVPITQIT 378
Cdd:PRK08667 311 MGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHATGT---------RNIEKMGGLVKLMPYTSAL 381
|
410 420
....*....|....*....|
gi 193075821 379 FLLGTLSLCGIPPLACFWSK 398
Cdd:PRK08667 382 FLVGAVSIAALPPFNGFASE 401
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
23-435 |
2.92e-34 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 137.36 E-value: 2.92e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 23 FQSVLLLSIVMVFSIYLSIQQINSSSFYQYVWSWIINNDFsldfgylidpLTSIMSILITTVGIMVLIYSDNYMAHDQGY 102
Cdd:MTH00095 6 FLILFFFFFLLLFILFLPFMKLNLFFLEWDFLSLKFNFYF----------NSLLFSLILLLVTLSVLVFSSYYMNGELNF 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 103 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTrpvaANACQKA---FVTNRVGDFGLLLGILGFyw 179
Cdd:MTH00095 76 NYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNN----WDSNSGAmntALTNRIGDFFIFLFFSGF-- 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 180 vtgsfefrdlfeIFNNLIYNNEvnFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVA 259
Cdd:MTH00095 150 ------------IFSSYYFFSF--SFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLM 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 260 RLLPLFRVIPYIMyLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFL 339
Cdd:MTH00095 216 NFSYLILNMNVMK-IMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFM 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 340 GSGSIIHSMetivgYSPAKSQNMGLMGGLRKHVpitQITFLLGTLSLCGIPPLACFWSKDEILND--SRLYSPIFAIIAW 417
Cdd:MTH00095 295 QVGYLIHSN-----FGQQDGRNYSNNGNLPMFI---QLQLLVTLFCLCGLMFTSGMVSKELILELffFNNYMIFFSLMFF 366
|
410
....*....|....*...
gi 193075821 418 ATAGLTAFYMFRIYLLTF 435
Cdd:MTH00095 367 FSVFLTFGYSYRLWKSFF 384
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
69-397 |
5.99e-33 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 132.75 E-value: 5.99e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 69 LIDPLTSIMSILITTVGIMVLIYSDNYMAHDQ-------GYLRFFAYM-SFFSTSMLGLVTSSNLIQIYIFWELVGLCSY 140
Cdd:PRK06458 66 FIDDLNVFFLALIGVVGFLTSLYSIGYMRHEVehgelspVTLRLYYGMyQLFLFTMLLALTSNNLGLMWVAIEATTLSSA 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 141 LLIGFWFTRpVAANACQKAFVTNRVG-DFGLLLGILGFYWVTGSFEFRDLFEIFNNLI-YNNEVNFLFVTLCAVLLFAGA 218
Cdd:PRK06458 146 LLVGIYRTR-ASLEAAWKYIIICSVGvAFALFGTILVYANAATVMGDGEMAILWTELLkHASLLDPTLMKLAFVFLLIGF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 219 VAKSAQFPLHVWLPDA-MEGPTPISALIhaatmvaAGIFLVARLLPLFRVipYIM-----------YLISVIGIITVLLG 286
Cdd:PRK06458 225 GTKVGLFPMHAWLPDAhSEAPSPVSALL-------SGVLLNVALYAVLRY--YILidaaigsdfpgRLLLIFGLLSVLVA 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 287 ATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMG 363
Cdd:PRK06458 296 AFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKYGT---------RDIN 366
|
330 340 350
....*....|....*....|....*....|....
gi 193075821 364 LMGGLRKHVPITQITFLLGTLSLCGIPPLACFWS 397
Cdd:PRK06458 367 VIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFIS 400
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
118-437 |
1.92e-31 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 128.35 E-value: 1.92e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 118 GLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPvAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFEIFNNli 197
Cdd:PRK08377 123 GMIATGDIFNLFVFMEITAITAYALTAYNKTGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGT-- 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 198 ynneVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLPLFRVIP---YIMY 273
Cdd:PRK08377 200 ----IDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANgwsSVLK 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 274 LISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmet 350
Cdd:PRK08377 275 LVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGIT--- 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 351 ivgyspAKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEIL--NDSRLYSPIFAIIAWATAGLTAFYMF 428
Cdd:PRK08377 352 ------LGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIIlaGLSAGYTWPVALVLGASVVEAVYYFR 425
|
....*....
gi 193075821 429 RIYLLTFEG 437
Cdd:PRK08377 426 LIHTMWFKG 434
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-402 |
2.78e-31 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 127.76 E-value: 2.78e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 2 LIGAGLILFPTATKSFRRMWAfqsvlLLSIVMVFSIYLSiqqinsssfyQYVWSWIINNDFSLDFgyLIDPLTSIMSILI 81
Cdd:PRK07234 14 LLGFAIYLLPKLDRNLALGMA-----IVSAVYALGLVAS----------MVPLELTLLDNFGVTL--RADALSGYFILTN 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 82 TTVGIMVLIYSdnyMAHDQGYLrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFV 161
Cdd:PRK07234 77 ALVTLAVIFYC---WESAKTRF-FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYLFY 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 162 TNRVGDFgLLLGILGFYWVTGSFEFRDLFEIfnnliynnevnflfVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 241
Cdd:PRK07234 153 SNVAMLF-YLIGAVLVYQANGTFAFSGLATA--------------DPEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPP 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 242 SALIHAATMVAAGIFLVARLLPLfrvIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGsyr 321
Cdd:PRK07234 218 VSALLSGVVVKAGVFPLVRCALD---VPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG--- 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 322 sALFHLiTHAYSKALLFLGSGsIIHSmETIVGYspaKSQnmglMGGLRKHVPITqitflLGTLSLCGIPPLACFWSKDEI 401
Cdd:PRK07234 292 -GLYAL-AHGLVKSTLFLCAG-ALPS-RNFTEL---ISQ----MLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLT 355
|
.
gi 193075821 402 L 402
Cdd:PRK07234 356 L 356
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
23-430 |
2.61e-30 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 124.68 E-value: 2.61e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 23 FQSVLLLSIVMVFSIYLSIQQINSSSFYQYVWSWIINNDFSLdfgylidpltSIMSILITTVGIMVLIYSDNYMAHDQGY 102
Cdd:TIGR01770 32 LLLKNLSYIVLLSALVSLFLTLQYAAYLFTGFSFFIVDNFAL----------LIKLILLLSTLLTFFFALSYLSKEKINK 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 103 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTG 182
Cdd:TIGR01770 102 FEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTG 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 183 SFEFRDLFEIFNNlIYNNEVNFLfvtLCAVLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAA-GIFLVAR 260
Cdd:TIGR01770 182 SLNFEDLLLFLSN-GMLNISLLL---LGIVLILVGLLFKLSAVPFHMWVPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLF 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 261 LLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALL 337
Cdd:TIGR01770 258 LYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTlegIKAVLFYIFIYALMSLGA 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 338 FlgsgSIIHSMETivgYSPAKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEI---LNDSRLYSpiFAI 414
Cdd:TIGR01770 338 F----GVLSLLRS---YKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVffaLLKSGLYW--LAV 408
|
410
....*....|....*.
gi 193075821 415 IAWATAGLTAFYMFRI 430
Cdd:TIGR01770 409 IAVLTSVIGAFYYLRV 424
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
70-367 |
1.58e-29 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 122.84 E-value: 1.58e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 70 IDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSF--FSTSMLGLvtSSNLIQIYIFWELVGLCSYLLIGFWF 147
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGATLLGLTLLIGLNK 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 148 TRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRdlfeifNNLIYNNEVNF--LFVTLCAVLLFAGAVAKSAQF 225
Cdd:PRK08601 148 GWKVAREAAKISGMLFLISWLALALAIVWLFIATGEWQLT------SVLSNENLAQLgtWEKTGINLLLILAVMIPAAQW 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 226 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLFR-VIPYIMYLIsvIGIITVLLGATLALAQKDIKRGLAYST 304
Cdd:PRK08601 222 PFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHdDIAQILLLI--FASISVLIGTGISLVQVDYKRQLVGST 298
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 193075821 305 MSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEtIVGYSPAKSQNMGLMGG 367
Cdd:PRK08601 299 MAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN-IVKQANEKKSYLWIVVG 360
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-437 |
9.85e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 117.36 E-value: 9.85e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 1 MLIGAGLILFPTATKSFRrmwaFQSVLLLSIVMVFSIYLSIQQINSSSFYQYVWSWiiNNDFSLDFgyLIDPLTSIMSIL 80
Cdd:PRK07691 14 VITAILLIFLGKRPIIQR----YVALIGSLLTLVAAIILVANVYKHGIQTLELGNW--KAPFGIVF--VADMFAALLVLT 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 81 ITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRpVAANACQKAF 160
Cdd:PRK07691 86 SSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQLRESIKYV 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 161 VTNRVGDFGLLLGILGFYWVTGSFEFRDLFEIFNNLIYNNEVnflFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGP-T 239
Cdd:PRK07691 165 LINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTG---LITVVAILFLFVFATKAGLFPLYFWLPGSYYAPpI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 240 PISALIhAATMVAAGIFLVARLLPLFRV--IPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM 317
Cdd:PRK07691 242 AIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAM 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 318 G---SYRSALFHLITHAYSKALLFLGSGSIIHsmetIVGYSPAKSqnmglMGGLRKHVPITQITFLLGTLSLCGIPPLAC 394
Cdd:PRK07691 321 MtesGMIGAIYYLIHDMIVKAALFLLIGIMIK----ITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSLAGIPPLSG 391
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 193075821 395 FWSKDEILNDSRLY-SPIFAIIAWATAGLTAFYMFRIYLLTFEG 437
Cdd:PRK07691 392 FYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWG 435
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
68-398 |
2.95e-27 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 116.92 E-value: 2.95e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 68 YLIDPLTSIMSILITTVGIMVLIYSdnymAHDQGYLRFFAYMSFFSTSmLGLVTSSNLIQIYIFWELVGLCSYLLIgfWF 147
Cdd:PRK12668 63 GRVDKLSRVFGLIFGIMAFIGVIYA----LHVKDPGQHVAALLYVGSA-LGAVFAGDLLTLFVFWELMAFTSTFLV--WA 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 148 TR-PVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFrDLFEIFNnliynnevnflfvTLCAVLLFAGAVAKSAQFP 226
Cdd:PRK12668 136 RGtKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLG-------------GTAAWLILIGFGVNAAFPP 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 227 LHVWLPDAMEGPTpisalihaatmVAAGIFLVA-----RLLPLFRVIPYIMYLIsVIGIITVLLGATLALAQKDIKRGLA 301
Cdd:PRK12668 202 LHAWLPDAYPEAT-----------VTGSVFLSAfttktAVYALARAFPGTELLI-YIGAAMAVYGVFFALLENDLRRLLS 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 302 YSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSpaksqnmglMGGLRKHVPITQIT 378
Cdd:PRK12668 270 YHIVSQVGYMVAGIGIGTalaINGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTE---------LGGLYRSMPLTALF 340
|
330 340
....*....|....*....|
gi 193075821 379 FLLGTLSLCGIPPLACFWSK 398
Cdd:PRK12668 341 CLVGALSISAFPLFSGFVSK 360
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
25-345 |
2.75e-25 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 110.35 E-value: 2.75e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 25 SVLLLSIVMVFSIYLSIqqiNSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLR 104
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLF---LVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 105 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTrPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSf 184
Cdd:MTH00063 78 LNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSG- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 185 efrdlfeifnnliynnevNFLFVTLCAVLLFAgavaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 264
Cdd:MTH00063 156 ------------------SFLCCLFFFLIVFT----KSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYL 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 265 FRVIPYImYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSI 344
Cdd:MTH00063 214 LGFSWLS-IFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV 292
|
.
gi 193075821 345 I 345
Cdd:MTH00063 293 M 293
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
2-435 |
8.00e-25 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 108.50 E-value: 8.00e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 2 LIGAGLILFptatKSFRRMWAFQSVLLLSIVMVFSIYLSIQQINsssfyqyvwswiiNNDFSLDFG---------YLIDP 72
Cdd:PRK12663 15 LCGLVLVFL----RNRDRLQRYLAIGTLTILTLISLALLIYVQR-------------HGPITLDFGgwlppfgiqFTGDS 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 73 LTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRpVA 152
Cdd:PRK12663 78 LSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQER-EQ 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 153 ANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFEIFNNLIYNNEVnflfVTLCAVLLFAGAVaKSAQFPLHvWLP 232
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATL----TTIALLFLLAFGM-KAALFPFM-WLP 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 233 DAMEGP-TPISALIhAATMVAAGIFLVARLLP-LFRVIPYIMY-LISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLG 309
Cdd:PRK12663 231 AAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHpLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIG 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 310 YMMLALGMGSY---RSALFHLITHAYSKALLFLGSGSIIHsmetIVGYSPAKSqnmglMGGLRKHVPITQITFLLGTLSL 386
Cdd:PRK12663 310 FILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLVR----LTGYRSLQY-----LGGLYRKEPLFGALFLILIFAI 380
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 193075821 387 CGIPPLACFWSKDEILN---DSRLYspIFAIIAWATAGLTAFYMFRIYLLTF 435
Cdd:PRK12663 381 GGLPPFSGFWGKVLLVQgalDNGAY--ILLALMLITSLITMYSLFRIFFLAY 430
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
70-430 |
1.14e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 101.73 E-value: 1.14e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 70 IDPLTSIMSILITTVGIMVLIYS---DNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFW 146
Cdd:PRK12662 74 VDILSATMLVLVNFIAVMSVLYGiypNRKEISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMG 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 147 FTRPvAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFEIFNNLIYNN--EVNFLFVTLcavllfaGAVAKSAQ 224
Cdd:PRK12662 154 RDKK-ALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRaiQIGVLFIMV-------GLFIKAAL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 225 FPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL------PLFRVIPYIMYLISVIGIITVLLGATLALAQKDIK 297
Cdd:PRK12662 226 FPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIK 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 298 RGLAYSTMSQLGYMMLALGMGSYR---SALFHLITHAYSKALLFLGSGSIIHSMETIvgyspaksqNMGLMGGLRKHVPI 374
Cdd:PRK12662 305 RIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFGTT---------KLEDCLNLWKSMPK 375
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 193075821 375 TQITFLLGTLSLCGIPPLACFWSKDEILN---DSRLYSPIFAIIawATAGLTAFYMFRI 430
Cdd:PRK12662 376 ITLAFVLLSLSLIGMPPTSGFVAKWYILDafiKSNAWIGLVVLL--VGSGLSVIYVWKI 432
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
2-446 |
2.62e-22 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 100.94 E-value: 2.62e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 2 LIGAGLI-LFPTATKSFRrmWAFQSVLLLSIVMVFSIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYLIDPLtSIMSIL 80
Cdd:PRK07363 10 ILGAIIIgFFPGNLPSAR--LRQITLVFAVLVLAWSLFLLTQFDLSDPGMQFQEYLPWNEPLGLSYSLGVDGL-SLPLLV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 81 ITTVGIMVLIYSDNYMAHDQGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPvAANACQKAF 160
Cdd:PRK07363 87 LNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-RGYASIKFL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 161 VTNRVGDFGLLLGILGFYWVTGSFEFRDLFEIFNNLIYNNEVNFLfvtlcaVLLFAGAVAKSAQFPLHVWLPDAMEGPTP 240
Cdd:PRK07363 164 IYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILL------TGLLLGFGIKIPLVPLHTWLPDAYTEASP 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 241 ISALIHAATMVAAGIFLVARL-LPLFrviPYIMYLIS----VIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL 315
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLLRFgLQLF---PQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAA 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 316 GMGSYRS---ALFHLITHAYSKALLFLGSGSIihsmETIVGYSPAKSQNmGLMGGLRKhVPITQITFLLGTLSLCGIPPL 392
Cdd:PRK07363 315 AAGTQLSllgAVAQMISHGLILALLFHLVGIV----ERKVGTRDLDVLN-GLMNPIRG-LPLTSALLVLAGMASAGIPGL 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 193075821 393 ACFWSKDEILNDSRLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNVHFQNY 446
Cdd:PRK07363 389 VGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKLAYY 442
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
2-445 |
8.50e-20 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 93.23 E-value: 8.50e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 2 LIGAGLILFPTATKSFRRMWAFqSVLLLSIVMVFSIYLSIQQINSSSFYQYVWS--WIinNDFSLDFGYLIDPLtSIMSI 79
Cdd:PRK06473 10 LLGAILIGFWPSGINGKLARSV-ALVIASVLLLLSLVLAFQFDPGNPNQQFTEFipWI--DSLGLSYHLGVDGL-SLPLL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 80 LITTVGIMVLIYSDNYMAHDQGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWfTRPVAANACQKA 159
Cdd:PRK06473 86 VLNSLLTLIAIYSSDESIQRPRF--YYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKF 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 160 FVTNRVGDFGLLLGILGFYWVTGSFEFRdlfeiFNNLIYNN-EVNFLFVTLCAVLLfaGAVAKSAQFPLHVWLPDA-MEG 237
Cdd:PRK06473 163 LLYTAISGILILVSFLGLVWLSGASSFD-----YEPLRSHTlPLSTQLLLLAPILV--GFGIKIPLVPFHTWLPDAhVEA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 238 PTPISALIhAATMVAAGIFLVARL-LPLF-RVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL 315
Cdd:PRK06473 236 STPVSVLL-AGVLLKLGTYGLLRFgVGLFpEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAA 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 316 GMG---SYRSALFHLITHAYSKALLFLGSGsiihsmetiVGYSPAKSQNMGLMGGL---RKHVPITQITFLLGTLSLCGI 389
Cdd:PRK06473 315 AAAtplSILAAVFQMISHGLISALLFLLVG---------VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGI 385
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 193075821 390 PPLACFWSKDEILNDSRLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNVHFQN 445
Cdd:PRK06473 386 PGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSN 441
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
108-398 |
1.21e-19 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 92.37 E-value: 1.21e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 108 YMSFFSTSMLG---LVTSSNLIQIYIFWELVGLCSYLLIGFwFTRPVAANACQKAFvtnrvgdfgLLLG-----IL--GF 177
Cdd:CHL00049 113 FLLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY-TKKDVRSNEATMKY---------LLMGgasssILvyGF 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 178 YWVTG-SFEFRDLFEIFNNLIYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGI 255
Cdd:CHL00049 183 SWLYGlSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAAS 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 256 FLVARLLPLfrVIPYIM----YLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHA 331
Cdd:CHL00049 262 ALATRIFDI--PFYFSSnewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYM 339
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 193075821 332 YSKALLFLGSGSIIHSMETIVGyspakSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSK 398
Cdd:CHL00049 340 LFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
208-398 |
3.19e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 91.57 E-value: 3.19e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 208 TLCAVLLFAGAVaKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLG 286
Cdd:PRK12665 210 ALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 287 ATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMG 363
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVGLIERQ---------AGSSSLR 358
|
170 180 190
....*....|....*....|....*....|....*
gi 193075821 364 LMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSK 398
Cdd:PRK12665 359 RLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGK 393
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
120-437 |
3.74e-18 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 88.35 E-value: 3.74e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 120 VTSSNLIQIYIFWELVGLCSYLLIGfwftrpvaanaCQKA----FVTNRVGDFGLLLGILGFYWVTGSFEFRDLFEIFNN 195
Cdd:PRK08042 107 VIASNLGMFVVMAEIMALCAVFLTG-----------NSKEgklwFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQ 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 196 LIYNNEVNFLFVTlcAVLLFAGAVaksaqfPLHVWLPDAMEGPTPISALIHAATMVAAGIF------LVARLLPLFRVIp 269
Cdd:PRK08042 176 LPLGSDIWLLGVI--GFGLLAGII------PLHGWVPQAHANASAPAAALFSTVVMKIGLLgiltlsLLGGNAPLWWGV- 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 270 yimyLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG--------------SYRSALFHLITHAYSKA 335
Cdd:PRK08042 247 ----ALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKS 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 336 LLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEI------LNDS---- 405
Cdd:PRK08042 323 VLFLGAGSVWFR---------TGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSgafv 393
|
330 340 350
....*....|....*....|....*....|...
gi 193075821 406 -RLYSPIFAIIAWATAGLTAFYMFRIYLLTFEG 437
Cdd:PRK08042 394 aRLLGPLLAVGLAITGALAVMCMAKVYGVTFLG 426
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
68-435 |
7.30e-18 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 87.12 E-value: 7.30e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 68 YLIDPLtSIMSILITTVG-IMVLIYSDNYMAH-------DQGYLRFFaymsFFSTSMLGLVT-----SSNLIQIYIFWEL 134
Cdd:PRK08676 59 LFIDHL-GIFVVLIASVVfILAALYARGYVDHllsngelDPENLKVF----YLGFNLLLSVItfaffSDNLALFWIFAEL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 135 VGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWV-----TGSFEFRDLfeifnnLIYNNEVNFLFVTL 209
Cdd:PRK08676 134 TTVFSAMLIAILSARENIDAALKYIFIASTAMIFAFIGLIFLFSLTrqalgTGTLNWTEL------AAHASLLSPSVLGA 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 210 CAVLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFR---VIPYIMYLISVIGIITVLL 285
Cdd:PRK08676 208 SFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGLGIFSIAV 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 286 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGsIIHSMetivgyspAKSQNM 362
Cdd:PRK08676 287 AAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ--------YRSDRF 357
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 193075821 363 GLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEILNDSRLYSPIFAIIAWATAGLTAFYMFRIYLLTF 435
Cdd:PRK08676 358 DRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFLLKAF 430
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
24-402 |
1.71e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 85.45 E-value: 1.71e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 24 QSVLLLSIVMVFsIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYLIdpltsIMSILITTVGIMVLIYSDNYMAHDQGYL 103
Cdd:MTH00199 24 LSTLKLSIGVLL-LIGLIVELNSLNLFQSDKVLDGTNGLLLTNSWII-----ISKIIIIIGSISILLMGSGETILSEGGQ 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 104 RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGS 183
Cdd:MTH00199 98 SSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGE 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 184 FEFRDlfeifNNLIYNNEVNFLFVTLCavLLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLVarll 262
Cdd:MTH00199 178 TSIQG-----INSILTGDVGKILITIS--LLFKLSAA-----PFHMWAPDVYEGaPTITTALL--ATVPKIGVFSI---- 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 263 pLFRVIPyIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLIThayskallflgsg 342
Cdd:MTH00199 240 -LVQIGP-VTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIY------------- 304
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 193075821 343 SIIHSMETIVGYSPAKSQNMGL-----MGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEIL 402
Cdd:MTH00199 305 MIIYVIMSICSFSIILSLKLTKgliveVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
115-398 |
2.51e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 84.31 E-value: 2.51e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 115 SMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFEIFN 194
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 195 NLIYNNEVNFLFVTLCAV--LLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLVarllpLFRVIPYI 271
Cdd:MTH00196 85 SGQSFSSVSVPIGYLLIIvaLLFKLSVA-----PFHMWAPDVYEGaPTKTTALL--AIVPKLGIFSI-----LVSIGLNV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 272 MYLIsVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSM 348
Cdd:MTH00196 153 NILL-IGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESiqaSLVYLFIYIIMSICVFSIILALNVYK 231
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 193075821 349 ETIVGYSpaksqnmglmgGLRKHVPITQITFLLGTLSLCGIPPLACFWSK 398
Cdd:MTH00196 232 NLIIEFS-----------GLSRRLPILAITLALTFLSIAGIPPLVGFLGK 270
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
68-398 |
4.19e-17 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 84.70 E-value: 4.19e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 68 YLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLrFFAYMSFFSTSmlGLVTSSNLIQIYIFWELVGLCSyllIGFWF 147
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYV-FLMLMGLASVS--AIVLADDIFNLYVFFEIAAIVQ---VGLVI 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 148 TRPVAaNACQKAFVTNRVGDFG---LLLGILGFYWVTGSFEFRDLfeifNNLIYNNEVNFLFVTLCAVLLFaGAVAKSAQ 224
Cdd:PRK06277 142 ASGTE-EAYKAALKYMILGNVAgsiLLLGIGFLLASTGTLNITDI----HNALLVNPTSPVIYGGLLLLIF-GLLYGSGL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 225 FPLHVWLPDAMEGPTP-ISALIHA---ATMVAAGIFLVaRLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGL 300
Cdd:PRK06277 216 PPFHTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLL 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 301 AYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSIihsmetivgYSPAKSQNMGLMGGLRKHVPITQI 377
Cdd:PRK06277 295 AYHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVAF 365
|
330 340
....*....|....*....|.
gi 193075821 378 TFLLGTLSLCGIPPLACFWSK 398
Cdd:PRK06277 366 MVLCAKLAISGVPPFNGFQSK 386
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
105-434 |
4.95e-17 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 84.31 E-value: 4.95e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 105 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFW--FTRPVAANacqKAFVTNRVGDFGLLLGILGFYWVTG 182
Cdd:PRK12561 89 FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWggQKRLYAAT---KFILYTALASIFILVAGLALALSGD 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 183 SFEFrDLFEIfnnliYNNEVNFLFVTLC-AVLLFAGAVaKSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFLVAR 260
Cdd:PRK12561 166 TFTF-DLAEL-----GAKSYPLALELLLyAGFLIAFGV-KLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLKMG 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 261 LLPLFR----VIP----YIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRS-----ALFHL 327
Cdd:PRK12561 232 GYALIRfnvqMLPdahvYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAMLQM 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 328 ITHAYSKALLFLGSGsiihsmetiVGYSPAKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEI---LND 404
Cdd:PRK12561 310 ISHGLIAAALFFLTG---------VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgITS 380
|
330 340 350
....*....|....*....|....*....|..
gi 193075821 405 SRLYSPIFAIIawaTAGLTA--FYMFRIYLLT 434
Cdd:PRK12561 381 SDVYSSTFRTI---TILLAAvgLILTPIYLLS 409
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
108-398 |
1.71e-16 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 82.79 E-value: 1.71e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 108 YMSFFSTSMLG---LVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSF 184
Cdd:PRK02504 112 FAAILLTATLGgmfLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 185 EfrDLFEIFNNLIYNNEvnfLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLVARLLP 263
Cdd:PRK02504 192 T--QLSAIALALITSPS---LGLALALVFVIAGIAFKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLLV 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 264 LfrVIPYI----MYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHayskal 336
Cdd:PRK02504 266 T--AFPSFdeqwKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAY------ 337
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 337 LFLGSGS----IIHSMET----IVGYSpaksqnmglmgGLRKHVPITQITFLLGTLSLCGIPPLACFWSK 398
Cdd:PRK02504 338 LFMNLGAfacvILFSLRTgtdqISDYA-----------GLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
56-106 |
2.88e-15 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 70.15 E-value: 2.88e-15
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 193075821 56 WIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFF 106
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
75-392 |
5.47e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 65.58 E-value: 5.47e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 75 SIMSILITTVGIMVLIYSDNYmAHDQGYLRffAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWftrpvaAN 154
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY-DHYGKWLS--SLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT------KK 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 155 ACQKAFVTNRVGDFGLLLGILGFYW---VTGSFEFrdlfeifnnliynnevNFLFVTLCAVLLFAGAVAKSAQFPLHV-- 229
Cdd:PRK06459 118 NKRPAFVFMAFGELSTVLILAGFAWafiISGTTNF----------------SYLPSPVPLILASFGFIIKMGMMPFLVse 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 230 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIP--YIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQ 307
Cdd:PRK06459 182 WLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPigYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIEN 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 308 LGYMMLALGM--------GSYR-----SALFHLITHAYSKALLFLGSGSIihSMETIvGYSPAKSQNMGLMGGlrkhvpi 374
Cdd:PRK06459 262 NGAILVALGLymvtkqliTSIEhfsliTVILYSFAHSVAKTGLFLSSGLQ--EKQSI-TYSKKIRNRWIELGL------- 331
|
330
....*....|....*...
gi 193075821 375 tqitfLLGTLSLCGIPPL 392
Cdd:PRK06459 332 -----TLLASSLSGLLPN 344
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
129-338 |
6.95e-11 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 65.11 E-value: 6.95e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 129 YIFWELVGLCSYLLIGFW--FTRPVAANacqKAFVTNRVGDFGLLLGIL--GFYWVTGSFEFRDLfeifnnliYNNEVNF 204
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWggKKRQYAAT---KFILYTAGSSLFILLAALamAFYGDTPTFDMTAL--------AAKDFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 205 LFVTLC-AVLLFAGAVaKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIFLVARLLPLFR----VIP----YIMYLI 275
Cdd:PRK02546 210 GFQLLCyAGLLIAYGV-KLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLKMGGYALLRmnagMLPdahaQFAPLL 282
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 193075821 276 SVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRS-----ALFHLITHAYSKALLF 338
Cdd:PRK02546 283 IVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLF 348
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
204-430 |
8.20e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 64.88 E-value: 8.20e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 204 FLFVTLCAVLLFAGAvaksaqfPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLplfrvipyIMYLISVIGIIT 282
Cdd:MTH00198 302 YLFITVAILFKLAAA-------PFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTSLVI--------TSKLLLSVAIIS 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 283 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSaLFHLITHAYSKALLFLGSGSIIHSMETIVGYSPAKSQNM 362
Cdd:MTH00198 367 LVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYES-LQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRD 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 363 GLMGG---LRKHVPIT-------QITFLLGT--LSLCGIPPLACFWSKDEILNDSRLYS-----PIF---AIIAWATAGL 422
Cdd:MTH00198 446 GSFGNynlVRRLVDLTilsrgqpYIAFSLAIvfLSLAGIPPLLGFLGKWFILVGSIKIAfssslSIYylvALFAIICTCI 525
|
....*...
gi 193075821 423 TAFYMFRI 430
Cdd:MTH00198 526 SAFYYIRI 533
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
124-428 |
2.69e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 63.02 E-value: 2.69e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 124 NLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFEIfNNLIYNNEVN 203
Cdd:MTH00226 152 DIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQK 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 204 FLFVTLcavllFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFRV-IPYIMYLISVIGII 281
Cdd:MTH00226 231 WIFLGI-----FLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIV 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 282 TVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRSALFHLITHAYSKALLFLgsgsiihsMETIVgYSPAK 358
Cdd:MTH00226 306 GIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLvthDIIGLTGSIFIMLAHGIVSSLLFI--------LVTIL-YDRHH 376
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 359 SQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEILNDSRLYSPIFAIIAWATAGLTAFYMF 428
Cdd:MTH00226 377 TRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
55-390 |
7.62e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 61.62 E-value: 7.62e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 55 SWIINNDFSLDFGYLIDPLTSI------MSILITTVGIMVLIYSDNYMAHDqgylrFFAYMSFFSTSMLGLVTSSNLIQI 128
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVDGVslffilLTTLLIPICILISWKSIKFLFKE-----FLLCLLFLEVLLIGVFSVLDLLLF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 129 YIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSfefRDLFEIFNNLIYNNEVNFLFVT 208
Cdd:MTH00204 138 YILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGT---TDYQILLNIKLPLSIQKWLLVG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 209 LcavllFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFRVIP-YIMYLISVIGIITVLLG 286
Cdd:MTH00204 215 F-----FLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASeYFAPLIVMLSVIAVIYG 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 287 ATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRSALFHLITHAYSKALLFLGSGSIIHSMET-IVGYspaksqnm 362
Cdd:MTH00204 290 SLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTrLIKY-------- 361
|
330 340
....*....|....*....|....*...
gi 193075821 363 glMGGLRKHVPITQITFLLGTLSLCGIP 390
Cdd:MTH00204 362 --YRGLTLTMPLFVIIMLVLSLANMGFP 387
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
1-445 |
2.65e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 59.95 E-value: 2.65e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 1 MLIGAGLILFPTATKSFRRMWAFQSVLLLSIVMVFSIYLSIQQINSSSFYQyvwswiinndfsldFGYLIDPLTSIMSIL 80
Cdd:MTH00206 2 ILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSN--------------LYLSYDPLSSPLVIL 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 81 ITTVGIMVLIYSDNYMaHDQGYLRFFAYMSFFSTSMLGLV---TSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQ 157
Cdd:MTH00206 68 SCWLLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGY 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 158 KAFVTNRVGDFGLLLGILGFYWVTGSFEFrDLFEIFNNLIYNNEVNFLFVTLcavllfaGAVAKSAQFPLHVWLPDA-ME 236
Cdd:MTH00206 147 YFLFYTLIGSLPLLIALLFLQNSLGSLSL-YILYFSKLTTWNNNLWWLACIL-------AFLVKLPLYGVHLWLPKAhVE 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 237 GPTpisalihAATMVAAGIFL------VARLLPLFRVIPYIM-YLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLG 309
Cdd:MTH00206 219 APV-------AGSMVLAGVLLklggygMMRIILILGPSTKLSsYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMS 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 310 YMMLALGMG---SYRSALFHLITHAY-SKALLFLGSgsiihsmetiVGYSPAKSQNMGLMGGLRKHVPITQITFLLGTLS 385
Cdd:MTH00206 292 LVTAGILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQMILPLLSFWWLLFFLA 361
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 386 LCGIPPLACFWSKDEILNDSRLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNVHFQN 445
Cdd:MTH00206 362 NLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLS 421
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
76-334 |
2.12e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 56.98 E-value: 2.12e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 76 IMSILITTVGIMVLIYSDNYMAHDqgylrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANA 155
Cdd:MTH00217 87 ILTALLTPICILISWNSIKFLIKE-----FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQA 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 156 CQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFeifnNLIYNNEV-NFLFvtlcaVLLFAGAVAKSAQFPLHVWLPDA 234
Cdd:MTH00217 162 SYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC----CLKIEKELqYFIF-----LGFFLSLAIKIPKIPFHIWLPQA 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 235 -MEGPTPISALIHAATMVAAGIFLVARLLPLF-RVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLG--- 309
Cdd:MTH00217 233 hVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLpEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGlvt 312
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 193075821 310 ---------------YMMLALGMGSyrSALFHLITHAYSK 334
Cdd:MTH00217 313 lgifshtiqglvaaiFLMLAHGLVS--SALFIAVTFLYER 350
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
226-404 |
2.70e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 56.37 E-value: 2.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 226 PLHVWLPDAMEGPTPISALIHAATMVAAGI---FLVARLLPlfrvipyiMYLISVIGIITVLLGATLALAQKDIKRGLAY 302
Cdd:MTH00112 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLtllLMTSNSLN--------PTLLLTLAILSTLIGGWGGLNQTQLRKIMAF 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 303 STMSQLGYMMLALGMgSYRSALFHLITHAYSKALLFLgsgsIIHSMETivgyspAKSQNMGLMgglRKHVPITQITFLLG 382
Cdd:MTH00112 182 SSIAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTTST------KTLKDMMTS---WTKSPTLNTTLMLT 247
|
170 180
....*....|....*....|..
gi 193075821 383 TLSLCGIPPLACFWSKDEILND 404
Cdd:MTH00112 248 LLSLAGLPPLTGFMPKWLILQE 269
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
203-434 |
3.74e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 55.66 E-value: 3.74e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 203 NFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMylisVIGIIT 282
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLC----VISVLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 283 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLIthaYSKALLFLgsgsiihsmetIVGYSPAKSQNM 362
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLI---YIVSSGFL-----------FFSLWSGDSGSM 220
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 193075821 363 GLMGGLrKHVPITQITFLLGTLSLCGIPPLACFWSKDEILNDSRLYSPIFAIIAWATAGLTA--FYMFRIYLLT 434
Cdd:MTH00144 221 KDLGSL-KPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISlfFYLSVFFSSF 293
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
205-426 |
5.98e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 55.63 E-value: 5.98e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 205 LFVTLCAVLLFAGAVaKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLLPLFR----------VIPYIMY 273
Cdd:PRK12666 208 LLEAGAALLLVVFLI-KAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLFgpeagasagfGQDWLLP 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 274 LisviGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR---SALFHLITHAYSKALLFL----------- 339
Cdd:PRK12666 285 G----GLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrga 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 340 GSGSIIHSMETivgYSPAKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSK----DEILNDSR--------- 406
Cdd:PRK12666 361 AADRLAVTPEL---YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKfallQALLNPPGagaawwlwa 437
|
250 260
....*....|....*....|..
gi 193075821 407 --LYSPIFAIIAWATAGLTAFY 426
Cdd:PRK12666 438 lvLLSGLAALIALTRAGIRLFW 459
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
27-425 |
7.21e-08 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 55.13 E-value: 7.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 27 LLLSIVMVFSIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYL-IDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRF 105
Cdd:MTH00014 13 LLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLsSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTF 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 106 FAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFE 185
Cdd:MTH00014 93 MTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLS 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 186 FRdLFEIFNNLIYnnevnflFVTLCAVLLFAGAVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------V 258
Cdd:MTH00014 173 ML-MSSMEPPSIY-------LMNLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggygL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 259 ARLLPLFrviPYIMYLISVIGIITVLLGATLA----LAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHA 331
Cdd:MTH00014 238 LRMSSLF---MHINKSLSAPFSSISLVGAVITslicIRQPDLKSLIAYSSVGHMGLMTAGIMSNTswgWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 332 YSKALLFLGSGSIihsmetivgYSPAKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSK----DEILNDSRL 407
Cdd:MTH00014 315 LCSSALFALANMT---------YETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEimllTSILSSSLS 385
|
410
....*....|....*...
gi 193075821 408 YSPIFAIIAWATAGLTAF 425
Cdd:MTH00014 386 TAILLAITSFLAAAYSLF 403
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
108-428 |
1.29e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 54.20 E-value: 1.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 108 YMSFFSTSMLGL---VTSSNLIQIYIFWELVGLCSYLLIGFWFTrPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSF 184
Cdd:MTH00200 6 LPLFILSLGLGTlltFSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 185 EFRDLFEIFNnliynnevnflfvtlcAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 264
Cdd:MTH00200 85 GISEMLGPLS----------------ETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPA 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 265 FRVIpyimyLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLgsgsi 344
Cdd:MTH00200 149 LNSN-----ILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL----- 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 345 ihsmetivgYSPAKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEILNDSRLYSPIFAIIAWATAGLTA 424
Cdd:MTH00200 219 ---------LNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLS 289
|
....
gi 193075821 425 FYMF 428
Cdd:MTH00200 290 LFFY 293
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
117-342 |
1.68e-07 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 54.18 E-value: 1.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 117 LGLVTSSNLIQIYIFWELVGLCSYLLIGFW--FTRPVAANacqKAFVTNRVGDFGLLLGIL--GFYwvtGSFEFRDLFEI 192
Cdd:CHL00011 126 IGLFSSRDLLLFFIMWELELIPVYLLLSMWggKKRLYSAT---KFILYTAGGSIFLLIGVLgmGLY---GSNEPTLNFET 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 193 FNNLIYNNEVNFLFVTlcaVLLFAGAVaKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVARLLPLFRV---- 267
Cdd:CHL00011 200 LANQSYPVALEILFYI---GFLIAYAV-KLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMGAYGLIRInmel 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 268 IPYIMYLIS----VIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSY-----RSALFHLITHAYSKALLF 338
Cdd:CHL00011 269 LPHAHSIFSpwlvIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGAILQIISHGFIGAALF 346
|
....
gi 193075821 339 LGSG 342
Cdd:CHL00011 347 FLAG 350
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
105-414 |
4.86e-07 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 52.24 E-value: 4.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 105 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTrPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSF 184
Cdd:MTH00041 6 LIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFS-PRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 185 EFrdlfeifnnLIYNNEVNFLFVTLCAVLlfagavaKSAQFPLHVWLPDAMEGPTPISALIhaatmvAAGIFLVARLLPL 264
Cdd:MTH00041 85 SI---------NGPLNTLSSIIITLALAL-------KLGLAPCHFWFPDVLQGLPFLQGLI------IATWQKIAPLILL 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 265 FRVIPYI-MYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSgs 343
Cdd:MTH00041 143 ISISNLLnSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGN-- 220
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 193075821 344 iIHSMETIvgyspaksqnmGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSK-----DEILNDSRLYSPIFAI 414
Cdd:MTH00041 221 -NFSLSTL-----------SHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCLIQNNSILISIILII 284
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
69-456 |
5.34e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 52.61 E-value: 5.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 69 LIDPLTSIMSILITTVGIMVLIYSDNYMA-----HDQGYLrffAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLI 143
Cdd:MTH00068 57 GIDQISSPLLILTCWLLPLMILASQNHLKnepinRQRTYI---SMLIILQLTLILAFSATELILFYIFFEATLIPTLIII 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 144 GFWFTRPVAANACQK-AFVTnRVGDFGLLLGILGFYWVTGSFEFrDLFEIFNNLIYNNEVNFLFVTLCavlLFAGAVaKS 222
Cdd:MTH00068 134 TRWGNQEERLNAGTYfLFYT-LAGSLPLLIALLILQNSLGSLSL-ILLELMSPMQLMTYTNKIWWLAC---LLAFMV-KM 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 223 AQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFR-VIPYIMYLISVIGIITVLLGATLALAQK 294
Cdd:MTH00068 208 PLYGLHLWLPKAhVEAPI-------AGSMILAAVLLklggygILRISILLTpLSKELSYPFIILALWGVLMTSLICLRQT 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 295 DIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAY-SKALLFLGSGSiihsmetivgYSPAKSQNMGLMGGLRK 370
Cdd:MTH00068 281 DLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCLANTN----------YERTHSRTLLLLRGAQT 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 371 HVPITQITFLLGTLSLCGIPPLACFWSKDEILNDSRLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNVHFqnyggKQ 450
Cdd:MTH00068 351 ILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNHL-----KT 425
|
....*.
gi 193075821 451 KTPFYS 456
Cdd:MTH00068 426 LFPTYT 431
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
103-445 |
1.04e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 51.49 E-value: 1.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 103 LRFFAYMSFFSTSMlglvtssnlIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTG 182
Cdd:MTH00127 103 LQIFLILAFGATEI---------IMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTG 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 183 SFEFRDLfEIFNNLIYNNEVNFLFVTLC--AVLLfagavaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR 260
Cdd:MTH00127 174 TLSMLTL-QYSQPLQLSSWADKLWWAGCllAFLV------KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMR 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 261 LL----PLFRVIPYIMYLISVIGIItvlLGATLALAQKDIKRGLAYSTMSQLGYM---MLALGMGSYRSALFHLITHAYS 333
Cdd:MTH00127 247 MMvmldPLTKELSYPFIILALWGII---MTGSICLRQTDLKSLIAYSSVSHMGLVaggILIQTPWGFTGALILMIAHGLT 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 334 KALLFLGSGSiihsmetivGYSPAKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEILNDSRLYSPIFA 413
Cdd:MTH00127 324 SSALFCLANT---------NYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTL 394
|
330 340 350
....*....|....*....|....*....|..
gi 193075821 414 IIAWATAGLTAFYMFRIYLLTFEGHLNVHFQN 445
Cdd:MTH00127 395 ALTGLGTLITAGYSLYMFLMTQRGPLPDHIIA 426
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
68-313 |
1.77e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 50.94 E-value: 1.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 68 YLIDPLTSIMSILITTVGIMVLIYSDN--------YMAHDQGYLrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCS 139
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 140 YLLIGFWfTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFEIFnnliyNNEVNFLFVTLCAVLLFAGAV 219
Cdd:PRK06591 152 YVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYL-----QEHTNSRIITIAIGFFLIGAI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 220 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLlpLFRVIPY------IMYLISVIGIITVLLGATLALAQ 293
Cdd:PRK06591 226 LKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKF--TYIIIGYetiktaITNFIRPIALATLIIAPYFAYQA 303
|
250 260
....*....|....*....|
gi 193075821 294 KDIKRGLAYSTMSQLGYMML 313
Cdd:PRK06591 304 KNFKNIIIYSCFTQIGYVFL 323
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
203-459 |
8.67e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 48.13 E-value: 8.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 203 NFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFrvipyimYLISVIGIIT 282
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSF-------MGLLICSVLS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 283 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSPAKSQNM 362
Cdd:MTH00197 147 SLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNL 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 363 glmgglrkhvpitqITFLLGTLSLCGIPPLACFWSKDEILND--SRLYSPIFAIIAWATAgLTAFYMFRIYLLTFeghLN 440
Cdd:MTH00197 227 --------------VFLGLSFLSLGGLPPLSGFFLKWLILTSllSSNISLITFMLILSTC-FSLYYYLSLAYKSL---IL 288
|
250
....*....|....*....
gi 193075821 441 VHFQNYGGKQKTPFYSISL 459
Cdd:MTH00197 289 SNWMINFLMKINLLYSGLF 307
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
202-415 |
1.00e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 48.57 E-value: 1.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 202 VNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAA--TMVAAGIflvarLLPLFRVIPYIMYLisviG 279
Cdd:PRK12664 138 QNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLftTKVAALV-----LLLFFSGEEILLFL----G 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 280 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSA-----LFHLITHAYSKALLFLGSGSIIHSMETIvgy 354
Cdd:PRK12664 209 IITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVaigilILQIVLSVVYQTLLFMVADSVINRTRKF--- 285
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 193075821 355 spaksqNMGLMGGLRKhVPITQITFLLGTLSLCGIPPLACFWSKDEILNDSRLYSPIFAII 415
Cdd:PRK12664 286 ------NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLY 339
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
23-332 |
1.68e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 47.67 E-value: 1.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 23 FQSVLLLSIVMVFSIYLSIQQINSSSFYqyvwSWIInndfsldFGYLIDPLTSIMSILITTVGIMVLIYSDNYMahdqgY 102
Cdd:MTH00205 19 KDWSFFSNLLLIGLFFSSFFFSNSFLMT----SFIS-------SSFSFDSLSLPLIMLSFWISLLMVLASYKVF-----K 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 103 LRFFAYMSFFSTSMLGLVT-----SSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGF 177
Cdd:MTH00205 83 SNKNSKLFTVSVIMLLLILilsfsVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 178 YWVTGSFEFRDLFEIFNNLIYNNevnflfvTLCAVLLFAGAVaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIF 256
Cdd:MTH00205 163 NSLNFSLSMFFNFPLNFSDFYLF-------LYWIFLMLAFLV-KLPMYFVHLWLPKAhVEAPV-------SGSMILAGVL 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 257 LVA---RLLPLFRVIPYIMYLISVIGIITVLLGATLA----LAQKDIKRGLAYS-------------TMSQLGY-----M 311
Cdd:MTH00205 228 LKLggyGLIRITSMLYKLNSNFSELFFSISLWGGVMTgmicLRQVDLKSLIAYSsvghmglmvvgvfSNTSWGMngaiiM 307
|
330 340
....*....|....*....|.
gi 193075821 312 MLALGMGSyrSALFHLITHAY 332
Cdd:MTH00205 308 MVAHGLCS--SGMFALANVNY 326
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
49-437 |
2.11e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 47.53 E-value: 2.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 49 FYQYVWSWIINNDFsldfgYLIDPLTSIMSILITTVGIMVLIYSdnymahdQGYLRFFAYMSFFSTSMLGLV-------T 121
Cdd:MTH00150 6 LYSSFSSYESLSEL-----FSVDSMSSLLISLSLWISGLMMLAS-------QKSVKLRNKSSSFSLLVLLLClilvlafS 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 122 SSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFrdlfeIFNNLIYNNE 201
Cdd:MTH00150 74 VSSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM-----LLISSLRKLL 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 202 VNFLFVTLCAVLLFagaVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFRVIPYIMY- 273
Cdd:MTH00150 149 SSMGLWGLLVFLAF---LVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSLSSSSFSi 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 274 LISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAY-SKALLFLGSGSiihsme 349
Cdd:MTH00150 219 FLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFcSSGLFCLANYT------ 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 350 tivgYSPAKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACFWSKDEILNDSRLYSPIFAIIAWATAGLTAFYMFR 429
Cdd:MTH00150 293 ----YEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLY 368
|
....*...
gi 193075821 430 IYLLTFEG 437
Cdd:MTH00150 369 LYTSIQHG 376
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
23-345 |
6.14e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 42.83 E-value: 6.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 23 FQSVLLLSIVMVFSIYLSIQQIN-SSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQG 101
Cdd:MTH00163 6 FMLLFLIPLCFLKNSWWLVQSLLfLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKNNY 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 102 YLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWVT 181
Cdd:MTH00163 86 SNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 182 GSFefrdlfeIFNNLIYNNEVNFLFVtLCAVLLFagaVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFLVAR 260
Cdd:MTH00163 166 GSL-------SFFLLNFFGSLNFLWY-LSMILAF---LVKMPMFFVHLWLPKAhVEAPV-------SGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 261 LLPLFRVIPYIMYLISVIGIITV---LLGATLA----LAQKDIKRGLAYS-------------TMSQLGY-----MMLAL 315
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWIsisLVGGVIVslicLRQVDLKSLIAYSsvahmglvlgglmTFSYWGLmgsllMMIGH 307
|
330 340 350
....*....|....*....|....*....|
gi 193075821 316 GMGSyrSALFHLITHAYSKallfLGSGSII 345
Cdd:MTH00163 308 GLCS--SGLFCLANIIYER----LGSRSLL 331
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
211-460 |
1.04e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 41.69 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 211 AVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfrvipYIMYLISVIGIITVLLGATLA 290
Cdd:MTH00011 91 ALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGLGG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 291 LAQKDIKRGLAYSTMSQLGYMMLALgMGSYRSALFHLITHAYskallflgsgsIIHSMETIVGYSPAKSQNMglMGGLRK 370
Cdd:MTH00011 166 MNQTQLRPLLAYSSIGHMGWMTMIS-VFSPSMAILYFMTYII-----------ITTPLMLLFAYLNAFSTKF--NSKISS 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 371 HVPITQITFLLGTLSLCGIPPLACF---WSKDEILNDSRLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHL-NVHFQNY 446
Cdd:MTH00011 232 MSQTTSMSLFIMLLSLGGLPPFTGFmpkLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTFsSLKSAPY 311
|
250
....*....|....*.
gi 193075821 447 GGKQK--TPFYSISLW 460
Cdd:MTH00011 312 EPKTKilISMCTLSLG 327
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
25-434 |
2.92e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 40.73 E-value: 2.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 25 SVLLLSIVMVFSIYLSIQqINSSSFYQYVWSWIINNDFSLDFGYL-----IDPLTSIMSILITTVGIMVLIYSDNYMAHD 99
Cdd:MTH00044 10 GIAITSWIVPKNKLWPIS-ISQSSLISLLSLFLLNNHWSSSWHNLslslaTDSLSSPLIILSCWLAPLSLLASINHLSNN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 100 QGYLR--FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGF 177
Cdd:MTH00044 89 SPNNQrtFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAI 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 178 YWVTGSfefrdLFEIFNNLIYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIF 256
Cdd:MTH00044 169 YSSSSS-----LSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS-MILAAILLKLGGY 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 257 LVARLLPLFRVIpyIMYLISVIGIITVLLGATLA----LAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLIT 329
Cdd:MTH00044 243 GLIRLINLFSLP--SANNISFILIVFCCWGALITsiicLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGingALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 330 HAYSKALLFlgsgsiihSMETIVgYSPAKSQNMGLMGGLRKHVPITQITFLLGTLSLCGIPPLACfwSKDEILNDSRL-- 407
Cdd:MTH00044 321 HGLVSSALF--------CLANIL-YERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPN--LIGELLIISSIis 389
|
410 420
....*....|....*....|....*..
gi 193075821 408 YSPIFAIIAWATAGLTAFYMFRIYLLT 434
Cdd:MTH00044 390 WSILSFPIIGLATVFGAIYSLLIYQLT 416
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
226-429 |
3.33e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 40.29 E-value: 3.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 226 PLHVWLPDAMEGPTPISALIHA-----ATMvaAGIFLVARLLPLfrvipyimYLISVIGIITVLLGATLALAQKDIKRGL 300
Cdd:MTH00070 110 PFHFWLPEVLQGLDLTTGLILStwqklAPM--ALLIQISHLLNS--------NLLIIMGLLSTLIGGWGGLNQTQLRKIM 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193075821 301 AYSTMSQLGYMMLALGMgSYRSALFHLITHAYSKALLFLgsgSIIHSMETivgyspaksqNMGLMGGLRKHVPITQITFL 380
Cdd:MTH00070 180 AYSSIAHLGWMIIILTF-SPHLTLLNLLIYLIMTSSMFL---MLMNLNST----------NINKLSSSWSKNPTLTSMMM 245
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 193075821 381 LGTLSLCGIPPLACFWSKDEILND-SRLYSPIFAIIAWATAGLTAFYMFR 429
Cdd:MTH00070 246 LTLLSLGGLPPTTGFIPKWLILQElTKQNLTTLATLMALSALLSLFFYLR 295
|
|
| |
