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Conserved domains on  [gi|158121061|gb|ABW16982|]
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cytochrome b, partial (mitochondrion) [Panaspis annobonensis]

Protein Classification

cytochrome b family protein( domain architecture ID 581032)

cytochrome b family protein such as formate dehydrogenase subunit gamma or cytochrome b, a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.

Gene Ontology:  GO:0046872|GO:0016491

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
Cytochrome_b_N super family cl23723
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-227 1.66e-164

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


The actual alignment was detected with superfamily member MTH00119:

Pssm-ID: 474033 [Multi-domain]  Cd Length: 380  Bit Score: 458.98  E-value: 1.66e-164
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYFYKETWNIGVILLLLVMATA 80
Cdd:MTH00119  49 GLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATA 128

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  81 FVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFHFILPFIISGTSMLHLLFLHETGSNN 160
Cdd:MTH00119 129 FVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNN 208

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 158121061 161 PTGLNSNTDKVPFHPYFSYKDLLGLVLLLLFILILALFSPNLLGDPENFTPANPLMTPPHIKPEWYF 227
Cdd:MTH00119 209 PLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYF 275
 
Name Accession Description Interval E-value
CYTB MTH00119
cytochrome b; Provisional
 1-227 1.66e-164

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 458.98  E-value: 1.66e-164
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYFYKETWNIGVILLLLVMATA 80
Cdd:MTH00119  49 GLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATA 128

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  81 FVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFHFILPFIISGTSMLHLLFLHETGSNN 160
Cdd:MTH00119 129 FVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNN 208

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 158121061 161 PTGLNSNTDKVPFHPYFSYKDLLGLVLLLLFILILALFSPNLLGDPENFTPANPLMTPPHIKPEWYF 227
Cdd:MTH00119 209 PLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYF 275
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-227 2.11e-88

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 266.27  E-value: 2.11e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYfyKE----TWNIGVILLLLV 76
Cdd:COG1290   57 GIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAY--KKprelNWIIGVLLLLLT 134

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  77 MATAFVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFH-FILPFIISGTSMLHLLFLHE 155
Cdd:COG1290  135 MAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHR 214

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 158121061 156 TGSNNPTG----LNSNTDKVPFHPYFSYKDLLGLVLLLLFILILALFSPNllGDPENFTPANPLMTPPHIKPEWYF 227
Cdd:COG1290  215 HGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLATPAHIQPDWYF 288
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-159 1.04e-79

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 237.27  E-value: 1.04e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYF--YKETWNIGVILLLLVMA 78
Cdd:cd00284   40 GVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMA 119

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  79 TAFVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFHFILPFIISGTSMLHLLFLHETGS 158
Cdd:cd00284  120 TAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGS 199


                 .
gi 158121061 159 N 159
Cdd:cd00284  200 S 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
1-157 5.16e-76

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 227.65  E-value: 5.16e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061    1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYFY--KETWNIGVILLLLVMA 78
Cdd:pfam00033  31 GVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGGFSYprELTWVIGVILLVLTMS 110

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 158121061   79 TAFVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFHFILPFIISGTSMLHLLFLHETG 157
Cdd:pfam00033 111 TAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
 
Name Accession Description Interval E-value
CYTB MTH00119
cytochrome b; Provisional
 1-227 1.66e-164

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 458.98  E-value: 1.66e-164
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYFYKETWNIGVILLLLVMATA 80
Cdd:MTH00119  49 GLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATA 128

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  81 FVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFHFILPFIISGTSMLHLLFLHETGSNN 160
Cdd:MTH00119 129 FVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNN 208

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 158121061 161 PTGLNSNTDKVPFHPYFSYKDLLGLVLLLLFILILALFSPNLLGDPENFTPANPLMTPPHIKPEWYF 227
Cdd:MTH00119 209 PLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYF 275
CYTB MTH00131
cytochrome b; Provisional
 1-227 4.01e-161

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 450.26  E-value: 4.01e-161
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYFYKETWNIGVILLLLVMATA 80
Cdd:MTH00131  48 GLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTA 127

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  81 FVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFHFILPFIISGTSMLHLLFLHETGSNN 160
Cdd:MTH00131 128 FVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNN 207

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 158121061 161 PTGLNSNTDKVPFHPYFSYKDLLGLVLLLLFILILALFSPNLLGDPENFTPANPLMTPPHIKPEWYF 227
Cdd:MTH00131 208 PLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYF 274
CYTB MTH00074
cytochrome b; Provisional
 1-227 1.94e-159

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 446.05  E-value: 1.94e-159
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYFYKETWNIGVILLLLVMATA 80
Cdd:MTH00074  49 GLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATA 128

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  81 FVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFHFILPFIISGTSMLHLLFLHETGSNN 160
Cdd:MTH00074 129 FVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNN 208

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 158121061 161 PTGLNSNTDKVPFHPYFSYKDLLGLVLLLLFILILALFSPNLLGDPENFTPANPLMTPPHIKPEWYF 227
Cdd:MTH00074 209 PTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYF 275
CYTB MTH00100
cytochrome b; Provisional
 1-227 7.84e-154

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 431.75  E-value: 7.84e-154
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYFYKETWNIGVILLLLVMATA 80
Cdd:MTH00100  48 GLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATA 127

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  81 FVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFHFILPFIISGTSMLHLLFLHETGSNN 160
Cdd:MTH00100 128 FMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNN 207

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 158121061 161 PTGLNSNTDKVPFHPYFSYKDLLGLVLLLLFILILALFSPNLLGDPENFTPANPLMTPPHIKPEWYF 227
Cdd:MTH00100 208 PSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYF 274
CYTB MTH00156
cytochrome b; Provisional
 1-227 6.69e-152

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 426.12  E-value: 6.69e-152
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYFYKETWNIGVILLLLVMATA 80
Cdd:MTH00156  38 GLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATA 117

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  81 FVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFHFILPFIISGTSMLHLLFLHETGSNN 160
Cdd:MTH00156 118 FLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNN 197

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 158121061 161 PTGLNSNTDKVPFHPYFSYKDLLGLVLLLLFILILALFSPNLLGDPENFTPANPLMTPPHIKPEWYF 227
Cdd:MTH00156 198 PLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIPANPLVTPVHIQPEWYF 264
CYTB MTH00191
cytochrome b; Provisional
 1-227 1.34e-149

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 420.48  E-value: 1.34e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYFYKETWNIGVILLLLVMATA 80
Cdd:MTH00191  45 GLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATA 124

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  81 FVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFHFILPFIISGTSMLHLLFLHETGSNN 160
Cdd:MTH00191 125 FLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNN 204

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 158121061 161 PTGLNSNTDKVPFHPYFSYKDLLGLVLLLLFILILALFSPNLLGDPENFTPANPLMTPPHIKPEWYF 227
Cdd:MTH00191 205 PLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPENFIPANPLVTPVHIKPEWYF 271
CYTB MTH00145
cytochrome b; Provisional
 1-227 1.32e-142

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 403.52  E-value: 1.32e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYFYKETWNIGVILLLLVMATA 80
Cdd:MTH00145  49 GLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTA 128

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  81 FVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFHFILPFIISGTSMLHLLFLHETGSNN 160
Cdd:MTH00145 129 FLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNN 208

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 158121061 161 PTGLNSNTDKVPFHPYFSYKDLLGLVLLLLFILILALFSPNLLGDPENFTPANPLMTPPHIKPEWYF 227
Cdd:MTH00145 209 PLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYF 275
CYTB MTH00016
cytochrome b; Validated
 1-227 9.27e-137

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 388.65  E-value: 9.27e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYFYKETWNIGVILLLLVMATA 80
Cdd:MTH00016  49 GLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATA 128

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  81 FVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFHFILPFIISGTSMLHLLFLHETGSNN 160
Cdd:MTH00016 129 FLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNN 208

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 158121061 161 PTGLNSNTDKVPFHPYFSYKDLLGLVLLLLFILILALFSPNLLGDPENFTPANPLMTPPHIKPEWYF 227
Cdd:MTH00016 209 PLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYF 275
CYTB MTH00034
cytochrome b; Validated
 1-227 7.93e-136

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 386.37  E-value: 7.93e-136
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYFYKETWNIGVILLLLVMATA 80
Cdd:MTH00034  48 GIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTA 127

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  81 FVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFHFILPFIISGTSMLHLLFLHETGSNN 160
Cdd:MTH00034 128 FVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNN 207

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 158121061 161 PTGLNSNTDKVPFHPYFSYKDLLGLVLLLLFILILALFSPNLLGDPENFTPANPLMTPPHIKPEWYF 227
Cdd:MTH00034 208 PTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPENFIPANPLVTPPHIQPEWYF 274
CYTB MTH00224
cytochrome b; Provisional
 1-227 9.62e-117

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 338.05  E-value: 9.62e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYFYKETWNIGVILLLLVMATA 80
Cdd:MTH00224  49 GLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATA 128

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  81 FVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFHFILPFIISGTSMLHLLFLHETGSNN 160
Cdd:MTH00224 129 FLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNN 208

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 158121061 161 PTGLNSNTDKVPFHPYFSYKDLLGLVLLLLFILILALFSPNLLGDPENFTPANPLMTPPHIKPEWYF 227
Cdd:MTH00224 209 PIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYF 275
CYTB MTH00022
cytochrome b; Validated
 1-227 3.26e-112

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 326.27  E-value: 3.26e-112
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYFYKETWNIGVILLLLVMATA 80
Cdd:MTH00022  47 GCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATA 126

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  81 FVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFHFILPFIISGTSMLHLLFLHETGSNN 160
Cdd:MTH00022 127 FMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNN 206

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 158121061 161 PTGLNSNTDKVPFHPYFSYKDLLGLVLLLLFILILALFSPNLLGDPENFTPANPLMTPPHIKPEWYF 227
Cdd:MTH00022 207 PIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFIQANSLVTPVHIQPEWYF 273
CYTB MTH00053
cytochrome b; Provisional
 1-227 1.56e-110

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 322.04  E-value: 1.56e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYFYKETWNIGVILLLLVMATA 80
Cdd:MTH00053  49 GIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTA 128

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  81 FVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFHFILPFIISGTSMLHLLFLHETGSNN 160
Cdd:MTH00053 129 FIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNN 208

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 158121061 161 PTGLNSNTDKVPFHPYFSYKDLLGLVLLLLFILILALFSPNLLGDPENFTPANPLMTPPHIKPEWYF 227
Cdd:MTH00053 209 PIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYF 275
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-227 2.11e-88

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 266.27  E-value: 2.11e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYfyKE----TWNIGVILLLLV 76
Cdd:COG1290   57 GIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAY--KKprelNWIIGVLLLLLT 134

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  77 MATAFVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFH-FILPFIISGTSMLHLLFLHE 155
Cdd:COG1290  135 MAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHR 214

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 158121061 156 TGSNNPTG----LNSNTDKVPFHPYFSYKDLLGLVLLLLFILILALFSPNllGDPENFTPANPLMTPPHIKPEWYF 227
Cdd:COG1290  215 HGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLATPAHIQPDWYF 288
CYTB MTH00033
cytochrome b; Provisional
 1-227 2.24e-85

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 258.33  E-value: 2.24e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYFYKETWNIGVILLLLVMATA 80
Cdd:MTH00033  45 GVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTA 124

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  81 FVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFHFILPFIISGTSMLHLLFLHETGSNN 160
Cdd:MTH00033 125 FIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNE 204

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 158121061 161 PTGLNSNTDKVPFHPYFSYKDLLGLVLLLLFILILALFS--PNLLGDPENFTPANPLMTPPHIKPEWYF 227
Cdd:MTH00033 205 PLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriETLLQDPENFIQANPLVTPVHIQPEWYF 273
CYTB MTH00086
cytochrome b; Provisional
 1-227 1.75e-82

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 249.86  E-value: 1.75e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYFYKETWNIGVILLLLVMATA 80
Cdd:MTH00086  37 GTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEA 116

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  81 FVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFHFILPFIISGTSMLHLLFLHETGSNN 160
Cdd:MTH00086 117 FMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTS 196

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 158121061 161 PTGLNSNTDKVPFHPYFSYKDlLGLVLLLLFILILALFSPNLLGDPENFTPANPLMTPPHIKPEWYF 227
Cdd:MTH00086 197 SLYCHGDYDKICFGPEYWNKD-AYNIIFWLVFIIFSLFYPFNLGDPEMFIEADPMMSPVHIVPEWYF 262
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-159 1.04e-79

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 237.27  E-value: 1.04e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYF--YKETWNIGVILLLLVMA 78
Cdd:cd00284   40 GVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMA 119

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  79 TAFVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFHFILPFIISGTSMLHLLFLHETGS 158
Cdd:cd00284  120 TAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGS 199


                 .
gi 158121061 159 N 159
Cdd:cd00284  200 S 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
1-157 5.16e-76

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 227.65  E-value: 5.16e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061    1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYFY--KETWNIGVILLLLVMA 78
Cdd:pfam00033  31 GVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGGFSYprELTWVIGVILLVLTMS 110

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 158121061   79 TAFVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFHFILPFIISGTSMLHLLFLHETG 157
Cdd:pfam00033 111 TAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
CYTB MTH00046
cytochrome b; Validated
 1-227 2.40e-69

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 216.39  E-value: 2.40e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYFYKETWNIGVILLLLVMATA 80
Cdd:MTH00046  39 GVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEA 118

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  81 FVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFHFILPFIISGTSMLHLLFLHETGSNN 160
Cdd:MTH00046 119 FLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSN 198

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 158121061 161 PTGL-NSNTDKVPFHPYFSYKDLLGLVLLLLFILILALFSPNLLGDPENFTPANPLMTPPHIKPEWYF 227
Cdd:MTH00046 199 PLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAYLEADPLVTPVSIKPEWYF 266
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
41-206 4.91e-47

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 153.17  E-value: 4.91e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   41 SMFFICLYLHIGRGLYYGSYFYKE--TWNIGVILLLLVMATAFVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIW 118
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  119 GGFSVDNATLTRFFSFHF-ILPFIISGTSMLHLLFLHETGSNNPTGLNSNTDKVPFHPYFSYKDLLGLVLLLLFILILAL 197
Cdd:pfam13631  81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160


                  ....*....
gi 158121061  198 FSPNLLGDP 206
Cdd:pfam13631 161 INPIWLGGP 169
PRK03735 PRK03735
cytochrome b6; Provisional
 1-161 6.19e-35

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 123.67  E-value: 6.19e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRGLYYGSYFYKE--TWNIGVILLLLVMA 78
Cdd:PRK03735  59 GMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRelNWVVGVLIFFVTVG 138

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  79 TAFVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFH-FILPFIISGTSMLHLLFLHETG 157
Cdd:PRK03735 139 LGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWALAVLMLAHFLMIRKQG 218


                 ....
gi 158121061 158 SNNP 161
Cdd:PRK03735 219 ISGP 222
petB CHL00070
cytochrome b6
 1-161 1.37e-30

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 112.51  E-value: 1.37e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061   1 GLFLAMHYTADISSAFSSIAHITRDVQYGWFIRNLHANGASMFFICLYLHIGRgLYYGSYFYKE---TWNIGVILLLLVM 77
Cdd:CHL00070  51 GFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFR-VYLTGGFKKPrelTWVTGVVLAVLTV 129

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158121061  78 ATAFVGYVLPWGQMSFWGATVITNLLSAVPYIGITLVEWIWGGFSVDNATLTRFFSFH-FILPFIISGTSMLHLLFLHET 156
Cdd:CHL00070 130 SFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSLHtFVLPLLTAVFMLMHFLMIRKQ 209


                 ....*
gi 158121061 157 GSNNP 161
Cdd:CHL00070 210 GISGP 214
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 160-227 1.49e-17

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 76.15  E-value: 1.49e-17
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 158121061 160 NPTGLNSNTDKVPFHPYFSYKDLLGLVLLLLFILILALFSPNLLGDPENFTPANPLMTPPHIKPEWYF 227
Cdd:cd00290    1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYF 68
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
211-227 3.07e-06

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 44.39  E-value: 3.07e-06
                          10
                  ....*....|....*..
gi 158121061  211 PANPLMTPPHIKPEWYF 227
Cdd:pfam00032   1 PANPLVTPAHIVPEWYF 17
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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