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Conserved domains on  [gi|157381758|gb|ABV46700|]
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NADH dehydrogenase subunit 3, partial (mitochondrion) [Chaetodon multicinctus]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 9.54e-70

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 204.00  E-value: 9.54e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   1 MNLITAIFGISITLSLILIVVAFWLPLMGPDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 157381758  81 QLASPLLTFLWASAVLALLTLGLIYEWFQGGLEWA 115
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWA 115
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 9.54e-70

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 204.00  E-value: 9.54e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   1 MNLITAIFGISITLSLILIVVAFWLPLMGPDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 157381758  81 QLASPLLTFLWASAVLALLTLGLIYEWFQGGLEWA 115
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWA 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-113 5.47e-28

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 97.88  E-value: 5.47e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   19 IVVAFWLPLMGPDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLlpLPWGDQLASPLLTFLWASAV-LA 97
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFGFVEMLIfIA 78

                          90
                  ....*....|....*.
gi 157381758   98 LLTLGLIYEWFQGGLE 113
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-114 5.21e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 85.94  E-value: 5.21e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   4 ITAIFGISITLSLILIVVAFWLPLMGPDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLlpLPWGDQLA 83
Cdd:COG0838    8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85

                         90       100       110
                 ....*....|....*....|....*....|..
gi 157381758  84 S-PLLTFLWASAVLALLTLGLIYEWFQGGLEW 114
Cdd:COG0838   86 ElGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 9.54e-70

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 204.00  E-value: 9.54e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   1 MNLITAIFGISITLSLILIVVAFWLPLMGPDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 157381758  81 QLASPLLTFLWASAVLALLTLGLIYEWFQGGLEWA 115
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWA 115
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-115 6.87e-55

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 166.71  E-value: 6.87e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   3 LITAIFGISITLSLILIVVAFWLPLMGPDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLLPLPWGDQL 82
Cdd:MTH00069   1 LIMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 157381758  83 ASPLLTFLWASAVLALLTLGLIYEWFQGGLEWA 115
Cdd:MTH00069  81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWA 113
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-115 9.24e-52

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 158.51  E-value: 9.24e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   2 NLITAIFGISITLSLILIVVAFWLPLMGPDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLLPLPWGDQ 81
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 157381758  82 LASPLLTFLWASAVLALLTLGLIYEWFQGGLEWA 115
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 2.33e-45

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 142.39  E-value: 2.33e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   1 MNLITAIFgISITLSLILIVVAFWLPLMGPDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00106   1 MNLMLTLL-TNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 157381758  81 QLASPLLTFLWASAVLALLTLGLIYEWFQGGLEWA 115
Cdd:MTH00106  80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWT 114
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-114 7.58e-39

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 125.78  E-value: 7.58e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   1 MNLITAIFGISITLSLILIVVAFWLPLMGPDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 157381758  81 QLASPllTFLWASAVLALLTLGLIYEWFQGGLEW 114
Cdd:MTH00203  81 QLSSL--SLLLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 1.34e-37

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 122.78  E-value: 1.34e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   1 MNLITAIFGISITLSLILIVVAFWLPLMGPDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00042   1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 157381758  81 QLASPLLTFLWASAVLALLTLGLIYEWFQGGLEWA 115
Cdd:MTH00042  81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWA 115
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-114 1.34e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 99.85  E-value: 1.34e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   3 LITAIFGISITLSLILIVVAFWL-PLMGPDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLLPLPWGDQ 81
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 157381758  82 LASPLLTFLWASAVLALLTLGLIYEWFQGGLEW 114
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-113 5.47e-28

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 97.88  E-value: 5.47e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   19 IVVAFWLPLMGPDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLlpLPWGDQLASPLLTFLWASAV-LA 97
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFGFVEMLIfIA 78

                          90
                  ....*....|....*.
gi 157381758   98 LLTLGLIYEWFQGGLE 113
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-115 1.08e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 97.62  E-value: 1.08e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   1 MNLITAIFGISITLSLILIVVAFWL-PLMGPDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLLPLPWG 79
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLsKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 157381758  80 DQLASPLLTFLWASAVLALLTLGLIYEWFQGGLEWA 115
Cdd:MTH00148  81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 10-114 6.96e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 90.54  E-value: 6.96e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758  10 ISITLSLILIVVAFWLPLMGPDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLlpLPWGDQLASPLLTF 89
Cdd:MTH00055  14 FSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYNQIGLFG 91

                         90       100
                 ....*....|....*....|....*.
gi 157381758  90 LWASAV-LALLTLGLIYEWFQGGLEW 114
Cdd:MTH00055  92 FWVMYLfLIILTIGLIYEWVKGGLEW 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-115 1.17e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 90.05  E-value: 1.17e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   1 MNLITAIFGISITLSLILIVVAFWLPLMG-PDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLLPLPWG 79
Cdd:MTH00202   1 MLLILFMSILSILISSLLFLVSWMLSFRSlMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 157381758  80 DQLASPLLTFLWASAVLALLTLGLIYEWFQGGLEWA 115
Cdd:MTH00202  81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWV 116
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 8-115 2.07e-24

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 89.54  E-value: 2.07e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   8 FGISITLSLILIVVAFWLPLMGPDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLlpLPWGDQL-ASPL 86
Cdd:PRK06602  15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFrEIGW 92

                         90       100
                 ....*....|....*....|....*....
gi 157381758  87 LTFLWASAVLALLTLGLIYEWFQGGLEWA 115
Cdd:PRK06602  93 LGFVEAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-115 5.58e-24

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 88.38  E-value: 5.58e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   1 MNLITAIFGISITLSLILIVVAFWLPLMGP-DHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLLPLPWG 79
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAWVLAARSTaDREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 157381758  80 DQLASPLLTFLWASAVLALLTLGLIYEWFQGGLEWA 115
Cdd:MTH00012  81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 10-114 8.58e-24

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 87.81  E-value: 8.58e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758  10 ISITLSLILIVVAFWLPLMGPDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLLPLPWGDQLASPlLTF 89
Cdd:MTH00018   9 FSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAP-FGF 87

                         90       100
                 ....*....|....*....|....*
gi 157381758  90 LWASAVLALLTLGLIYEWFQGGLEW 114
Cdd:MTH00018  88 WTMVGFLFILTLGLIYEWIKGGLEW 112
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-114 5.21e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 85.94  E-value: 5.21e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   4 ITAIFGISITLSLILIVVAFWLPLMGPDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLlpLPWGDQLA 83
Cdd:COG0838    8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85

                         90       100       110
                 ....*....|....*....|....*....|..
gi 157381758  84 S-PLLTFLWASAVLALLTLGLIYEWFQGGLEW 114
Cdd:COG0838   86 ElGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 5-114 1.02e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 72.66  E-value: 1.02e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   5 TAIFGISITLSLILIVVAFWLPLMG---PDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLlpLPWG-- 79
Cdd:MTH00030  11 STLLGVGIILLLVSISFTLGNSRIGltkPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSiv 88

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 157381758  80 -DQLAspLLTFLWASAVLALLTLGLIYEWFQGGLEW 114
Cdd:MTH00030  89 fNQLN--LFSFWIVYTFLIVLAIGLAYEWIKGGLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 7-114 4.10e-11

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 55.38  E-value: 4.10e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   7 IFGISITLSLILIVVAFWLP-LMGP---DHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLlpLPWG--- 79
Cdd:CHL00022   9 IFWAFLIISSLIPILAFLISgLLAPiskGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAmsf 86

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 157381758  80 DQLAspLLTFLWASAVLALLTLGLIYEWFQGGLEW 114
Cdd:CHL00022  87 DVLG--VSAFIEALIFVLILIVGLVYAWRKGALEW 119
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 1-114 3.31e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 53.14  E-value: 3.31e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   1 MNLITAIF---GISITLSLILIVVAFWLPLMGPDHEKLSPYECGFDPLGTARLP--FSLRFFLIAILFLLFDLEIALLLP 75
Cdd:PRK07928   1 MNVYIPILvlgALAAAFAVVSVVVASLVGPKRYNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 157381758  76 lpWGDQLASpLLTFLWASAVLALLTLGL--IYEWFQGGLEW 114
Cdd:PRK07928  81 --WAVSFDA-LGVFGLVEMALFMLTVFVayAYVWRRGGLEW 118
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
3-114 6.58e-09

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 49.74  E-value: 6.58e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   3 LITAIF-GISITLSLILIVVAFWLPLMGPDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLLPlpWG-- 79
Cdd:PRK07756  10 MIVLIFlLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAva 87

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 157381758  80 -DQLAspLLTFLWASAVLALLTLGLIYEWFQGGLEW 114
Cdd:PRK07756  88 yDKLG--LFALIEMLIFVVMLLVGLAYAWKKKVLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
34-114 1.15e-07

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 46.58  E-value: 1.15e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758  34 KLSPYECGFDPLGTARlPFSLRFFLIAILFLLFDLEIALLLPLPWGDQLASpLLTFLWASAVLALLTLGLIYEWFQGGLE 113
Cdd:PRK08489  47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMFPWAVDFKLLG-LFGLIEMLLFIVLLTIGFIYAWKKGALE 124


                 .
gi 157381758 114 W 114
Cdd:PRK08489 125 W 125
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 7-114 4.85e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 44.50  E-value: 4.85e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   7 IFGISITLSLILIVVAFWLPLMGPDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLLPLPWGDqLASPL 86
Cdd:MTH00092   7 VFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVSD-FSSLI 85

                         90       100
                 ....*....|....*....|....*...
gi 157381758  87 LTFLWASAVLAlltlGLIYEWFQGGLEW 114
Cdd:MTH00092  86 SFFMLMIFIFF----GFYMEWWYGKLIW 109
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 7-114 3.24e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 39.88  E-value: 3.24e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157381758   7 IFGISITLSLILIVVAFWLPLMGPDHEKL-----SPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLLPLPWGDQ 81
Cdd:MTH00060   5 LFVFFVFFLLFLVIYFFHSGLWNNKIYSGgfswvSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPFQGL 84

                         90       100       110
                 ....*....|....*....|....*....|...
gi 157381758  82 LASpllTFLWASAVLALLTLGLIYEWFQGGLEW 114
Cdd:MTH00060  85 LFY---NFWYYYFFLLLLFLGFVVELFSGYVRW 114
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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